@nfdi4plants/arctrl 3.0.0-beta.2 → 3.0.0-beta.3

package/dist/ts/cjs/ts/Spreadsheet/ArcRun.js

@@ -1,177 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.ArcRun_fromRows = ArcRun_fromRows;
-exports.ArcRun_toRows = ArcRun_toRows;
-exports.ArcRun_toMetadataSheet = ArcRun_toMetadataSheet;
-exports.ArcRun_fromMetadataSheet = ArcRun_fromMetadataSheet;
-exports.ArcRun_toMetadataCollection = ArcRun_toMetadataCollection;
-exports.ArcRun_fromMetadataCollection = ArcRun_fromMetadataCollection;
-exports.ArcRun_isMetadataSheetName = ArcRun_isMetadataSheetName;
-exports.ArcRun_isMetadataSheet = ArcRun_isMetadataSheet;
-exports.ArcRun_tryGetMetadataSheet = ArcRun_tryGetMetadataSheet;
-exports.ARCtrl_ArcRun__ArcRun_fromFsWorkbook_Static_32154C9D = ARCtrl_ArcRun__ArcRun_fromFsWorkbook_Static_32154C9D;
-exports.ARCtrl_ArcRun__ArcRun_toFsWorkbook_Static_Z3EFAF6F8 = ARCtrl_ArcRun__ArcRun_toFsWorkbook_Static_Z3EFAF6F8;
-exports.ARCtrl_ArcRun__ArcRun_ToFsWorkbook = ARCtrl_ArcRun__ArcRun_ToFsWorkbook;
-const Util_js_1 = require("@fable-org/fable-library-js/Util.js");
-const Run_js_1 = require("./Metadata/Run.js");
-const Option_js_1 = require("@fable-org/fable-library-js/Option.js");
-const List_js_1 = require("@fable-org/fable-library-js/List.js");
-const ArcTypes_js_1 = require("../Core/ArcTypes.js");
-const Contacts_js_1 = require("./Metadata/Contacts.js");
-const Identifier_js_1 = require("../Core/Helper/Identifier.js");
-const SparseTable_js_1 = require("./Metadata/SparseTable.js");
-const Seq_js_1 = require("@fable-org/fable-library-js/Seq.js");
-const FsWorksheet_fs_js_1 = require("../fable_modules/FsSpreadsheet.6.3.1/FsWorksheet.fs.js");
-const String_js_1 = require("@fable-org/fable-library-js/String.js");
-const FsWorkbook_fs_js_1 = require("../fable_modules/FsSpreadsheet.6.3.1/FsWorkbook.fs.js");
-const ArcTable_js_1 = require("./AnnotationTable/ArcTable.js");
-const DataMapTable_js_1 = require("./DataMapTable/DataMapTable.js");
-function ArcRun_fromRows(rows) {
-    const en = (0, Util_js_1.getEnumerator)(rows);
-    const loop = (lastRow_mut, run_mut, performers_mut, rowNumber_mut) => {
-        loop: while (true) {
-            const lastRow = lastRow_mut, run = run_mut, performers = performers_mut, rowNumber = rowNumber_mut;
-            let matchResult, prefix_2, prefix_3;
-            if (lastRow != null) {
-                switch ((0, Option_js_1.value)(lastRow)) {
-                    case "RUN": {
-                        matchResult = 0;
-                        prefix_2 = (0, Option_js_1.value)(lastRow);
-                        break;
-                    }
-                    case "RUN PERFORMERS": {
-                        matchResult = 1;
-                        prefix_3 = (0, Option_js_1.value)(lastRow);
-                        break;
-                    }
-                    default:
-                        matchResult = 2;
-                }
-            }
-            else {
-                matchResult = 2;
-            }
-            switch (matchResult) {
-                case 0: {
-                    const patternInput = (0, Run_js_1.fromRows)(rowNumber + 1, en);
-                    lastRow_mut = patternInput[0];
-                    run_mut = patternInput[3];
-                    performers_mut = performers;
-                    rowNumber_mut = patternInput[1];
-                    continue loop;
-                }
-                case 1: {
-                    const patternInput_1 = (0, Contacts_js_1.fromRows)("Run Person", rowNumber + 1, en);
-                    lastRow_mut = patternInput_1[0];
-                    run_mut = run;
-                    performers_mut = patternInput_1[3];
-                    rowNumber_mut = patternInput_1[1];
-                    continue loop;
-                }
-                default:
-                    if (run != null) {
-                        const run_2 = (0, Option_js_1.value)(run);
-                        run_2.Performers = Array.from(performers);
-                        return run_2;
-                    }
-                    else {
-                        return ArcTypes_js_1.ArcRun.create((0, Identifier_js_1.createMissingIdentifier)(), undefined, undefined, undefined, undefined, undefined, undefined, undefined, undefined, Array.from(performers));
-                    }
-            }
-            break;
-        }
-    };
-    if (en["System.Collections.IEnumerator.MoveNext"]()) {
-        return loop((0, SparseTable_js_1.SparseRowModule_tryGetValueAt)(0, en["System.Collections.Generic.IEnumerator`1.get_Current"]()), undefined, (0, List_js_1.empty)(), 1);
-    }
-    else {
-        throw new Error("empty run metadata sheet");
-    }
-}
-function ArcRun_toRows(run) {
-    return (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)((0, Seq_js_1.singleton)((0, SparseTable_js_1.SparseRowModule_fromValues)(["RUN"])), (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)((0, Run_js_1.toRows)(run), (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)((0, Seq_js_1.singleton)((0, SparseTable_js_1.SparseRowModule_fromValues)(["RUN PERFORMERS"])), (0, Seq_js_1.delay)(() => (0, Contacts_js_1.toRows)("Run Person", (0, List_js_1.ofSeq)(run.Performers)))))))));
-}
-function ArcRun_toMetadataSheet(run) {
-    const sheet = new FsWorksheet_fs_js_1.FsWorksheet("isa_run");
-    (0, Seq_js_1.iterateIndexed)((rowI, r) => {
-        (0, SparseTable_js_1.SparseRowModule_writeToSheet)(rowI + 1, r, sheet);
-    }, ArcRun_toRows(run));
-    return sheet;
-}
-function ArcRun_fromMetadataSheet(sheet) {
-    try {
-        return ArcRun_fromRows((0, Seq_js_1.map)(SparseTable_js_1.SparseRowModule_fromFsRow, sheet.Rows));
-    }
-    catch (err) {
-        const arg = err.message;
-        return (0, String_js_1.toFail)((0, String_js_1.printf)("Failed while parsing metadatasheet: %s"))(arg);
-    }
-}
-function ArcRun_toMetadataCollection(run) {
-    return (0, Seq_js_1.map)(SparseTable_js_1.SparseRowModule_getAllValues, ArcRun_toRows(run));
-}
-function ArcRun_fromMetadataCollection(collection) {
-    try {
-        return ArcRun_fromRows((0, Seq_js_1.map)(SparseTable_js_1.SparseRowModule_fromAllValues, collection));
-    }
-    catch (err) {
-        const arg = err.message;
-        return (0, String_js_1.toFail)((0, String_js_1.printf)("Failed while parsing metadatasheet: %s"))(arg);
-    }
-}
-function ArcRun_isMetadataSheetName(name) {
-    return name === "isa_run";
-}
-function ArcRun_isMetadataSheet(sheet) {
-    return ArcRun_isMetadataSheetName(sheet.Name);
-}
-function ArcRun_tryGetMetadataSheet(doc) {
-    return (0, Seq_js_1.tryFind)(ArcRun_isMetadataSheet, doc.GetWorksheets());
-}
-/**
- * Reads an run from a spreadsheet
- */
-function ARCtrl_ArcRun__ArcRun_fromFsWorkbook_Static_32154C9D(doc) {
-    try {
-        let runMetadata;
-        const matchValue = ArcRun_tryGetMetadataSheet(doc);
-        if (matchValue == null) {
-            (0, String_js_1.toConsole)((0, String_js_1.printf)("Cannot retrieve metadata: Run file does not contain \"%s\" sheet."))("isa_run");
-            runMetadata = ArcTypes_js_1.ArcRun.create((0, Identifier_js_1.createMissingIdentifier)());
-        }
-        else {
-            runMetadata = ArcRun_fromMetadataSheet((0, Option_js_1.value)(matchValue));
-        }
-        const sheets = doc.GetWorksheets();
-        const annotationTables = (0, Seq_js_1.choose)(ArcTable_js_1.tryFromFsWorksheet, sheets);
-        const datamapSheet = (0, Seq_js_1.tryPick)(DataMapTable_js_1.tryFromFsWorksheet, sheets);
-        runMetadata.DataMap = datamapSheet;
-        if (!(0, Seq_js_1.isEmpty)(annotationTables)) {
-            runMetadata.Tables = Array.from(annotationTables);
-        }
-        return runMetadata;
-    }
-    catch (err) {
-        const arg_1 = err.message;
-        return (0, String_js_1.toFail)((0, String_js_1.printf)("Could not parse assay: \n%s"))(arg_1);
-    }
-}
-/**
- * Write a run to a spreadsheet
- */
-function ARCtrl_ArcRun__ArcRun_toFsWorkbook_Static_Z3EFAF6F8(run) {
-    const doc = new FsWorkbook_fs_js_1.FsWorkbook();
-    const metadataSheet = ArcRun_toMetadataSheet(run);
-    doc.AddWorksheet(metadataSheet);
-    (0, Seq_js_1.iterateIndexed)((i, arg) => {
-        const sheet = (0, ArcTable_js_1.toFsWorksheet)(i, arg);
-        doc.AddWorksheet(sheet);
-    }, run.Tables);
-    return doc;
-}
-/**
- * Write a run to a spreadsheet
- */
-function ARCtrl_ArcRun__ArcRun_ToFsWorkbook(this$) {
-    return ARCtrl_ArcRun__ArcRun_toFsWorkbook_Static_Z3EFAF6F8(this$);
-}

package/dist/ts/cjs/ts/Spreadsheet/ArcStudy.js

@@ -1,130 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.ArcStudy_toMetadataSheet = ArcStudy_toMetadataSheet;
-exports.ArcStudy_fromRows = ArcStudy_fromRows;
-exports.ArcStudy_fromMetadataSheet = ArcStudy_fromMetadataSheet;
-exports.ArcStudy_toMetadataCollection = ArcStudy_toMetadataCollection;
-exports.ArcStudy_fromMetadataCollection = ArcStudy_fromMetadataCollection;
-exports.ArcStudy_isMetadataSheetName = ArcStudy_isMetadataSheetName;
-exports.ArcStudy_isMetadataSheet = ArcStudy_isMetadataSheet;
-exports.ArcStudy_tryGetMetadataSheet = ArcStudy_tryGetMetadataSheet;
-exports.ARCtrl_ArcStudy__ArcStudy_fromFsWorkbook_Static_32154C9D = ARCtrl_ArcStudy__ArcStudy_fromFsWorkbook_Static_32154C9D;
-exports.ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522 = ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522;
-exports.ARCtrl_ArcStudy__ArcStudy_ToFsWorkbook_257FC1F0 = ARCtrl_ArcStudy__ArcStudy_ToFsWorkbook_257FC1F0;
-const FsWorksheet_fs_js_1 = require("../fable_modules/FsSpreadsheet.6.3.1/FsWorksheet.fs.js");
-const Seq_js_1 = require("@fable-org/fable-library-js/Seq.js");
-const SparseTable_js_1 = require("./Metadata/SparseTable.js");
-const Study_js_1 = require("./Metadata/Study.js");
-const ArcTypes_js_1 = require("../Core/ArcTypes.js");
-const Option_js_1 = require("@fable-org/fable-library-js/Option.js");
-const List_js_1 = require("@fable-org/fable-library-js/List.js");
-const Util_js_1 = require("@fable-org/fable-library-js/Util.js");
-const String_js_1 = require("@fable-org/fable-library-js/String.js");
-const Identifier_js_1 = require("../Core/Helper/Identifier.js");
-const FsWorkbook_fs_js_1 = require("../fable_modules/FsSpreadsheet.6.3.1/FsWorkbook.fs.js");
-const Collections_js_1 = require("../Core/Helper/Collections.js");
-const ArcTable_js_1 = require("./AnnotationTable/ArcTable.js");
-const DataMapTable_js_1 = require("./DataMapTable/DataMapTable.js");
-function ArcStudy_toMetadataSheet(study, assays) {
-    let source_1;
-    const sheet = new FsWorksheet_fs_js_1.FsWorksheet("isa_study");
-    (0, Seq_js_1.iterateIndexed)((rowI, r) => {
-        (0, SparseTable_js_1.SparseRowModule_writeToSheet)(rowI + 1, r, sheet);
-    }, (source_1 = (0, Study_js_1.toRows)(study, assays), (0, Seq_js_1.append)([(0, SparseTable_js_1.SparseRowModule_fromValues)(["STUDY"])], source_1)));
-    return sheet;
-}
-function ArcStudy_fromRows(rows) {
-    const en = (0, Util_js_1.getEnumerator)(rows);
-    en["System.Collections.IEnumerator.MoveNext"]();
-    return (0, Study_js_1.fromRows)(2, en)[3];
-}
-function ArcStudy_fromMetadataSheet(sheet) {
-    try {
-        return (0, Option_js_1.defaultArg)(ArcStudy_fromRows((0, Seq_js_1.map)(SparseTable_js_1.SparseRowModule_fromFsRow, sheet.Rows)), [ArcTypes_js_1.ArcStudy.create((0, Identifier_js_1.createMissingIdentifier)()), (0, List_js_1.empty)()]);
-    }
-    catch (err) {
-        const arg = err.message;
-        return (0, String_js_1.toFail)((0, String_js_1.printf)("Failed while parsing metadatasheet: %s"))(arg);
-    }
-}
-function ArcStudy_toMetadataCollection(study, assays) {
-    let source_1;
-    return (0, Seq_js_1.map)(SparseTable_js_1.SparseRowModule_getAllValues, (source_1 = (0, Study_js_1.toRows)(study, assays), (0, Seq_js_1.append)([(0, SparseTable_js_1.SparseRowModule_fromValues)(["STUDY"])], source_1)));
-}
-function ArcStudy_fromMetadataCollection(collection) {
-    try {
-        return (0, Option_js_1.defaultArg)(ArcStudy_fromRows((0, Seq_js_1.map)(SparseTable_js_1.SparseRowModule_fromAllValues, collection)), [ArcTypes_js_1.ArcStudy.create((0, Identifier_js_1.createMissingIdentifier)()), (0, List_js_1.empty)()]);
-    }
-    catch (err) {
-        const arg = err.message;
-        return (0, String_js_1.toFail)((0, String_js_1.printf)("Failed while parsing metadatasheet: %s"))(arg);
-    }
-}
-function ArcStudy_isMetadataSheetName(name) {
-    if (name === "isa_study") {
-        return true;
-    }
-    else {
-        return name === "Study";
-    }
-}
-function ArcStudy_isMetadataSheet(sheet) {
-    return ArcStudy_isMetadataSheetName(sheet.Name);
-}
-function ArcStudy_tryGetMetadataSheet(doc) {
-    return (0, Seq_js_1.tryFind)(ArcStudy_isMetadataSheet, doc.GetWorksheets());
-}
-/**
- * Reads an assay from a spreadsheet
- */
-function ARCtrl_ArcStudy__ArcStudy_fromFsWorkbook_Static_32154C9D(doc) {
-    try {
-        let patternInput;
-        const matchValue = ArcStudy_tryGetMetadataSheet(doc);
-        if (matchValue == null) {
-            (0, String_js_1.toConsole)((0, String_js_1.printf)("Cannot retrieve metadata: Study file does not contain \"%s\" or \"%s\" sheet."))("isa_study")("Study");
-            patternInput = [ArcTypes_js_1.ArcStudy.create((0, Identifier_js_1.createMissingIdentifier)()), (0, List_js_1.empty)()];
-        }
-        else {
-            patternInput = ArcStudy_fromMetadataSheet((0, Option_js_1.value)(matchValue));
-        }
-        const studyMetadata = patternInput[0];
-        const sheets = doc.GetWorksheets();
-        const annotationTables = (0, Collections_js_1.ResizeArray_choose)(ArcTable_js_1.tryFromFsWorksheet, sheets);
-        const datamapSheet = (0, Seq_js_1.tryPick)(DataMapTable_js_1.tryFromFsWorksheet, sheets);
-        if (!(0, Collections_js_1.ResizeArray_isEmpty)(annotationTables)) {
-            studyMetadata.Tables = annotationTables;
-        }
-        studyMetadata.DataMap = datamapSheet;
-        return [studyMetadata, patternInput[1]];
-    }
-    catch (err) {
-        const arg_2 = err.message;
-        return (0, String_js_1.toFail)((0, String_js_1.printf)("Could not parse study: \n%s"))(arg_2);
-    }
-}
-/**
- * Write a study to a spreadsheet
- *
- * If datamapSheet is true, the datamap will be written to a worksheet inside study workbook. Default: true
- */
-function ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522(study, assays, datamapSheet) {
-    const datamapSheet_1 = (0, Option_js_1.defaultArg)(datamapSheet, true);
-    const doc = new FsWorkbook_fs_js_1.FsWorkbook();
-    const metadataSheet = ArcStudy_toMetadataSheet(study, assays);
-    doc.AddWorksheet(metadataSheet);
-    if (datamapSheet_1) {
-        (0, Seq_js_1.iterate)((arg) => {
-            const sheet = (0, DataMapTable_js_1.toFsWorksheet)(arg);
-            doc.AddWorksheet(sheet);
-        }, (0, Option_js_1.toArray)(study.DataMap));
-    }
-    (0, Seq_js_1.iterateIndexed)((i, arg_1) => {
-        const sheet_1 = (0, ArcTable_js_1.toFsWorksheet)(i, arg_1);
-        doc.AddWorksheet(sheet_1);
-    }, study.Tables);
-    return doc;
-}
-function ARCtrl_ArcStudy__ArcStudy_ToFsWorkbook_257FC1F0(this$, assays, datamapSheet) {
-    return ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522(this$, (0, Option_js_1.unwrap)(assays), (0, Option_js_1.unwrap)(datamapSheet));
-}

package/dist/ts/cjs/ts/Spreadsheet/ArcWorkflow.js

@@ -1,166 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.ArcWorkflow_fromRows = ArcWorkflow_fromRows;
-exports.ArcWorkflow_toRows = ArcWorkflow_toRows;
-exports.ArcWorkflow_toMetadataSheet = ArcWorkflow_toMetadataSheet;
-exports.ArcWorkflow_fromMetadataSheet = ArcWorkflow_fromMetadataSheet;
-exports.ArcWorkflow_toMetadataCollection = ArcWorkflow_toMetadataCollection;
-exports.ArcWorkflow_fromMetadataCollection = ArcWorkflow_fromMetadataCollection;
-exports.ArcWorkflow_isMetadataSheetName = ArcWorkflow_isMetadataSheetName;
-exports.ArcWorkflow_isMetadataSheet = ArcWorkflow_isMetadataSheet;
-exports.ArcWorkflow_tryGetMetadataSheet = ArcWorkflow_tryGetMetadataSheet;
-exports.ARCtrl_ArcWorkflow__ArcWorkflow_fromFsWorkbook_Static_32154C9D = ARCtrl_ArcWorkflow__ArcWorkflow_fromFsWorkbook_Static_32154C9D;
-exports.ARCtrl_ArcWorkflow__ArcWorkflow_toFsWorkbook_Static_Z1C75CB0E = ARCtrl_ArcWorkflow__ArcWorkflow_toFsWorkbook_Static_Z1C75CB0E;
-exports.ARCtrl_ArcWorkflow__ArcWorkflow_ToFsWorkbook = ARCtrl_ArcWorkflow__ArcWorkflow_ToFsWorkbook;
-const Util_js_1 = require("@fable-org/fable-library-js/Util.js");
-const Workflow_js_1 = require("./Metadata/Workflow.js");
-const Option_js_1 = require("@fable-org/fable-library-js/Option.js");
-const List_js_1 = require("@fable-org/fable-library-js/List.js");
-const ArcTypes_js_1 = require("../Core/ArcTypes.js");
-const Contacts_js_1 = require("./Metadata/Contacts.js");
-const Identifier_js_1 = require("../Core/Helper/Identifier.js");
-const SparseTable_js_1 = require("./Metadata/SparseTable.js");
-const Seq_js_1 = require("@fable-org/fable-library-js/Seq.js");
-const FsWorksheet_fs_js_1 = require("../fable_modules/FsSpreadsheet.6.3.1/FsWorksheet.fs.js");
-const String_js_1 = require("@fable-org/fable-library-js/String.js");
-const FsWorkbook_fs_js_1 = require("../fable_modules/FsSpreadsheet.6.3.1/FsWorkbook.fs.js");
-const DataMapTable_js_1 = require("./DataMapTable/DataMapTable.js");
-function ArcWorkflow_fromRows(rows) {
-    const en = (0, Util_js_1.getEnumerator)(rows);
-    const loop = (lastRow_mut, workflow_mut, contacts_mut, rowNumber_mut) => {
-        loop: while (true) {
-            const lastRow = lastRow_mut, workflow = workflow_mut, contacts = contacts_mut, rowNumber = rowNumber_mut;
-            let matchResult, prefix_2, prefix_3;
-            if (lastRow != null) {
-                switch ((0, Option_js_1.value)(lastRow)) {
-                    case "WORKFLOW": {
-                        matchResult = 0;
-                        prefix_2 = (0, Option_js_1.value)(lastRow);
-                        break;
-                    }
-                    case "WORKFLOW CONTACTS": {
-                        matchResult = 1;
-                        prefix_3 = (0, Option_js_1.value)(lastRow);
-                        break;
-                    }
-                    default:
-                        matchResult = 2;
-                }
-            }
-            else {
-                matchResult = 2;
-            }
-            switch (matchResult) {
-                case 0: {
-                    const patternInput = (0, Workflow_js_1.fromRows)(rowNumber + 1, en);
-                    lastRow_mut = patternInput[0];
-                    workflow_mut = patternInput[3];
-                    contacts_mut = contacts;
-                    rowNumber_mut = patternInput[1];
-                    continue loop;
-                }
-                case 1: {
-                    const patternInput_1 = (0, Contacts_js_1.fromRows)("Workflow Person", rowNumber + 1, en);
-                    lastRow_mut = patternInput_1[0];
-                    workflow_mut = workflow;
-                    contacts_mut = patternInput_1[3];
-                    rowNumber_mut = patternInput_1[1];
-                    continue loop;
-                }
-                default:
-                    if (workflow != null) {
-                        const workflow_2 = (0, Option_js_1.value)(workflow);
-                        (0, ArcTypes_js_1.ArcWorkflow__set_Contacts_Z7E0D1CA3)(workflow_2, Array.from(contacts));
-                        return workflow_2;
-                    }
-                    else {
-                        return (0, ArcTypes_js_1.ArcWorkflow_create_Z3BB02240)((0, Identifier_js_1.createMissingIdentifier)(), undefined, undefined, undefined, undefined, undefined, undefined, undefined, undefined, undefined, Array.from(contacts));
-                    }
-            }
-            break;
-        }
-    };
-    if (en["System.Collections.IEnumerator.MoveNext"]()) {
-        return loop((0, SparseTable_js_1.SparseRowModule_tryGetValueAt)(0, en["System.Collections.Generic.IEnumerator`1.get_Current"]()), undefined, (0, List_js_1.empty)(), 1);
-    }
-    else {
-        throw new Error("empty workflow metadata sheet");
-    }
-}
-function ArcWorkflow_toRows(workflow) {
-    return (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)((0, Seq_js_1.singleton)((0, SparseTable_js_1.SparseRowModule_fromValues)(["WORKFLOW"])), (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)((0, Workflow_js_1.toRows)(workflow), (0, Seq_js_1.delay)(() => (0, Seq_js_1.append)((0, Seq_js_1.singleton)((0, SparseTable_js_1.SparseRowModule_fromValues)(["WORKFLOW CONTACTS"])), (0, Seq_js_1.delay)(() => (0, Contacts_js_1.toRows)("Workflow Person", (0, List_js_1.ofSeq)((0, ArcTypes_js_1.ArcWorkflow__get_Contacts)(workflow))))))))));
-}
-function ArcWorkflow_toMetadataSheet(workflow) {
-    const sheet = new FsWorksheet_fs_js_1.FsWorksheet("isa_workflow");
-    (0, Seq_js_1.iterateIndexed)((rowI, r) => {
-        (0, SparseTable_js_1.SparseRowModule_writeToSheet)(rowI + 1, r, sheet);
-    }, ArcWorkflow_toRows(workflow));
-    return sheet;
-}
-function ArcWorkflow_fromMetadataSheet(sheet) {
-    try {
-        return ArcWorkflow_fromRows((0, Seq_js_1.map)(SparseTable_js_1.SparseRowModule_fromFsRow, sheet.Rows));
-    }
-    catch (err) {
-        const arg = err.message;
-        return (0, String_js_1.toFail)((0, String_js_1.printf)("Failed while parsing metadatasheet: %s"))(arg);
-    }
-}
-function ArcWorkflow_toMetadataCollection(workflow) {
-    return (0, Seq_js_1.map)(SparseTable_js_1.SparseRowModule_getAllValues, ArcWorkflow_toRows(workflow));
-}
-function ArcWorkflow_fromMetadataCollection(collection) {
-    try {
-        return ArcWorkflow_fromRows((0, Seq_js_1.map)(SparseTable_js_1.SparseRowModule_fromAllValues, collection));
-    }
-    catch (err) {
-        const arg = err.message;
-        return (0, String_js_1.toFail)((0, String_js_1.printf)("Failed while parsing metadatasheet: %s"))(arg);
-    }
-}
-function ArcWorkflow_isMetadataSheetName(name) {
-    return name === "isa_workflow";
-}
-function ArcWorkflow_isMetadataSheet(sheet) {
-    return ArcWorkflow_isMetadataSheetName(sheet.Name);
-}
-function ArcWorkflow_tryGetMetadataSheet(doc) {
-    return (0, Seq_js_1.tryFind)(ArcWorkflow_isMetadataSheet, doc.GetWorksheets());
-}
-/**
- * Reads an workflow from a spreadsheet
- */
-function ARCtrl_ArcWorkflow__ArcWorkflow_fromFsWorkbook_Static_32154C9D(doc) {
-    try {
-        let workflowMetadata;
-        const matchValue = ArcWorkflow_tryGetMetadataSheet(doc);
-        if (matchValue == null) {
-            (0, String_js_1.toConsole)((0, String_js_1.printf)("Cannot retrieve metadata: Workflow file does not contain \"%s\" sheet."))("isa_workflow");
-            workflowMetadata = (0, ArcTypes_js_1.ArcWorkflow_create_Z3BB02240)((0, Identifier_js_1.createMissingIdentifier)());
-        }
-        else {
-            workflowMetadata = ArcWorkflow_fromMetadataSheet((0, Option_js_1.value)(matchValue));
-        }
-        (0, ArcTypes_js_1.ArcWorkflow__set_DataMap_51F1E59E)(workflowMetadata, (0, Seq_js_1.tryPick)(DataMapTable_js_1.tryFromFsWorksheet, doc.GetWorksheets()));
-        return workflowMetadata;
-    }
-    catch (err) {
-        const arg_1 = err.message;
-        return (0, String_js_1.toFail)((0, String_js_1.printf)("Could not parse assay: \n%s"))(arg_1);
-    }
-}
-/**
- * Write a workflow to a spreadsheet
- */
-function ARCtrl_ArcWorkflow__ArcWorkflow_toFsWorkbook_Static_Z1C75CB0E(workflow) {
-    const doc = new FsWorkbook_fs_js_1.FsWorkbook();
-    const metadataSheet = ArcWorkflow_toMetadataSheet(workflow);
-    doc.AddWorksheet(metadataSheet);
-    return doc;
-}
-/**
- * Write a workflow to a spreadsheet
- */
-function ARCtrl_ArcWorkflow__ArcWorkflow_ToFsWorkbook(this$) {
-    return ARCtrl_ArcWorkflow__ArcWorkflow_toFsWorkbook_Static_Z1C75CB0E(this$);
-}

package/dist/ts/cjs/ts/Spreadsheet/CollectionAux.js

@@ -1,128 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.Seq_trySkip = Seq_trySkip;
-exports.Array_ofIndexedSeq = Array_ofIndexedSeq;
-exports.Array_trySkip = Array_trySkip;
-exports.Array_tryItemDefault = Array_tryItemDefault;
-exports.Array_map4 = Array_map4;
-exports.List_tryPickDefault = List_tryPickDefault;
-exports.List_unzip4 = List_unzip4;
-exports.Dictionary_tryGetValue = Dictionary_tryGetValue;
-exports.Dictionary_tryGetString = Dictionary_tryGetString;
-const Seq_js_1 = require("@fable-org/fable-library-js/Seq.js");
-const Option_js_1 = require("@fable-org/fable-library-js/Option.js");
-const Array_js_1 = require("@fable-org/fable-library-js/Array.js");
-const Util_js_1 = require("@fable-org/fable-library-js/Util.js");
-const List_js_1 = require("@fable-org/fable-library-js/List.js");
-const MapUtil_js_1 = require("@fable-org/fable-library-js/MapUtil.js");
-const Types_js_1 = require("@fable-org/fable-library-js/Types.js");
-/**
- * If at least i values exist in seq a, builds a new array that contains the elements of the given seq, exluding the first i elements
- */
-function Seq_trySkip(i, s) {
-    try {
-        return (0, Seq_js_1.skip)(i, s);
-    }
-    catch (matchValue) {
-        return undefined;
-    }
-}
-function Array_ofIndexedSeq(s) {
-    return (0, Array_js_1.initialize)(1 + (0, Seq_js_1.maxBy)((tuple) => tuple[0], s, {
-        Compare: Util_js_1.comparePrimitives,
-    })[0], (i) => {
-        const matchValue = (0, Seq_js_1.tryFind)((arg) => (i === arg[0]), s);
-        if (matchValue == null) {
-            return "";
-        }
-        else {
-            const i_1 = (0, Option_js_1.value)(matchValue)[0] | 0;
-            return (0, Option_js_1.value)(matchValue)[1];
-        }
-    });
-}
-/**
- * If at least i values exist in array a, builds a new array that contains the elements of the given array, exluding the first i elements
- */
-function Array_trySkip(i, a) {
-    try {
-        return (0, Array_js_1.skip)(i, a);
-    }
-    catch (matchValue) {
-        return undefined;
-    }
-}
-/**
- * Returns Item of array at index i if existing, else returns default value
- */
-function Array_tryItemDefault(i, d, a) {
-    const matchValue = (0, Array_js_1.tryItem)(i, a);
-    if (matchValue == null) {
-        return d;
-    }
-    else {
-        return (0, Option_js_1.value)(matchValue);
-    }
-}
-function Array_map4(f, aa, ba, ca, da) {
-    if (!(((aa.length === ba.length) && (ba.length === ca.length)) && (ca.length === da.length))) {
-        throw new Error("");
-    }
-    return (0, Array_js_1.initialize)(aa.length, (i) => f((0, Array_js_1.item)(i, aa), (0, Array_js_1.item)(i, ba), (0, Array_js_1.item)(i, ca), (0, Array_js_1.item)(i, da)));
-}
-function List_tryPickDefault(chooser, d, list) {
-    const matchValue = (0, List_js_1.tryPick)(chooser, list);
-    if (matchValue == null) {
-        return d;
-    }
-    else {
-        return (0, Option_js_1.value)(matchValue);
-    }
-}
-function List_unzip4(l) {
-    const loop = (la_mut, lb_mut, lc_mut, ld_mut, l_1_mut) => {
-        loop: while (true) {
-            const la = la_mut, lb = lb_mut, lc = lc_mut, ld = ld_mut, l_1 = l_1_mut;
-            if ((0, List_js_1.isEmpty)(l_1)) {
-                return [(0, List_js_1.reverse)(la), (0, List_js_1.reverse)(lb), (0, List_js_1.reverse)(lc), (0, List_js_1.reverse)(ld)];
-            }
-            else {
-                la_mut = (0, List_js_1.cons)((0, List_js_1.head)(l_1)[0], la);
-                lb_mut = (0, List_js_1.cons)((0, List_js_1.head)(l_1)[1], lb);
-                lc_mut = (0, List_js_1.cons)((0, List_js_1.head)(l_1)[2], lc);
-                ld_mut = (0, List_js_1.cons)((0, List_js_1.head)(l_1)[3], ld);
-                l_1_mut = (0, List_js_1.tail)(l_1);
-                continue loop;
-            }
-            break;
-        }
-    };
-    return loop((0, List_js_1.empty)(), (0, List_js_1.empty)(), (0, List_js_1.empty)(), (0, List_js_1.empty)(), l);
-}
-function Dictionary_tryGetValue(k, dict) {
-    let patternInput;
-    let outArg = (0, Util_js_1.defaultOf)();
-    patternInput = [(0, MapUtil_js_1.tryGetValue)(dict, k, new Types_js_1.FSharpRef(() => outArg, (v) => {
-            outArg = v;
-        })), outArg];
-    if (patternInput[0]) {
-        return (0, Option_js_1.some)(patternInput[1]);
-    }
-    else {
-        return undefined;
-    }
-}
-function Dictionary_tryGetString(k, dict) {
-    let patternInput;
-    let outArg = (0, Util_js_1.defaultOf)();
-    patternInput = [(0, MapUtil_js_1.tryGetValue)(dict, k, new Types_js_1.FSharpRef(() => outArg, (v) => {
-            outArg = v;
-        })), outArg];
-    const v_1 = patternInput[1];
-    if (patternInput[0] && (v_1.trim() !== "")) {
-        return v_1.trim();
-    }
-    else {
-        return undefined;
-    }
-}

package/dist/ts/cjs/ts/Spreadsheet/DataMap.js

@@ -1,41 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.fromFsWorkbook = fromFsWorkbook;
-exports.toFsWorkbook = toFsWorkbook;
-const String_js_1 = require("@fable-org/fable-library-js/String.js");
-const Seq_js_1 = require("@fable-org/fable-library-js/Seq.js");
-const DataMapTable_js_1 = require("./DataMapTable/DataMapTable.js");
-const Option_js_1 = require("@fable-org/fable-library-js/Option.js");
-const DataMap_js_1 = require("../Core/DataMap.js");
-const FsCellsCollection_fs_js_1 = require("../fable_modules/FsSpreadsheet.6.3.1/Cells/FsCellsCollection.fs.js");
-const FsWorkbook_fs_js_1 = require("../fable_modules/FsSpreadsheet.6.3.1/FsWorkbook.fs.js");
-/**
- * Reads an datamap from a spreadsheet
- */
-function fromFsWorkbook(doc) {
-    try {
-        const worksheets = doc.GetWorksheets();
-        const dataMapTable = (0, Seq_js_1.tryPick)(DataMapTable_js_1.tryFromFsWorksheet, worksheets);
-        if (dataMapTable == null) {
-            if ((0, Seq_js_1.forAll)((sheet) => ((0, FsCellsCollection_fs_js_1.FsCellsCollection__get_Count)(sheet.CellCollection) === 0), worksheets)) {
-                return (0, DataMap_js_1.DataMap_init)();
-            }
-            else {
-                throw new Error("No DataMapTable was found in any of the sheets of the workbook");
-            }
-        }
-        else {
-            return (0, Option_js_1.value)(dataMapTable);
-        }
-    }
-    catch (err) {
-        const arg = err.message;
-        return (0, String_js_1.toFail)((0, String_js_1.printf)("Could not parse datamap: \n%s"))(arg);
-    }
-}
-function toFsWorkbook(dataMap) {
-    const doc = new FsWorkbook_fs_js_1.FsWorkbook();
-    const sheet = (0, DataMapTable_js_1.toFsWorksheet)(dataMap);
-    doc.AddWorksheet(sheet);
-    return doc;
-}