@researai/deepscientist 1.5.16 → 1.6.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (896) hide show
  1. package/AGENTS.md +309 -130
  2. package/AISB/catalog/aisb.b1.agentic_coding.yaml +244 -0
  3. package/AISB/catalog/aisb.b10.climate_earth.yaml +235 -0
  4. package/AISB/catalog/aisb.b11.model_efficiency.yaml +231 -0
  5. package/AISB/catalog/aisb.b12.embodied_ai.yaml +238 -0
  6. package/AISB/catalog/aisb.b2.agent_systems.yaml +229 -0
  7. package/AISB/catalog/aisb.b3.self_evolving_rl.yaml +237 -0
  8. package/AISB/catalog/aisb.b4.lm_reasoning.yaml +240 -0
  9. package/AISB/catalog/aisb.b5.math_proof.yaml +235 -0
  10. package/AISB/catalog/aisb.b6.research_process.yaml +243 -0
  11. package/AISB/catalog/aisb.b7.multimodal_fusion.yaml +232 -0
  12. package/AISB/catalog/aisb.b8.lifesci_drug.yaml +275 -0
  13. package/AISB/catalog/aisb.b9.material_science.yaml +237 -0
  14. package/AISB/catalog/aisb.t3.001_savvy.yaml +159 -0
  15. package/AISB/catalog/aisb.t3.001_savvy.zh.yaml +121 -0
  16. package/AISB/catalog/aisb.t3.002_pinet.yaml +189 -0
  17. package/AISB/catalog/aisb.t3.002_pinet.zh.yaml +130 -0
  18. package/AISB/catalog/aisb.t3.004_decentralattn.yaml +184 -0
  19. package/AISB/catalog/aisb.t3.004_decentralattn.zh.yaml +153 -0
  20. package/AISB/catalog/aisb.t3.005_tsae.yaml +193 -0
  21. package/AISB/catalog/aisb.t3.005_tsae.zh.yaml +139 -0
  22. package/AISB/catalog/aisb.t3.006_physense.yaml +194 -0
  23. package/AISB/catalog/aisb.t3.006_physense.zh.yaml +118 -0
  24. package/AISB/catalog/aisb.t3.007_reasoningiqa.yaml +169 -0
  25. package/AISB/catalog/aisb.t3.007_reasoningiqa.zh.yaml +133 -0
  26. package/AISB/catalog/aisb.t3.008_meanflows.yaml +188 -0
  27. package/AISB/catalog/aisb.t3.008_meanflows.zh.yaml +140 -0
  28. package/AISB/catalog/aisb.t3.009_scoremissing.yaml +179 -0
  29. package/AISB/catalog/aisb.t3.009_scoremissing.zh.yaml +119 -0
  30. package/AISB/catalog/aisb.t3.010_suitabilityfilter.yaml +221 -0
  31. package/AISB/catalog/aisb.t3.010_suitabilityfilter.zh.yaml +141 -0
  32. package/AISB/catalog/aisb.t3.011_osd.yaml +206 -0
  33. package/AISB/catalog/aisb.t3.011_osd.zh.yaml +163 -0
  34. package/AISB/catalog/aisb.t3.012_efficientqat.yaml +206 -0
  35. package/AISB/catalog/aisb.t3.012_efficientqat.zh.yaml +159 -0
  36. package/AISB/catalog/aisb.t3.013_appl.yaml +152 -0
  37. package/AISB/catalog/aisb.t3.013_appl.zh.yaml +126 -0
  38. package/AISB/catalog/aisb.t3.014_piguard.yaml +207 -0
  39. package/AISB/catalog/aisb.t3.014_piguard.zh.yaml +164 -0
  40. package/AISB/catalog/aisb.t3.015_frspec.yaml +209 -0
  41. package/AISB/catalog/aisb.t3.015_frspec.zh.yaml +163 -0
  42. package/AISB/catalog/aisb.t3.016_mathfusion.yaml +166 -0
  43. package/AISB/catalog/aisb.t3.016_mathfusion.zh.yaml +145 -0
  44. package/AISB/catalog/aisb.t3.017_multimodalglp.yaml +171 -0
  45. package/AISB/catalog/aisb.t3.017_multimodalglp.zh.yaml +122 -0
  46. package/AISB/catalog/aisb.t3.018_cotsynth.yaml +206 -0
  47. package/AISB/catalog/aisb.t3.018_cotsynth.zh.yaml +162 -0
  48. package/AISB/catalog/aisb.t3.019_dyscaleut.yaml +211 -0
  49. package/AISB/catalog/aisb.t3.019_dyscaleut.zh.yaml +148 -0
  50. package/AISB/catalog/aisb.t3.020_aristotle.yaml +173 -0
  51. package/AISB/catalog/aisb.t3.020_aristotle.zh.yaml +119 -0
  52. package/AISB/catalog/aisb.t3.021_tokenrecycling.yaml +160 -0
  53. package/AISB/catalog/aisb.t3.021_tokenrecycling.zh.yaml +129 -0
  54. package/AISB/catalog/aisb.t3.022_chainofreasoning.yaml +204 -0
  55. package/AISB/catalog/aisb.t3.022_chainofreasoning.zh.yaml +161 -0
  56. package/AISB/catalog/aisb.t3.023_guidedembed.yaml +211 -0
  57. package/AISB/catalog/aisb.t3.023_guidedembed.zh.yaml +189 -0
  58. package/AISB/catalog/aisb.t3.024_outputcentric.yaml +148 -0
  59. package/AISB/catalog/aisb.t3.024_outputcentric.zh.yaml +131 -0
  60. package/AISB/catalog/aisb.t3.025_deeper.yaml +143 -0
  61. package/AISB/catalog/aisb.t3.025_deeper.zh.yaml +116 -0
  62. package/AISB/catalog/aisb.t3.026_gartkg.yaml +195 -0
  63. package/AISB/catalog/aisb.t3.026_gartkg.zh.yaml +127 -0
  64. package/AISB/catalog/aisb.t3.027_citeeval.yaml +182 -0
  65. package/AISB/catalog/aisb.t3.027_citeeval.zh.yaml +135 -0
  66. package/AISB/catalog/aisb.t3.028_sbam.yaml +206 -0
  67. package/AISB/catalog/aisb.t3.028_sbam.zh.yaml +166 -0
  68. package/AISB/catalog/aisb.t3.029_cdqgeoembed.yaml +224 -0
  69. package/AISB/catalog/aisb.t3.029_cdqgeoembed.zh.yaml +142 -0
  70. package/AISB/catalog/aisb.t3.030_processrm.yaml +211 -0
  71. package/AISB/catalog/aisb.t3.030_processrm.zh.yaml +166 -0
  72. package/AISB/catalog/aisb.t3.031_circuitstability.yaml +172 -0
  73. package/AISB/catalog/aisb.t3.031_circuitstability.zh.yaml +134 -0
  74. package/AISB/catalog/aisb.t3.032_ptsolver.yaml +169 -0
  75. package/AISB/catalog/aisb.t3.032_ptsolver.zh.yaml +135 -0
  76. package/AISB/catalog/aisb.t3.033_gcse.yaml +144 -0
  77. package/AISB/catalog/aisb.t3.033_gcse.zh.yaml +126 -0
  78. package/AISB/catalog/aisb.t3.034_ensemblewm.yaml +183 -0
  79. package/AISB/catalog/aisb.t3.034_ensemblewm.zh.yaml +146 -0
  80. package/AISB/catalog/aisb.t3.035_moralvalueswa.yaml +207 -0
  81. package/AISB/catalog/aisb.t3.035_moralvalueswa.zh.yaml +165 -0
  82. package/AISB/catalog/aisb.t3.036_weakstrongpref.yaml +210 -0
  83. package/AISB/catalog/aisb.t3.036_weakstrongpref.zh.yaml +194 -0
  84. package/AISB/catalog/aisb.t3.037_dementiamask.yaml +172 -0
  85. package/AISB/catalog/aisb.t3.037_dementiamask.zh.yaml +132 -0
  86. package/AISB/catalog/aisb.t3.038_tinysam.yaml +284 -0
  87. package/AISB/catalog/aisb.t3.038_tinysam.zh.yaml +240 -0
  88. package/AISB/catalog/aisb.t3.039_calf.yaml +224 -0
  89. package/AISB/catalog/aisb.t3.039_calf.zh.yaml +194 -0
  90. package/AISB/catalog/aisb.t3.040_graniteguardian.yaml +199 -0
  91. package/AISB/catalog/aisb.t3.040_graniteguardian.zh.yaml +174 -0
  92. package/AISB/catalog/aisb.t3.041_amdm.yaml +149 -0
  93. package/AISB/catalog/aisb.t3.041_amdm.zh.yaml +137 -0
  94. package/AISB/catalog/aisb.t3.042_xpatch.yaml +216 -0
  95. package/AISB/catalog/aisb.t3.042_xpatch.zh.yaml +182 -0
  96. package/AISB/catalog/aisb.t3.043_vhm.yaml +268 -0
  97. package/AISB/catalog/aisb.t3.043_vhm.zh.yaml +193 -0
  98. package/AISB/catalog/aisb.t3.044_rgvi.yaml +224 -0
  99. package/AISB/catalog/aisb.t3.044_rgvi.zh.yaml +176 -0
  100. package/AISB/catalog/aisb.t3.045_pslstm.yaml +203 -0
  101. package/AISB/catalog/aisb.t3.045_pslstm.zh.yaml +179 -0
  102. package/AISB/catalog/aisb.t3.046_nonstatts.yaml +208 -0
  103. package/AISB/catalog/aisb.t3.046_nonstatts.zh.yaml +194 -0
  104. package/AISB/catalog/aisb.t3.047_timepfn.yaml +156 -0
  105. package/AISB/catalog/aisb.t3.047_timepfn.zh.yaml +124 -0
  106. package/AISB/catalog/aisb.t3.048_proxyspex.yaml +148 -0
  107. package/AISB/catalog/aisb.t3.048_proxyspex.zh.yaml +125 -0
  108. package/AISB/catalog/aisb.t3.049_hogwildinference.yaml +183 -0
  109. package/AISB/catalog/aisb.t3.049_hogwildinference.zh.yaml +138 -0
  110. package/AISB/catalog/aisb.t3.050_causalpfn.yaml +214 -0
  111. package/AISB/catalog/aisb.t3.050_causalpfn.zh.yaml +190 -0
  112. package/AISB/catalog/aisb.t3.051_flashtp.yaml +169 -0
  113. package/AISB/catalog/aisb.t3.051_flashtp.zh.yaml +124 -0
  114. package/AISB/catalog/aisb.t3.052_nsdiff.yaml +155 -0
  115. package/AISB/catalog/aisb.t3.052_nsdiff.zh.yaml +138 -0
  116. package/AISB/catalog/aisb.t3.053_k2vae.yaml +158 -0
  117. package/AISB/catalog/aisb.t3.053_k2vae.zh.yaml +132 -0
  118. package/AISB/catalog/aisb.t3.054_timebase.yaml +178 -0
  119. package/AISB/catalog/aisb.t3.054_timebase.zh.yaml +158 -0
  120. package/AISB/catalog/aisb.t3.055_csbrain.yaml +238 -0
  121. package/AISB/catalog/aisb.t3.055_csbrain.zh.yaml +184 -0
  122. package/AISB/catalog/aisb.t3.056_infosam.yaml +224 -0
  123. package/AISB/catalog/aisb.t3.056_infosam.zh.yaml +189 -0
  124. package/AISB/catalog/aisb.t3.057_mdreid.yaml +129 -0
  125. package/AISB/catalog/aisb.t3.057_mdreid.zh.yaml +117 -0
  126. package/AISB/catalog/aisb.t3.058_mindglitch.yaml +171 -0
  127. package/AISB/catalog/aisb.t3.058_mindglitch.zh.yaml +145 -0
  128. package/AISB/catalog/aisb.t3.059_selfsupervised.yaml +154 -0
  129. package/AISB/catalog/aisb.t3.059_selfsupervised.zh.yaml +125 -0
  130. package/AISB/catalog/aisb.t3.060_iaggad.yaml +121 -0
  131. package/AISB/catalog/aisb.t3.060_iaggad.zh.yaml +100 -0
  132. package/AISB/catalog/aisb.t3.061_hsgkn.yaml +136 -0
  133. package/AISB/catalog/aisb.t3.061_hsgkn.zh.yaml +113 -0
  134. package/AISB/catalog/aisb.t3.062_visionts.yaml +237 -0
  135. package/AISB/catalog/aisb.t3.062_visionts.zh.yaml +216 -0
  136. package/AISB/catalog/aisb.t3.063_tsrag.yaml +162 -0
  137. package/AISB/catalog/aisb.t3.063_tsrag.zh.yaml +138 -0
  138. package/AISB/catalog/aisb.t3.064_pir.yaml +221 -0
  139. package/AISB/catalog/aisb.t3.064_pir.zh.yaml +197 -0
  140. package/AISB/catalog/aisb.t3.065_proteinbinding.yaml +234 -0
  141. package/AISB/catalog/aisb.t3.065_proteinbinding.zh.yaml +167 -0
  142. package/AISB/catalog/aisb.t3.066_tropicalattention.yaml +267 -0
  143. package/AISB/catalog/aisb.t3.066_tropicalattention.zh.yaml +229 -0
  144. package/AISB/catalog/aisb.t3.067_kanad.yaml +193 -0
  145. package/AISB/catalog/aisb.t3.067_kanad.zh.yaml +167 -0
  146. package/AISB/catalog/aisb.t3.068_sempo.yaml +187 -0
  147. package/AISB/catalog/aisb.t3.068_sempo.zh.yaml +148 -0
  148. package/AISB/catalog/aisb.t3.069_treehfd.yaml +129 -0
  149. package/AISB/catalog/aisb.t3.069_treehfd.zh.yaml +111 -0
  150. package/AISB/catalog/aisb.t3.070_certifiedunlearning.yaml +224 -0
  151. package/AISB/catalog/aisb.t3.070_certifiedunlearning.zh.yaml +171 -0
  152. package/AISB/catalog/aisb.t3.071_neuralmjd.yaml +142 -0
  153. package/AISB/catalog/aisb.t3.071_neuralmjd.zh.yaml +120 -0
  154. package/AISB/catalog/aisb.t3.072_fedgmt.yaml +181 -0
  155. package/AISB/catalog/aisb.t3.072_fedgmt.zh.yaml +158 -0
  156. package/AISB/catalog/aisb.t3.073_rld.yaml +161 -0
  157. package/AISB/catalog/aisb.t3.073_rld.zh.yaml +129 -0
  158. package/AISB/catalog/aisb.t3.074_lsvi.yaml +163 -0
  159. package/AISB/catalog/aisb.t3.074_lsvi.zh.yaml +129 -0
  160. package/AISB/catalog/aisb.t3.075_treeslicedentropy.yaml +201 -0
  161. package/AISB/catalog/aisb.t3.075_treeslicedentropy.zh.yaml +148 -0
  162. package/AISB/catalog/aisb.t3.076_aanet.yaml +169 -0
  163. package/AISB/catalog/aisb.t3.076_aanet.zh.yaml +129 -0
  164. package/AISB/catalog/aisb.t3.077_cmnn.yaml +199 -0
  165. package/AISB/catalog/aisb.t3.077_cmnn.zh.yaml +165 -0
  166. package/AISB/catalog/aisb.t3.078_conformalanomaly.yaml +146 -0
  167. package/AISB/catalog/aisb.t3.078_conformalanomaly.zh.yaml +117 -0
  168. package/AISB/catalog/aisb.t3.079_dpfkmeans.yaml +131 -0
  169. package/AISB/catalog/aisb.t3.079_dpfkmeans.zh.yaml +104 -0
  170. package/AISB/catalog/aisb.t3.080_latentscorereweight.yaml +169 -0
  171. package/AISB/catalog/aisb.t3.080_latentscorereweight.zh.yaml +123 -0
  172. package/AISB/catalog/aisb.t3.081_qmamba.yaml +150 -0
  173. package/AISB/catalog/aisb.t3.081_qmamba.zh.yaml +117 -0
  174. package/AISB/catalog/aisb.t3.082_onlinellmrouting.yaml +160 -0
  175. package/AISB/catalog/aisb.t3.082_onlinellmrouting.zh.yaml +133 -0
  176. package/AISB/catalog/aisb.t3.083_starformer.yaml +178 -0
  177. package/AISB/catalog/aisb.t3.083_starformer.zh.yaml +140 -0
  178. package/AISB/catalog/aisb.t3.084_ift.yaml +139 -0
  179. package/AISB/catalog/aisb.t3.084_ift.zh.yaml +111 -0
  180. package/AISB/catalog/aisb.t3.085_neuralsurv.yaml +183 -0
  181. package/AISB/catalog/aisb.t3.085_neuralsurv.zh.yaml +143 -0
  182. package/AISB/catalog/aisb.t3.086_stella.yaml +197 -0
  183. package/AISB/catalog/aisb.t3.086_stella.zh.yaml +142 -0
  184. package/AISB/catalog/aisb.t3.087_moses.yaml +167 -0
  185. package/AISB/catalog/aisb.t3.087_moses.zh.yaml +132 -0
  186. package/AISB/catalog/aisb.t3.088_channelnorm.yaml +140 -0
  187. package/AISB/catalog/aisb.t3.088_channelnorm.zh.yaml +109 -0
  188. package/AISB/catalog/aisb.t3.089_causalvelocity.yaml +730 -0
  189. package/AISB/catalog/aisb.t3.089_causalvelocity.zh.yaml +668 -0
  190. package/AISB/catalog/aisb.t3.090_rstib.yaml +144 -0
  191. package/AISB/catalog/aisb.t3.090_rstib.zh.yaml +109 -0
  192. package/AISB/catalog/aisb.t3.091_timeawarecausal.yaml +132 -0
  193. package/AISB/catalog/aisb.t3.091_timeawarecausal.zh.yaml +107 -0
  194. package/AISB/catalog/aisb.t3.092_kmeanslocalopt.yaml +138 -0
  195. package/AISB/catalog/aisb.t3.092_kmeanslocalopt.zh.yaml +110 -0
  196. package/AISB/catalog/aisb.t3.093_fedwmsam.yaml +134 -0
  197. package/AISB/catalog/aisb.t3.093_fedwmsam.zh.yaml +106 -0
  198. package/AISB/catalog/aisb.t3.094_boundre.yaml +147 -0
  199. package/AISB/catalog/aisb.t3.094_boundre.zh.yaml +114 -0
  200. package/AISB/catalog/aisb.t3.095_fastfeaturecp.yaml +153 -0
  201. package/AISB/catalog/aisb.t3.095_fastfeaturecp.zh.yaml +118 -0
  202. package/AISB/catalog/aisb.t3.096_m3svm.yaml +189 -0
  203. package/AISB/catalog/aisb.t3.096_m3svm.zh.yaml +149 -0
  204. package/AISB/catalog/aisb.t3.097_wassersteintl.yaml +212 -0
  205. package/AISB/catalog/aisb.t3.097_wassersteintl.zh.yaml +169 -0
  206. package/AISB/catalog/aisb.t3.098_xmahalanobis.yaml +171 -0
  207. package/AISB/catalog/aisb.t3.098_xmahalanobis.zh.yaml +127 -0
  208. package/AISB/catalog/aisb.t3.099_ollalanding.yaml +248 -0
  209. package/AISB/catalog/aisb.t3.099_ollalanding.zh.yaml +182 -0
  210. package/AISB/catalog/aisb.t3.100_invmissingdata.yaml +179 -0
  211. package/AISB/catalog/aisb.t3.100_invmissingdata.zh.yaml +150 -0
  212. package/AISB/catalog/aisb.t3.101_acia.yaml +164 -0
  213. package/AISB/catalog/aisb.t3.101_acia.zh.yaml +109 -0
  214. package/AISB/catalog/aisb.t3.102_stochasticff.yaml +178 -0
  215. package/AISB/catalog/aisb.t3.102_stochasticff.zh.yaml +130 -0
  216. package/AISB/catalog/aisb.t3.103_qdcp.yaml +150 -0
  217. package/AISB/catalog/aisb.t3.103_qdcp.zh.yaml +116 -0
  218. package/AISB/catalog/aisb.t3.104_balancedactiveinf.yaml +137 -0
  219. package/AISB/catalog/aisb.t3.104_balancedactiveinf.zh.yaml +104 -0
  220. package/AISB/catalog/aisb.t3.105_binaryclasseval.yaml +161 -0
  221. package/AISB/catalog/aisb.t3.105_binaryclasseval.zh.yaml +130 -0
  222. package/AISB/image/001_aisb.t3.001_savvy.jpg +0 -0
  223. package/AISB/image/002_aisb.t3.002_pinet.jpg +0 -0
  224. package/AISB/image/003_aisb.t3.003_dmsqd.jpg +0 -0
  225. package/AISB/image/004_aisb.t3.004_decentralattn.jpg +0 -0
  226. package/AISB/image/005_aisb.t3.005_tsae.jpg +0 -0
  227. package/AISB/image/006_aisb.t3.006_physense.jpg +0 -0
  228. package/AISB/image/007_aisb.t3.007_reasoningiqa.jpg +0 -0
  229. package/AISB/image/008_aisb.t3.008_meanflows.jpg +0 -0
  230. package/AISB/image/009_aisb.t3.009_scoremissing.jpg +0 -0
  231. package/AISB/image/010_aisb.t3.010_suitabilityfilter.jpg +0 -0
  232. package/AISB/image/011_aisb.t3.011_osd.jpg +0 -0
  233. package/AISB/image/012_aisb.t3.012_efficientqat.jpg +0 -0
  234. package/AISB/image/013_aisb.t3.013_appl.jpg +0 -0
  235. package/AISB/image/014_aisb.t3.014_piguard.jpg +0 -0
  236. package/AISB/image/015_aisb.t3.015_frspec.jpg +0 -0
  237. package/AISB/image/016_aisb.t3.016_mathfusion.jpg +0 -0
  238. package/AISB/image/017_aisb.t3.017_multimodalglp.jpg +0 -0
  239. package/AISB/image/018_aisb.t3.018_cotsynth.jpg +0 -0
  240. package/AISB/image/019_aisb.t3.019_dyscaleut.jpg +0 -0
  241. package/AISB/image/020_aisb.t3.020_aristotle.jpg +0 -0
  242. package/AISB/image/021_aisb.t3.021_tokenrecycling.jpg +0 -0
  243. package/AISB/image/022_aisb.t3.022_chainofreasoning.jpg +0 -0
  244. package/AISB/image/023_aisb.t3.023_guidedembed.jpg +0 -0
  245. package/AISB/image/024_aisb.t3.024_outputcentric.jpg +0 -0
  246. package/AISB/image/025_aisb.t3.025_deeper.jpg +0 -0
  247. package/AISB/image/026_aisb.t3.026_gartkg.jpg +0 -0
  248. package/AISB/image/027_aisb.t3.027_citeeval.jpg +0 -0
  249. package/AISB/image/028_aisb.t3.028_sbam.jpg +0 -0
  250. package/AISB/image/029_aisb.t3.029_cdqgeoembed.jpg +0 -0
  251. package/AISB/image/030_aisb.t3.030_processrm.jpg +0 -0
  252. package/AISB/image/031_aisb.t3.031_circuitstability.jpg +0 -0
  253. package/AISB/image/032_aisb.t3.032_ptsolver.jpg +0 -0
  254. package/AISB/image/033_aisb.t3.033_gcse.jpg +0 -0
  255. package/AISB/image/034_aisb.t3.034_ensemblewm.jpg +0 -0
  256. package/AISB/image/035_aisb.t3.035_moralvalueswa.jpg +0 -0
  257. package/AISB/image/036_aisb.t3.036_weakstrongpref.jpg +0 -0
  258. package/AISB/image/037_aisb.t3.037_dementiamask.jpg +0 -0
  259. package/AISB/image/038_aisb.t3.038_tinysam.jpg +0 -0
  260. package/AISB/image/039_aisb.t3.039_calf.jpg +0 -0
  261. package/AISB/image/040_aisb.t3.040_graniteguardian.jpg +0 -0
  262. package/AISB/image/041_aisb.t3.041_amdm.jpg +0 -0
  263. package/AISB/image/042_aisb.t3.042_xpatch.jpg +0 -0
  264. package/AISB/image/043_aisb.t3.043_vhm.jpg +0 -0
  265. package/AISB/image/044_aisb.t3.044_rgvi.jpg +0 -0
  266. package/AISB/image/045_aisb.t3.045_pslstm.jpg +0 -0
  267. package/AISB/image/046_aisb.t3.046_nonstatts.jpg +0 -0
  268. package/AISB/image/047_aisb.t3.047_timepfn.jpg +0 -0
  269. package/AISB/image/048_aisb.t3.048_proxyspex.jpg +0 -0
  270. package/AISB/image/049_aisb.t3.049_hogwildinference.jpg +0 -0
  271. package/AISB/image/050_aisb.t3.050_causalpfn.jpg +0 -0
  272. package/AISB/image/051_aisb.t3.051_flashtp.jpg +0 -0
  273. package/AISB/image/052_aisb.t3.052_nsdiff.jpg +0 -0
  274. package/AISB/image/053_aisb.t3.053_k2vae.jpg +0 -0
  275. package/AISB/image/054_aisb.t3.054_timebase.jpg +0 -0
  276. package/AISB/image/055_aisb.t3.055_csbrain.jpg +0 -0
  277. package/AISB/image/056_aisb.t3.056_infosam.jpg +0 -0
  278. package/AISB/image/057_aisb.t3.057_mdreid.jpg +0 -0
  279. package/AISB/image/058_aisb.t3.058_mindglitch.jpg +0 -0
  280. package/AISB/image/059_aisb.t3.059_selfsupervised.jpg +0 -0
  281. package/AISB/image/060_aisb.t3.060_iaggad.jpg +0 -0
  282. package/AISB/image/061_aisb.t3.061_hsgkn.jpg +0 -0
  283. package/AISB/image/062_aisb.t3.062_visionts.jpg +0 -0
  284. package/AISB/image/063_aisb.t3.063_tsrag.jpg +0 -0
  285. package/AISB/image/064_aisb.t3.064_pir.jpg +0 -0
  286. package/AISB/image/065_aisb.t3.065_proteinbinding.jpg +0 -0
  287. package/AISB/image/066_aisb.t3.066_tropicalattention.jpg +0 -0
  288. package/AISB/image/067_aisb.t3.067_kanad.jpg +0 -0
  289. package/AISB/image/068_aisb.t3.068_sempo.jpg +0 -0
  290. package/AISB/image/069_aisb.t3.069_treehfd.jpg +0 -0
  291. package/AISB/image/070_aisb.t3.070_certifiedunlearning.jpg +0 -0
  292. package/AISB/image/071_aisb.t3.071_neuralmjd.jpg +0 -0
  293. package/AISB/image/072_aisb.t3.072_fedgmt.jpg +0 -0
  294. package/AISB/image/073_aisb.t3.073_rld.jpg +0 -0
  295. package/AISB/image/074_aisb.t3.074_lsvi.jpg +0 -0
  296. package/AISB/image/075_aisb.t3.075_treeslicedentropy.jpg +0 -0
  297. package/AISB/image/076_aisb.t3.076_aanet.jpg +0 -0
  298. package/AISB/image/077_aisb.t3.077_cmnn.jpg +0 -0
  299. package/AISB/image/078_aisb.t3.078_conformalanomaly.jpg +0 -0
  300. package/AISB/image/079_aisb.t3.079_dpfkmeans.jpg +0 -0
  301. package/AISB/image/080_aisb.t3.080_latentscorereweight.jpg +0 -0
  302. package/AISB/image/081_aisb.t3.081_qmamba.jpg +0 -0
  303. package/AISB/image/082_aisb.t3.082_onlinellmrouting.jpg +0 -0
  304. package/AISB/image/083_aisb.t3.083_starformer.jpg +0 -0
  305. package/AISB/image/084_aisb.t3.084_ift.jpg +0 -0
  306. package/AISB/image/085_aisb.t3.085_neuralsurv.jpg +0 -0
  307. package/AISB/image/086_aisb.t3.086_stella.jpg +0 -0
  308. package/AISB/image/087_aisb.t3.087_moses.jpg +0 -0
  309. package/AISB/image/088_aisb.t3.088_channelnorm.jpg +0 -0
  310. package/AISB/image/089_aisb.t3.089_causalvelocity.jpg +0 -0
  311. package/AISB/image/090_aisb.t3.090_rstib.jpg +0 -0
  312. package/AISB/image/091_aisb.t3.091_timeawarecausal.jpg +0 -0
  313. package/AISB/image/092_aisb.t3.092_kmeanslocalopt.jpg +0 -0
  314. package/AISB/image/093_aisb.t3.093_fedwmsam.jpg +0 -0
  315. package/AISB/image/094_aisb.t3.094_boundre.jpg +0 -0
  316. package/AISB/image/095_aisb.t3.095_fastfeaturecp.jpg +0 -0
  317. package/AISB/image/096_aisb.t3.096_m3svm.jpg +0 -0
  318. package/AISB/image/097_aisb.t3.097_wassersteintl.jpg +0 -0
  319. package/AISB/image/098_aisb.t3.098_xmahalanobis.jpg +0 -0
  320. package/AISB/image/099_aisb.t3.099_ollalanding.jpg +0 -0
  321. package/AISB/image/100_aisb.t3.100_invmissingdata.jpg +0 -0
  322. package/AISB/image/101_aisb.t3.101_acia.jpg +0 -0
  323. package/AISB/image/102_aisb.t3.102_stochasticff.jpg +0 -0
  324. package/AISB/image/103_aisb.t3.103_qdcp.jpg +0 -0
  325. package/AISB/image/104_aisb.t3.104_balancedactiveinf.jpg +0 -0
  326. package/AISB/image/105_aisb.t3.105_binaryclasseval.jpg +0 -0
  327. package/AISB/image/106_aisb.t1.reasoning_lite.jpg +0 -0
  328. package/AISB/image/107_aisb.t2.paper_audit.jpg +0 -0
  329. package/AISB/image/108_aisb.t3.multi_gpu_search.jpg +0 -0
  330. package/AISB/image/109_aisb.t3.tdc_admet.jpg +0 -0
  331. package/AISB/image/aisb.b1.agentic_coding.svg +16 -0
  332. package/AISB/image/aisb.b10.climate_earth.svg +16 -0
  333. package/AISB/image/aisb.b11.model_efficiency.svg +16 -0
  334. package/AISB/image/aisb.b12.embodied_ai.svg +16 -0
  335. package/AISB/image/aisb.b2.agent_systems.svg +16 -0
  336. package/AISB/image/aisb.b3.self_evolving_rl.svg +16 -0
  337. package/AISB/image/aisb.b4.lm_reasoning.svg +16 -0
  338. package/AISB/image/aisb.b5.math_proof.svg +16 -0
  339. package/AISB/image/aisb.b6.research_process.svg +16 -0
  340. package/AISB/image/aisb.b7.multimodal_fusion.svg +16 -0
  341. package/AISB/image/aisb.b8.lifesci_drug.svg +16 -0
  342. package/AISB/image/aisb.b9.material_science.svg +16 -0
  343. package/README.md +196 -32
  344. package/bin/ds.js +924 -66
  345. package/docs/en/00_QUICK_START.md +195 -18
  346. package/docs/en/01_SETTINGS_REFERENCE.md +468 -96
  347. package/docs/en/02_START_RESEARCH_GUIDE.md +26 -5
  348. package/docs/en/03_QQ_CONNECTOR_GUIDE.md +14 -3
  349. package/docs/en/04_LINGZHU_CONNECTOR_GUIDE.md +2 -0
  350. package/docs/en/05_TUI_GUIDE.md +171 -2
  351. package/docs/en/07_MEMORY_AND_MCP.md +38 -2
  352. package/docs/en/09_DOCTOR.md +78 -7
  353. package/docs/en/10_WEIXIN_CONNECTOR_GUIDE.md +38 -1
  354. package/docs/en/11_LICENSE_AND_RISK.md +4 -0
  355. package/docs/en/12_GUIDED_WORKFLOW_TOUR.md +15 -0
  356. package/docs/en/14_PROMPT_SKILLS_AND_MCP_GUIDE.md +9 -0
  357. package/docs/en/15_CODEX_PROVIDER_SETUP.md +624 -180
  358. package/docs/en/16_TELEGRAM_CONNECTOR_GUIDE.md +14 -0
  359. package/docs/en/17_WHATSAPP_CONNECTOR_GUIDE.md +14 -0
  360. package/docs/en/18_FEISHU_CONNECTOR_GUIDE.md +14 -0
  361. package/docs/en/21_LOCAL_MODEL_BACKENDS_GUIDE.md +386 -0
  362. package/docs/en/22_BENCHSTORE_YAML_REFERENCE.md +469 -0
  363. package/docs/en/23_BENCHSTORE_GITHUB_RELEASES_SPEC.md +316 -0
  364. package/docs/en/24_CLAUDE_CODE_PROVIDER_SETUP.md +469 -0
  365. package/docs/en/25_OPENCODE_PROVIDER_SETUP.md +653 -0
  366. package/docs/en/26_CITATION_AND_ATTRIBUTION.md +119 -0
  367. package/docs/en/27_KIMI_CODE_PROVIDER_SETUP.md +180 -0
  368. package/docs/en/28_DISCORD_CONNECTOR_GUIDE.md +61 -0
  369. package/docs/en/29_SLACK_CONNECTOR_GUIDE.md +60 -0
  370. package/docs/en/30_SETTINGS_CONTROL_CENTER_GUIDE.md +371 -0
  371. package/docs/en/{19_LOCAL_BROWSER_AUTH.md → 31_LOCAL_BROWSER_AUTH.md} +1 -1
  372. package/docs/en/32_WINDOWS_WSL2_DEPLOYMENT_GUIDE.md +273 -0
  373. package/docs/en/33_WORKSPACE_EXPLORER_QA.md +121 -0
  374. package/docs/en/91_DEVELOPMENT.md +266 -0
  375. package/docs/en/99_ACKNOWLEDGEMENTS.md +24 -19
  376. package/docs/en/README.md +48 -7
  377. package/docs/images/admin/admin-connectors-health-en.png +0 -0
  378. package/docs/images/admin/admin-controllers-en.png +0 -0
  379. package/docs/images/admin/admin-diagnostics-en.png +0 -0
  380. package/docs/images/admin/admin-errors-en.png +0 -0
  381. package/docs/images/admin/admin-issues-en.png +0 -0
  382. package/docs/images/admin/admin-logs-en.png +0 -0
  383. package/docs/images/admin/admin-quest-detail-en.png +0 -0
  384. package/docs/images/admin/admin-quests-en.png +0 -0
  385. package/docs/images/admin/admin-repairs-en.png +0 -0
  386. package/docs/images/admin/admin-runtime-en.png +0 -0
  387. package/docs/images/admin/admin-search-en.png +0 -0
  388. package/docs/images/admin/admin-stats-en.png +0 -0
  389. package/docs/images/admin/admin-summary-en.png +0 -0
  390. package/docs/images/connectors/connector-discord-en.png +0 -0
  391. package/docs/images/connectors/connector-feishu-en.png +0 -0
  392. package/docs/images/connectors/connector-lingzhu-en.png +0 -0
  393. package/docs/images/connectors/connector-qq-en.png +0 -0
  394. package/docs/images/connectors/connector-slack-en.png +0 -0
  395. package/docs/images/connectors/connector-telegram-en.png +0 -0
  396. package/docs/images/connectors/connector-weixin-en.png +0 -0
  397. package/docs/images/connectors/connector-whatsapp-en.png +0 -0
  398. package/docs/images/settings/settings-baselines-en.png +0 -0
  399. package/docs/images/settings/settings-config-en.png +0 -0
  400. package/docs/images/settings/settings-connectors-overview-en.png +0 -0
  401. package/docs/images/settings/settings-deepxiv-en.png +0 -0
  402. package/docs/images/settings/settings-mcp-servers-en.png +0 -0
  403. package/docs/images/settings/settings-plugins-en.png +0 -0
  404. package/docs/images/settings/settings-runners-en.png +0 -0
  405. package/docs/zh/00_QUICK_START.md +142 -18
  406. package/docs/zh/01_SETTINGS_REFERENCE.md +219 -98
  407. package/docs/zh/02_START_RESEARCH_GUIDE.md +26 -5
  408. package/docs/zh/05_TUI_GUIDE.md +171 -2
  409. package/docs/zh/07_MEMORY_AND_MCP.md +29 -2
  410. package/docs/zh/09_DOCTOR.md +54 -8
  411. package/docs/zh/10_WEIXIN_CONNECTOR_GUIDE.md +24 -1
  412. package/docs/zh/11_LICENSE_AND_RISK.md +4 -0
  413. package/docs/zh/12_GUIDED_WORKFLOW_TOUR.md +15 -0
  414. package/docs/zh/14_PROMPT_SKILLS_AND_MCP_GUIDE.md +9 -0
  415. package/docs/zh/15_CODEX_PROVIDER_SETUP.md +552 -181
  416. package/docs/zh/21_LOCAL_MODEL_BACKENDS_GUIDE.md +384 -0
  417. package/docs/zh/22_BENCHSTORE_YAML_REFERENCE.md +459 -0
  418. package/docs/zh/23_BENCHSTORE_GITHUB_RELEASES_SPEC.md +287 -0
  419. package/docs/zh/23_CLAUDE_RUNNER_GUIDE.md +103 -0
  420. package/docs/zh/24_CLAUDE_CODE_PROVIDER_SETUP.md +460 -0
  421. package/docs/zh/25_OPENCODE_PROVIDER_SETUP.md +660 -0
  422. package/docs/zh/26_CITATION_AND_ATTRIBUTION.md +102 -0
  423. package/docs/zh/27_KIMI_CODE_PROVIDER_SETUP.md +51 -0
  424. package/docs/zh/{19_LOCAL_BROWSER_AUTH.md → 31_LOCAL_BROWSER_AUTH.md} +1 -1
  425. package/docs/zh/32_WINDOWS_WSL2_DEPLOYMENT_GUIDE.md +264 -0
  426. package/docs/zh/33_WORKSPACE_EXPLORER_QA.md +127 -0
  427. package/docs/zh/99_ACKNOWLEDGEMENTS.md +23 -19
  428. package/docs/zh/README.md +33 -7
  429. package/install.sh +168 -20
  430. package/package.json +5 -1
  431. package/pyproject.toml +2 -1
  432. package/src/deepscientist/__init__.py +1 -1
  433. package/src/deepscientist/acp/envelope.py +13 -0
  434. package/src/deepscientist/admin/__init__.py +3 -0
  435. package/src/deepscientist/admin/charts.py +681 -0
  436. package/src/deepscientist/admin/logs.py +119 -0
  437. package/src/deepscientist/admin/repairs.py +217 -0
  438. package/src/deepscientist/admin/service.py +1310 -0
  439. package/src/deepscientist/admin/system_info.py +700 -0
  440. package/src/deepscientist/admin/tasks.py +465 -0
  441. package/src/deepscientist/admin/tool_metrics.py +600 -0
  442. package/src/deepscientist/artifact/guidance.py +8 -4
  443. package/src/deepscientist/artifact/schemas.py +115 -0
  444. package/src/deepscientist/artifact/service.py +4268 -260
  445. package/src/deepscientist/bash_exec/monitor.py +30 -3
  446. package/src/deepscientist/bash_exec/service.py +134 -1
  447. package/src/deepscientist/benchstore/__init__.py +4 -0
  448. package/src/deepscientist/benchstore/prompt_builder.py +224 -0
  449. package/src/deepscientist/benchstore/service.py +1716 -0
  450. package/src/deepscientist/bridges/connectors.py +8 -2
  451. package/src/deepscientist/channels/weixin_ilink.py +8 -1
  452. package/src/deepscientist/cli.py +92 -17
  453. package/src/deepscientist/codex_cli_compat.py +187 -74
  454. package/src/deepscientist/config/models.py +82 -11
  455. package/src/deepscientist/config/service.py +1077 -93
  456. package/src/deepscientist/connector/weixin_support.py +48 -17
  457. package/src/deepscientist/daemon/api/handlers.py +827 -235
  458. package/src/deepscientist/daemon/api/router.py +81 -1
  459. package/src/deepscientist/daemon/app.py +1512 -85
  460. package/src/deepscientist/diagnostics/__init__.py +6 -0
  461. package/src/deepscientist/diagnostics/runner_failures.py +277 -0
  462. package/src/deepscientist/doctor.py +407 -56
  463. package/src/deepscientist/evidence_packets.py +590 -0
  464. package/src/deepscientist/home.py +52 -4
  465. package/src/deepscientist/kimi_cli_compat.py +50 -0
  466. package/src/deepscientist/latex_runtime.py +2 -2
  467. package/src/deepscientist/mcp/context.py +2 -0
  468. package/src/deepscientist/mcp/schemas.py +114 -0
  469. package/src/deepscientist/mcp/server.py +1566 -126
  470. package/src/deepscientist/memory/service.py +203 -16
  471. package/src/deepscientist/process_control.py +8 -1
  472. package/src/deepscientist/prompts/builder.py +850 -88
  473. package/src/deepscientist/quest/__init__.py +2 -2
  474. package/src/deepscientist/quest/layout.py +12 -1
  475. package/src/deepscientist/quest/node_traces.py +10 -0
  476. package/src/deepscientist/quest/service.py +1852 -161
  477. package/src/deepscientist/quest/stage_views.py +1 -1
  478. package/src/deepscientist/runners/__init__.py +18 -0
  479. package/src/deepscientist/runners/base.py +89 -1
  480. package/src/deepscientist/runners/builtins.py +13 -1
  481. package/src/deepscientist/runners/claude.py +391 -0
  482. package/src/deepscientist/runners/codex.py +480 -35
  483. package/src/deepscientist/runners/codex_telemetry.py +127 -0
  484. package/src/deepscientist/runners/kimi.py +334 -0
  485. package/src/deepscientist/runners/metadata.py +68 -0
  486. package/src/deepscientist/runners/opencode.py +414 -0
  487. package/src/deepscientist/runners/runtime_overrides.py +100 -0
  488. package/src/deepscientist/runners/simple_cli.py +538 -0
  489. package/src/deepscientist/runtime_storage.py +303 -0
  490. package/src/deepscientist/shared.py +80 -16
  491. package/src/deepscientist/skills/installer.py +37 -0
  492. package/src/deepscientist/skills/registry.py +2 -0
  493. package/src/deepscientist/tinytex.py +2 -2
  494. package/src/deepscientist/tui.py +10 -3
  495. package/src/prompts/benchstore/system.md +77 -0
  496. package/src/prompts/connectors/qq.md +33 -2
  497. package/src/prompts/connectors/weixin.md +208 -23
  498. package/src/prompts/contracts/admin_ops.md +74 -0
  499. package/src/prompts/contracts/admin_ops_knowledge.md +138 -0
  500. package/src/prompts/contracts/shared_interaction.md +5 -10
  501. package/src/prompts/start_setup/system.md +422 -0
  502. package/src/prompts/system.md +411 -304
  503. package/src/prompts/system_copilot.md +89 -0
  504. package/src/skills/analysis-campaign/SKILL.md +239 -578
  505. package/src/skills/analysis-campaign/references/artifact-flow-examples.md +102 -0
  506. package/src/skills/analysis-campaign/references/boundary-cases.md +98 -0
  507. package/src/skills/analysis-campaign/references/campaign-checklist-template.md +39 -24
  508. package/src/skills/analysis-campaign/references/campaign-design.md +26 -10
  509. package/src/skills/analysis-campaign/references/campaign-plan-template.md +53 -54
  510. package/src/skills/analysis-campaign/references/operational-guidance.md +97 -0
  511. package/src/skills/analysis-campaign/references/writing-facing-slice-examples.md +10 -20
  512. package/src/skills/baseline/SKILL.md +183 -461
  513. package/src/skills/baseline/references/artifact-flow-examples.md +106 -0
  514. package/src/skills/baseline/references/artifact-payload-examples.md +1 -1
  515. package/src/skills/baseline/references/baseline-checklist-template.md +27 -35
  516. package/src/skills/baseline/references/baseline-plan-template.md +37 -76
  517. package/src/skills/baseline/references/boundary-cases.md +86 -0
  518. package/src/skills/baseline/references/codebase-audit-checklist.md +2 -6
  519. package/src/skills/baseline/references/comparability-contract.md +7 -12
  520. package/src/skills/baseline/references/operational-guidance.md +56 -0
  521. package/src/skills/baseline/references/route-selection.md +5 -25
  522. package/src/skills/decision/SKILL.md +113 -306
  523. package/src/skills/decision/references/checkpoint-memory-template.md +47 -0
  524. package/src/skills/decision/references/operational-guidance.md +94 -0
  525. package/src/skills/decision/references/research-route-criteria.md +7 -8
  526. package/src/skills/decision/references/strategic-decision-template.md +13 -26
  527. package/src/skills/experiment/SKILL.md +132 -670
  528. package/src/skills/experiment/references/execution-playbook.md +374 -0
  529. package/src/skills/experiment/references/main-experiment-checklist-template.md +26 -2
  530. package/src/skills/experiment/references/main-experiment-plan-template.md +28 -17
  531. package/src/skills/experiment/references/operational-guidance.md +108 -0
  532. package/src/skills/finalize/SKILL.md +62 -0
  533. package/src/skills/finalize/references/checkpoint-memory-template.md +49 -0
  534. package/src/skills/finalize/references/resume-packet-template.md +7 -0
  535. package/src/skills/idea/SKILL.md +228 -15
  536. package/src/skills/idea/references/controlled-brainstorming-playbook.md +78 -0
  537. package/src/skills/idea/references/current-board-packet-template.md +61 -0
  538. package/src/skills/idea/references/high-value-idea-sourcing.md +119 -0
  539. package/src/skills/idea/references/idea-generation-playbook.md +21 -0
  540. package/src/skills/idea/references/idea-thinking-flow.md +6 -0
  541. package/src/skills/idea/references/literature-survey-template.md +3 -0
  542. package/src/skills/idea/references/objective-contract-template.md +54 -0
  543. package/src/skills/idea/references/outline-seeding-example.md +56 -0
  544. package/src/skills/idea/references/pre-idea-draft-template.md +105 -0
  545. package/src/skills/idea/references/related-work-playbook.md +75 -2
  546. package/src/skills/idea/references/research-history-playbook.md +114 -0
  547. package/src/skills/idea/references/selection-gate.md +58 -6
  548. package/src/skills/intake-audit/SKILL.md +43 -2
  549. package/src/skills/intake-audit/references/state-audit-template.md +10 -0
  550. package/src/skills/nature-data/SKILL.md +128 -0
  551. package/src/skills/nature-data/UPSTREAM_LICENSE.txt +21 -0
  552. package/src/skills/nature-data/agents/openai.yaml +4 -0
  553. package/src/skills/nature-data/references/chinese-author-alignment.md +84 -0
  554. package/src/skills/nature-data/references/fair-metadata-checklist.md +105 -0
  555. package/src/skills/nature-data/references/policy-principles.md +103 -0
  556. package/src/skills/nature-data/references/repository-and-identifiers.md +96 -0
  557. package/src/skills/nature-data/references/source-basis.md +54 -0
  558. package/src/skills/nature-data/references/statement-patterns.md +153 -0
  559. package/src/skills/nature-figure/SKILL.md +197 -0
  560. package/src/skills/nature-figure/UPSTREAM_LICENSE.txt +21 -0
  561. package/src/skills/nature-figure/agents/openai.yaml +4 -0
  562. package/src/skills/nature-figure/evals/evals.json +37 -0
  563. package/src/skills/nature-figure/references/api.md +428 -0
  564. package/src/skills/nature-figure/references/backend-selection.md +100 -0
  565. package/src/skills/nature-figure/references/chart-types.md +281 -0
  566. package/src/skills/nature-figure/references/common-patterns.md +349 -0
  567. package/src/skills/nature-figure/references/design-theory.md +436 -0
  568. package/src/skills/nature-figure/references/figure-contract.md +93 -0
  569. package/src/skills/nature-figure/references/nature-2026-observations.md +112 -0
  570. package/src/skills/nature-figure/references/qa-contract.md +119 -0
  571. package/src/skills/nature-figure/references/r-template-index.md +66 -0
  572. package/src/skills/nature-figure/references/r-workflow.md +161 -0
  573. package/src/skills/nature-figure/references/tutorials.md +250 -0
  574. package/src/skills/nature-paper2ppt/SKILL.md +507 -0
  575. package/src/skills/nature-paper2ppt/UPSTREAM_LICENSE.txt +21 -0
  576. package/src/skills/nature-paper2ppt/agents/openai.yaml +4 -0
  577. package/src/skills/nature-polishing/SKILL.md +385 -0
  578. package/src/skills/nature-polishing/UPSTREAM_LICENSE.txt +21 -0
  579. package/src/skills/nature-polishing/agents/openai.yaml +4 -0
  580. package/src/skills/nature-polishing/references/phrasebank-playbook.md +162 -0
  581. package/src/skills/nature-polishing/references/section-moves.md +240 -0
  582. package/src/skills/nature-polishing/references/style-guardrails.md +94 -0
  583. package/src/skills/nature-polishing/references/writing-strategy.md +148 -0
  584. package/src/skills/optimize/SKILL.md +177 -1568
  585. package/src/skills/optimize/references/brief-shaping-playbook.md +95 -0
  586. package/src/skills/optimize/references/candidate-board-template.md +13 -0
  587. package/src/skills/optimize/references/candidate-ranking-template.md +51 -0
  588. package/src/skills/optimize/references/codegen-route-playbook.md +50 -0
  589. package/src/skills/optimize/references/debug-response-template.md +29 -0
  590. package/src/skills/optimize/references/frontier-review-template.md +32 -0
  591. package/src/skills/optimize/references/fusion-playbook.md +36 -0
  592. package/src/skills/optimize/references/method-brief-template.md +73 -0
  593. package/src/skills/optimize/references/operational-guidance.md +621 -0
  594. package/src/skills/optimize/references/optimization-memory-template.md +30 -0
  595. package/src/skills/optimize/references/optimize-checklist-template.md +18 -0
  596. package/src/skills/optimize/references/plateau-response-playbook.md +28 -0
  597. package/src/skills/optimize/references/prompt-patterns.md +49 -0
  598. package/src/skills/paper-outline/SKILL.md +227 -0
  599. package/src/skills/paper-outline/references/outline-patterns.md +87 -0
  600. package/src/skills/paper-plot/SKILL.md +79 -0
  601. package/src/skills/paper-plot/agents/openai.yaml +4 -0
  602. package/src/skills/paper-plot/references/bar_grouped_hatch.md +96 -0
  603. package/src/skills/paper-plot/references/bar_paired_delta.md +72 -0
  604. package/src/skills/paper-plot/references/line_confidence_band.md +75 -0
  605. package/src/skills/paper-plot/references/line_loss_with_inset.md +65 -0
  606. package/src/skills/paper-plot/references/line_training_curve.md +44 -0
  607. package/src/skills/paper-plot/references/radar_dual_series.md +59 -0
  608. package/src/skills/paper-plot/references/scatter_broken_axis.md +59 -0
  609. package/src/skills/paper-plot/references/scatter_tsne_cluster.md +72 -0
  610. package/src/skills/paper-plot/scripts/bar_memevolve.py +109 -0
  611. package/src/skills/paper-plot/scripts/bar_spice.py +166 -0
  612. package/src/skills/paper-plot/scripts/line_aime.py +94 -0
  613. package/src/skills/paper-plot/scripts/line_loss_inset.py +157 -0
  614. package/src/skills/paper-plot/scripts/line_selfdistill.py +168 -0
  615. package/src/skills/paper-plot/scripts/radar_dora.py +151 -0
  616. package/src/skills/paper-plot/scripts/scatter_break.py +169 -0
  617. package/src/skills/paper-plot/scripts/scatter_tsne.py +133 -0
  618. package/src/skills/rebuttal/SKILL.md +9 -0
  619. package/src/skills/references/tool-usage-by-stage.md +438 -0
  620. package/src/skills/review/SKILL.md +105 -7
  621. package/src/skills/science/PROVENANCE.md +44 -0
  622. package/src/skills/science/SKILL.md +137 -0
  623. package/src/skills/science/references/artifact-science-tool.md +110 -0
  624. package/src/skills/science/references/claim-type-discipline.md +56 -0
  625. package/src/skills/science/references/domain-index.md +422 -0
  626. package/src/skills/science/references/hpc-via-bash-exec.md +42 -0
  627. package/src/skills/science/references/package-check-playbook.md +64 -0
  628. package/src/skills/science/references/package-index.min.json +3616 -0
  629. package/src/skills/science/references/packages/abinit.md +80 -0
  630. package/src/skills/science/references/packages/acts.md +73 -0
  631. package/src/skills/science/references/packages/aiida-core.md +80 -0
  632. package/src/skills/science/references/packages/alamode.md +80 -0
  633. package/src/skills/science/references/packages/amuse.md +88 -0
  634. package/src/skills/science/references/packages/anndata.md +88 -0
  635. package/src/skills/science/references/packages/arbor.md +80 -0
  636. package/src/skills/science/references/packages/arc.md +73 -0
  637. package/src/skills/science/references/packages/astropy.md +88 -0
  638. package/src/skills/science/references/packages/astroquery.md +88 -0
  639. package/src/skills/science/references/packages/atomate2.md +80 -0
  640. package/src/skills/science/references/packages/atomsmltr.md +73 -0
  641. package/src/skills/science/references/packages/awkward.md +73 -0
  642. package/src/skills/science/references/packages/batman.md +88 -0
  643. package/src/skills/science/references/packages/biopython.md +88 -0
  644. package/src/skills/science/references/packages/bloqade.md +73 -0
  645. package/src/skills/science/references/packages/brian2.md +73 -0
  646. package/src/skills/science/references/packages/bullet3.md +73 -0
  647. package/src/skills/science/references/packages/calculix.md +80 -0
  648. package/src/skills/science/references/packages/cantera.md +73 -0
  649. package/src/skills/science/references/packages/cavity-md-ipi.md +80 -0
  650. package/src/skills/science/references/packages/ccdproc.md +88 -0
  651. package/src/skills/science/references/packages/celerite2.md +88 -0
  652. package/src/skills/science/references/packages/cellrank.md +73 -0
  653. package/src/skills/science/references/packages/cesm.md +80 -0
  654. package/src/skills/science/references/packages/chemicals.md +73 -0
  655. package/src/skills/science/references/packages/chempy.md +73 -0
  656. package/src/skills/science/references/packages/cirq.md +73 -0
  657. package/src/skills/science/references/packages/coffea.md +73 -0
  658. package/src/skills/science/references/packages/cp2k.md +88 -0
  659. package/src/skills/science/references/packages/custodian.md +80 -0
  660. package/src/skills/science/references/packages/dart.md +73 -0
  661. package/src/skills/science/references/packages/datamol.md +88 -0
  662. package/src/skills/science/references/packages/dd4hep.md +73 -0
  663. package/src/skills/science/references/packages/dealii.md +80 -0
  664. package/src/skills/science/references/packages/deepchem.md +88 -0
  665. package/src/skills/science/references/packages/delphes.md +73 -0
  666. package/src/skills/science/references/packages/devito.md +80 -0
  667. package/src/skills/science/references/packages/dftb.md +88 -0
  668. package/src/skills/science/references/packages/dftd4.md +88 -0
  669. package/src/skills/science/references/packages/dftk-jl.md +80 -0
  670. package/src/skills/science/references/packages/dolfinx.md +80 -0
  671. package/src/skills/science/references/packages/drake.md +73 -0
  672. package/src/skills/science/references/packages/dumux.md +73 -0
  673. package/src/skills/science/references/packages/elk.md +80 -0
  674. package/src/skills/science/references/packages/elmerfem.md +80 -0
  675. package/src/skills/science/references/packages/enzo-e.md +88 -0
  676. package/src/skills/science/references/packages/espresso.md +80 -0
  677. package/src/skills/science/references/packages/exoplanet.md +88 -0
  678. package/src/skills/science/references/packages/fairroot.md +73 -0
  679. package/src/skills/science/references/packages/fbpic.md +80 -0
  680. package/src/skills/science/references/packages/fdtdbath-meep.md +80 -0
  681. package/src/skills/science/references/packages/geant4.md +73 -0
  682. package/src/skills/science/references/packages/geosx.md +80 -0
  683. package/src/skills/science/references/packages/gprmax.md +80 -0
  684. package/src/skills/science/references/packages/gromacs.md +80 -0
  685. package/src/skills/science/references/packages/gwaslab.md +73 -0
  686. package/src/skills/science/references/packages/gz-sim.md +73 -0
  687. package/src/skills/science/references/packages/hail.md +88 -0
  688. package/src/skills/science/references/packages/hiphive.md +80 -0
  689. package/src/skills/science/references/packages/hoomd-blue.md +80 -0
  690. package/src/skills/science/references/packages/itensor.md +73 -0
  691. package/src/skills/science/references/packages/itensors-jl.md +73 -0
  692. package/src/skills/science/references/packages/jdftx.md +73 -0
  693. package/src/skills/science/references/packages/jobflow.md +80 -0
  694. package/src/skills/science/references/packages/kadanoffbaym-jl.md +73 -0
  695. package/src/skills/science/references/packages/kite.md +80 -0
  696. package/src/skills/science/references/packages/kratos.md +80 -0
  697. package/src/skills/science/references/packages/kwant.md +73 -0
  698. package/src/skills/science/references/packages/lammps.md +80 -0
  699. package/src/skills/science/references/packages/lightkurve.md +88 -0
  700. package/src/skills/science/references/packages/limix.md +73 -0
  701. package/src/skills/science/references/packages/maxwelllink.md +80 -0
  702. package/src/skills/science/references/packages/mcdc.md +73 -0
  703. package/src/skills/science/references/packages/meep.md +80 -0
  704. package/src/skills/science/references/packages/mfem.md +80 -0
  705. package/src/skills/science/references/packages/mitgcm.md +73 -0
  706. package/src/skills/science/references/packages/modflow6.md +73 -0
  707. package/src/skills/science/references/packages/molecool.md +73 -0
  708. package/src/skills/science/references/packages/mom6.md +73 -0
  709. package/src/skills/science/references/packages/moose.md +80 -0
  710. package/src/skills/science/references/packages/mpas-model.md +73 -0
  711. package/src/skills/science/references/packages/mujoco.md +73 -0
  712. package/src/skills/science/references/packages/mumax3.md +73 -0
  713. package/src/skills/science/references/packages/nekrs.md +80 -0
  714. package/src/skills/science/references/packages/nessi.md +73 -0
  715. package/src/skills/science/references/packages/nest-simulator.md +73 -0
  716. package/src/skills/science/references/packages/netket.md +73 -0
  717. package/src/skills/science/references/packages/neuron.md +73 -0
  718. package/src/skills/science/references/packages/nextflow.md +88 -0
  719. package/src/skills/science/references/packages/nwchem.md +88 -0
  720. package/src/skills/science/references/packages/openbabel.md +88 -0
  721. package/src/skills/science/references/packages/openems.md +80 -0
  722. package/src/skills/science/references/packages/openff-toolkit.md +88 -0
  723. package/src/skills/science/references/packages/openfoam-dev.md +80 -0
  724. package/src/skills/science/references/packages/openmc.md +73 -0
  725. package/src/skills/science/references/packages/openmm.md +80 -0
  726. package/src/skills/science/references/packages/openmoc.md +73 -0
  727. package/src/skills/science/references/packages/openmx.md +80 -0
  728. package/src/skills/science/references/packages/opensees.md +80 -0
  729. package/src/skills/science/references/packages/opensn.md +80 -0
  730. package/src/skills/science/references/packages/opm-simulators.md +73 -0
  731. package/src/skills/science/references/packages/oqupy.md +73 -0
  732. package/src/skills/science/references/packages/packmol.md +80 -0
  733. package/src/skills/science/references/packages/palabos.md +80 -0
  734. package/src/skills/science/references/packages/parflow.md +80 -0
  735. package/src/skills/science/references/packages/pennylane.md +88 -0
  736. package/src/skills/science/references/packages/perceval.md +73 -0
  737. package/src/skills/science/references/packages/phono3py.md +73 -0
  738. package/src/skills/science/references/packages/phonopy.md +73 -0
  739. package/src/skills/science/references/packages/photutils.md +88 -0
  740. package/src/skills/science/references/packages/picongpu.md +80 -0
  741. package/src/skills/science/references/packages/plink-ng.md +88 -0
  742. package/src/skills/science/references/packages/precice.md +73 -0
  743. package/src/skills/science/references/packages/psc.md +80 -0
  744. package/src/skills/science/references/packages/psi4.md +88 -0
  745. package/src/skills/science/references/packages/pybinding.md +73 -0
  746. package/src/skills/science/references/packages/pyfr.md +80 -0
  747. package/src/skills/science/references/packages/pyhf.md +73 -0
  748. package/src/skills/science/references/packages/pyiron_base.md +80 -0
  749. package/src/skills/science/references/packages/pylcp.md +73 -0
  750. package/src/skills/science/references/packages/pylith.md +80 -0
  751. package/src/skills/science/references/packages/pynbody.md +88 -0
  752. package/src/skills/science/references/packages/pysam.md +88 -0
  753. package/src/skills/science/references/packages/pyscf.md +88 -0
  754. package/src/skills/science/references/packages/q-e.md +73 -0
  755. package/src/skills/science/references/packages/qibo.md +73 -0
  756. package/src/skills/science/references/packages/qiskit.md +73 -0
  757. package/src/skills/science/references/packages/quantica-jl.md +73 -0
  758. package/src/skills/science/references/packages/quantumoptics-jl.md +73 -0
  759. package/src/skills/science/references/packages/quimb.md +73 -0
  760. package/src/skills/science/references/packages/qulacs.md +73 -0
  761. package/src/skills/science/references/packages/qutip.md +73 -0
  762. package/src/skills/science/references/packages/rdkit.md +88 -0
  763. package/src/skills/science/references/packages/rmg-py.md +73 -0
  764. package/src/skills/science/references/packages/root.md +73 -0
  765. package/src/skills/science/references/packages/scanpy.md +88 -0
  766. package/src/skills/science/references/packages/scikit-allel.md +88 -0
  767. package/src/skills/science/references/packages/scikit-bio.md +88 -0
  768. package/src/skills/science/references/packages/scqubits.md +73 -0
  769. package/src/skills/science/references/packages/scuff-em.md +80 -0
  770. package/src/skills/science/references/packages/scvi-tools.md +73 -0
  771. package/src/skills/science/references/packages/seissol.md +73 -0
  772. package/src/skills/science/references/packages/sfepy.md +80 -0
  773. package/src/skills/science/references/packages/sisl.md +73 -0
  774. package/src/skills/science/references/packages/smilei.md +80 -0
  775. package/src/skills/science/references/packages/snakemake.md +88 -0
  776. package/src/skills/science/references/packages/specfem3d-globe.md +80 -0
  777. package/src/skills/science/references/packages/specutils.md +88 -0
  778. package/src/skills/science/references/packages/spglib.md +80 -0
  779. package/src/skills/science/references/packages/squidpy.md +88 -0
  780. package/src/skills/science/references/packages/starry.md +88 -0
  781. package/src/skills/science/references/packages/strawberryfields.md +73 -0
  782. package/src/skills/science/references/packages/su2.md +80 -0
  783. package/src/skills/science/references/packages/sunny-jl.md +73 -0
  784. package/src/skills/science/references/packages/sw4.md +73 -0
  785. package/src/skills/science/references/packages/swift.md +88 -0
  786. package/src/skills/science/references/packages/tdnegf.md +73 -0
  787. package/src/skills/science/references/packages/tenpy.md +73 -0
  788. package/src/skills/science/references/packages/thermo.md +73 -0
  789. package/src/skills/science/references/packages/tkwant.md +73 -0
  790. package/src/skills/science/references/packages/tvb-root.md +73 -0
  791. package/src/skills/science/references/packages/uproot5.md +73 -0
  792. package/src/skills/science/references/packages/vampire.md +80 -0
  793. package/src/skills/science/references/packages/wannier_tools.md +73 -0
  794. package/src/skills/science/references/packages/warpx.md +80 -0
  795. package/src/skills/science/references/packages/wrf.md +73 -0
  796. package/src/skills/science/references/packages/xtb.md +88 -0
  797. package/src/skills/science/references/packages/yt.md +73 -0
  798. package/src/skills/science/references/science-task-brief-template.md +71 -0
  799. package/src/skills/scout/SKILL.md +83 -425
  800. package/src/skills/scout/references/literature-scout-template.md +5 -24
  801. package/src/skills/scout/references/operational-guidance.md +191 -0
  802. package/src/skills/scout/references/paper-triage-playbook.md +11 -35
  803. package/src/skills/write/SKILL.md +744 -1246
  804. package/src/skills/write/references/experiments_analysis_patterns.md +129 -0
  805. package/src/skills/write/references/oral_package_patterns.md +252 -0
  806. package/src/skills/write/references/oral_writing_principles.md +291 -0
  807. package/src/skills/write/references/section_rewrite_checklist.md +234 -0
  808. package/src/tui/dist/app/AppContainer.js +1314 -27
  809. package/src/tui/dist/components/Composer.js +26 -1
  810. package/src/tui/dist/components/ConfigScreen.js +2 -1
  811. package/src/tui/dist/components/InputPrompt.js +25 -9
  812. package/src/tui/dist/components/MainContent.js +18 -3
  813. package/src/tui/dist/components/QuestScreen.js +3 -2
  814. package/src/tui/dist/components/UtilityScreen.js +37 -0
  815. package/src/tui/dist/hooks/useSafeInput.js +10 -0
  816. package/src/tui/dist/index.js +13 -1
  817. package/src/tui/dist/layouts/DefaultAppLayout.js +11 -8
  818. package/src/tui/dist/lib/api.js +89 -1
  819. package/src/tui/package.json +1 -1
  820. package/src/ui/dist/assets/{AnalysisPlugin-DnSm0GZn.js → AnalysisPlugin-CA94NGmI.js} +1 -1
  821. package/src/ui/dist/assets/CliPlugin-DHBzphZU.js +79 -0
  822. package/src/ui/dist/assets/CodeEditorPlugin-BOFwD2rn.js +2 -0
  823. package/src/ui/dist/assets/{CodeViewerPlugin-itb0tltR.js → CodeViewerPlugin-CqDpgjik.js} +4 -4
  824. package/src/ui/dist/assets/{DocViewerPlugin-DqKkiCI6.js → DocViewerPlugin-UDBgt8-4.js} +3 -3
  825. package/src/ui/dist/assets/GitCommitViewerPlugin-BmHtZ0bZ.js +6 -0
  826. package/src/ui/dist/assets/{GitDiffViewerPlugin-DxL2ezFG.js → GitDiffViewerPlugin-CAxjNorQ.js} +2 -2
  827. package/src/ui/dist/assets/{GitSnapshotViewer-B_RQm1YZ.js → GitSnapshotViewer-CweA6VON.js} +2 -2
  828. package/src/ui/dist/assets/{ImageViewerPlugin-tHqlXY3n.js → ImageViewerPlugin-C8wHGvGN.js} +5 -5
  829. package/src/ui/dist/assets/LabPlugin-COyyLUol.js +32 -0
  830. package/src/ui/dist/assets/{LatexPlugin-B495DTXC.js → LatexPlugin-BQjAaA5J.js} +4 -4
  831. package/src/ui/dist/assets/{MarkdownViewerPlugin-DG28-61B.js → MarkdownViewerPlugin-Dy1NE2dI.js} +3 -3
  832. package/src/ui/dist/assets/{MarketplacePlugin-BiOGT-Kj.js → MarketplacePlugin-DMIZtEJ2.js} +2 -2
  833. package/src/ui/dist/assets/NotebookEditor-CFHMq_Qt.js +91 -0
  834. package/src/ui/dist/assets/{NotebookEditor-CVsj8h_T.js → NotebookEditor-WFyd8Ybt.js} +23 -23
  835. package/src/ui/dist/assets/{PdfLoader-CASDQmxJ.js → PdfLoader-CLE5u5TS.js} +3 -3
  836. package/src/ui/dist/assets/{PdfMarkdownPlugin-BFhwoKsY.js → PdfMarkdownPlugin-_iNK_H83.js} +1 -1
  837. package/src/ui/dist/assets/PdfViewerPlugin-DgWsbInT.js +22 -0
  838. package/src/ui/dist/assets/SearchPlugin-DrZmn5iw.js +11 -0
  839. package/src/ui/dist/assets/{TextViewerPlugin-CB4DYfWO.js → TextViewerPlugin-D1-T3aC7.js} +4 -4
  840. package/src/ui/dist/assets/branding/runner-claude.svg +107 -0
  841. package/src/ui/dist/assets/branding/runner-codex.svg +10 -0
  842. package/src/ui/dist/assets/branding/runner-kimi.svg +14 -0
  843. package/src/ui/dist/assets/branding/runner-opencode.svg +7 -0
  844. package/src/ui/dist/assets/cli-store-CoZ-x5Ip.js +1 -0
  845. package/src/ui/dist/assets/{code-DLC6G24T.js → code-DbsmSd3Y.js} +1 -1
  846. package/src/ui/dist/assets/file-diff-panel-DsvyRz47.js +1 -0
  847. package/src/ui/dist/assets/{wrap-text-CwMn-iqb.js → file-jump-queue-DeQBikaw.js} +3 -3
  848. package/src/ui/dist/assets/{file-socket-Cu4Qln7Y.js → file-socket-DA5XIx88.js} +1 -1
  849. package/src/ui/dist/assets/fonts/ds-fonts.css +50 -4
  850. package/src/ui/dist/assets/images/deepxiv/register-guide.png +0 -0
  851. package/src/ui/dist/assets/index-39vY9LmZ.js +1 -0
  852. package/src/ui/dist/assets/{index-wQ7RIIRd.js → index-BsO46tJA.js} +1 -1
  853. package/src/ui/dist/assets/index-CHzJ2xtB.js +3530 -0
  854. package/src/ui/dist/assets/index-DH-zxoZ3.css +33 -0
  855. package/src/ui/dist/assets/{plugin-notebook-HbW2K-1c.js → plugin-notebook-JRhysCqj.js} +2 -2
  856. package/src/ui/dist/assets/{project-sync-CsX08Qno.js → project-sync-DPmWKmKD.js} +1 -1
  857. package/src/ui/dist/assets/{zoom-out-R-GWEhzS.js → zoom-out-DAukFWen.js} +3 -3
  858. package/src/ui/dist/index.html +3 -3
  859. package/src/skills/analysis-campaign/references/artifact-orchestration.md +0 -58
  860. package/src/skills/baseline/references/memory-playbook.md +0 -40
  861. package/src/skills/baseline/references/publishable-baseline-package.md +0 -30
  862. package/src/skills/write/references/outline-evidence-contract-example.md +0 -107
  863. package/src/skills/write/references/paper-experiment-matrix-template.md +0 -131
  864. package/src/skills/write/references/paper-section-playbook.md +0 -64
  865. package/src/skills/write/references/reviewer-first-writing.md +0 -64
  866. package/src/skills/write/references/revision-checklist.md +0 -70
  867. package/src/skills/write/references/section-contracts.md +0 -82
  868. package/src/skills/write/references/sentence-level-proofing.md +0 -49
  869. package/src/ui/dist/assets/AiManusChatView-COFACy7V.js +0 -204
  870. package/src/ui/dist/assets/CliPlugin-CvwCmDQ5.js +0 -109
  871. package/src/ui/dist/assets/CodeEditorPlugin-cOqSa0xq.js +0 -2
  872. package/src/ui/dist/assets/GitCommitViewerPlugin-DVgNHBCS.js +0 -1
  873. package/src/ui/dist/assets/LabCopilotPanel-ClMbq5Yu.js +0 -14
  874. package/src/ui/dist/assets/LabPlugin-L_SuE8ow.js +0 -22
  875. package/src/ui/dist/assets/NotebookEditor-C-4Kt1p9.js +0 -81
  876. package/src/ui/dist/assets/PdfViewerPlugin-DcOzU9vd.js +0 -17
  877. package/src/ui/dist/assets/SearchPlugin-CHj7M58O.js +0 -16
  878. package/src/ui/dist/assets/VNCViewer-CjlbyCB3.js +0 -11
  879. package/src/ui/dist/assets/bot-CFkZY-JP.js +0 -6
  880. package/src/ui/dist/assets/chevron-up-Dq5ofbht.js +0 -6
  881. package/src/ui/dist/assets/file-content-Dv4LoZec.js +0 -1
  882. package/src/ui/dist/assets/file-diff-panel-Denq-lC3.js +0 -1
  883. package/src/ui/dist/assets/file-jump-queue-DA-SdG__.js +0 -1
  884. package/src/ui/dist/assets/git-commit-horizontal-BUh6G52n.js +0 -6
  885. package/src/ui/dist/assets/image-B9HUUddG.js +0 -6
  886. package/src/ui/dist/assets/index-B2B1sg-M.js +0 -1
  887. package/src/ui/dist/assets/index-Cgla8biy.css +0 -33
  888. package/src/ui/dist/assets/index-DRyx7vAc.js +0 -1
  889. package/src/ui/dist/assets/index-Gbl53BNp.js +0 -2496
  890. package/src/ui/dist/assets/pdf-effect-queue-ZtnHFCAi.js +0 -6
  891. package/src/ui/dist/assets/popover-DL6h35vr.js +0 -1
  892. package/src/ui/dist/assets/select-DvmXt1yY.js +0 -11
  893. package/src/ui/dist/assets/sigma-7jpXazui.js +0 -6
  894. package/src/ui/dist/assets/trash-xA7kFt8i.js +0 -11
  895. package/src/ui/dist/assets/useCliAccess-DsMwDjOp.js +0 -1
  896. package/src/ui/dist/assets/useFileDiffOverlay-FuhcnKiw.js +0 -1
@@ -0,0 +1,224 @@
1
+ id: aisb.t3.056_infosam
2
+ name: 'InfoSAM: Fine-Tuning the Segment Anything Model from An Information-Theoretic
3
+ Perspective'
4
+ version: 0.1.0
5
+ one_line: Information-theoretic SAM fine-tuning via mutual-information-based distillation
6
+ preserving domain-invariant relational knowledge for specialized segmentation.
7
+ task_description: 'InfoSAM is a parameter-efficient fine-tuning (PEFT) framework for
8
+ SAM that enhances segmentation performance in specialized domains by preserving
9
+ pre-trained domain-invariant knowledge through information-theoretic distillation.
10
+ The method introduces two novel mutual information-based objectives: (1) a relational
11
+ compression loss that extracts domain-invariant structural patterns from pre-trained
12
+ SAM by minimizing mutual information between task-irrelevant features and the relational
13
+ module outputs, and (2) a cross-model distillation loss that maximizes mutual information
14
+ between teacher (pre-trained SAM) and student (fine-tuned SAM) relational representations.
15
+ The approach uses attention-driven relation modules and Renyi entropy-based quantification
16
+ with normalized Gram matrices computed via Frobenius norm. Benchmarked across diverse
17
+ domains including natural images, medical imaging, agriculture (leaf disease), and
18
+ remote sensing.
19
+
20
+ '
21
+ task_mode: experiment_driven
22
+ requires_execution: true
23
+ requires_paper: true
24
+ integrity_level: cas_plus_canary
25
+ snapshot_status: external_eval_required
26
+ support_level: recovery
27
+ time_band: 1-2d
28
+ cost_band: high
29
+ difficulty: hard
30
+ data_access: public
31
+ primary_outputs:
32
+ - s_measure
33
+ - e_measure
34
+ - weighted_f_measure
35
+ - infosam_checkpoint
36
+ - segmentation_results
37
+ launch_profiles:
38
+ - id: train_only
39
+ label: Train Only
40
+ description: Run InfoSAM fine-tuning with information-theoretic distillation loss
41
+ on specified dataset.
42
+ - id: eval_only
43
+ label: Evaluation Only
44
+ description: Evaluate fine-tuned model using S-measure, E-measure, and weighted
45
+ F-measure.
46
+ - id: full_pipeline
47
+ label: Full Pipeline
48
+ description: Complete training and evaluation pipeline with checkpoint management.
49
+ dataset_download:
50
+ primary_method: mixed
51
+ sources:
52
+ - kind: github_repo
53
+ url: https://github.com/autogluon/autogluon/tree/master/examples/automm/Conv-LoRA
54
+ access: public
55
+ note: Datasets sourced from Conv-LoRA repository covering multiple segmentation
56
+ domains
57
+ - kind: huggingface_model
58
+ url: https://huggingface.co/MuyaoYuan/InfoSAM/tree/main
59
+ access: public
60
+ note: Pre-trained InfoSAM checkpoints available for direct use
61
+ - kind: facebook_ai
62
+ url: https://dl.fbaipublicfiles.com/segment_anything/
63
+ access: public
64
+ note: Pre-trained SAM teacher models (ViT-B, ViT-H, ViT-L) required for training
65
+ notes:
66
+ - The current local snapshot does not include the `data/data_download.py` script
67
+ referenced in README
68
+ - Dataset acquisition requires reconstruction from Conv-LoRA external route
69
+ - Shell scripts `config/train/InfoSAM_b_leaf.sh` and `config/eval/InfoSAM_b_leaf.sh`
70
+ referenced in README are absent from snapshot
71
+ credential_requirements:
72
+ mode: none
73
+ items: []
74
+ notes:
75
+ - No explicit API credentials or dataset access tokens detected in bundled materials
76
+ - HuggingFace model access is public
77
+ - Facebook AI SAM checkpoint downloads are public
78
+ resources:
79
+ minimum:
80
+ cpu_cores: 16
81
+ ram_gb: 64
82
+ disk_gb: 100
83
+ gpu_count: 1
84
+ gpu_vram_gb: 24
85
+ recommended:
86
+ cpu_cores: 32
87
+ ram_gb: 128
88
+ disk_gb: 200
89
+ gpu_count: 1
90
+ gpu_vram_gb: 48
91
+ environment:
92
+ python: '3.8'
93
+ cuda: '12.1'
94
+ pytorch: 2.4.1
95
+ flash_attn: null
96
+ key_packages:
97
+ - torchvision==0.19.1
98
+ - transformers
99
+ - pillow
100
+ - numpy
101
+ - opencv-python
102
+ - scipy
103
+ notes:
104
+ - Tested environment: Python 3.8.20, PyTorch 2.4.1, torchvision 0.19.1, CUDA 12.1
105
+ on Ubuntu 20.04
106
+ - Environment specifications derived from README documentation; end-to-end execution
107
+ requires restoration of missing launcher scripts
108
+ risk_flags:
109
+ - source_snapshot_incomplete
110
+ - launch_scripts_missing
111
+ - dataset_download_script_absent
112
+ risk_notes:
113
+ - Current snapshot preserves documentation (README, OPTIMIZATION.md, AGENTS.md, latex.md)
114
+ but lacks executable train/eval launcher trees
115
+ - Missing `data/data_download.py` script required for dataset preparation
116
+ - Missing `config/train/InfoSAM_b_leaf.sh` and `config/eval/InfoSAM_b_leaf.sh` for
117
+ training and evaluation
118
+ - Treat as paper-backed reconstruction target; full execution requires upstream script
119
+ restoration from official repository
120
+ recommended_when: 'Use this benchmark to reconstruct and audit the InfoSAM PEFT methodology
121
+ for SAM adaptation. Suitable for researchers investigating information-theoretic
122
+ distillation for vision foundation models, relational knowledge transfer, and domain-invariant
123
+ segmentation. Prepare to restore missing training and evaluation scripts from the
124
+ official repository.
125
+
126
+ '
127
+ not_recommended_when: 'Do not use as a ready-to-run local benchmark. The current snapshot
128
+ is incomplete relative to the official README. Full execution requires restoring
129
+ missing launcher scripts, download utilities, and configuration files from the upstream
130
+ InfoSAM repository before the benchmark becomes operational.
131
+
132
+ '
133
+ paper:
134
+ title: 'InfoSAM: Fine-Tuning the Segment Anything Model from An Information-Theoretic
135
+ Perspective'
136
+ venue: ICML 2025 Spotlight
137
+ year: 2025
138
+ url: https://proceedings.mlr.press/v267/zhang25ct.html
139
+ arxiv_url: https://arxiv.org/pdf/2505.21920
140
+ project_page: https://muyaoyuan.github.io/InfoSAM_Page
141
+ authors:
142
+ - Yuanhong Zhang
143
+ - Muyao Yuan
144
+ - Weizhan Zhang
145
+ - Tieliang Gong
146
+ - Wen Wen
147
+ - Jiangyong Ying
148
+ - Weijie Shi
149
+ download:
150
+ url: https://github.com/ResearAI/DeepScientist/releases/download/aisb-v0.0.1/aisb.t3.056_infosam.zip
151
+ archive_type: zip
152
+ local_dir_name: paper-56-InfoSAM
153
+ provider: github_release
154
+ repo: ResearAI/DeepScientist
155
+ tag: aisb-v0.0.1
156
+ asset_name: aisb.t3.056_infosam.zip
157
+ sha256: 6339252a6968df0ec70cdac20e1eb44e1eeae9f33b3b6386513a2772d1e51ba9
158
+ size_bytes: 45688
159
+ display:
160
+ palette_seed: gold-forest-segment
161
+ art_style: info-geometry
162
+ accent_priority: high
163
+ domain_tags:
164
+ - computer_vision
165
+ - segmentation
166
+ - foundation_models
167
+ - distillation
168
+ - parameter_efficient_finetuning
169
+ - information_theory
170
+ image_path: ../../../AISB/image/056_aisb.t3.056_infosam.jpg
171
+ capability_tags:
172
+ - research_code_optimization
173
+ - computer_vision
174
+ - segmentation
175
+ - foundation_models
176
+ - distillation
177
+ - parameter_efficient_finetuning
178
+ - mutual_information
179
+ - knowledge_distillation
180
+ aisb_direction: T3
181
+ track_fit:
182
+ - paper_track
183
+ - benchmark_track
184
+ metric_contracts:
185
+ s_measure:
186
+ description: Structure measure for foreground segmentation quality evaluation
187
+ origin: paper_evaluation
188
+ blocked_reason: No executable evaluation code anchor in current snapshot
189
+ e_measure:
190
+ description: Enhanced alignment measure for boundary and region evaluation
191
+ origin: paper_evaluation
192
+ blocked_reason: No executable evaluation code anchor in current snapshot
193
+ weighted_f_measure:
194
+ description: Weighted F-measure combining precision and recall with optimal threshold
195
+ selection
196
+ origin: paper_evaluation
197
+ blocked_reason: No executable evaluation code anchor in current snapshot
198
+ external_models:
199
+ teacher_models:
200
+ - model_id: sam_vit_b
201
+ url: https://dl.fbaipublicfiles.com/segment_anything/sam_vit_b_01ec64.pth
202
+ description: ViT-Base SAM model (default teacher)
203
+ - model_id: sam_vit_h
204
+ url: https://dl.fbaipublicfiles.com/segment_anything/sam_vit_h_4b8939.pth
205
+ description: ViT-Huge SAM model
206
+ - model_id: sam_vit_l
207
+ url: https://dl.fbaipublicfiles.com/segment_anything/sam_vit_l_0b3195.pth
208
+ description: ViT-Large SAM model
209
+ pretrained_checkpoints:
210
+ - model_id: infosam_finetuned
211
+ url: https://huggingface.co/MuyaoYuan/InfoSAM/tree/main
212
+ description: Pre-trained InfoSAM checkpoints on HuggingFace
213
+ access: public
214
+ restoration_required:
215
+ - data/data_download.py
216
+ - config/train/InfoSAM_b_leaf.sh
217
+ - config/eval/InfoSAM_b_leaf.sh
218
+ - requirements.txt
219
+ - launcher scripts referenced in README
220
+ restoration_notes: 'The official repository contains complete training and evaluation
221
+ scripts. Reconstruction involves cloning the upstream repository or restoring the
222
+ referenced shell scripts and download utilities to achieve a fully operational benchmark.
223
+
224
+ '
@@ -0,0 +1,189 @@
1
+ id: aisb.t3.056_infosam
2
+ name: 'InfoSAM: Fine-Tuning the Segment Anything Model from An Information-Theoretic
3
+ Perspective'
4
+ version: 0.1.0
5
+ one_line: |
6
+ 基于信息论的SAM微调方法,通过互信息蒸馏保留领域无关的关系知识,用于专业分割任务。
7
+ task_description: |
8
+ InfoSAM是一种用于SAM的参数高效微调(PEFT)框架,通过信息论蒸馏保留预训练领域无关知识,从而提升专业领域的分割性能。该方法引入两个基于互信息的新目标:(1)关系压缩损失,通过最小化任务无关特征与关系模块输出之间的互信息,从预训练SAM中提取领域无关的结构模式;(2)跨模型蒸馏损失,最大化教师(预训练SAM)与学生(微调后SAM)关系表示之间的互信息。该方法使用注意力驱动的关系模块和基于Renyi熵的量化,通过Frobenius范数计算的归一化Gram矩阵。在包括自然图像、医学影像、农业(叶片病害)和遥感在内的多个领域进行了基准测试。
9
+ task_mode: experiment_driven
10
+ requires_execution: true
11
+ requires_paper: true
12
+ integrity_level: cas_plus_canary
13
+ snapshot_status: external_eval_required
14
+ support_level: recovery
15
+ time_band: 1-2d
16
+ cost_band: high
17
+ difficulty: hard
18
+ data_access: public
19
+ primary_outputs:
20
+ - s_measure
21
+ - e_measure
22
+ - weighted_f_measure
23
+ - infosam_checkpoint
24
+ - segmentation_results
25
+ launch_profiles:
26
+ - id: train_only
27
+ label: 仅训练
28
+ description: 使用信息论蒸馏损失在指定数据集上运行InfoSAM微调。
29
+ - id: eval_only
30
+ label: 仅评估
31
+ description: 使用S-measure、E-measure和加权F-measure评估微调后的模型。
32
+ - id: full_pipeline
33
+ label: 完整流程
34
+ description: 包含检查点管理的完整训练和评估流程。
35
+ dataset_download:
36
+ primary_method: mixed
37
+ sources:
38
+ - kind: github_repo
39
+ url: https://github.com/autogluon/autogluon/tree/master/examples/automm/Conv-LoRA
40
+ access: public
41
+ note: 数据集来源于Conv-LoRA仓库,覆盖多个分割领域
42
+ - kind: huggingface_model
43
+ url: https://huggingface.co/MuyaoYuan/InfoSAM/tree/main
44
+ access: public
45
+ note: 预训练的InfoSAM检查点,可直接使用
46
+ - kind: facebook_ai
47
+ url: https://dl.fbaipublicfiles.com/segment_anything/
48
+ access: public
49
+ note: 训练所需的预训练SAM教师模型(ViT-B、ViT-H、ViT-L)
50
+ notes:
51
+ - 当前本地快照不包含README中引用的`data/data_download.py`脚本
52
+ - 数据集获取需要从Conv-LoRA外部路径重建
53
+ - README中引用的shell脚本`config/train/InfoSAM_b_leaf.sh`和`config/eval/InfoSAM_b_leaf.sh`在快照中缺失
54
+ credential_requirements:
55
+ mode: none
56
+ items: []
57
+ notes:
58
+ - 在打包材料中未检测到明确的API凭据或数据集访问令牌
59
+ - HuggingFace模型访问是公开的
60
+ - Facebook AI SAM检查点下载是公开的
61
+ resources:
62
+ minimum:
63
+ cpu_cores: 16
64
+ ram_gb: 64
65
+ disk_gb: 100
66
+ gpu_count: 1
67
+ gpu_vram_gb: 24
68
+ recommended:
69
+ cpu_cores: 32
70
+ ram_gb: 128
71
+ disk_gb: 200
72
+ gpu_count: 1
73
+ gpu_vram_gb: 48
74
+ environment:
75
+ python: '3.8'
76
+ cuda: '12.1'
77
+ pytorch: 2.4.1
78
+ flash_attn: null
79
+ key_packages:
80
+ - torchvision==0.19.1
81
+ - transformers
82
+ - pillow
83
+ - numpy
84
+ - opencv-python
85
+ - scipy
86
+ notes:
87
+ - 测试环境:Ubuntu 20.04上的Python 3.8.20、PyTorch 2.4.1、torchvision 0.19.1、CUDA 12.1
88
+ - 环境规格来源于README文档;端到端执行需要恢复缺失的启动脚本
89
+ risk_flags:
90
+ - source_snapshot_incomplete
91
+ - launch_scripts_missing
92
+ - dataset_download_script_absent
93
+ risk_notes:
94
+ - 当前快照保留了文档(README、OPTIMIZATION.md、AGENTS.md、latex.md)但缺少可执行的训练/评估启动器树
95
+ - 缺少数据集准备所需的`data/data_download.py`脚本
96
+ - 缺少训练和评估所需的`config/train/InfoSAM_b_leaf.sh`和`config/eval/InfoSAM_b_leaf.sh`
97
+ - 视为基于论文的重建目标;完整执行需要从官方仓库恢复上游脚本
98
+ recommended_when: |
99
+ 使用此基准来重建和审计InfoSAM PEFT方法论以实现SAM适配。适合研究信息论蒸馏用于视觉基础模型、关系知识迁移和领域无关分割的研究人员。请准备好从官方仓库恢复缺失的训练和评估脚本。
100
+ not_recommended_when: |
101
+ 不要用作可直接运行的本地基准。当前快照相对于官方README不完整。在基准可运行之前,需要从上游InfoSAM仓库恢复缺失的启动脚本、下载工具和配置文件。
102
+ paper:
103
+ title: 'InfoSAM: Fine-Tuning the Segment Anything Model from An Information-Theoretic
104
+ Perspective'
105
+ venue: ICML 2025 Spotlight
106
+ year: 2025
107
+ url: https://proceedings.mlr.press/v267/zhang25ct.html
108
+ arxiv_url: https://arxiv.org/pdf/2505.21920
109
+ project_page: https://muyaoyuan.github.io/InfoSAM_Page
110
+ authors:
111
+ - Yuanhong Zhang
112
+ - Muyao Yuan
113
+ - Weizhan Zhang
114
+ - Tieliang Gong
115
+ - Wen Wen
116
+ - Jiangyong Ying
117
+ - Weijie Shi
118
+ download:
119
+ url: https://github.com/ResearAI/DeepScientist/releases/download/aisb-v0.0.1/aisb.t3.056_infosam.zip
120
+ archive_type: zip
121
+ local_dir_name: paper-56-InfoSAM
122
+ provider: github_release
123
+ repo: ResearAI/DeepScientist
124
+ tag: aisb-v0.0.1
125
+ asset_name: aisb.t3.056_infosam.zip
126
+ sha256: 6339252a6968df0ec70cdac20e1eb44e1eeae9f33b3b6386513a2772d1e51ba9
127
+ size_bytes: 45688
128
+ display:
129
+ palette_seed: gold-forest-segment
130
+ art_style: info-geometry
131
+ accent_priority: high
132
+ domain_tags:
133
+ - computer_vision
134
+ - segmentation
135
+ - foundation_models
136
+ - distillation
137
+ - parameter_efficient_finetuning
138
+ - information_theory
139
+ image_path: ../../../AISB/image/056_aisb.t3.056_infosam.jpg
140
+ capability_tags:
141
+ - research_code_optimization
142
+ - computer_vision
143
+ - segmentation
144
+ - foundation_models
145
+ - distillation
146
+ - parameter_efficient_finetuning
147
+ - mutual_information
148
+ - knowledge_distillation
149
+ aisb_direction: T3
150
+ track_fit:
151
+ - paper_track
152
+ - benchmark_track
153
+ metric_contracts:
154
+ s_measure:
155
+ description: 用于前景分割质量评估的结构度量
156
+ origin: paper_evaluation
157
+ blocked_reason: 当前快照中无可执行的评估代码锚点
158
+ e_measure:
159
+ description: 用于边界和区域评估的增强对齐度量
160
+ origin: paper_evaluation
161
+ blocked_reason: 当前快照中无可执行的评估代码锚点
162
+ weighted_f_measure:
163
+ description: 结合精度和召回率并具有最优阈值选择的加权F度量
164
+ origin: paper_evaluation
165
+ blocked_reason: 当前快照中无可执行的评估代码锚点
166
+ external_models:
167
+ teacher_models:
168
+ - model_id: sam_vit_b
169
+ url: https://dl.fbaipublicfiles.com/segment_anything/sam_vit_b_01ec64.pth
170
+ description: ViT-Base SAM模型(默认教师)
171
+ - model_id: sam_vit_h
172
+ url: https://dl.fbaipublicfiles.com/segment_anything/sam_vit_h_4b8939.pth
173
+ description: ViT-Huge SAM模型
174
+ - model_id: sam_vit_l
175
+ url: https://dl.fbaipublicfiles.com/segment_anything/sam_vit_l_0b3195.pth
176
+ description: ViT-Large SAM模型
177
+ pretrained_checkpoints:
178
+ - model_id: infosam_finetuned
179
+ url: https://huggingface.co/MuyaoYuan/InfoSAM/tree/main
180
+ description: HuggingFace上的预训练InfoSAM检查点
181
+ access: public
182
+ restoration_required:
183
+ - data/data_download.py
184
+ - config/train/InfoSAM_b_leaf.sh
185
+ - config/eval/InfoSAM_b_leaf.sh
186
+ - requirements.txt
187
+ - launcher scripts referenced in README
188
+ restoration_notes: |
189
+ 官方仓库包含完整的训练和评估脚本。重建工作涉及克隆上游仓库或恢复引用的shell脚本和下载工具,以实现完全可运行的基准。
@@ -0,0 +1,129 @@
1
+ id: aisb.t3.057_mdreid
2
+ name: MDReID
3
+ version: 0.1.0
4
+ one_line: Two-stage multi-modal object re-identification with modality-decoupled feature
5
+ learning for any-to-any query-gallery modality combinations.
6
+ task_description: 'This packaged benchmark covers multi-modal object re-identification
7
+ with modality-decoupled feature handling and retrieval-time reranking. MDReID introduces
8
+ Modality Decoupling Learning (MDL) and Modality-aware Metric Learning (MML) to disentangle
9
+ modality-shared and modality-specific features, enabling effective retrieval under
10
+ both modality-matched and modality-mismatched query-gallery scenarios. Supports
11
+ three multi-spectral datasets: RGBNT201, RGBNT100, and MSVR310.
12
+
13
+ '
14
+ task_mode: experiment_driven
15
+ requires_execution: true
16
+ requires_paper: true
17
+ integrity_level: cas_plus_canary
18
+ snapshot_status: runnable
19
+ support_level: advanced
20
+ time_band: 6-24h
21
+ cost_band: high
22
+ difficulty: hard
23
+ data_access: public
24
+ primary_outputs:
25
+ - map
26
+ - rank1
27
+ - reid_checkpoint
28
+ launch_profiles:
29
+ - id: quick_eval
30
+ label: Quick Eval
31
+ description: Run one packaged multi-modal re-identification test route on a single
32
+ dataset using pre-trained checkpoints.
33
+ - id: full_train_eval
34
+ label: Full Train + Eval
35
+ description: Train the MDReID model from scratch and evaluate across all packaged
36
+ person/object re-identification datasets.
37
+ dataset_download:
38
+ primary_method: mixed
39
+ sources:
40
+ - name: RGBNT201
41
+ url: https://drive.google.com/drive/folders/1EscBadX-wMAT56_It5lXY-S3-b5nK1wH
42
+ type: google_drive
43
+ - name: RGBNT100
44
+ url: https://pan.baidu.com/s/1xqqhN4Lctm3RcUdskG0Ug
45
+ type: baidu_pan
46
+ access_code: rjin
47
+ - name: MSVR310
48
+ url: https://drive.google.com/file/d/1IxI-fGiluPO_Ies6YjDHeTEuVYhFdYwD/view
49
+ type: google_drive
50
+ - name: CLIP ViT-B-16 Pretrained
51
+ url: https://pan.baidu.com/s/1YPhaL0YgpI-TQ_pSzXHRKw
52
+ type: baidu_pan
53
+ access_code: 52fu
54
+ notes:
55
+ - Download all person datasets before training; modify dataset paths in config files
56
+ for RGBNT100 and MSVR310
57
+ - Pretrained CLIP ViT-B-16 required for backbone initialization
58
+ - Pre-trained model checkpoints available for RGBNT201, RGBNT100, and MSVR310
59
+ credential_requirements:
60
+ mode: none
61
+ items: []
62
+ notes: []
63
+ resources:
64
+ minimum:
65
+ cpu_cores: 8
66
+ ram_gb: 32
67
+ disk_gb: 150
68
+ gpu_count: 1
69
+ gpu_vram_gb: 16
70
+ recommended:
71
+ cpu_cores: 16
72
+ ram_gb: 64
73
+ disk_gb: 300
74
+ gpu_count: 1
75
+ gpu_vram_gb: 24
76
+ environment:
77
+ python: '3.8'
78
+ cuda: '11.3'
79
+ pytorch: 1.12.0
80
+ flash_attn: null
81
+ key_packages:
82
+ - torch-geometric==2.1.0
83
+ notes:
84
+ - CUDA 11.3 recommended; compatible with CUDA 11.x variants
85
+ - Install dependencies via requirements.txt
86
+ - Device ID configurable in config/defaults.py
87
+ - cudnn.benchmark enabled by default for training speed
88
+ risk_flags:
89
+ - large_dataset_storage
90
+ - multi_source_download
91
+ - baidu_pan_access_required
92
+ risk_notes:
93
+ - RGBNT100 and MSVR310 require Baidu Pan access with provided codes
94
+ - Large multi-modal image datasets require significant disk space for training
95
+ - No benchmark execution was performed during this packaging pass; runtime validation
96
+ recommended
97
+ recommended_when: 'Use this benchmark when you need a multimodal retrieval task with
98
+ real person and object re-identification datasets under varying modality conditions.
99
+ Ideal for research on cross-modal retrieval, modality generalization, and vision-language
100
+ feature decoupling in surveillance or heterogeneous sensor scenarios.
101
+
102
+ '
103
+ not_recommended_when: 'Do not use this if you cannot host large multi-modal image
104
+ datasets locally, if you need a text-centric or language-heavy benchmark, or if
105
+ you lack access to Baidu Pan for dataset downloads. Not recommended for single-GPU
106
+ memory below 16GB when training.
107
+
108
+ '
109
+ paper:
110
+ title: 'MDReID: Modality-Decoupled Learning for Any-to-Any Multi-Modal Object Re-Identification'
111
+ venue: NeurIPS 2025
112
+ year: 2025
113
+ url: https://openreview.net/forum?id=7jg26Fd1ra
114
+ code_url: https://github.com/stone96123/MDReID
115
+ download:
116
+ url: https://github.com/ResearAI/DeepScientist/releases/download/aisb-v0.0.1/aisb.t3.057_mdreid.zip
117
+ archive_type: zip
118
+ local_dir_name: paper-57-MDReID
119
+ provider: github_release
120
+ repo: ResearAI/DeepScientist
121
+ tag: aisb-v0.0.1
122
+ asset_name: aisb.t3.057_mdreid.zip
123
+ sha256: 443ff33a90ece8148f74b30103881c6835a07e69205d2d151c54fbc15215b9e8
124
+ size_bytes: 1554938
125
+ display:
126
+ palette_seed: crimson-cobalt-reid
127
+ art_style: retrieval-vision
128
+ accent_priority: high
129
+ image_path: ../image/057_aisb.t3.057_mdreid.jpg
@@ -0,0 +1,117 @@
1
+ id: aisb.t3.057_mdreid
2
+ name: MDReID
3
+ version: 0.1.0
4
+ one_line: >-
5
+ 两阶段多模态目标重识别,通过模态解耦特征学习支持任意到任意的查询-图库模态组合。
6
+ task_description: >-
7
+ 该封装基准测试涵盖多模态目标重识别任务,采用模态解耦特征处理和检索时重排序技术。
8
+ MDReID 提出了模态解耦学习(MDL)和模态感知度量学习(MML),将模态共享特征与模态特定特征分离,
9
+ 使模态匹配和模态不匹配的查询-图库场景下均能实现有效检索。支持三个多光谱数据集:RGBNT201、RGBNT100 和 MSVR310。
10
+ task_mode: experiment_driven
11
+ requires_execution: true
12
+ requires_paper: true
13
+ integrity_level: cas_plus_canary
14
+ snapshot_status: runnable
15
+ support_level: advanced
16
+ time_band: 6-24h
17
+ cost_band: high
18
+ difficulty: hard
19
+ data_access: public
20
+ primary_outputs:
21
+ - map
22
+ - rank1
23
+ - reid_checkpoint
24
+ launch_profiles:
25
+ - id: quick_eval
26
+ label: 快速评估
27
+ description: >-
28
+ 使用预训练权重在单一数据集上运行一条封装的多模态重识别测试流程。
29
+ - id: full_train_eval
30
+ label: 完整训练+评估
31
+ description: >-
32
+ 从头训练 MDReID 模型,并在所有封装的人员/物体重识别数据集上进行评估。
33
+ dataset_download:
34
+ primary_method: mixed
35
+ sources:
36
+ - name: RGBNT201
37
+ url: https://drive.google.com/drive/folders/1EscBadX-wMAT56_It5lXY-S3-b5nK1wH
38
+ type: google_drive
39
+ - name: RGBNT100
40
+ url: https://pan.baidu.com/s/1xqqhN4Lctm3RcUdskG0Ug
41
+ type: baidu_pan
42
+ access_code: rjin
43
+ - name: MSVR310
44
+ url: https://drive.google.com/file/d/1IxI-fGiluPO_Ies6YjDHeTEuVYhFdYwD/view
45
+ type: google_drive
46
+ - name: CLIP ViT-B-16 Pretrained
47
+ url: https://pan.baidu.com/s/1YPhaL0YgpI-TQ_pSzXHRKw
48
+ type: baidu_pan
49
+ access_code: 52fu
50
+ notes:
51
+ - 训练前请下载所有人员数据集;如使用 RGBNT100 和 MSVR310,需修改配置文件中的数据集路径
52
+ - 预训练的 CLIP ViT-B-16 是骨干网络初始化所必需的
53
+ - RGBNT201、RGBNT100 和 MSVR310 均提供预训练模型权重
54
+ credential_requirements:
55
+ mode: none
56
+ items: []
57
+ notes: []
58
+ resources:
59
+ minimum:
60
+ cpu_cores: 8
61
+ ram_gb: 32
62
+ disk_gb: 150
63
+ gpu_count: 1
64
+ gpu_vram_gb: 16
65
+ recommended:
66
+ cpu_cores: 16
67
+ ram_gb: 64
68
+ disk_gb: 300
69
+ gpu_count: 1
70
+ gpu_vram_gb: 24
71
+ environment:
72
+ python: '3.8'
73
+ cuda: '11.3'
74
+ pytorch: 1.12.0
75
+ flash_attn: null
76
+ key_packages:
77
+ - torch-geometric==2.1.0
78
+ notes:
79
+ - 推荐使用 CUDA 11.3;与 CUDA 11.x 系列兼容
80
+ - 通过 requirements.txt 安装依赖
81
+ - config/defaults.py 中可配置设备 ID
82
+ - 训练速度优化默认启用 cudnn.benchmark
83
+ risk_flags:
84
+ - large_dataset_storage
85
+ - multi_source_download
86
+ - baidu_pan_access_required
87
+ risk_notes:
88
+ - RGBNT100 和 MSVR310 需要使用提供的提取码访问百度云盘
89
+ - 大型多模态图像数据集需要大量磁盘空间用于训练
90
+ - 本次封装过程未执行基准测试;建议进行运行时验证
91
+ recommended_when: >-
92
+ 当您需要针对真实人员和物体重识别数据集在不同模态条件下进行多模态检索任务时使用此基准测试。
93
+ 适用于监控或异构传感器场景下的跨模态检索、模态泛化以及视觉-语言特征解耦研究。
94
+ not_recommended_when: >-
95
+ 若您无法在本地托管大型多模态图像数据集,或需要以文本为中心、语言密集型的基准测试,
96
+ 或无法访问百度云盘下载数据集,请勿使用。训练时单卡显存低于 16GB 不推荐使用。
97
+ paper:
98
+ title: 'MDReID: Modality-Decoupled Learning for Any-to-Any Multi-Modal Object Re-Identification'
99
+ venue: NeurIPS 2025
100
+ year: 2025
101
+ url: https://openreview.net/forum?id=7jg26Fd1ra
102
+ code_url: https://github.com/stone96123/MDReID
103
+ download:
104
+ url: https://github.com/ResearAI/DeepScientist/releases/download/aisb-v0.0.1/aisb.t3.057_mdreid.zip
105
+ archive_type: zip
106
+ local_dir_name: paper-57-MDReID
107
+ provider: github_release
108
+ repo: ResearAI/DeepScientist
109
+ tag: aisb-v0.0.1
110
+ asset_name: aisb.t3.057_mdreid.zip
111
+ sha256: 443ff33a90ece8148f74b30103881c6835a07e69205d2d151c54fbc15215b9e8
112
+ size_bytes: 1554938
113
+ display:
114
+ palette_seed: crimson-cobalt-reid
115
+ art_style: retrieval-vision
116
+ accent_priority: high
117
+ image_path: ../image/057_aisb.t3.057_mdreid.jpg