@nfdi4plants/arctrl 3.0.0-beta.2 → 3.0.0-beta.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1439) hide show
  1. package/dist/ts/__vite-browser-external-2447137e.js +4 -0
  2. package/dist/ts/__vite-browser-external-b3701507.cjs +1 -0
  3. package/dist/ts/arctrl.cjs.js +5691 -0
  4. package/dist/ts/arctrl.es.js +35562 -0
  5. package/dist/ts/arctrl.umd.js +5691 -0
  6. package/dist/ts/index.d.ts +61 -0
  7. package/dist/ts/index.d.ts.map +1 -0
  8. package/dist/ts/ts/ARC.d.ts +80 -0
  9. package/dist/ts/ts/ARC.d.ts.map +1 -0
  10. package/dist/ts/ts/Contract/ARC.d.ts +7 -0
  11. package/dist/ts/ts/Contract/ARC.d.ts.map +1 -0
  12. package/dist/ts/ts/Contract/ArcAssay.d.ts +12 -0
  13. package/dist/ts/ts/Contract/ArcAssay.d.ts.map +1 -0
  14. package/dist/ts/ts/Contract/ArcInvestigation.d.ts +10 -0
  15. package/dist/ts/ts/Contract/ArcInvestigation.d.ts.map +1 -0
  16. package/dist/ts/ts/Contract/ArcRun.d.ts +12 -0
  17. package/dist/ts/ts/Contract/ArcRun.d.ts.map +1 -0
  18. package/dist/ts/ts/Contract/ArcStudy.d.ts +13 -0
  19. package/dist/ts/ts/Contract/ArcStudy.d.ts.map +1 -0
  20. package/dist/ts/ts/Contract/ArcWorkflow.d.ts +12 -0
  21. package/dist/ts/ts/Contract/ArcWorkflow.d.ts.map +1 -0
  22. package/dist/ts/ts/Contract/Contract.d.ts +39 -0
  23. package/dist/ts/ts/Contract/Contract.d.ts.map +1 -0
  24. package/dist/ts/ts/Contract/Datamap.d.ts +29 -0
  25. package/dist/ts/ts/Contract/Datamap.d.ts.map +1 -0
  26. package/dist/ts/ts/Contract/Git.d.ts +28 -0
  27. package/dist/ts/ts/Contract/Git.d.ts.map +1 -0
  28. package/dist/ts/ts/Contract/ValidationPackagesConfig.d.ts +12 -0
  29. package/dist/ts/ts/Contract/ValidationPackagesConfig.d.ts.map +1 -0
  30. package/dist/ts/ts/ContractIO/ContractIO.d.ts +11 -0
  31. package/dist/ts/ts/ContractIO/ContractIO.d.ts.map +1 -0
  32. package/dist/ts/ts/ContractIO/FileSystemHelper.d.ts +44 -0
  33. package/dist/ts/ts/ContractIO/FileSystemHelper.d.ts.map +1 -0
  34. package/dist/ts/ts/Conversion.d.ts +292 -0
  35. package/dist/ts/ts/Conversion.d.ts.map +1 -0
  36. package/dist/ts/ts/Core/ArcTypes.d.ts +620 -0
  37. package/dist/ts/ts/Core/ArcTypes.d.ts.map +1 -0
  38. package/dist/ts/ts/Core/Comment.d.ts +35 -0
  39. package/dist/ts/ts/Core/Comment.d.ts.map +1 -0
  40. package/dist/ts/ts/Core/CommentList.d.ts +28 -0
  41. package/dist/ts/ts/Core/CommentList.d.ts.map +1 -0
  42. package/dist/ts/ts/Core/Conversion.d.ts +215 -0
  43. package/dist/ts/ts/Core/Conversion.d.ts.map +1 -0
  44. package/dist/ts/ts/Core/Data.d.ts +49 -0
  45. package/dist/ts/ts/Core/Data.d.ts.map +1 -0
  46. package/dist/ts/ts/Core/DataContext.d.ts +47 -0
  47. package/dist/ts/ts/Core/DataContext.d.ts.map +1 -0
  48. package/dist/ts/ts/Core/DataFile.d.ts +27 -0
  49. package/dist/ts/ts/Core/DataFile.d.ts.map +1 -0
  50. package/dist/ts/ts/Core/DataMap.d.ts +52 -0
  51. package/dist/ts/ts/Core/DataMap.d.ts.map +1 -0
  52. package/dist/ts/ts/Core/Helper/Collections.d.ts +61 -0
  53. package/dist/ts/ts/Core/Helper/Collections.d.ts.map +1 -0
  54. package/dist/ts/ts/Core/Helper/HashCodes.d.ts +9 -0
  55. package/dist/ts/ts/Core/Helper/HashCodes.d.ts.map +1 -0
  56. package/dist/ts/ts/Core/Helper/Identifier.d.ts +119 -0
  57. package/dist/ts/ts/Core/Helper/Identifier.d.ts.map +1 -0
  58. package/dist/ts/ts/Core/Helper/ORCID.d.ts +7 -0
  59. package/dist/ts/ts/Core/Helper/ORCID.d.ts.map +1 -0
  60. package/dist/ts/ts/Core/Helper/Regex.d.ts +194 -0
  61. package/dist/ts/ts/Core/Helper/Regex.d.ts.map +1 -0
  62. package/dist/ts/ts/Core/Helper/SemVer.d.ts +20 -0
  63. package/dist/ts/ts/Core/Helper/SemVer.d.ts.map +1 -0
  64. package/dist/ts/ts/Core/Helper/Url.d.ts +10 -0
  65. package/dist/ts/ts/Core/Helper/Url.d.ts.map +1 -0
  66. package/dist/ts/ts/Core/IdentifierSetters.d.ts +7 -0
  67. package/dist/ts/ts/Core/IdentifierSetters.d.ts.map +1 -0
  68. package/dist/ts/ts/Core/OntologyAnnotation.d.ts +57 -0
  69. package/dist/ts/ts/Core/OntologyAnnotation.d.ts.map +1 -0
  70. package/dist/ts/ts/Core/OntologySourceReference.d.ts +31 -0
  71. package/dist/ts/ts/Core/OntologySourceReference.d.ts.map +1 -0
  72. package/dist/ts/ts/Core/Person.d.ts +56 -0
  73. package/dist/ts/ts/Core/Person.d.ts.map +1 -0
  74. package/dist/ts/ts/Core/Process/ColumnIndex.d.ts +79 -0
  75. package/dist/ts/ts/Core/Process/ColumnIndex.d.ts.map +1 -0
  76. package/dist/ts/ts/Core/Process/Component.d.ts +65 -0
  77. package/dist/ts/ts/Core/Process/Component.d.ts.map +1 -0
  78. package/dist/ts/ts/Core/Process/Factor.d.ts +44 -0
  79. package/dist/ts/ts/Core/Process/Factor.d.ts.map +1 -0
  80. package/dist/ts/ts/Core/Process/FactorValue.d.ts +44 -0
  81. package/dist/ts/ts/Core/Process/FactorValue.d.ts.map +1 -0
  82. package/dist/ts/ts/Core/Process/Material.d.ts +27 -0
  83. package/dist/ts/ts/Core/Process/Material.d.ts.map +1 -0
  84. package/dist/ts/ts/Core/Process/MaterialAttribute.d.ts +53 -0
  85. package/dist/ts/ts/Core/Process/MaterialAttribute.d.ts.map +1 -0
  86. package/dist/ts/ts/Core/Process/MaterialAttributeValue.d.ts +55 -0
  87. package/dist/ts/ts/Core/Process/MaterialAttributeValue.d.ts.map +1 -0
  88. package/dist/ts/ts/Core/Process/MaterialType.d.ts +22 -0
  89. package/dist/ts/ts/Core/Process/MaterialType.d.ts.map +1 -0
  90. package/dist/ts/ts/Core/Process/Process.d.ts +113 -0
  91. package/dist/ts/ts/Core/Process/Process.d.ts.map +1 -0
  92. package/dist/ts/ts/Core/Process/ProcessInput.d.ts +117 -0
  93. package/dist/ts/ts/Core/Process/ProcessInput.d.ts.map +1 -0
  94. package/dist/ts/ts/Core/Process/ProcessOutput.d.ts +106 -0
  95. package/dist/ts/ts/Core/Process/ProcessOutput.d.ts.map +1 -0
  96. package/dist/ts/ts/Core/Process/ProcessParameterValue.d.ts +40 -0
  97. package/dist/ts/ts/Core/Process/ProcessParameterValue.d.ts.map +1 -0
  98. package/dist/ts/ts/Core/Process/ProcessSequence.d.ts +89 -0
  99. package/dist/ts/ts/Core/Process/ProcessSequence.d.ts.map +1 -0
  100. package/dist/ts/ts/Core/Process/Protocol.d.ts +141 -0
  101. package/dist/ts/ts/Core/Process/Protocol.d.ts.map +1 -0
  102. package/dist/ts/ts/Core/Process/ProtocolParameter.d.ts +32 -0
  103. package/dist/ts/ts/Core/Process/ProtocolParameter.d.ts.map +1 -0
  104. package/dist/ts/ts/Core/Process/Sample.d.ts +31 -0
  105. package/dist/ts/ts/Core/Process/Sample.d.ts.map +1 -0
  106. package/dist/ts/ts/Core/Process/Source.d.ts +24 -0
  107. package/dist/ts/ts/Core/Process/Source.d.ts.map +1 -0
  108. package/dist/ts/ts/Core/Publication.d.ts +36 -0
  109. package/dist/ts/ts/Core/Publication.d.ts.map +1 -0
  110. package/dist/ts/ts/Core/Table/ArcTable.d.ts +137 -0
  111. package/dist/ts/ts/Core/Table/ArcTable.d.ts.map +1 -0
  112. package/dist/ts/ts/Core/Table/ArcTableAux.d.ts +154 -0
  113. package/dist/ts/ts/Core/Table/ArcTableAux.d.ts.map +1 -0
  114. package/dist/ts/ts/Core/Table/ArcTables.d.ts +91 -0
  115. package/dist/ts/ts/Core/Table/ArcTables.d.ts.map +1 -0
  116. package/dist/ts/ts/Core/Table/CompositeCell.d.ts +58 -0
  117. package/dist/ts/ts/Core/Table/CompositeCell.d.ts.map +1 -0
  118. package/dist/ts/ts/Core/Table/CompositeColumn.d.ts +19 -0
  119. package/dist/ts/ts/Core/Table/CompositeColumn.d.ts.map +1 -0
  120. package/dist/ts/ts/Core/Table/CompositeHeader.d.ts +130 -0
  121. package/dist/ts/ts/Core/Table/CompositeHeader.d.ts.map +1 -0
  122. package/dist/ts/ts/Core/Template.d.ts +69 -0
  123. package/dist/ts/ts/Core/Template.d.ts.map +1 -0
  124. package/dist/ts/ts/Core/Templates.d.ts +18 -0
  125. package/dist/ts/ts/Core/Templates.d.ts.map +1 -0
  126. package/dist/ts/ts/Core/URI.d.ts.map +1 -0
  127. package/dist/ts/ts/Core/Value.d.ts +41 -0
  128. package/dist/ts/ts/Core/Value.d.ts.map +1 -0
  129. package/dist/ts/ts/CrossAsync.d.ts +9 -0
  130. package/dist/ts/ts/CrossAsync.d.ts.map +1 -0
  131. package/dist/ts/ts/FileSystem/Commit.d.ts +13 -0
  132. package/dist/ts/ts/FileSystem/Commit.d.ts.map +1 -0
  133. package/dist/ts/ts/FileSystem/DefaultGitattributes.d.ts.map +1 -0
  134. package/dist/ts/ts/FileSystem/DefaultGitignore.d.ts.map +1 -0
  135. package/dist/ts/ts/FileSystem/FileSystem.d.ts +21 -0
  136. package/dist/ts/ts/FileSystem/FileSystem.d.ts.map +1 -0
  137. package/dist/ts/ts/FileSystem/FileSystemTree.d.ts +55 -0
  138. package/dist/ts/ts/FileSystem/FileSystemTree.d.ts.map +1 -0
  139. package/dist/ts/ts/FileSystem/Path.d.ts.map +1 -0
  140. package/dist/ts/ts/Json/Assay.d.ts +19 -0
  141. package/dist/ts/ts/Json/Assay.d.ts.map +1 -0
  142. package/dist/ts/ts/Json/Comment.d.ts +14 -0
  143. package/dist/ts/ts/Json/Comment.d.ts.map +1 -0
  144. package/dist/ts/ts/Json/Data.d.ts +17 -0
  145. package/dist/ts/ts/Json/Data.d.ts.map +1 -0
  146. package/dist/ts/ts/Json/DataFile.d.ts +7 -0
  147. package/dist/ts/ts/Json/DataFile.d.ts.map +1 -0
  148. package/dist/ts/ts/Json/DataMap/DataContext.d.ts +5 -0
  149. package/dist/ts/ts/Json/DataMap/DataContext.d.ts.map +1 -0
  150. package/dist/ts/ts/Json/DataMap/DataMap.d.ts +11 -0
  151. package/dist/ts/ts/Json/DataMap/DataMap.d.ts.map +1 -0
  152. package/dist/ts/ts/Json/Decode.d.ts +18 -0
  153. package/dist/ts/ts/Json/Decode.d.ts.map +1 -0
  154. package/dist/ts/ts/Json/Encode.d.ts +23 -0
  155. package/dist/ts/ts/Json/Encode.d.ts.map +1 -0
  156. package/dist/ts/ts/Json/IDTable.d.ts +5 -0
  157. package/dist/ts/ts/Json/IDTable.d.ts.map +1 -0
  158. package/dist/ts/ts/Json/Investigation.d.ts +20 -0
  159. package/dist/ts/ts/Json/Investigation.d.ts.map +1 -0
  160. package/dist/ts/ts/Json/OntologyAnnotation.d.ts +18 -0
  161. package/dist/ts/ts/Json/OntologyAnnotation.d.ts.map +1 -0
  162. package/dist/ts/ts/Json/OntologySourceReference.d.ts +12 -0
  163. package/dist/ts/ts/Json/OntologySourceReference.d.ts.map +1 -0
  164. package/dist/ts/ts/Json/Person.d.ts +22 -0
  165. package/dist/ts/ts/Json/Person.d.ts.map +1 -0
  166. package/dist/ts/ts/Json/Process/AssayMaterials.d.ts +7 -0
  167. package/dist/ts/ts/Json/Process/AssayMaterials.d.ts.map +1 -0
  168. package/dist/ts/ts/Json/Process/Component.d.ts +11 -0
  169. package/dist/ts/ts/Json/Process/Component.d.ts.map +1 -0
  170. package/dist/ts/ts/Json/Process/Factor.d.ts +8 -0
  171. package/dist/ts/ts/Json/Process/Factor.d.ts.map +1 -0
  172. package/dist/ts/ts/Json/Process/FactorValue.d.ts +11 -0
  173. package/dist/ts/ts/Json/Process/FactorValue.d.ts.map +1 -0
  174. package/dist/ts/ts/Json/Process/Material.d.ts +12 -0
  175. package/dist/ts/ts/Json/Process/Material.d.ts.map +1 -0
  176. package/dist/ts/ts/Json/Process/MaterialAttribute.d.ts +8 -0
  177. package/dist/ts/ts/Json/Process/MaterialAttribute.d.ts.map +1 -0
  178. package/dist/ts/ts/Json/Process/MaterialAttributeValue.d.ts +11 -0
  179. package/dist/ts/ts/Json/Process/MaterialAttributeValue.d.ts.map +1 -0
  180. package/dist/ts/ts/Json/Process/MaterialType.d.ts +7 -0
  181. package/dist/ts/ts/Json/Process/MaterialType.d.ts.map +1 -0
  182. package/dist/ts/ts/Json/Process/Process.d.ts +10 -0
  183. package/dist/ts/ts/Json/Process/Process.d.ts.map +1 -0
  184. package/dist/ts/ts/Json/Process/ProcessInput.d.ts +9 -0
  185. package/dist/ts/ts/Json/Process/ProcessInput.d.ts.map +1 -0
  186. package/dist/ts/ts/Json/Process/ProcessOutput.d.ts +9 -0
  187. package/dist/ts/ts/Json/Process/ProcessOutput.d.ts.map +1 -0
  188. package/dist/ts/ts/Json/Process/ProcessParameterValue.d.ts +11 -0
  189. package/dist/ts/ts/Json/Process/ProcessParameterValue.d.ts.map +1 -0
  190. package/dist/ts/ts/Json/Process/Protocol.d.ts +10 -0
  191. package/dist/ts/ts/Json/Process/Protocol.d.ts.map +1 -0
  192. package/dist/ts/ts/Json/Process/ProtocolParameter.d.ts +8 -0
  193. package/dist/ts/ts/Json/Process/ProtocolParameter.d.ts.map +1 -0
  194. package/dist/ts/ts/Json/Process/Sample.d.ts +15 -0
  195. package/dist/ts/ts/Json/Process/Sample.d.ts.map +1 -0
  196. package/dist/ts/ts/Json/Process/Source.d.ts +12 -0
  197. package/dist/ts/ts/Json/Process/Source.d.ts.map +1 -0
  198. package/dist/ts/ts/Json/Process/StudyMaterials.d.ts +7 -0
  199. package/dist/ts/ts/Json/Process/StudyMaterials.d.ts.map +1 -0
  200. package/dist/ts/ts/Json/Process/Value.d.ts +7 -0
  201. package/dist/ts/ts/Json/Process/Value.d.ts.map +1 -0
  202. package/dist/ts/ts/Json/PropertyValue.d.ts +9 -0
  203. package/dist/ts/ts/Json/PropertyValue.d.ts.map +1 -0
  204. package/dist/ts/ts/Json/Publication.d.ts +14 -0
  205. package/dist/ts/ts/Json/Publication.d.ts.map +1 -0
  206. package/dist/ts/ts/Json/ROCrate/LDContext.d.ts +5 -0
  207. package/dist/ts/ts/Json/ROCrate/LDContext.d.ts.map +1 -0
  208. package/dist/ts/ts/Json/ROCrate/LDGraph.d.ts +5 -0
  209. package/dist/ts/ts/Json/ROCrate/LDGraph.d.ts.map +1 -0
  210. package/dist/ts/ts/Json/ROCrate/LDNode.d.ts +13 -0
  211. package/dist/ts/ts/Json/ROCrate/LDNode.d.ts.map +1 -0
  212. package/dist/ts/ts/Json/ROCrate/LDRef.d.ts +5 -0
  213. package/dist/ts/ts/Json/ROCrate/LDRef.d.ts.map +1 -0
  214. package/dist/ts/ts/Json/ROCrate/LDValue.d.ts +7 -0
  215. package/dist/ts/ts/Json/ROCrate/LDValue.d.ts.map +1 -0
  216. package/dist/ts/ts/Json/StringTable.d.ts +9 -0
  217. package/dist/ts/ts/Json/StringTable.d.ts.map +1 -0
  218. package/dist/ts/ts/Json/Study.d.ts +26 -0
  219. package/dist/ts/ts/Json/Study.d.ts.map +1 -0
  220. package/dist/ts/ts/Json/Table/ArcTable.d.ts +15 -0
  221. package/dist/ts/ts/Json/Table/ArcTable.d.ts.map +1 -0
  222. package/dist/ts/ts/Json/Table/CellTable.d.ts +11 -0
  223. package/dist/ts/ts/Json/Table/CellTable.d.ts.map +1 -0
  224. package/dist/ts/ts/Json/Table/CompositeCell.d.ts +10 -0
  225. package/dist/ts/ts/Json/Table/CompositeCell.d.ts.map +1 -0
  226. package/dist/ts/ts/Json/Table/CompositeHeader.d.ts +5 -0
  227. package/dist/ts/ts/Json/Table/CompositeHeader.d.ts.map +1 -0
  228. package/dist/ts/ts/Json/Table/IOType.d.ts +5 -0
  229. package/dist/ts/ts/Json/Table/IOType.d.ts.map +1 -0
  230. package/dist/ts/ts/Json/Table/OATable.d.ts +10 -0
  231. package/dist/ts/ts/Json/Table/OATable.d.ts.map +1 -0
  232. package/dist/ts/ts/Json/Table/Templates.d.ts +15 -0
  233. package/dist/ts/ts/Json/Table/Templates.d.ts.map +1 -0
  234. package/dist/ts/ts/Json/context/rocrate/isa_assay_context.d.ts +26 -0
  235. package/dist/ts/ts/Json/context/rocrate/isa_assay_context.d.ts.map +1 -0
  236. package/dist/ts/ts/Json/context/rocrate/isa_comment_context.d.ts +16 -0
  237. package/dist/ts/ts/Json/context/rocrate/isa_comment_context.d.ts.map +1 -0
  238. package/dist/ts/ts/Json/context/rocrate/isa_data_context.d.ts +18 -0
  239. package/dist/ts/ts/Json/context/rocrate/isa_data_context.d.ts.map +1 -0
  240. package/dist/ts/ts/Json/context/rocrate/isa_investigation_context.d.ts +26 -0
  241. package/dist/ts/ts/Json/context/rocrate/isa_investigation_context.d.ts.map +1 -0
  242. package/dist/ts/ts/Json/context/rocrate/isa_material_context.d.ts +19 -0
  243. package/dist/ts/ts/Json/context/rocrate/isa_material_context.d.ts.map +1 -0
  244. package/dist/ts/ts/Json/context/rocrate/isa_ontology_annotation_context.d.ts +17 -0
  245. package/dist/ts/ts/Json/context/rocrate/isa_ontology_annotation_context.d.ts.map +1 -0
  246. package/dist/ts/ts/Json/context/rocrate/isa_ontology_source_reference_context.d.ts +19 -0
  247. package/dist/ts/ts/Json/context/rocrate/isa_ontology_source_reference_context.d.ts.map +1 -0
  248. package/dist/ts/ts/Json/context/rocrate/isa_organization_context.d.ts +15 -0
  249. package/dist/ts/ts/Json/context/rocrate/isa_organization_context.d.ts.map +1 -0
  250. package/dist/ts/ts/Json/context/rocrate/isa_person_context.d.ts +25 -0
  251. package/dist/ts/ts/Json/context/rocrate/isa_person_context.d.ts.map +1 -0
  252. package/dist/ts/ts/Json/context/rocrate/isa_process_context.d.ts +23 -0
  253. package/dist/ts/ts/Json/context/rocrate/isa_process_context.d.ts.map +1 -0
  254. package/dist/ts/ts/Json/context/rocrate/isa_protocol_context.d.ts +22 -0
  255. package/dist/ts/ts/Json/context/rocrate/isa_protocol_context.d.ts.map +1 -0
  256. package/dist/ts/ts/Json/context/rocrate/isa_publication_context.d.ts +19 -0
  257. package/dist/ts/ts/Json/context/rocrate/isa_publication_context.d.ts.map +1 -0
  258. package/dist/ts/ts/Json/context/rocrate/isa_sample_context.d.ts +18 -0
  259. package/dist/ts/ts/Json/context/rocrate/isa_sample_context.d.ts.map +1 -0
  260. package/dist/ts/ts/Json/context/rocrate/isa_source_context.d.ts +18 -0
  261. package/dist/ts/ts/Json/context/rocrate/isa_source_context.d.ts.map +1 -0
  262. package/dist/ts/ts/Json/context/rocrate/isa_study_context.d.ts +34 -0
  263. package/dist/ts/ts/Json/context/rocrate/isa_study_context.d.ts.map +1 -0
  264. package/dist/ts/ts/Json/context/rocrate/property_value_context.d.ts +3 -0
  265. package/dist/ts/ts/Json/context/rocrate/property_value_context.d.ts.map +1 -0
  266. package/dist/ts/ts/Json/context/rocrate/rocrate_context.d.ts +16 -0
  267. package/dist/ts/ts/Json/context/rocrate/rocrate_context.d.ts.map +1 -0
  268. package/dist/ts/ts/Json.d.ts +90 -0
  269. package/dist/ts/ts/Json.d.ts.map +1 -0
  270. package/dist/ts/ts/JsonIO/Assay.d.ts +19 -0
  271. package/dist/ts/ts/JsonIO/Assay.d.ts.map +1 -0
  272. package/dist/ts/ts/JsonIO/Investigation.d.ts +19 -0
  273. package/dist/ts/ts/JsonIO/Investigation.d.ts.map +1 -0
  274. package/dist/ts/ts/JsonIO/LDObject.d.ts +29 -0
  275. package/dist/ts/ts/JsonIO/LDObject.d.ts.map +1 -0
  276. package/dist/ts/ts/JsonIO/OntologyAnnotation.d.ts +16 -0
  277. package/dist/ts/ts/JsonIO/OntologyAnnotation.d.ts.map +1 -0
  278. package/dist/ts/ts/JsonIO/Study.d.ts +20 -0
  279. package/dist/ts/ts/JsonIO/Study.d.ts.map +1 -0
  280. package/dist/ts/ts/JsonIO/Table/Compression.d.ts +8 -0
  281. package/dist/ts/ts/JsonIO/Table/Compression.d.ts.map +1 -0
  282. package/dist/ts/ts/JsonIO/Table/Templates.d.ts +15 -0
  283. package/dist/ts/ts/JsonIO/Table/Templates.d.ts.map +1 -0
  284. package/dist/ts/ts/ROCrate/Generic/Comment.d.ts +21 -0
  285. package/dist/ts/ts/ROCrate/Generic/Comment.d.ts.map +1 -0
  286. package/dist/ts/ts/ROCrate/Generic/Dataset.d.ts +92 -0
  287. package/dist/ts/ts/ROCrate/Generic/Dataset.d.ts.map +1 -0
  288. package/dist/ts/ts/ROCrate/Generic/DefinedTerm.d.ts +21 -0
  289. package/dist/ts/ts/ROCrate/Generic/DefinedTerm.d.ts.map +1 -0
  290. package/dist/ts/ts/ROCrate/Generic/File.d.ts +35 -0
  291. package/dist/ts/ts/ROCrate/Generic/File.d.ts.map +1 -0
  292. package/dist/ts/ts/ROCrate/Generic/LabProcess.d.ts +43 -0
  293. package/dist/ts/ts/ROCrate/Generic/LabProcess.d.ts.map +1 -0
  294. package/dist/ts/ts/ROCrate/Generic/LabProtocol.d.ts +44 -0
  295. package/dist/ts/ts/ROCrate/Generic/LabProtocol.d.ts.map +1 -0
  296. package/dist/ts/ts/ROCrate/Generic/Organization.d.ts +17 -0
  297. package/dist/ts/ts/ROCrate/Generic/Organization.d.ts.map +1 -0
  298. package/dist/ts/ts/ROCrate/Generic/Person.d.ts +51 -0
  299. package/dist/ts/ts/ROCrate/Generic/Person.d.ts.map +1 -0
  300. package/dist/ts/ts/ROCrate/Generic/PostalAddress.d.ts +25 -0
  301. package/dist/ts/ts/ROCrate/Generic/PostalAddress.d.ts.map +1 -0
  302. package/dist/ts/ts/ROCrate/Generic/PropertyValue.d.ts +73 -0
  303. package/dist/ts/ts/ROCrate/Generic/PropertyValue.d.ts.map +1 -0
  304. package/dist/ts/ts/ROCrate/Generic/Sample.d.ts +30 -0
  305. package/dist/ts/ts/ROCrate/Generic/Sample.d.ts.map +1 -0
  306. package/dist/ts/ts/ROCrate/Generic/ScholarlyArticle.d.ts +34 -0
  307. package/dist/ts/ts/ROCrate/Generic/ScholarlyArticle.d.ts.map +1 -0
  308. package/dist/ts/ts/ROCrate/Helper.d.ts.map +1 -0
  309. package/dist/ts/ts/ROCrate/LDContext.d.ts +43 -0
  310. package/dist/ts/ts/ROCrate/LDContext.d.ts.map +1 -0
  311. package/dist/ts/ts/ROCrate/LDObject.d.ts +97 -0
  312. package/dist/ts/ts/ROCrate/LDObject.d.ts.map +1 -0
  313. package/dist/ts/ts/ROCrate/ROCrateContext.d.ts +7 -0
  314. package/dist/ts/ts/ROCrate/ROCrateContext.d.ts.map +1 -0
  315. package/dist/ts/ts/ROCrateIO.d.ts +16 -0
  316. package/dist/ts/ts/ROCrateIO.d.ts.map +1 -0
  317. package/dist/ts/ts/Spreadsheet/AnnotationTable/ArcTable.d.ts +40 -0
  318. package/dist/ts/ts/Spreadsheet/AnnotationTable/ArcTable.d.ts.map +1 -0
  319. package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeCell.d.ts +9 -0
  320. package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeCell.d.ts.map +1 -0
  321. package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeColumn.d.ts +24 -0
  322. package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeColumn.d.ts.map +1 -0
  323. package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeHeader.d.ts +22 -0
  324. package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeHeader.d.ts.map +1 -0
  325. package/dist/ts/ts/Spreadsheet/ArcAssay.d.ts +31 -0
  326. package/dist/ts/ts/Spreadsheet/ArcAssay.d.ts.map +1 -0
  327. package/dist/ts/ts/Spreadsheet/ArcInvestigation.d.ts +42 -0
  328. package/dist/ts/ts/Spreadsheet/ArcInvestigation.d.ts.map +1 -0
  329. package/dist/ts/ts/Spreadsheet/ArcRun.d.ts +27 -0
  330. package/dist/ts/ts/Spreadsheet/ArcRun.d.ts.map +1 -0
  331. package/dist/ts/ts/Spreadsheet/ArcStudy.d.ts +26 -0
  332. package/dist/ts/ts/Spreadsheet/ArcStudy.d.ts.map +1 -0
  333. package/dist/ts/ts/Spreadsheet/ArcWorkflow.d.ts +27 -0
  334. package/dist/ts/ts/Spreadsheet/ArcWorkflow.d.ts.map +1 -0
  335. package/dist/ts/ts/Spreadsheet/CollectionAux.d.ts +23 -0
  336. package/dist/ts/ts/Spreadsheet/CollectionAux.d.ts.map +1 -0
  337. package/dist/ts/ts/Spreadsheet/DataMap.d.ts +8 -0
  338. package/dist/ts/ts/Spreadsheet/DataMap.d.ts.map +1 -0
  339. package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapColumn.d.ts +7 -0
  340. package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapColumn.d.ts.map +1 -0
  341. package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapHeader.d.ts +23 -0
  342. package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapHeader.d.ts.map +1 -0
  343. package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapTable.d.ts +23 -0
  344. package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapTable.d.ts.map +1 -0
  345. package/dist/ts/ts/Spreadsheet/Metadata/Assays.d.ts +14 -0
  346. package/dist/ts/ts/Spreadsheet/Metadata/Assays.d.ts.map +1 -0
  347. package/dist/ts/ts/Spreadsheet/Metadata/Comment.d.ts +14 -0
  348. package/dist/ts/ts/Spreadsheet/Metadata/Comment.d.ts.map +1 -0
  349. package/dist/ts/ts/Spreadsheet/Metadata/Contacts.d.ts +25 -0
  350. package/dist/ts/ts/Spreadsheet/Metadata/Contacts.d.ts.map +1 -0
  351. package/dist/ts/ts/Spreadsheet/Metadata/Conversions.d.ts +60 -0
  352. package/dist/ts/ts/Spreadsheet/Metadata/Conversions.d.ts.map +1 -0
  353. package/dist/ts/ts/Spreadsheet/Metadata/DesignDescriptors.d.ts +16 -0
  354. package/dist/ts/ts/Spreadsheet/Metadata/DesignDescriptors.d.ts.map +1 -0
  355. package/dist/ts/ts/Spreadsheet/Metadata/Factors.d.ts +18 -0
  356. package/dist/ts/ts/Spreadsheet/Metadata/Factors.d.ts.map +1 -0
  357. package/dist/ts/ts/Spreadsheet/Metadata/OntologyAnnotation.d.ts +12 -0
  358. package/dist/ts/ts/Spreadsheet/Metadata/OntologyAnnotation.d.ts.map +1 -0
  359. package/dist/ts/ts/Spreadsheet/Metadata/OntologySourceReference.d.ts +18 -0
  360. package/dist/ts/ts/Spreadsheet/Metadata/OntologySourceReference.d.ts.map +1 -0
  361. package/dist/ts/ts/Spreadsheet/Metadata/Protocols.d.ts +28 -0
  362. package/dist/ts/ts/Spreadsheet/Metadata/Protocols.d.ts.map +1 -0
  363. package/dist/ts/ts/Spreadsheet/Metadata/Publication.d.ts +21 -0
  364. package/dist/ts/ts/Spreadsheet/Metadata/Publication.d.ts.map +1 -0
  365. package/dist/ts/ts/Spreadsheet/Metadata/Run.d.ts +14 -0
  366. package/dist/ts/ts/Spreadsheet/Metadata/Run.d.ts.map +1 -0
  367. package/dist/ts/ts/Spreadsheet/Metadata/SparseTable.d.ts +37 -0
  368. package/dist/ts/ts/Spreadsheet/Metadata/SparseTable.d.ts.map +1 -0
  369. package/dist/ts/ts/Spreadsheet/Metadata/Study.d.ts +38 -0
  370. package/dist/ts/ts/Spreadsheet/Metadata/Study.d.ts.map +1 -0
  371. package/dist/ts/ts/Spreadsheet/Metadata/Workflow.d.ts +31 -0
  372. package/dist/ts/ts/Spreadsheet/Metadata/Workflow.d.ts.map +1 -0
  373. package/dist/ts/ts/Template.Web.d.ts +11 -0
  374. package/dist/ts/ts/Template.Web.d.ts.map +1 -0
  375. package/dist/ts/ts/ValidationPackages/ValidationPackage.d.ts +21 -0
  376. package/dist/ts/ts/ValidationPackages/ValidationPackage.d.ts.map +1 -0
  377. package/dist/ts/ts/ValidationPackages/ValidationPackagesConfig.d.ts +23 -0
  378. package/dist/ts/ts/ValidationPackages/ValidationPackagesConfig.d.ts.map +1 -0
  379. package/dist/ts/ts/WebRequest/WebRequest.Node.d.ts +4 -0
  380. package/dist/ts/ts/WebRequest/WebRequest.Node.d.ts.map +1 -0
  381. package/dist/ts/ts/WebRequest/WebRequest.d.ts +3 -0
  382. package/dist/ts/ts/WebRequest/WebRequest.d.ts.map +1 -0
  383. package/dist/ts/ts/Xlsx.d.ts +50 -0
  384. package/dist/ts/ts/Xlsx.d.ts.map +1 -0
  385. package/dist/ts/ts/Yaml/Encode.d.ts +5 -0
  386. package/dist/ts/ts/Yaml/Encode.d.ts.map +1 -0
  387. package/dist/ts/ts/Yaml/ValidationPackage.d.ts +10 -0
  388. package/dist/ts/ts/Yaml/ValidationPackage.d.ts.map +1 -0
  389. package/dist/ts/ts/Yaml/ValidationPackagesConfig.d.ts +10 -0
  390. package/dist/ts/ts/Yaml/ValidationPackagesConfig.d.ts.map +1 -0
  391. package/package.json +13 -10
  392. package/dist/ts/cjs/index.js +0 -85
  393. package/dist/ts/cjs/ts/ARC.js +0 -976
  394. package/dist/ts/cjs/ts/Contract/ARC.js +0 -61
  395. package/dist/ts/cjs/ts/Contract/ArcAssay.js +0 -103
  396. package/dist/ts/cjs/ts/Contract/ArcInvestigation.js +0 -77
  397. package/dist/ts/cjs/ts/Contract/ArcRun.js +0 -103
  398. package/dist/ts/cjs/ts/Contract/ArcStudy.js +0 -103
  399. package/dist/ts/cjs/ts/Contract/ArcWorkflow.js +0 -104
  400. package/dist/ts/cjs/ts/Contract/Contract.js +0 -100
  401. package/dist/ts/cjs/ts/Contract/Datamap.js +0 -314
  402. package/dist/ts/cjs/ts/Contract/Git.js +0 -94
  403. package/dist/ts/cjs/ts/Contract/ValidationPackagesConfig.js +0 -97
  404. package/dist/ts/cjs/ts/ContractIO/ContractIO.js +0 -217
  405. package/dist/ts/cjs/ts/ContractIO/FileSystemHelper.js +0 -205
  406. package/dist/ts/cjs/ts/Conversion.js +0 -1774
  407. package/dist/ts/cjs/ts/Core/ArcTypes.js +0 -3803
  408. package/dist/ts/cjs/ts/Core/Comment.js +0 -106
  409. package/dist/ts/cjs/ts/Core/CommentList.js +0 -134
  410. package/dist/ts/cjs/ts/Core/Conversion.js +0 -1198
  411. package/dist/ts/cjs/ts/Core/Data.js +0 -196
  412. package/dist/ts/cjs/ts/Core/DataContext.js +0 -141
  413. package/dist/ts/cjs/ts/Core/DataFile.js +0 -98
  414. package/dist/ts/cjs/ts/Core/DataMap.js +0 -185
  415. package/dist/ts/cjs/ts/Core/Helper/Collections.js +0 -502
  416. package/dist/ts/cjs/ts/Core/Helper/HashCodes.js +0 -40
  417. package/dist/ts/cjs/ts/Core/Helper/Identifier.js +0 -329
  418. package/dist/ts/cjs/ts/Core/Helper/ORCID.js +0 -40
  419. package/dist/ts/cjs/ts/Core/Helper/Printer.js +0 -2
  420. package/dist/ts/cjs/ts/Core/Helper/Regex.js +0 -616
  421. package/dist/ts/cjs/ts/Core/Helper/SemVer.js +0 -59
  422. package/dist/ts/cjs/ts/Core/Helper/Url.js +0 -40
  423. package/dist/ts/cjs/ts/Core/IPropertyValue.js +0 -2
  424. package/dist/ts/cjs/ts/Core/IdentifierSetters.js +0 -27
  425. package/dist/ts/cjs/ts/Core/OntologyAnnotation.js +0 -219
  426. package/dist/ts/cjs/ts/Core/OntologySourceReference.js +0 -94
  427. package/dist/ts/cjs/ts/Core/Person.js +0 -196
  428. package/dist/ts/cjs/ts/Core/Process/ColumnIndex.js +0 -258
  429. package/dist/ts/cjs/ts/Core/Process/Component.js +0 -200
  430. package/dist/ts/cjs/ts/Core/Process/Factor.js +0 -111
  431. package/dist/ts/cjs/ts/Core/Process/FactorValue.js +0 -143
  432. package/dist/ts/cjs/ts/Core/Process/Material.js +0 -68
  433. package/dist/ts/cjs/ts/Core/Process/MaterialAttribute.js +0 -103
  434. package/dist/ts/cjs/ts/Core/Process/MaterialAttributeValue.js +0 -160
  435. package/dist/ts/cjs/ts/Core/Process/MaterialType.js +0 -51
  436. package/dist/ts/cjs/ts/Core/Process/Process.js +0 -371
  437. package/dist/ts/cjs/ts/Core/Process/ProcessInput.js +0 -321
  438. package/dist/ts/cjs/ts/Core/Process/ProcessOutput.js +0 -282
  439. package/dist/ts/cjs/ts/Core/Process/ProcessParameterValue.js +0 -141
  440. package/dist/ts/cjs/ts/Core/Process/ProcessSequence.js +0 -250
  441. package/dist/ts/cjs/ts/Core/Process/Protocol.js +0 -248
  442. package/dist/ts/cjs/ts/Core/Process/ProtocolParameter.js +0 -75
  443. package/dist/ts/cjs/ts/Core/Process/Sample.js +0 -73
  444. package/dist/ts/cjs/ts/Core/Process/Source.js +0 -56
  445. package/dist/ts/cjs/ts/Core/Publication.js +0 -118
  446. package/dist/ts/cjs/ts/Core/Table/ArcTable.js +0 -923
  447. package/dist/ts/cjs/ts/Core/Table/ArcTableAux.js +0 -1262
  448. package/dist/ts/cjs/ts/Core/Table/ArcTables.js +0 -476
  449. package/dist/ts/cjs/ts/Core/Table/CompositeCell.js +0 -317
  450. package/dist/ts/cjs/ts/Core/Table/CompositeColumn.js +0 -60
  451. package/dist/ts/cjs/ts/Core/Table/CompositeHeader.js +0 -718
  452. package/dist/ts/cjs/ts/Core/Template.js +0 -196
  453. package/dist/ts/cjs/ts/Core/Templates.js +0 -86
  454. package/dist/ts/cjs/ts/Core/URI.js +0 -20
  455. package/dist/ts/cjs/ts/Core/Value.js +0 -191
  456. package/dist/ts/cjs/ts/CrossAsync.js +0 -35
  457. package/dist/ts/cjs/ts/FileSystem/Commit.js +0 -20
  458. package/dist/ts/cjs/ts/FileSystem/DefaultGitattributes.js +0 -4
  459. package/dist/ts/cjs/ts/FileSystem/DefaultGitignore.js +0 -4
  460. package/dist/ts/cjs/ts/FileSystem/FileSystem.js +0 -55
  461. package/dist/ts/cjs/ts/FileSystem/FileSystemTree.js +0 -322
  462. package/dist/ts/cjs/ts/FileSystem/Path.js +0 -63
  463. package/dist/ts/cjs/ts/Json/Assay.js +0 -234
  464. package/dist/ts/cjs/ts/Json/Comment.js +0 -119
  465. package/dist/ts/cjs/ts/Json/Data.js +0 -147
  466. package/dist/ts/cjs/ts/Json/DataFile.js +0 -54
  467. package/dist/ts/cjs/ts/Json/DataMap/DataContext.js +0 -40
  468. package/dist/ts/cjs/ts/Json/DataMap/DataMap.js +0 -30
  469. package/dist/ts/cjs/ts/Json/Decode.js +0 -231
  470. package/dist/ts/cjs/ts/Json/Encode.js +0 -117
  471. package/dist/ts/cjs/ts/Json/IDTable.js +0 -30
  472. package/dist/ts/cjs/ts/Json/Investigation.js +0 -254
  473. package/dist/ts/cjs/ts/Json/OntologyAnnotation.js +0 -207
  474. package/dist/ts/cjs/ts/Json/OntologySourceReference.js +0 -125
  475. package/dist/ts/cjs/ts/Json/Person.js +0 -338
  476. package/dist/ts/cjs/ts/Json/Process/AssayMaterials.js +0 -21
  477. package/dist/ts/cjs/ts/Json/Process/Component.js +0 -47
  478. package/dist/ts/cjs/ts/Json/Process/Factor.js +0 -58
  479. package/dist/ts/cjs/ts/Json/Process/FactorValue.js +0 -47
  480. package/dist/ts/cjs/ts/Json/Process/Material.js +0 -120
  481. package/dist/ts/cjs/ts/Json/Process/MaterialAttribute.js +0 -47
  482. package/dist/ts/cjs/ts/Json/Process/MaterialAttributeValue.js +0 -47
  483. package/dist/ts/cjs/ts/Json/Process/MaterialType.js +0 -46
  484. package/dist/ts/cjs/ts/Json/Process/Process.js +0 -109
  485. package/dist/ts/cjs/ts/Json/Process/ProcessInput.js +0 -38
  486. package/dist/ts/cjs/ts/Json/Process/ProcessOutput.js +0 -33
  487. package/dist/ts/cjs/ts/Json/Process/ProcessParameterValue.js +0 -33
  488. package/dist/ts/cjs/ts/Json/Process/Protocol.js +0 -180
  489. package/dist/ts/cjs/ts/Json/Process/ProtocolParameter.js +0 -47
  490. package/dist/ts/cjs/ts/Json/Process/Sample.js +0 -176
  491. package/dist/ts/cjs/ts/Json/Process/Source.js +0 -145
  492. package/dist/ts/cjs/ts/Json/Process/StudyMaterials.js +0 -23
  493. package/dist/ts/cjs/ts/Json/Process/Value.js +0 -39
  494. package/dist/ts/cjs/ts/Json/PropertyValue.js +0 -300
  495. package/dist/ts/cjs/ts/Json/Publication.js +0 -130
  496. package/dist/ts/cjs/ts/Json/ROCrate/LDContext.js +0 -123
  497. package/dist/ts/cjs/ts/Json/ROCrate/LDGraph.js +0 -88
  498. package/dist/ts/cjs/ts/Json/ROCrate/LDNode.js +0 -213
  499. package/dist/ts/cjs/ts/Json/ROCrate/LDRef.js +0 -25
  500. package/dist/ts/cjs/ts/Json/ROCrate/LDValue.js +0 -70
  501. package/dist/ts/cjs/ts/Json/StringTable.js +0 -70
  502. package/dist/ts/cjs/ts/Json/Study.js +0 -347
  503. package/dist/ts/cjs/ts/Json/Table/ArcTable.js +0 -217
  504. package/dist/ts/cjs/ts/Json/Table/CellTable.js +0 -58
  505. package/dist/ts/cjs/ts/Json/Table/CompositeCell.js +0 -103
  506. package/dist/ts/cjs/ts/Json/Table/CompositeHeader.js +0 -108
  507. package/dist/ts/cjs/ts/Json/Table/IOType.js +0 -16
  508. package/dist/ts/cjs/ts/Json/Table/OATable.js +0 -55
  509. package/dist/ts/cjs/ts/Json/Table/Templates.js +0 -106
  510. package/dist/ts/cjs/ts/Json/context/rocrate/isa_assay_context.js +0 -89
  511. package/dist/ts/cjs/ts/Json/context/rocrate/isa_comment_context.js +0 -47
  512. package/dist/ts/cjs/ts/Json/context/rocrate/isa_data_context.js +0 -61
  513. package/dist/ts/cjs/ts/Json/context/rocrate/isa_investigation_context.js +0 -97
  514. package/dist/ts/cjs/ts/Json/context/rocrate/isa_material_context.js +0 -58
  515. package/dist/ts/cjs/ts/Json/context/rocrate/isa_ontology_annotation_context.js +0 -56
  516. package/dist/ts/cjs/ts/Json/context/rocrate/isa_ontology_source_reference_context.js +0 -62
  517. package/dist/ts/cjs/ts/Json/context/rocrate/isa_organization_context.js +0 -42
  518. package/dist/ts/cjs/ts/Json/context/rocrate/isa_person_context.js +0 -112
  519. package/dist/ts/cjs/ts/Json/context/rocrate/isa_process_context.js +0 -82
  520. package/dist/ts/cjs/ts/Json/context/rocrate/isa_protocol_context.js +0 -85
  521. package/dist/ts/cjs/ts/Json/context/rocrate/isa_publication_context.js +0 -66
  522. package/dist/ts/cjs/ts/Json/context/rocrate/isa_sample_context.js +0 -53
  523. package/dist/ts/cjs/ts/Json/context/rocrate/isa_source_context.js +0 -53
  524. package/dist/ts/cjs/ts/Json/context/rocrate/isa_study_context.js +0 -113
  525. package/dist/ts/cjs/ts/Json/context/rocrate/property_value_context.js +0 -61
  526. package/dist/ts/cjs/ts/Json/context/rocrate/rocrate_context.js +0 -63
  527. package/dist/ts/cjs/ts/Json.js +0 -240
  528. package/dist/ts/cjs/ts/JsonIO/Assay.js +0 -104
  529. package/dist/ts/cjs/ts/JsonIO/Investigation.js +0 -104
  530. package/dist/ts/cjs/ts/JsonIO/LDObject.js +0 -107
  531. package/dist/ts/cjs/ts/JsonIO/OntologyAnnotation.js +0 -77
  532. package/dist/ts/cjs/ts/JsonIO/Study.js +0 -104
  533. package/dist/ts/cjs/ts/JsonIO/Table/Compression.js +0 -40
  534. package/dist/ts/cjs/ts/JsonIO/Table/Templates.js +0 -92
  535. package/dist/ts/cjs/ts/ROCrate/Generic/Comment.js +0 -117
  536. package/dist/ts/cjs/ts/ROCrate/Generic/Dataset.js +0 -671
  537. package/dist/ts/cjs/ts/ROCrate/Generic/DefinedTerm.js +0 -117
  538. package/dist/ts/cjs/ts/ROCrate/Generic/File.js +0 -202
  539. package/dist/ts/cjs/ts/ROCrate/Generic/LabProcess.js +0 -240
  540. package/dist/ts/cjs/ts/ROCrate/Generic/LabProtocol.js +0 -277
  541. package/dist/ts/cjs/ts/ROCrate/Generic/Organization.js +0 -73
  542. package/dist/ts/cjs/ts/ROCrate/Generic/Person.js +0 -413
  543. package/dist/ts/cjs/ts/ROCrate/Generic/PostalAddress.js +0 -161
  544. package/dist/ts/cjs/ts/ROCrate/Generic/PropertyValue.js +0 -550
  545. package/dist/ts/cjs/ts/ROCrate/Generic/Sample.js +0 -141
  546. package/dist/ts/cjs/ts/ROCrate/Generic/ScholarlyArticle.js +0 -189
  547. package/dist/ts/cjs/ts/ROCrate/Helper.js +0 -7
  548. package/dist/ts/cjs/ts/ROCrate/LDContext.js +0 -322
  549. package/dist/ts/cjs/ts/ROCrate/LDObject.js +0 -984
  550. package/dist/ts/cjs/ts/ROCrate/ROCrateContext.js +0 -44
  551. package/dist/ts/cjs/ts/ROCrateIO.js +0 -75
  552. package/dist/ts/cjs/ts/Spreadsheet/AnnotationTable/ArcTable.js +0 -176
  553. package/dist/ts/cjs/ts/Spreadsheet/AnnotationTable/CompositeCell.js +0 -68
  554. package/dist/ts/cjs/ts/Spreadsheet/AnnotationTable/CompositeColumn.js +0 -150
  555. package/dist/ts/cjs/ts/Spreadsheet/AnnotationTable/CompositeHeader.js +0 -476
  556. package/dist/ts/cjs/ts/Spreadsheet/ArcAssay.js +0 -218
  557. package/dist/ts/cjs/ts/Spreadsheet/ArcInvestigation.js +0 -356
  558. package/dist/ts/cjs/ts/Spreadsheet/ArcRun.js +0 -177
  559. package/dist/ts/cjs/ts/Spreadsheet/ArcStudy.js +0 -130
  560. package/dist/ts/cjs/ts/Spreadsheet/ArcWorkflow.js +0 -166
  561. package/dist/ts/cjs/ts/Spreadsheet/CollectionAux.js +0 -128
  562. package/dist/ts/cjs/ts/Spreadsheet/DataMap.js +0 -41
  563. package/dist/ts/cjs/ts/Spreadsheet/DataMapTable/DataMapColumn.js +0 -43
  564. package/dist/ts/cjs/ts/Spreadsheet/DataMapTable/DataMapHeader.js +0 -480
  565. package/dist/ts/cjs/ts/Spreadsheet/DataMapTable/DataMapTable.js +0 -105
  566. package/dist/ts/cjs/ts/Spreadsheet/Metadata/Assays.js +0 -98
  567. package/dist/ts/cjs/ts/Spreadsheet/Metadata/Comment.js +0 -68
  568. package/dist/ts/cjs/ts/Spreadsheet/Metadata/Contacts.js +0 -92
  569. package/dist/ts/cjs/ts/Spreadsheet/Metadata/Conversions.js +0 -187
  570. package/dist/ts/cjs/ts/Spreadsheet/Metadata/DesignDescriptors.js +0 -25
  571. package/dist/ts/cjs/ts/Spreadsheet/Metadata/Factors.js +0 -83
  572. package/dist/ts/cjs/ts/Spreadsheet/Metadata/OntologyAnnotation.js +0 -65
  573. package/dist/ts/cjs/ts/Spreadsheet/Metadata/OntologySourceReference.js +0 -68
  574. package/dist/ts/cjs/ts/Spreadsheet/Metadata/Protocols.js +0 -103
  575. package/dist/ts/cjs/ts/Spreadsheet/Metadata/Publication.js +0 -88
  576. package/dist/ts/cjs/ts/Spreadsheet/Metadata/Run.js +0 -99
  577. package/dist/ts/cjs/ts/Spreadsheet/Metadata/SparseTable.js +0 -457
  578. package/dist/ts/cjs/ts/Spreadsheet/Metadata/Study.js +0 -259
  579. package/dist/ts/cjs/ts/Spreadsheet/Metadata/Workflow.js +0 -111
  580. package/dist/ts/cjs/ts/Template.Web.js +0 -29
  581. package/dist/ts/cjs/ts/ValidationPackages/ValidationPackage.js +0 -63
  582. package/dist/ts/cjs/ts/ValidationPackages/ValidationPackagesConfig.js +0 -90
  583. package/dist/ts/cjs/ts/WebRequest/WebRequest.Node.js +0 -17
  584. package/dist/ts/cjs/ts/WebRequest/WebRequest.js +0 -20
  585. package/dist/ts/cjs/ts/Xlsx.js +0 -133
  586. package/dist/ts/cjs/ts/Yaml/Encode.js +0 -9
  587. package/dist/ts/cjs/ts/Yaml/ValidationPackage.js +0 -49
  588. package/dist/ts/cjs/ts/Yaml/ValidationPackagesConfig.js +0 -50
  589. package/dist/ts/cjs/ts/fable_modules/DynamicObj.7.0.1/DynamicObj.fs.js +0 -444
  590. package/dist/ts/cjs/ts/fable_modules/DynamicObj.7.0.1/FableJS.fs.js +0 -142
  591. package/dist/ts/cjs/ts/fable_modules/DynamicObj.7.0.1/HashCodes.fs.js +0 -53
  592. package/dist/ts/cjs/ts/fable_modules/DynamicObj.7.0.1/PropertyHelper.fs.js +0 -23
  593. package/dist/ts/cjs/ts/fable_modules/DynamicObj.7.0.1/ReflectionUtils.fs.js +0 -87
  594. package/dist/ts/cjs/ts/fable_modules/Fable.Exceljs.1.6.0/Cell.fs.js +0 -2
  595. package/dist/ts/cjs/ts/fable_modules/Fable.Exceljs.1.6.0/Column.fs.js +0 -2
  596. package/dist/ts/cjs/ts/fable_modules/Fable.Exceljs.1.6.0/ExcelJs.fs.js +0 -5
  597. package/dist/ts/cjs/ts/fable_modules/Fable.Exceljs.1.6.0/Row.fs.js +0 -2
  598. package/dist/ts/cjs/ts/fable_modules/Fable.Exceljs.1.6.0/Unions.fs.js +0 -123
  599. package/dist/ts/cjs/ts/fable_modules/Fable.Exceljs.1.6.0/Workbook.fs.js +0 -2
  600. package/dist/ts/cjs/ts/fable_modules/Fable.Exceljs.1.6.0/Worksheet.fs.js +0 -2
  601. package/dist/ts/cjs/ts/fable_modules/Fable.Exceljs.1.6.0/Xlsx.fs.js +0 -2
  602. package/dist/ts/cjs/ts/fable_modules/Fable.Fetch.2.6.0/Fetch.fs.js +0 -360
  603. package/dist/ts/cjs/ts/fable_modules/Fable.Promise.3.2.0/Promise.fs.js +0 -220
  604. package/dist/ts/cjs/ts/fable_modules/Fable.Promise.3.2.0/PromiseImpl.fs.js +0 -20
  605. package/dist/ts/cjs/ts/fable_modules/Fable.SimpleHttp.3.5.0/Http.fs.js +0 -431
  606. package/dist/ts/cjs/ts/fable_modules/Fable.SimpleHttp.3.5.0/Types.fs.js +0 -186
  607. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Cells/FsCell.fs.js +0 -477
  608. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Cells/FsCellsCollection.fs.js +0 -521
  609. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/CellBuilder.fs.js +0 -211
  610. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/Expression.fs.js +0 -58
  611. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/RowBuilder.fs.js +0 -139
  612. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/Types.fs.js +0 -365
  613. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/FsAddress.fs.js +0 -259
  614. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/FsColumn.fs.js +0 -127
  615. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/FsRow.fs.js +0 -137
  616. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/FsWorkbook.fs.js +0 -140
  617. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/FsWorksheet.fs.js +0 -435
  618. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Cell.fs.js +0 -69
  619. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Column.fs.js +0 -40
  620. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Row.fs.js +0 -40
  621. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Table.fs.js +0 -31
  622. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Value.fs.js +0 -78
  623. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Workbook.fs.js +0 -46
  624. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Worksheet.fs.js +0 -134
  625. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRange.fs.js +0 -43
  626. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeAddress.fs.js +0 -238
  627. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeBase.fs.js +0 -93
  628. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeColumn.fs.js +0 -76
  629. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeRow.fs.js +0 -42
  630. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Tables/FsTable.fs.js +0 -332
  631. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.6.3.1/Tables/FsTableField.fs.js +0 -175
  632. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Cell.fs.js +0 -80
  633. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.Js.6.3.1/FsExtensions.fs.js +0 -65
  634. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Json.fs.js +0 -53
  635. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Table.fs.js +0 -55
  636. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Workbook.fs.js +0 -34
  637. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Worksheet.fs.js +0 -68
  638. package/dist/ts/cjs/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Xlsx.fs.js +0 -72
  639. package/dist/ts/cjs/ts/fable_modules/Thoth.Json.Core.0.4.0/Decode.fs.js +0 -1316
  640. package/dist/ts/cjs/ts/fable_modules/Thoth.Json.Core.0.4.0/Encode.fs.js +0 -200
  641. package/dist/ts/cjs/ts/fable_modules/Thoth.Json.Core.0.4.0/Types.fs.js +0 -103
  642. package/dist/ts/cjs/ts/fable_modules/Thoth.Json.JavaScript.0.3.0/Decode.fs.js +0 -97
  643. package/dist/ts/cjs/ts/fable_modules/Thoth.Json.JavaScript.0.3.0/Encode.fs.js +0 -59
  644. package/dist/ts/cjs/ts/fable_modules/YAMLicious.0.0.3/Decode.fs.js +0 -1723
  645. package/dist/ts/cjs/ts/fable_modules/YAMLicious.0.0.3/Encode.fs.js +0 -75
  646. package/dist/ts/cjs/ts/fable_modules/YAMLicious.0.0.3/Interop/JsInterop.fs.js +0 -13
  647. package/dist/ts/cjs/ts/fable_modules/YAMLicious.0.0.3/Persil.fs.js +0 -50
  648. package/dist/ts/cjs/ts/fable_modules/YAMLicious.0.0.3/Preprocessing.fs.js +0 -104
  649. package/dist/ts/cjs/ts/fable_modules/YAMLicious.0.0.3/Reader.fs.js +0 -527
  650. package/dist/ts/cjs/ts/fable_modules/YAMLicious.0.0.3/Regex.fs.js +0 -12
  651. package/dist/ts/cjs/ts/fable_modules/YAMLicious.0.0.3/RegexActivePatterns.fs.js +0 -235
  652. package/dist/ts/cjs/ts/fable_modules/YAMLicious.0.0.3/Writer.fs.js +0 -166
  653. package/dist/ts/cjs/ts/fable_modules/YAMLicious.0.0.3/YAMLiciousTypes.fs.js +0 -174
  654. package/dist/ts/esm/index.js +0 -60
  655. package/dist/ts/esm/ts/ARC.js +0 -959
  656. package/dist/ts/esm/ts/Contract/ARC.js +0 -58
  657. package/dist/ts/esm/ts/Contract/ArcAssay.js +0 -93
  658. package/dist/ts/esm/ts/Contract/ArcInvestigation.js +0 -69
  659. package/dist/ts/esm/ts/Contract/ArcRun.js +0 -93
  660. package/dist/ts/esm/ts/Contract/ArcStudy.js +0 -93
  661. package/dist/ts/esm/ts/Contract/ArcWorkflow.js +0 -94
  662. package/dist/ts/esm/ts/Contract/Contract.js +0 -87
  663. package/dist/ts/esm/ts/Contract/Datamap.js +0 -287
  664. package/dist/ts/esm/ts/Contract/Git.js +0 -72
  665. package/dist/ts/esm/ts/Contract/ValidationPackagesConfig.js +0 -88
  666. package/dist/ts/esm/ts/ContractIO/ContractIO.js +0 -207
  667. package/dist/ts/esm/ts/ContractIO/FileSystemHelper.js +0 -176
  668. package/dist/ts/esm/ts/Conversion.js +0 -1654
  669. package/dist/ts/esm/ts/Core/ArcTypes.js +0 -3728
  670. package/dist/ts/esm/ts/Core/Comment.js +0 -98
  671. package/dist/ts/esm/ts/Core/CommentList.js +0 -126
  672. package/dist/ts/esm/ts/Core/Conversion.js +0 -1145
  673. package/dist/ts/esm/ts/Core/Data.js +0 -188
  674. package/dist/ts/esm/ts/Core/DataContext.js +0 -119
  675. package/dist/ts/esm/ts/Core/DataFile.js +0 -82
  676. package/dist/ts/esm/ts/Core/DataMap.js +0 -156
  677. package/dist/ts/esm/ts/Core/Helper/Collections.js +0 -462
  678. package/dist/ts/esm/ts/Core/Helper/HashCodes.js +0 -32
  679. package/dist/ts/esm/ts/Core/Helper/Identifier.js +0 -298
  680. package/dist/ts/esm/ts/Core/Helper/ORCID.js +0 -34
  681. package/dist/ts/esm/ts/Core/Helper/Printer.js +0 -1
  682. package/dist/ts/esm/ts/Core/Helper/Regex.js +0 -579
  683. package/dist/ts/esm/ts/Core/Helper/SemVer.js +0 -50
  684. package/dist/ts/esm/ts/Core/Helper/Url.js +0 -30
  685. package/dist/ts/esm/ts/Core/IPropertyValue.js +0 -1
  686. package/dist/ts/esm/ts/Core/IdentifierSetters.js +0 -21
  687. package/dist/ts/esm/ts/Core/OntologyAnnotation.js +0 -213
  688. package/dist/ts/esm/ts/Core/OntologySourceReference.js +0 -88
  689. package/dist/ts/esm/ts/Core/Person.js +0 -190
  690. package/dist/ts/esm/ts/Core/Process/ColumnIndex.js +0 -204
  691. package/dist/ts/esm/ts/Core/Process/Component.js +0 -180
  692. package/dist/ts/esm/ts/Core/Process/Factor.js +0 -106
  693. package/dist/ts/esm/ts/Core/Process/FactorValue.js +0 -127
  694. package/dist/ts/esm/ts/Core/Process/Material.js +0 -57
  695. package/dist/ts/esm/ts/Core/Process/MaterialAttribute.js +0 -86
  696. package/dist/ts/esm/ts/Core/Process/MaterialAttributeValue.js +0 -142
  697. package/dist/ts/esm/ts/Core/Process/MaterialType.js +0 -42
  698. package/dist/ts/esm/ts/Core/Process/Process.js +0 -341
  699. package/dist/ts/esm/ts/Core/Process/ProcessInput.js +0 -283
  700. package/dist/ts/esm/ts/Core/Process/ProcessOutput.js +0 -248
  701. package/dist/ts/esm/ts/Core/Process/ProcessParameterValue.js +0 -136
  702. package/dist/ts/esm/ts/Core/Process/ProcessSequence.js +0 -227
  703. package/dist/ts/esm/ts/Core/Process/Protocol.js +0 -210
  704. package/dist/ts/esm/ts/Core/Process/ProtocolParameter.js +0 -70
  705. package/dist/ts/esm/ts/Core/Process/Sample.js +0 -59
  706. package/dist/ts/esm/ts/Core/Process/Source.js +0 -45
  707. package/dist/ts/esm/ts/Core/Publication.js +0 -112
  708. package/dist/ts/esm/ts/Core/Table/ArcTable.js +0 -917
  709. package/dist/ts/esm/ts/Core/Table/ArcTableAux.js +0 -1213
  710. package/dist/ts/esm/ts/Core/Table/ArcTables.js +0 -461
  711. package/dist/ts/esm/ts/Core/Table/CompositeCell.js +0 -308
  712. package/dist/ts/esm/ts/Core/Table/CompositeColumn.js +0 -55
  713. package/dist/ts/esm/ts/Core/Table/CompositeHeader.js +0 -691
  714. package/dist/ts/esm/ts/Core/Template.js +0 -186
  715. package/dist/ts/esm/ts/Core/Templates.js +0 -79
  716. package/dist/ts/esm/ts/Core/URI.js +0 -16
  717. package/dist/ts/esm/ts/Core/Value.js +0 -182
  718. package/dist/ts/esm/ts/CrossAsync.js +0 -27
  719. package/dist/ts/esm/ts/FileSystem/Commit.js +0 -15
  720. package/dist/ts/esm/ts/FileSystem/DefaultGitattributes.js +0 -1
  721. package/dist/ts/esm/ts/FileSystem/DefaultGitignore.js +0 -1
  722. package/dist/ts/esm/ts/FileSystem/FileSystem.js +0 -50
  723. package/dist/ts/esm/ts/FileSystem/FileSystemTree.js +0 -315
  724. package/dist/ts/esm/ts/FileSystem/Path.js +0 -51
  725. package/dist/ts/esm/ts/Json/Assay.js +0 -225
  726. package/dist/ts/esm/ts/Json/Comment.js +0 -111
  727. package/dist/ts/esm/ts/Json/Data.js +0 -138
  728. package/dist/ts/esm/ts/Json/DataFile.js +0 -50
  729. package/dist/ts/esm/ts/Json/DataMap/DataContext.js +0 -36
  730. package/dist/ts/esm/ts/Json/DataMap/DataMap.js +0 -24
  731. package/dist/ts/esm/ts/Json/Decode.js +0 -219
  732. package/dist/ts/esm/ts/Json/Encode.js +0 -103
  733. package/dist/ts/esm/ts/Json/IDTable.js +0 -26
  734. package/dist/ts/esm/ts/Json/Investigation.js +0 -244
  735. package/dist/ts/esm/ts/Json/OntologyAnnotation.js +0 -197
  736. package/dist/ts/esm/ts/Json/OntologySourceReference.js +0 -118
  737. package/dist/ts/esm/ts/Json/Person.js +0 -329
  738. package/dist/ts/esm/ts/Json/Process/AssayMaterials.js +0 -18
  739. package/dist/ts/esm/ts/Json/Process/Component.js +0 -42
  740. package/dist/ts/esm/ts/Json/Process/Factor.js +0 -53
  741. package/dist/ts/esm/ts/Json/Process/FactorValue.js +0 -42
  742. package/dist/ts/esm/ts/Json/Process/Material.js +0 -114
  743. package/dist/ts/esm/ts/Json/Process/MaterialAttribute.js +0 -42
  744. package/dist/ts/esm/ts/Json/Process/MaterialAttributeValue.js +0 -42
  745. package/dist/ts/esm/ts/Json/Process/MaterialType.js +0 -42
  746. package/dist/ts/esm/ts/Json/Process/Process.js +0 -103
  747. package/dist/ts/esm/ts/Json/Process/ProcessInput.js +0 -33
  748. package/dist/ts/esm/ts/Json/Process/ProcessOutput.js +0 -28
  749. package/dist/ts/esm/ts/Json/Process/ProcessParameterValue.js +0 -28
  750. package/dist/ts/esm/ts/Json/Process/Protocol.js +0 -174
  751. package/dist/ts/esm/ts/Json/Process/ProtocolParameter.js +0 -42
  752. package/dist/ts/esm/ts/Json/Process/Sample.js +0 -170
  753. package/dist/ts/esm/ts/Json/Process/Source.js +0 -139
  754. package/dist/ts/esm/ts/Json/Process/StudyMaterials.js +0 -20
  755. package/dist/ts/esm/ts/Json/Process/Value.js +0 -35
  756. package/dist/ts/esm/ts/Json/PropertyValue.js +0 -295
  757. package/dist/ts/esm/ts/Json/Publication.js +0 -123
  758. package/dist/ts/esm/ts/Json/ROCrate/LDContext.js +0 -119
  759. package/dist/ts/esm/ts/Json/ROCrate/LDGraph.js +0 -84
  760. package/dist/ts/esm/ts/Json/ROCrate/LDNode.js +0 -207
  761. package/dist/ts/esm/ts/Json/ROCrate/LDRef.js +0 -21
  762. package/dist/ts/esm/ts/Json/ROCrate/LDValue.js +0 -65
  763. package/dist/ts/esm/ts/Json/StringTable.js +0 -63
  764. package/dist/ts/esm/ts/Json/Study.js +0 -337
  765. package/dist/ts/esm/ts/Json/Table/ArcTable.js +0 -208
  766. package/dist/ts/esm/ts/Json/Table/CellTable.js +0 -51
  767. package/dist/ts/esm/ts/Json/Table/CompositeCell.js +0 -97
  768. package/dist/ts/esm/ts/Json/Table/CompositeHeader.js +0 -104
  769. package/dist/ts/esm/ts/Json/Table/IOType.js +0 -12
  770. package/dist/ts/esm/ts/Json/Table/OATable.js +0 -48
  771. package/dist/ts/esm/ts/Json/Table/Templates.js +0 -98
  772. package/dist/ts/esm/ts/Json/context/rocrate/isa_assay_context.js +0 -84
  773. package/dist/ts/esm/ts/Json/context/rocrate/isa_comment_context.js +0 -42
  774. package/dist/ts/esm/ts/Json/context/rocrate/isa_data_context.js +0 -56
  775. package/dist/ts/esm/ts/Json/context/rocrate/isa_investigation_context.js +0 -92
  776. package/dist/ts/esm/ts/Json/context/rocrate/isa_material_context.js +0 -53
  777. package/dist/ts/esm/ts/Json/context/rocrate/isa_ontology_annotation_context.js +0 -51
  778. package/dist/ts/esm/ts/Json/context/rocrate/isa_ontology_source_reference_context.js +0 -57
  779. package/dist/ts/esm/ts/Json/context/rocrate/isa_organization_context.js +0 -37
  780. package/dist/ts/esm/ts/Json/context/rocrate/isa_person_context.js +0 -107
  781. package/dist/ts/esm/ts/Json/context/rocrate/isa_process_context.js +0 -77
  782. package/dist/ts/esm/ts/Json/context/rocrate/isa_protocol_context.js +0 -80
  783. package/dist/ts/esm/ts/Json/context/rocrate/isa_publication_context.js +0 -61
  784. package/dist/ts/esm/ts/Json/context/rocrate/isa_sample_context.js +0 -48
  785. package/dist/ts/esm/ts/Json/context/rocrate/isa_source_context.js +0 -48
  786. package/dist/ts/esm/ts/Json/context/rocrate/isa_study_context.js +0 -108
  787. package/dist/ts/esm/ts/Json/context/rocrate/property_value_context.js +0 -58
  788. package/dist/ts/esm/ts/Json/context/rocrate/rocrate_context.js +0 -58
  789. package/dist/ts/esm/ts/Json.js +0 -214
  790. package/dist/ts/esm/ts/JsonIO/Assay.js +0 -90
  791. package/dist/ts/esm/ts/JsonIO/Investigation.js +0 -90
  792. package/dist/ts/esm/ts/JsonIO/LDObject.js +0 -94
  793. package/dist/ts/esm/ts/JsonIO/OntologyAnnotation.js +0 -66
  794. package/dist/ts/esm/ts/JsonIO/Study.js +0 -90
  795. package/dist/ts/esm/ts/JsonIO/Table/Compression.js +0 -36
  796. package/dist/ts/esm/ts/JsonIO/Table/Templates.js +0 -80
  797. package/dist/ts/esm/ts/ROCrate/Generic/Comment.js +0 -112
  798. package/dist/ts/esm/ts/ROCrate/Generic/Dataset.js +0 -666
  799. package/dist/ts/esm/ts/ROCrate/Generic/DefinedTerm.js +0 -112
  800. package/dist/ts/esm/ts/ROCrate/Generic/File.js +0 -197
  801. package/dist/ts/esm/ts/ROCrate/Generic/LabProcess.js +0 -235
  802. package/dist/ts/esm/ts/ROCrate/Generic/LabProtocol.js +0 -272
  803. package/dist/ts/esm/ts/ROCrate/Generic/Organization.js +0 -68
  804. package/dist/ts/esm/ts/ROCrate/Generic/Person.js +0 -408
  805. package/dist/ts/esm/ts/ROCrate/Generic/PostalAddress.js +0 -156
  806. package/dist/ts/esm/ts/ROCrate/Generic/PropertyValue.js +0 -545
  807. package/dist/ts/esm/ts/ROCrate/Generic/Sample.js +0 -136
  808. package/dist/ts/esm/ts/ROCrate/Generic/ScholarlyArticle.js +0 -184
  809. package/dist/ts/esm/ts/ROCrate/Helper.js +0 -4
  810. package/dist/ts/esm/ts/ROCrate/LDContext.js +0 -313
  811. package/dist/ts/esm/ts/ROCrate/LDObject.js +0 -967
  812. package/dist/ts/esm/ts/ROCrate/ROCrateContext.js +0 -38
  813. package/dist/ts/esm/ts/ROCrateIO.js +0 -65
  814. package/dist/ts/esm/ts/Spreadsheet/AnnotationTable/ArcTable.js +0 -164
  815. package/dist/ts/esm/ts/Spreadsheet/AnnotationTable/CompositeCell.js +0 -61
  816. package/dist/ts/esm/ts/Spreadsheet/AnnotationTable/CompositeColumn.js +0 -141
  817. package/dist/ts/esm/ts/Spreadsheet/AnnotationTable/CompositeHeader.js +0 -460
  818. package/dist/ts/esm/ts/Spreadsheet/ArcAssay.js +0 -204
  819. package/dist/ts/esm/ts/Spreadsheet/ArcInvestigation.js +0 -334
  820. package/dist/ts/esm/ts/Spreadsheet/ArcRun.js +0 -163
  821. package/dist/ts/esm/ts/Spreadsheet/ArcStudy.js +0 -117
  822. package/dist/ts/esm/ts/Spreadsheet/ArcWorkflow.js +0 -152
  823. package/dist/ts/esm/ts/Spreadsheet/CollectionAux.js +0 -117
  824. package/dist/ts/esm/ts/Spreadsheet/DataMap.js +0 -37
  825. package/dist/ts/esm/ts/Spreadsheet/DataMapTable/DataMapColumn.js +0 -39
  826. package/dist/ts/esm/ts/Spreadsheet/DataMapTable/DataMapHeader.js +0 -463
  827. package/dist/ts/esm/ts/Spreadsheet/DataMapTable/DataMapTable.js +0 -97
  828. package/dist/ts/esm/ts/Spreadsheet/Metadata/Assays.js +0 -90
  829. package/dist/ts/esm/ts/Spreadsheet/Metadata/Comment.js +0 -59
  830. package/dist/ts/esm/ts/Spreadsheet/Metadata/Contacts.js +0 -84
  831. package/dist/ts/esm/ts/Spreadsheet/Metadata/Conversions.js +0 -176
  832. package/dist/ts/esm/ts/Spreadsheet/Metadata/DesignDescriptors.js +0 -18
  833. package/dist/ts/esm/ts/Spreadsheet/Metadata/Factors.js +0 -75
  834. package/dist/ts/esm/ts/Spreadsheet/Metadata/OntologyAnnotation.js +0 -59
  835. package/dist/ts/esm/ts/Spreadsheet/Metadata/OntologySourceReference.js +0 -60
  836. package/dist/ts/esm/ts/Spreadsheet/Metadata/Protocols.js +0 -95
  837. package/dist/ts/esm/ts/Spreadsheet/Metadata/Publication.js +0 -80
  838. package/dist/ts/esm/ts/Spreadsheet/Metadata/Run.js +0 -91
  839. package/dist/ts/esm/ts/Spreadsheet/Metadata/SparseTable.js +0 -434
  840. package/dist/ts/esm/ts/Spreadsheet/Metadata/Study.js +0 -245
  841. package/dist/ts/esm/ts/Spreadsheet/Metadata/Workflow.js +0 -103
  842. package/dist/ts/esm/ts/Template.Web.js +0 -23
  843. package/dist/ts/esm/ts/ValidationPackages/ValidationPackage.js +0 -57
  844. package/dist/ts/esm/ts/ValidationPackages/ValidationPackagesConfig.js +0 -84
  845. package/dist/ts/esm/ts/WebRequest/WebRequest.Node.js +0 -13
  846. package/dist/ts/esm/ts/WebRequest/WebRequest.js +0 -17
  847. package/dist/ts/esm/ts/Xlsx.js +0 -116
  848. package/dist/ts/esm/ts/Yaml/Encode.js +0 -5
  849. package/dist/ts/esm/ts/Yaml/ValidationPackage.js +0 -41
  850. package/dist/ts/esm/ts/Yaml/ValidationPackagesConfig.js +0 -42
  851. package/dist/ts/esm/ts/fable_modules/DynamicObj.7.0.1/DynamicObj.fs.js +0 -432
  852. package/dist/ts/esm/ts/fable_modules/DynamicObj.7.0.1/FableJS.fs.js +0 -118
  853. package/dist/ts/esm/ts/fable_modules/DynamicObj.7.0.1/HashCodes.fs.js +0 -43
  854. package/dist/ts/esm/ts/fable_modules/DynamicObj.7.0.1/PropertyHelper.fs.js +0 -18
  855. package/dist/ts/esm/ts/fable_modules/DynamicObj.7.0.1/ReflectionUtils.fs.js +0 -79
  856. package/dist/ts/esm/ts/fable_modules/Fable.Exceljs.1.6.0/Cell.fs.js +0 -1
  857. package/dist/ts/esm/ts/fable_modules/Fable.Exceljs.1.6.0/Column.fs.js +0 -1
  858. package/dist/ts/esm/ts/fable_modules/Fable.Exceljs.1.6.0/ExcelJs.fs.js +0 -2
  859. package/dist/ts/esm/ts/fable_modules/Fable.Exceljs.1.6.0/Row.fs.js +0 -1
  860. package/dist/ts/esm/ts/fable_modules/Fable.Exceljs.1.6.0/Unions.fs.js +0 -102
  861. package/dist/ts/esm/ts/fable_modules/Fable.Exceljs.1.6.0/Workbook.fs.js +0 -1
  862. package/dist/ts/esm/ts/fable_modules/Fable.Exceljs.1.6.0/Worksheet.fs.js +0 -1
  863. package/dist/ts/esm/ts/fable_modules/Fable.Exceljs.1.6.0/Xlsx.fs.js +0 -1
  864. package/dist/ts/esm/ts/fable_modules/Fable.Fetch.2.6.0/Fetch.fs.js +0 -281
  865. package/dist/ts/esm/ts/fable_modules/Fable.Promise.3.2.0/Promise.fs.js +0 -203
  866. package/dist/ts/esm/ts/fable_modules/Fable.Promise.3.2.0/PromiseImpl.fs.js +0 -16
  867. package/dist/ts/esm/ts/fable_modules/Fable.SimpleHttp.3.5.0/Http.fs.js +0 -380
  868. package/dist/ts/esm/ts/fable_modules/Fable.SimpleHttp.3.5.0/Types.fs.js +0 -151
  869. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Cells/FsCell.fs.js +0 -463
  870. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Cells/FsCellsCollection.fs.js +0 -473
  871. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/CellBuilder.fs.js +0 -189
  872. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/Expression.fs.js +0 -43
  873. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/RowBuilder.fs.js +0 -122
  874. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/Types.fs.js +0 -306
  875. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/FsAddress.fs.js +0 -224
  876. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/FsColumn.fs.js +0 -121
  877. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/FsRow.fs.js +0 -131
  878. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/FsWorkbook.fs.js +0 -134
  879. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/FsWorksheet.fs.js +0 -429
  880. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Cell.fs.js +0 -62
  881. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Column.fs.js +0 -35
  882. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Row.fs.js +0 -35
  883. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Table.fs.js +0 -27
  884. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Value.fs.js +0 -74
  885. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Workbook.fs.js +0 -41
  886. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Worksheet.fs.js +0 -129
  887. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRange.fs.js +0 -33
  888. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeAddress.fs.js +0 -206
  889. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeBase.fs.js +0 -80
  890. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeColumn.fs.js +0 -60
  891. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeRow.fs.js +0 -31
  892. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Tables/FsTable.fs.js +0 -326
  893. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.6.3.1/Tables/FsTableField.fs.js +0 -152
  894. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Cell.fs.js +0 -76
  895. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.Js.6.3.1/FsExtensions.fs.js +0 -48
  896. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Json.fs.js +0 -48
  897. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Table.fs.js +0 -51
  898. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Workbook.fs.js +0 -30
  899. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Worksheet.fs.js +0 -64
  900. package/dist/ts/esm/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Xlsx.fs.js +0 -67
  901. package/dist/ts/esm/ts/fable_modules/Thoth.Json.Core.0.4.0/Decode.fs.js +0 -1269
  902. package/dist/ts/esm/ts/fable_modules/Thoth.Json.Core.0.4.0/Encode.fs.js +0 -178
  903. package/dist/ts/esm/ts/fable_modules/Thoth.Json.Core.0.4.0/Types.fs.js +0 -79
  904. package/dist/ts/esm/ts/fable_modules/Thoth.Json.JavaScript.0.3.0/Decode.fs.js +0 -91
  905. package/dist/ts/esm/ts/fable_modules/Thoth.Json.JavaScript.0.3.0/Encode.fs.js +0 -55
  906. package/dist/ts/esm/ts/fable_modules/YAMLicious.0.0.3/Decode.fs.js +0 -1692
  907. package/dist/ts/esm/ts/fable_modules/YAMLicious.0.0.3/Encode.fs.js +0 -57
  908. package/dist/ts/esm/ts/fable_modules/YAMLicious.0.0.3/Interop/JsInterop.fs.js +0 -9
  909. package/dist/ts/esm/ts/fable_modules/YAMLicious.0.0.3/Persil.fs.js +0 -43
  910. package/dist/ts/esm/ts/fable_modules/YAMLicious.0.0.3/Preprocessing.fs.js +0 -96
  911. package/dist/ts/esm/ts/fable_modules/YAMLicious.0.0.3/Reader.fs.js +0 -522
  912. package/dist/ts/esm/ts/fable_modules/YAMLicious.0.0.3/Regex.fs.js +0 -9
  913. package/dist/ts/esm/ts/fable_modules/YAMLicious.0.0.3/RegexActivePatterns.fs.js +0 -221
  914. package/dist/ts/esm/ts/fable_modules/YAMLicious.0.0.3/Writer.fs.js +0 -156
  915. package/dist/ts/esm/ts/fable_modules/YAMLicious.0.0.3/YAMLiciousTypes.fs.js +0 -148
  916. package/dist/ts/types/index.d.ts +0 -60
  917. package/dist/ts/types/index.d.ts.map +0 -1
  918. package/dist/ts/types/ts/ARC.d.ts +0 -80
  919. package/dist/ts/types/ts/ARC.d.ts.map +0 -1
  920. package/dist/ts/types/ts/Contract/ARC.d.ts +0 -7
  921. package/dist/ts/types/ts/Contract/ARC.d.ts.map +0 -1
  922. package/dist/ts/types/ts/Contract/ArcAssay.d.ts +0 -12
  923. package/dist/ts/types/ts/Contract/ArcAssay.d.ts.map +0 -1
  924. package/dist/ts/types/ts/Contract/ArcInvestigation.d.ts +0 -10
  925. package/dist/ts/types/ts/Contract/ArcInvestigation.d.ts.map +0 -1
  926. package/dist/ts/types/ts/Contract/ArcRun.d.ts +0 -12
  927. package/dist/ts/types/ts/Contract/ArcRun.d.ts.map +0 -1
  928. package/dist/ts/types/ts/Contract/ArcStudy.d.ts +0 -13
  929. package/dist/ts/types/ts/Contract/ArcStudy.d.ts.map +0 -1
  930. package/dist/ts/types/ts/Contract/ArcWorkflow.d.ts +0 -12
  931. package/dist/ts/types/ts/Contract/ArcWorkflow.d.ts.map +0 -1
  932. package/dist/ts/types/ts/Contract/Contract.d.ts +0 -39
  933. package/dist/ts/types/ts/Contract/Contract.d.ts.map +0 -1
  934. package/dist/ts/types/ts/Contract/Datamap.d.ts +0 -29
  935. package/dist/ts/types/ts/Contract/Datamap.d.ts.map +0 -1
  936. package/dist/ts/types/ts/Contract/Git.d.ts +0 -28
  937. package/dist/ts/types/ts/Contract/Git.d.ts.map +0 -1
  938. package/dist/ts/types/ts/Contract/ValidationPackagesConfig.d.ts +0 -12
  939. package/dist/ts/types/ts/Contract/ValidationPackagesConfig.d.ts.map +0 -1
  940. package/dist/ts/types/ts/ContractIO/ContractIO.d.ts +0 -11
  941. package/dist/ts/types/ts/ContractIO/ContractIO.d.ts.map +0 -1
  942. package/dist/ts/types/ts/ContractIO/FileSystemHelper.d.ts +0 -33
  943. package/dist/ts/types/ts/ContractIO/FileSystemHelper.d.ts.map +0 -1
  944. package/dist/ts/types/ts/Conversion.d.ts +0 -291
  945. package/dist/ts/types/ts/Conversion.d.ts.map +0 -1
  946. package/dist/ts/types/ts/Core/ArcTypes.d.ts +0 -620
  947. package/dist/ts/types/ts/Core/ArcTypes.d.ts.map +0 -1
  948. package/dist/ts/types/ts/Core/Comment.d.ts +0 -35
  949. package/dist/ts/types/ts/Core/Comment.d.ts.map +0 -1
  950. package/dist/ts/types/ts/Core/CommentList.d.ts +0 -28
  951. package/dist/ts/types/ts/Core/CommentList.d.ts.map +0 -1
  952. package/dist/ts/types/ts/Core/Conversion.d.ts +0 -215
  953. package/dist/ts/types/ts/Core/Conversion.d.ts.map +0 -1
  954. package/dist/ts/types/ts/Core/Data.d.ts +0 -49
  955. package/dist/ts/types/ts/Core/Data.d.ts.map +0 -1
  956. package/dist/ts/types/ts/Core/DataContext.d.ts +0 -47
  957. package/dist/ts/types/ts/Core/DataContext.d.ts.map +0 -1
  958. package/dist/ts/types/ts/Core/DataFile.d.ts +0 -27
  959. package/dist/ts/types/ts/Core/DataFile.d.ts.map +0 -1
  960. package/dist/ts/types/ts/Core/DataMap.d.ts +0 -52
  961. package/dist/ts/types/ts/Core/DataMap.d.ts.map +0 -1
  962. package/dist/ts/types/ts/Core/Helper/Collections.d.ts +0 -61
  963. package/dist/ts/types/ts/Core/Helper/Collections.d.ts.map +0 -1
  964. package/dist/ts/types/ts/Core/Helper/HashCodes.d.ts +0 -9
  965. package/dist/ts/types/ts/Core/Helper/HashCodes.d.ts.map +0 -1
  966. package/dist/ts/types/ts/Core/Helper/Identifier.d.ts +0 -119
  967. package/dist/ts/types/ts/Core/Helper/Identifier.d.ts.map +0 -1
  968. package/dist/ts/types/ts/Core/Helper/ORCID.d.ts +0 -7
  969. package/dist/ts/types/ts/Core/Helper/ORCID.d.ts.map +0 -1
  970. package/dist/ts/types/ts/Core/Helper/Printer.d.ts +0 -5
  971. package/dist/ts/types/ts/Core/Helper/Printer.d.ts.map +0 -1
  972. package/dist/ts/types/ts/Core/Helper/Regex.d.ts +0 -194
  973. package/dist/ts/types/ts/Core/Helper/Regex.d.ts.map +0 -1
  974. package/dist/ts/types/ts/Core/Helper/SemVer.d.ts +0 -20
  975. package/dist/ts/types/ts/Core/Helper/SemVer.d.ts.map +0 -1
  976. package/dist/ts/types/ts/Core/Helper/Url.d.ts +0 -10
  977. package/dist/ts/types/ts/Core/Helper/Url.d.ts.map +0 -1
  978. package/dist/ts/types/ts/Core/IPropertyValue.d.ts +0 -13
  979. package/dist/ts/types/ts/Core/IPropertyValue.d.ts.map +0 -1
  980. package/dist/ts/types/ts/Core/IdentifierSetters.d.ts +0 -7
  981. package/dist/ts/types/ts/Core/IdentifierSetters.d.ts.map +0 -1
  982. package/dist/ts/types/ts/Core/OntologyAnnotation.d.ts +0 -57
  983. package/dist/ts/types/ts/Core/OntologyAnnotation.d.ts.map +0 -1
  984. package/dist/ts/types/ts/Core/OntologySourceReference.d.ts +0 -31
  985. package/dist/ts/types/ts/Core/OntologySourceReference.d.ts.map +0 -1
  986. package/dist/ts/types/ts/Core/Person.d.ts +0 -56
  987. package/dist/ts/types/ts/Core/Person.d.ts.map +0 -1
  988. package/dist/ts/types/ts/Core/Process/ColumnIndex.d.ts +0 -79
  989. package/dist/ts/types/ts/Core/Process/ColumnIndex.d.ts.map +0 -1
  990. package/dist/ts/types/ts/Core/Process/Component.d.ts +0 -65
  991. package/dist/ts/types/ts/Core/Process/Component.d.ts.map +0 -1
  992. package/dist/ts/types/ts/Core/Process/Factor.d.ts +0 -44
  993. package/dist/ts/types/ts/Core/Process/Factor.d.ts.map +0 -1
  994. package/dist/ts/types/ts/Core/Process/FactorValue.d.ts +0 -44
  995. package/dist/ts/types/ts/Core/Process/FactorValue.d.ts.map +0 -1
  996. package/dist/ts/types/ts/Core/Process/Material.d.ts +0 -27
  997. package/dist/ts/types/ts/Core/Process/Material.d.ts.map +0 -1
  998. package/dist/ts/types/ts/Core/Process/MaterialAttribute.d.ts +0 -53
  999. package/dist/ts/types/ts/Core/Process/MaterialAttribute.d.ts.map +0 -1
  1000. package/dist/ts/types/ts/Core/Process/MaterialAttributeValue.d.ts +0 -55
  1001. package/dist/ts/types/ts/Core/Process/MaterialAttributeValue.d.ts.map +0 -1
  1002. package/dist/ts/types/ts/Core/Process/MaterialType.d.ts +0 -22
  1003. package/dist/ts/types/ts/Core/Process/MaterialType.d.ts.map +0 -1
  1004. package/dist/ts/types/ts/Core/Process/Process.d.ts +0 -113
  1005. package/dist/ts/types/ts/Core/Process/Process.d.ts.map +0 -1
  1006. package/dist/ts/types/ts/Core/Process/ProcessInput.d.ts +0 -117
  1007. package/dist/ts/types/ts/Core/Process/ProcessInput.d.ts.map +0 -1
  1008. package/dist/ts/types/ts/Core/Process/ProcessOutput.d.ts +0 -106
  1009. package/dist/ts/types/ts/Core/Process/ProcessOutput.d.ts.map +0 -1
  1010. package/dist/ts/types/ts/Core/Process/ProcessParameterValue.d.ts +0 -40
  1011. package/dist/ts/types/ts/Core/Process/ProcessParameterValue.d.ts.map +0 -1
  1012. package/dist/ts/types/ts/Core/Process/ProcessSequence.d.ts +0 -89
  1013. package/dist/ts/types/ts/Core/Process/ProcessSequence.d.ts.map +0 -1
  1014. package/dist/ts/types/ts/Core/Process/Protocol.d.ts +0 -141
  1015. package/dist/ts/types/ts/Core/Process/Protocol.d.ts.map +0 -1
  1016. package/dist/ts/types/ts/Core/Process/ProtocolParameter.d.ts +0 -32
  1017. package/dist/ts/types/ts/Core/Process/ProtocolParameter.d.ts.map +0 -1
  1018. package/dist/ts/types/ts/Core/Process/Sample.d.ts +0 -31
  1019. package/dist/ts/types/ts/Core/Process/Sample.d.ts.map +0 -1
  1020. package/dist/ts/types/ts/Core/Process/Source.d.ts +0 -24
  1021. package/dist/ts/types/ts/Core/Process/Source.d.ts.map +0 -1
  1022. package/dist/ts/types/ts/Core/Publication.d.ts +0 -36
  1023. package/dist/ts/types/ts/Core/Publication.d.ts.map +0 -1
  1024. package/dist/ts/types/ts/Core/Table/ArcTable.d.ts +0 -137
  1025. package/dist/ts/types/ts/Core/Table/ArcTable.d.ts.map +0 -1
  1026. package/dist/ts/types/ts/Core/Table/ArcTableAux.d.ts +0 -154
  1027. package/dist/ts/types/ts/Core/Table/ArcTableAux.d.ts.map +0 -1
  1028. package/dist/ts/types/ts/Core/Table/ArcTables.d.ts +0 -91
  1029. package/dist/ts/types/ts/Core/Table/ArcTables.d.ts.map +0 -1
  1030. package/dist/ts/types/ts/Core/Table/CompositeCell.d.ts +0 -58
  1031. package/dist/ts/types/ts/Core/Table/CompositeCell.d.ts.map +0 -1
  1032. package/dist/ts/types/ts/Core/Table/CompositeColumn.d.ts +0 -19
  1033. package/dist/ts/types/ts/Core/Table/CompositeColumn.d.ts.map +0 -1
  1034. package/dist/ts/types/ts/Core/Table/CompositeHeader.d.ts +0 -130
  1035. package/dist/ts/types/ts/Core/Table/CompositeHeader.d.ts.map +0 -1
  1036. package/dist/ts/types/ts/Core/Template.d.ts +0 -69
  1037. package/dist/ts/types/ts/Core/Template.d.ts.map +0 -1
  1038. package/dist/ts/types/ts/Core/Templates.d.ts +0 -18
  1039. package/dist/ts/types/ts/Core/Templates.d.ts.map +0 -1
  1040. package/dist/ts/types/ts/Core/URI.d.ts.map +0 -1
  1041. package/dist/ts/types/ts/Core/Value.d.ts +0 -41
  1042. package/dist/ts/types/ts/Core/Value.d.ts.map +0 -1
  1043. package/dist/ts/types/ts/CrossAsync.d.ts +0 -9
  1044. package/dist/ts/types/ts/CrossAsync.d.ts.map +0 -1
  1045. package/dist/ts/types/ts/FileSystem/Commit.d.ts +0 -13
  1046. package/dist/ts/types/ts/FileSystem/Commit.d.ts.map +0 -1
  1047. package/dist/ts/types/ts/FileSystem/DefaultGitattributes.d.ts.map +0 -1
  1048. package/dist/ts/types/ts/FileSystem/DefaultGitignore.d.ts.map +0 -1
  1049. package/dist/ts/types/ts/FileSystem/FileSystem.d.ts +0 -21
  1050. package/dist/ts/types/ts/FileSystem/FileSystem.d.ts.map +0 -1
  1051. package/dist/ts/types/ts/FileSystem/FileSystemTree.d.ts +0 -54
  1052. package/dist/ts/types/ts/FileSystem/FileSystemTree.d.ts.map +0 -1
  1053. package/dist/ts/types/ts/FileSystem/Path.d.ts.map +0 -1
  1054. package/dist/ts/types/ts/Json/Assay.d.ts +0 -19
  1055. package/dist/ts/types/ts/Json/Assay.d.ts.map +0 -1
  1056. package/dist/ts/types/ts/Json/Comment.d.ts +0 -14
  1057. package/dist/ts/types/ts/Json/Comment.d.ts.map +0 -1
  1058. package/dist/ts/types/ts/Json/Data.d.ts +0 -17
  1059. package/dist/ts/types/ts/Json/Data.d.ts.map +0 -1
  1060. package/dist/ts/types/ts/Json/DataFile.d.ts +0 -7
  1061. package/dist/ts/types/ts/Json/DataFile.d.ts.map +0 -1
  1062. package/dist/ts/types/ts/Json/DataMap/DataContext.d.ts +0 -5
  1063. package/dist/ts/types/ts/Json/DataMap/DataContext.d.ts.map +0 -1
  1064. package/dist/ts/types/ts/Json/DataMap/DataMap.d.ts +0 -11
  1065. package/dist/ts/types/ts/Json/DataMap/DataMap.d.ts.map +0 -1
  1066. package/dist/ts/types/ts/Json/Decode.d.ts +0 -18
  1067. package/dist/ts/types/ts/Json/Decode.d.ts.map +0 -1
  1068. package/dist/ts/types/ts/Json/Encode.d.ts +0 -23
  1069. package/dist/ts/types/ts/Json/Encode.d.ts.map +0 -1
  1070. package/dist/ts/types/ts/Json/IDTable.d.ts +0 -5
  1071. package/dist/ts/types/ts/Json/IDTable.d.ts.map +0 -1
  1072. package/dist/ts/types/ts/Json/Investigation.d.ts +0 -20
  1073. package/dist/ts/types/ts/Json/Investigation.d.ts.map +0 -1
  1074. package/dist/ts/types/ts/Json/OntologyAnnotation.d.ts +0 -18
  1075. package/dist/ts/types/ts/Json/OntologyAnnotation.d.ts.map +0 -1
  1076. package/dist/ts/types/ts/Json/OntologySourceReference.d.ts +0 -12
  1077. package/dist/ts/types/ts/Json/OntologySourceReference.d.ts.map +0 -1
  1078. package/dist/ts/types/ts/Json/Person.d.ts +0 -22
  1079. package/dist/ts/types/ts/Json/Person.d.ts.map +0 -1
  1080. package/dist/ts/types/ts/Json/Process/AssayMaterials.d.ts +0 -7
  1081. package/dist/ts/types/ts/Json/Process/AssayMaterials.d.ts.map +0 -1
  1082. package/dist/ts/types/ts/Json/Process/Component.d.ts +0 -11
  1083. package/dist/ts/types/ts/Json/Process/Component.d.ts.map +0 -1
  1084. package/dist/ts/types/ts/Json/Process/Factor.d.ts +0 -8
  1085. package/dist/ts/types/ts/Json/Process/Factor.d.ts.map +0 -1
  1086. package/dist/ts/types/ts/Json/Process/FactorValue.d.ts +0 -11
  1087. package/dist/ts/types/ts/Json/Process/FactorValue.d.ts.map +0 -1
  1088. package/dist/ts/types/ts/Json/Process/Material.d.ts +0 -12
  1089. package/dist/ts/types/ts/Json/Process/Material.d.ts.map +0 -1
  1090. package/dist/ts/types/ts/Json/Process/MaterialAttribute.d.ts +0 -8
  1091. package/dist/ts/types/ts/Json/Process/MaterialAttribute.d.ts.map +0 -1
  1092. package/dist/ts/types/ts/Json/Process/MaterialAttributeValue.d.ts +0 -11
  1093. package/dist/ts/types/ts/Json/Process/MaterialAttributeValue.d.ts.map +0 -1
  1094. package/dist/ts/types/ts/Json/Process/MaterialType.d.ts +0 -7
  1095. package/dist/ts/types/ts/Json/Process/MaterialType.d.ts.map +0 -1
  1096. package/dist/ts/types/ts/Json/Process/Process.d.ts +0 -10
  1097. package/dist/ts/types/ts/Json/Process/Process.d.ts.map +0 -1
  1098. package/dist/ts/types/ts/Json/Process/ProcessInput.d.ts +0 -9
  1099. package/dist/ts/types/ts/Json/Process/ProcessInput.d.ts.map +0 -1
  1100. package/dist/ts/types/ts/Json/Process/ProcessOutput.d.ts +0 -9
  1101. package/dist/ts/types/ts/Json/Process/ProcessOutput.d.ts.map +0 -1
  1102. package/dist/ts/types/ts/Json/Process/ProcessParameterValue.d.ts +0 -11
  1103. package/dist/ts/types/ts/Json/Process/ProcessParameterValue.d.ts.map +0 -1
  1104. package/dist/ts/types/ts/Json/Process/Protocol.d.ts +0 -10
  1105. package/dist/ts/types/ts/Json/Process/Protocol.d.ts.map +0 -1
  1106. package/dist/ts/types/ts/Json/Process/ProtocolParameter.d.ts +0 -8
  1107. package/dist/ts/types/ts/Json/Process/ProtocolParameter.d.ts.map +0 -1
  1108. package/dist/ts/types/ts/Json/Process/Sample.d.ts +0 -15
  1109. package/dist/ts/types/ts/Json/Process/Sample.d.ts.map +0 -1
  1110. package/dist/ts/types/ts/Json/Process/Source.d.ts +0 -12
  1111. package/dist/ts/types/ts/Json/Process/Source.d.ts.map +0 -1
  1112. package/dist/ts/types/ts/Json/Process/StudyMaterials.d.ts +0 -7
  1113. package/dist/ts/types/ts/Json/Process/StudyMaterials.d.ts.map +0 -1
  1114. package/dist/ts/types/ts/Json/Process/Value.d.ts +0 -7
  1115. package/dist/ts/types/ts/Json/Process/Value.d.ts.map +0 -1
  1116. package/dist/ts/types/ts/Json/PropertyValue.d.ts +0 -9
  1117. package/dist/ts/types/ts/Json/PropertyValue.d.ts.map +0 -1
  1118. package/dist/ts/types/ts/Json/Publication.d.ts +0 -14
  1119. package/dist/ts/types/ts/Json/Publication.d.ts.map +0 -1
  1120. package/dist/ts/types/ts/Json/ROCrate/LDContext.d.ts +0 -5
  1121. package/dist/ts/types/ts/Json/ROCrate/LDContext.d.ts.map +0 -1
  1122. package/dist/ts/types/ts/Json/ROCrate/LDGraph.d.ts +0 -5
  1123. package/dist/ts/types/ts/Json/ROCrate/LDGraph.d.ts.map +0 -1
  1124. package/dist/ts/types/ts/Json/ROCrate/LDNode.d.ts +0 -13
  1125. package/dist/ts/types/ts/Json/ROCrate/LDNode.d.ts.map +0 -1
  1126. package/dist/ts/types/ts/Json/ROCrate/LDRef.d.ts +0 -5
  1127. package/dist/ts/types/ts/Json/ROCrate/LDRef.d.ts.map +0 -1
  1128. package/dist/ts/types/ts/Json/ROCrate/LDValue.d.ts +0 -7
  1129. package/dist/ts/types/ts/Json/ROCrate/LDValue.d.ts.map +0 -1
  1130. package/dist/ts/types/ts/Json/StringTable.d.ts +0 -9
  1131. package/dist/ts/types/ts/Json/StringTable.d.ts.map +0 -1
  1132. package/dist/ts/types/ts/Json/Study.d.ts +0 -26
  1133. package/dist/ts/types/ts/Json/Study.d.ts.map +0 -1
  1134. package/dist/ts/types/ts/Json/Table/ArcTable.d.ts +0 -15
  1135. package/dist/ts/types/ts/Json/Table/ArcTable.d.ts.map +0 -1
  1136. package/dist/ts/types/ts/Json/Table/CellTable.d.ts +0 -11
  1137. package/dist/ts/types/ts/Json/Table/CellTable.d.ts.map +0 -1
  1138. package/dist/ts/types/ts/Json/Table/CompositeCell.d.ts +0 -10
  1139. package/dist/ts/types/ts/Json/Table/CompositeCell.d.ts.map +0 -1
  1140. package/dist/ts/types/ts/Json/Table/CompositeHeader.d.ts +0 -5
  1141. package/dist/ts/types/ts/Json/Table/CompositeHeader.d.ts.map +0 -1
  1142. package/dist/ts/types/ts/Json/Table/IOType.d.ts +0 -5
  1143. package/dist/ts/types/ts/Json/Table/IOType.d.ts.map +0 -1
  1144. package/dist/ts/types/ts/Json/Table/OATable.d.ts +0 -10
  1145. package/dist/ts/types/ts/Json/Table/OATable.d.ts.map +0 -1
  1146. package/dist/ts/types/ts/Json/Table/Templates.d.ts +0 -15
  1147. package/dist/ts/types/ts/Json/Table/Templates.d.ts.map +0 -1
  1148. package/dist/ts/types/ts/Json/context/rocrate/isa_assay_context.d.ts +0 -26
  1149. package/dist/ts/types/ts/Json/context/rocrate/isa_assay_context.d.ts.map +0 -1
  1150. package/dist/ts/types/ts/Json/context/rocrate/isa_comment_context.d.ts +0 -16
  1151. package/dist/ts/types/ts/Json/context/rocrate/isa_comment_context.d.ts.map +0 -1
  1152. package/dist/ts/types/ts/Json/context/rocrate/isa_data_context.d.ts +0 -18
  1153. package/dist/ts/types/ts/Json/context/rocrate/isa_data_context.d.ts.map +0 -1
  1154. package/dist/ts/types/ts/Json/context/rocrate/isa_investigation_context.d.ts +0 -26
  1155. package/dist/ts/types/ts/Json/context/rocrate/isa_investigation_context.d.ts.map +0 -1
  1156. package/dist/ts/types/ts/Json/context/rocrate/isa_material_context.d.ts +0 -19
  1157. package/dist/ts/types/ts/Json/context/rocrate/isa_material_context.d.ts.map +0 -1
  1158. package/dist/ts/types/ts/Json/context/rocrate/isa_ontology_annotation_context.d.ts +0 -17
  1159. package/dist/ts/types/ts/Json/context/rocrate/isa_ontology_annotation_context.d.ts.map +0 -1
  1160. package/dist/ts/types/ts/Json/context/rocrate/isa_ontology_source_reference_context.d.ts +0 -19
  1161. package/dist/ts/types/ts/Json/context/rocrate/isa_ontology_source_reference_context.d.ts.map +0 -1
  1162. package/dist/ts/types/ts/Json/context/rocrate/isa_organization_context.d.ts +0 -15
  1163. package/dist/ts/types/ts/Json/context/rocrate/isa_organization_context.d.ts.map +0 -1
  1164. package/dist/ts/types/ts/Json/context/rocrate/isa_person_context.d.ts +0 -25
  1165. package/dist/ts/types/ts/Json/context/rocrate/isa_person_context.d.ts.map +0 -1
  1166. package/dist/ts/types/ts/Json/context/rocrate/isa_process_context.d.ts +0 -23
  1167. package/dist/ts/types/ts/Json/context/rocrate/isa_process_context.d.ts.map +0 -1
  1168. package/dist/ts/types/ts/Json/context/rocrate/isa_protocol_context.d.ts +0 -22
  1169. package/dist/ts/types/ts/Json/context/rocrate/isa_protocol_context.d.ts.map +0 -1
  1170. package/dist/ts/types/ts/Json/context/rocrate/isa_publication_context.d.ts +0 -19
  1171. package/dist/ts/types/ts/Json/context/rocrate/isa_publication_context.d.ts.map +0 -1
  1172. package/dist/ts/types/ts/Json/context/rocrate/isa_sample_context.d.ts +0 -18
  1173. package/dist/ts/types/ts/Json/context/rocrate/isa_sample_context.d.ts.map +0 -1
  1174. package/dist/ts/types/ts/Json/context/rocrate/isa_source_context.d.ts +0 -18
  1175. package/dist/ts/types/ts/Json/context/rocrate/isa_source_context.d.ts.map +0 -1
  1176. package/dist/ts/types/ts/Json/context/rocrate/isa_study_context.d.ts +0 -34
  1177. package/dist/ts/types/ts/Json/context/rocrate/isa_study_context.d.ts.map +0 -1
  1178. package/dist/ts/types/ts/Json/context/rocrate/property_value_context.d.ts +0 -3
  1179. package/dist/ts/types/ts/Json/context/rocrate/property_value_context.d.ts.map +0 -1
  1180. package/dist/ts/types/ts/Json/context/rocrate/rocrate_context.d.ts +0 -16
  1181. package/dist/ts/types/ts/Json/context/rocrate/rocrate_context.d.ts.map +0 -1
  1182. package/dist/ts/types/ts/Json.d.ts +0 -90
  1183. package/dist/ts/types/ts/Json.d.ts.map +0 -1
  1184. package/dist/ts/types/ts/JsonIO/Assay.d.ts +0 -19
  1185. package/dist/ts/types/ts/JsonIO/Assay.d.ts.map +0 -1
  1186. package/dist/ts/types/ts/JsonIO/Investigation.d.ts +0 -19
  1187. package/dist/ts/types/ts/JsonIO/Investigation.d.ts.map +0 -1
  1188. package/dist/ts/types/ts/JsonIO/LDObject.d.ts +0 -29
  1189. package/dist/ts/types/ts/JsonIO/LDObject.d.ts.map +0 -1
  1190. package/dist/ts/types/ts/JsonIO/OntologyAnnotation.d.ts +0 -16
  1191. package/dist/ts/types/ts/JsonIO/OntologyAnnotation.d.ts.map +0 -1
  1192. package/dist/ts/types/ts/JsonIO/Study.d.ts +0 -20
  1193. package/dist/ts/types/ts/JsonIO/Study.d.ts.map +0 -1
  1194. package/dist/ts/types/ts/JsonIO/Table/Compression.d.ts +0 -8
  1195. package/dist/ts/types/ts/JsonIO/Table/Compression.d.ts.map +0 -1
  1196. package/dist/ts/types/ts/JsonIO/Table/Templates.d.ts +0 -15
  1197. package/dist/ts/types/ts/JsonIO/Table/Templates.d.ts.map +0 -1
  1198. package/dist/ts/types/ts/ROCrate/Generic/Comment.d.ts +0 -21
  1199. package/dist/ts/types/ts/ROCrate/Generic/Comment.d.ts.map +0 -1
  1200. package/dist/ts/types/ts/ROCrate/Generic/Dataset.d.ts +0 -92
  1201. package/dist/ts/types/ts/ROCrate/Generic/Dataset.d.ts.map +0 -1
  1202. package/dist/ts/types/ts/ROCrate/Generic/DefinedTerm.d.ts +0 -21
  1203. package/dist/ts/types/ts/ROCrate/Generic/DefinedTerm.d.ts.map +0 -1
  1204. package/dist/ts/types/ts/ROCrate/Generic/File.d.ts +0 -35
  1205. package/dist/ts/types/ts/ROCrate/Generic/File.d.ts.map +0 -1
  1206. package/dist/ts/types/ts/ROCrate/Generic/LabProcess.d.ts +0 -43
  1207. package/dist/ts/types/ts/ROCrate/Generic/LabProcess.d.ts.map +0 -1
  1208. package/dist/ts/types/ts/ROCrate/Generic/LabProtocol.d.ts +0 -44
  1209. package/dist/ts/types/ts/ROCrate/Generic/LabProtocol.d.ts.map +0 -1
  1210. package/dist/ts/types/ts/ROCrate/Generic/Organization.d.ts +0 -17
  1211. package/dist/ts/types/ts/ROCrate/Generic/Organization.d.ts.map +0 -1
  1212. package/dist/ts/types/ts/ROCrate/Generic/Person.d.ts +0 -51
  1213. package/dist/ts/types/ts/ROCrate/Generic/Person.d.ts.map +0 -1
  1214. package/dist/ts/types/ts/ROCrate/Generic/PostalAddress.d.ts +0 -25
  1215. package/dist/ts/types/ts/ROCrate/Generic/PostalAddress.d.ts.map +0 -1
  1216. package/dist/ts/types/ts/ROCrate/Generic/PropertyValue.d.ts +0 -73
  1217. package/dist/ts/types/ts/ROCrate/Generic/PropertyValue.d.ts.map +0 -1
  1218. package/dist/ts/types/ts/ROCrate/Generic/Sample.d.ts +0 -30
  1219. package/dist/ts/types/ts/ROCrate/Generic/Sample.d.ts.map +0 -1
  1220. package/dist/ts/types/ts/ROCrate/Generic/ScholarlyArticle.d.ts +0 -34
  1221. package/dist/ts/types/ts/ROCrate/Generic/ScholarlyArticle.d.ts.map +0 -1
  1222. package/dist/ts/types/ts/ROCrate/Helper.d.ts.map +0 -1
  1223. package/dist/ts/types/ts/ROCrate/LDContext.d.ts +0 -43
  1224. package/dist/ts/types/ts/ROCrate/LDContext.d.ts.map +0 -1
  1225. package/dist/ts/types/ts/ROCrate/LDObject.d.ts +0 -97
  1226. package/dist/ts/types/ts/ROCrate/LDObject.d.ts.map +0 -1
  1227. package/dist/ts/types/ts/ROCrate/ROCrateContext.d.ts +0 -7
  1228. package/dist/ts/types/ts/ROCrate/ROCrateContext.d.ts.map +0 -1
  1229. package/dist/ts/types/ts/ROCrateIO.d.ts +0 -15
  1230. package/dist/ts/types/ts/ROCrateIO.d.ts.map +0 -1
  1231. package/dist/ts/types/ts/Spreadsheet/AnnotationTable/ArcTable.d.ts +0 -40
  1232. package/dist/ts/types/ts/Spreadsheet/AnnotationTable/ArcTable.d.ts.map +0 -1
  1233. package/dist/ts/types/ts/Spreadsheet/AnnotationTable/CompositeCell.d.ts +0 -9
  1234. package/dist/ts/types/ts/Spreadsheet/AnnotationTable/CompositeCell.d.ts.map +0 -1
  1235. package/dist/ts/types/ts/Spreadsheet/AnnotationTable/CompositeColumn.d.ts +0 -24
  1236. package/dist/ts/types/ts/Spreadsheet/AnnotationTable/CompositeColumn.d.ts.map +0 -1
  1237. package/dist/ts/types/ts/Spreadsheet/AnnotationTable/CompositeHeader.d.ts +0 -22
  1238. package/dist/ts/types/ts/Spreadsheet/AnnotationTable/CompositeHeader.d.ts.map +0 -1
  1239. package/dist/ts/types/ts/Spreadsheet/ArcAssay.d.ts +0 -31
  1240. package/dist/ts/types/ts/Spreadsheet/ArcAssay.d.ts.map +0 -1
  1241. package/dist/ts/types/ts/Spreadsheet/ArcInvestigation.d.ts +0 -42
  1242. package/dist/ts/types/ts/Spreadsheet/ArcInvestigation.d.ts.map +0 -1
  1243. package/dist/ts/types/ts/Spreadsheet/ArcRun.d.ts +0 -27
  1244. package/dist/ts/types/ts/Spreadsheet/ArcRun.d.ts.map +0 -1
  1245. package/dist/ts/types/ts/Spreadsheet/ArcStudy.d.ts +0 -26
  1246. package/dist/ts/types/ts/Spreadsheet/ArcStudy.d.ts.map +0 -1
  1247. package/dist/ts/types/ts/Spreadsheet/ArcWorkflow.d.ts +0 -27
  1248. package/dist/ts/types/ts/Spreadsheet/ArcWorkflow.d.ts.map +0 -1
  1249. package/dist/ts/types/ts/Spreadsheet/CollectionAux.d.ts +0 -23
  1250. package/dist/ts/types/ts/Spreadsheet/CollectionAux.d.ts.map +0 -1
  1251. package/dist/ts/types/ts/Spreadsheet/DataMap.d.ts +0 -8
  1252. package/dist/ts/types/ts/Spreadsheet/DataMap.d.ts.map +0 -1
  1253. package/dist/ts/types/ts/Spreadsheet/DataMapTable/DataMapColumn.d.ts +0 -7
  1254. package/dist/ts/types/ts/Spreadsheet/DataMapTable/DataMapColumn.d.ts.map +0 -1
  1255. package/dist/ts/types/ts/Spreadsheet/DataMapTable/DataMapHeader.d.ts +0 -23
  1256. package/dist/ts/types/ts/Spreadsheet/DataMapTable/DataMapHeader.d.ts.map +0 -1
  1257. package/dist/ts/types/ts/Spreadsheet/DataMapTable/DataMapTable.d.ts +0 -23
  1258. package/dist/ts/types/ts/Spreadsheet/DataMapTable/DataMapTable.d.ts.map +0 -1
  1259. package/dist/ts/types/ts/Spreadsheet/Metadata/Assays.d.ts +0 -14
  1260. package/dist/ts/types/ts/Spreadsheet/Metadata/Assays.d.ts.map +0 -1
  1261. package/dist/ts/types/ts/Spreadsheet/Metadata/Comment.d.ts +0 -14
  1262. package/dist/ts/types/ts/Spreadsheet/Metadata/Comment.d.ts.map +0 -1
  1263. package/dist/ts/types/ts/Spreadsheet/Metadata/Contacts.d.ts +0 -25
  1264. package/dist/ts/types/ts/Spreadsheet/Metadata/Contacts.d.ts.map +0 -1
  1265. package/dist/ts/types/ts/Spreadsheet/Metadata/Conversions.d.ts +0 -60
  1266. package/dist/ts/types/ts/Spreadsheet/Metadata/Conversions.d.ts.map +0 -1
  1267. package/dist/ts/types/ts/Spreadsheet/Metadata/DesignDescriptors.d.ts +0 -16
  1268. package/dist/ts/types/ts/Spreadsheet/Metadata/DesignDescriptors.d.ts.map +0 -1
  1269. package/dist/ts/types/ts/Spreadsheet/Metadata/Factors.d.ts +0 -18
  1270. package/dist/ts/types/ts/Spreadsheet/Metadata/Factors.d.ts.map +0 -1
  1271. package/dist/ts/types/ts/Spreadsheet/Metadata/OntologyAnnotation.d.ts +0 -12
  1272. package/dist/ts/types/ts/Spreadsheet/Metadata/OntologyAnnotation.d.ts.map +0 -1
  1273. package/dist/ts/types/ts/Spreadsheet/Metadata/OntologySourceReference.d.ts +0 -18
  1274. package/dist/ts/types/ts/Spreadsheet/Metadata/OntologySourceReference.d.ts.map +0 -1
  1275. package/dist/ts/types/ts/Spreadsheet/Metadata/Protocols.d.ts +0 -28
  1276. package/dist/ts/types/ts/Spreadsheet/Metadata/Protocols.d.ts.map +0 -1
  1277. package/dist/ts/types/ts/Spreadsheet/Metadata/Publication.d.ts +0 -21
  1278. package/dist/ts/types/ts/Spreadsheet/Metadata/Publication.d.ts.map +0 -1
  1279. package/dist/ts/types/ts/Spreadsheet/Metadata/Run.d.ts +0 -14
  1280. package/dist/ts/types/ts/Spreadsheet/Metadata/Run.d.ts.map +0 -1
  1281. package/dist/ts/types/ts/Spreadsheet/Metadata/SparseTable.d.ts +0 -37
  1282. package/dist/ts/types/ts/Spreadsheet/Metadata/SparseTable.d.ts.map +0 -1
  1283. package/dist/ts/types/ts/Spreadsheet/Metadata/Study.d.ts +0 -38
  1284. package/dist/ts/types/ts/Spreadsheet/Metadata/Study.d.ts.map +0 -1
  1285. package/dist/ts/types/ts/Spreadsheet/Metadata/Workflow.d.ts +0 -31
  1286. package/dist/ts/types/ts/Spreadsheet/Metadata/Workflow.d.ts.map +0 -1
  1287. package/dist/ts/types/ts/Template.Web.d.ts +0 -11
  1288. package/dist/ts/types/ts/Template.Web.d.ts.map +0 -1
  1289. package/dist/ts/types/ts/ValidationPackages/ValidationPackage.d.ts +0 -21
  1290. package/dist/ts/types/ts/ValidationPackages/ValidationPackage.d.ts.map +0 -1
  1291. package/dist/ts/types/ts/ValidationPackages/ValidationPackagesConfig.d.ts +0 -23
  1292. package/dist/ts/types/ts/ValidationPackages/ValidationPackagesConfig.d.ts.map +0 -1
  1293. package/dist/ts/types/ts/WebRequest/WebRequest.Node.d.ts +0 -4
  1294. package/dist/ts/types/ts/WebRequest/WebRequest.Node.d.ts.map +0 -1
  1295. package/dist/ts/types/ts/WebRequest/WebRequest.d.ts +0 -4
  1296. package/dist/ts/types/ts/WebRequest/WebRequest.d.ts.map +0 -1
  1297. package/dist/ts/types/ts/Xlsx.d.ts +0 -50
  1298. package/dist/ts/types/ts/Xlsx.d.ts.map +0 -1
  1299. package/dist/ts/types/ts/Yaml/Encode.d.ts +0 -5
  1300. package/dist/ts/types/ts/Yaml/Encode.d.ts.map +0 -1
  1301. package/dist/ts/types/ts/Yaml/ValidationPackage.d.ts +0 -10
  1302. package/dist/ts/types/ts/Yaml/ValidationPackage.d.ts.map +0 -1
  1303. package/dist/ts/types/ts/Yaml/ValidationPackagesConfig.d.ts +0 -10
  1304. package/dist/ts/types/ts/Yaml/ValidationPackagesConfig.d.ts.map +0 -1
  1305. package/dist/ts/types/ts/fable_modules/DynamicObj.7.0.1/DynamicObj.fs.d.ts +0 -69
  1306. package/dist/ts/types/ts/fable_modules/DynamicObj.7.0.1/DynamicObj.fs.d.ts.map +0 -1
  1307. package/dist/ts/types/ts/fable_modules/DynamicObj.7.0.1/FableJS.fs.d.ts +0 -25
  1308. package/dist/ts/types/ts/fable_modules/DynamicObj.7.0.1/FableJS.fs.d.ts.map +0 -1
  1309. package/dist/ts/types/ts/fable_modules/DynamicObj.7.0.1/HashCodes.fs.d.ts +0 -11
  1310. package/dist/ts/types/ts/fable_modules/DynamicObj.7.0.1/HashCodes.fs.d.ts.map +0 -1
  1311. package/dist/ts/types/ts/fable_modules/DynamicObj.7.0.1/PropertyHelper.fs.d.ts +0 -15
  1312. package/dist/ts/types/ts/fable_modules/DynamicObj.7.0.1/PropertyHelper.fs.d.ts.map +0 -1
  1313. package/dist/ts/types/ts/fable_modules/DynamicObj.7.0.1/ReflectionUtils.fs.d.ts +0 -15
  1314. package/dist/ts/types/ts/fable_modules/DynamicObj.7.0.1/ReflectionUtils.fs.d.ts.map +0 -1
  1315. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Cell.fs.d.ts +0 -34
  1316. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Cell.fs.d.ts.map +0 -1
  1317. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Column.fs.d.ts +0 -14
  1318. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Column.fs.d.ts.map +0 -1
  1319. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/ExcelJs.fs.d.ts +0 -4
  1320. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/ExcelJs.fs.d.ts.map +0 -1
  1321. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Row.fs.d.ts +0 -30
  1322. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Row.fs.d.ts.map +0 -1
  1323. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Unions.fs.d.ts +0 -49
  1324. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Unions.fs.d.ts.map +0 -1
  1325. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Workbook.fs.d.ts +0 -35
  1326. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Workbook.fs.d.ts.map +0 -1
  1327. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Worksheet.fs.d.ts +0 -123
  1328. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Worksheet.fs.d.ts.map +0 -1
  1329. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Xlsx.fs.d.ts +0 -27
  1330. package/dist/ts/types/ts/fable_modules/Fable.Exceljs.1.6.0/Xlsx.fs.d.ts.map +0 -1
  1331. package/dist/ts/types/ts/fable_modules/Fable.Fetch.2.6.0/Fetch.fs.d.ts +0 -253
  1332. package/dist/ts/types/ts/fable_modules/Fable.Fetch.2.6.0/Fetch.fs.d.ts.map +0 -1
  1333. package/dist/ts/types/ts/fable_modules/Fable.Promise.3.2.0/Promise.fs.d.ts +0 -112
  1334. package/dist/ts/types/ts/fable_modules/Fable.Promise.3.2.0/Promise.fs.d.ts.map +0 -1
  1335. package/dist/ts/types/ts/fable_modules/Fable.Promise.3.2.0/PromiseImpl.fs.d.ts +0 -8
  1336. package/dist/ts/types/ts/fable_modules/Fable.Promise.3.2.0/PromiseImpl.fs.d.ts.map +0 -1
  1337. package/dist/ts/types/ts/fable_modules/Fable.SimpleHttp.3.5.0/Http.fs.d.ts +0 -123
  1338. package/dist/ts/types/ts/fable_modules/Fable.SimpleHttp.3.5.0/Http.fs.d.ts.map +0 -1
  1339. package/dist/ts/types/ts/fable_modules/Fable.SimpleHttp.3.5.0/Types.fs.d.ts +0 -113
  1340. package/dist/ts/types/ts/fable_modules/Fable.SimpleHttp.3.5.0/Types.fs.d.ts.map +0 -1
  1341. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Cells/FsCell.fs.d.ts +0 -91
  1342. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Cells/FsCell.fs.d.ts.map +0 -1
  1343. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Cells/FsCellsCollection.fs.d.ts +0 -181
  1344. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Cells/FsCellsCollection.fs.d.ts.map +0 -1
  1345. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/CellBuilder.fs.d.ts +0 -36
  1346. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/CellBuilder.fs.d.ts.map +0 -1
  1347. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/Expression.fs.d.ts +0 -23
  1348. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/Expression.fs.d.ts.map +0 -1
  1349. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/RowBuilder.fs.d.ts +0 -21
  1350. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/RowBuilder.fs.d.ts.map +0 -1
  1351. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/Types.fs.d.ts +0 -157
  1352. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/DSL/Types.fs.d.ts.map +0 -1
  1353. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/FsAddress.fs.d.ts +0 -97
  1354. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/FsAddress.fs.d.ts.map +0 -1
  1355. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/FsColumn.fs.d.ts +0 -37
  1356. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/FsColumn.fs.d.ts.map +0 -1
  1357. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/FsRow.fs.d.ts +0 -39
  1358. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/FsRow.fs.d.ts.map +0 -1
  1359. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/FsWorkbook.fs.d.ts +0 -36
  1360. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/FsWorkbook.fs.d.ts.map +0 -1
  1361. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/FsWorksheet.fs.d.ts +0 -88
  1362. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/FsWorksheet.fs.d.ts.map +0 -1
  1363. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Cell.fs.d.ts +0 -10
  1364. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Cell.fs.d.ts.map +0 -1
  1365. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Column.fs.d.ts +0 -9
  1366. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Column.fs.d.ts.map +0 -1
  1367. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Row.fs.d.ts +0 -9
  1368. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Row.fs.d.ts.map +0 -1
  1369. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Table.fs.d.ts +0 -5
  1370. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Table.fs.d.ts.map +0 -1
  1371. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Value.fs.d.ts +0 -6
  1372. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Value.fs.d.ts.map +0 -1
  1373. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Workbook.fs.d.ts +0 -7
  1374. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Workbook.fs.d.ts.map +0 -1
  1375. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Worksheet.fs.d.ts +0 -7
  1376. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Json/Worksheet.fs.d.ts.map +0 -1
  1377. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRange.fs.d.ts +0 -15
  1378. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRange.fs.d.ts.map +0 -1
  1379. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeAddress.fs.d.ts +0 -94
  1380. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeAddress.fs.d.ts.map +0 -1
  1381. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeBase.fs.d.ts +0 -33
  1382. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeBase.fs.d.ts.map +0 -1
  1383. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeColumn.fs.d.ts +0 -31
  1384. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeColumn.fs.d.ts.map +0 -1
  1385. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeRow.fs.d.ts +0 -17
  1386. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Ranges/FsRangeRow.fs.d.ts.map +0 -1
  1387. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Tables/FsTable.fs.d.ts +0 -71
  1388. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Tables/FsTable.fs.d.ts.map +0 -1
  1389. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Tables/FsTableField.fs.d.ts +0 -89
  1390. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.6.3.1/Tables/FsTableField.fs.d.ts.map +0 -1
  1391. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Cell.fs.d.ts +0 -10
  1392. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Cell.fs.d.ts.map +0 -1
  1393. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/FsExtensions.fs.d.ts +0 -19
  1394. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/FsExtensions.fs.d.ts.map +0 -1
  1395. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Json.fs.d.ts +0 -15
  1396. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Json.fs.d.ts.map +0 -1
  1397. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Table.fs.d.ts +0 -6
  1398. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Table.fs.d.ts.map +0 -1
  1399. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Workbook.fs.d.ts +0 -5
  1400. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Workbook.fs.d.ts.map +0 -1
  1401. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Worksheet.fs.d.ts +0 -7
  1402. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Worksheet.fs.d.ts.map +0 -1
  1403. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Xlsx.fs.d.ts +0 -20
  1404. package/dist/ts/types/ts/fable_modules/FsSpreadsheet.Js.6.3.1/Xlsx.fs.d.ts.map +0 -1
  1405. package/dist/ts/types/ts/fable_modules/Thoth.Json.Core.0.4.0/Decode.fs.d.ts +0 -105
  1406. package/dist/ts/types/ts/fable_modules/Thoth.Json.Core.0.4.0/Decode.fs.d.ts.map +0 -1
  1407. package/dist/ts/types/ts/fable_modules/Thoth.Json.Core.0.4.0/Encode.fs.d.ts +0 -26
  1408. package/dist/ts/types/ts/fable_modules/Thoth.Json.Core.0.4.0/Encode.fs.d.ts.map +0 -1
  1409. package/dist/ts/types/ts/fable_modules/Thoth.Json.Core.0.4.0/Types.fs.d.ts +0 -99
  1410. package/dist/ts/types/ts/fable_modules/Thoth.Json.Core.0.4.0/Types.fs.d.ts.map +0 -1
  1411. package/dist/ts/types/ts/fable_modules/Thoth.Json.JavaScript.0.3.0/Decode.fs.d.ts +0 -7
  1412. package/dist/ts/types/ts/fable_modules/Thoth.Json.JavaScript.0.3.0/Decode.fs.d.ts.map +0 -1
  1413. package/dist/ts/types/ts/fable_modules/Thoth.Json.JavaScript.0.3.0/Encode.fs.d.ts +0 -5
  1414. package/dist/ts/types/ts/fable_modules/Thoth.Json.JavaScript.0.3.0/Encode.fs.d.ts.map +0 -1
  1415. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Decode.fs.d.ts +0 -64
  1416. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Decode.fs.d.ts.map +0 -1
  1417. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Encode.fs.d.ts +0 -24
  1418. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Encode.fs.d.ts.map +0 -1
  1419. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Interop/JsInterop.fs.d.ts +0 -3
  1420. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Interop/JsInterop.fs.d.ts.map +0 -1
  1421. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Persil.fs.d.ts +0 -12
  1422. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Persil.fs.d.ts.map +0 -1
  1423. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Preprocessing.fs.d.ts +0 -10
  1424. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Preprocessing.fs.d.ts.map +0 -1
  1425. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Reader.fs.d.ts +0 -6
  1426. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Reader.fs.d.ts.map +0 -1
  1427. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Regex.fs.d.ts +0 -10
  1428. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Regex.fs.d.ts.map +0 -1
  1429. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/RegexActivePatterns.fs.d.ts +0 -46
  1430. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/RegexActivePatterns.fs.d.ts.map +0 -1
  1431. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Writer.fs.d.ts +0 -12
  1432. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/Writer.fs.d.ts.map +0 -1
  1433. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/YAMLiciousTypes.fs.d.ts +0 -70
  1434. package/dist/ts/types/ts/fable_modules/YAMLicious.0.0.3/YAMLiciousTypes.fs.d.ts.map +0 -1
  1435. /package/dist/ts/{types/ts → ts}/Core/URI.d.ts +0 -0
  1436. /package/dist/ts/{types/ts → ts}/FileSystem/DefaultGitattributes.d.ts +0 -0
  1437. /package/dist/ts/{types/ts → ts}/FileSystem/DefaultGitignore.d.ts +0 -0
  1438. /package/dist/ts/{types/ts → ts}/FileSystem/Path.d.ts +0 -0
  1439. /package/dist/ts/{types/ts → ts}/ROCrate/Helper.d.ts +0 -0
@@ -1,1145 +0,0 @@
1
- import { toFail, printf, toText } from "@fable-org/fable-library-js/String.js";
2
- import { Comment$ } from "./Comment.js";
3
- import { zip as zip_1, fold, empty as empty_1, singleton as singleton_1, append, delay, map as map_1, filter, toList, indexed, tryPick, choose } from "@fable-org/fable-library-js/Seq.js";
4
- import { unwrap, value as value_10, map, defaultArg } from "@fable-org/fable-library-js/Option.js";
5
- import { ResizeArray_singleton, Option_fromValueWithDefault, ResizeArray_filter } from "./Helper/Collections.js";
6
- import { OntologyAnnotation } from "./OntologyAnnotation.js";
7
- import { Value_Name, Value as Value_2, Value_Ontology } from "./Value.js";
8
- import { CompositeCell_FreeText, CompositeCell_Unitized, CompositeCell_Term } from "./Table/CompositeCell.js";
9
- import { Component_create_Z2F0B38C7 } from "./Process/Component.js";
10
- import { CompositeHeader_Comment, CompositeHeader_ProtocolVersion, CompositeHeader_ProtocolUri, CompositeHeader_ProtocolDescription, CompositeHeader_ProtocolType, CompositeHeader_ProtocolREF, CompositeHeader_Output, IOType_Source, IOType_Data, IOType_Material, CompositeHeader_Input, IOType_Sample, CompositeHeader_Characteristic, CompositeHeader_Factor, CompositeHeader_Parameter, CompositeHeader_Component } from "./Table/CompositeHeader.js";
11
- import { ProtocolParameter } from "./Process/ProtocolParameter.js";
12
- import { ProcessParameterValue } from "./Process/ProcessParameterValue.js";
13
- import { FactorValue_create_30BDC49 } from "./Process/FactorValue.js";
14
- import { Factor } from "./Process/Factor.js";
15
- import { toString } from "@fable-org/fable-library-js/Types.js";
16
- import { MaterialAttributeValue_create_ZE1D108D } from "./Process/MaterialAttributeValue.js";
17
- import { MaterialAttribute_create_A220A8A } from "./Process/MaterialAttribute.js";
18
- import { ProcessInput_getCharacteristicValues_5B3D5BA9, ProcessInput__isMaterial, ProcessInput__isData, ProcessInput_setCharacteristicValues, ProcessInput__get_Name, ProcessInput__isSource, ProcessInput__isSample, ProcessInput_Source, ProcessInput_createSource_Z5E00540E, ProcessInput_createRawData_Z721C83C5, ProcessInput_createMaterial_4452CB4C, ProcessInput_createSample_Z598187B7 } from "./Process/ProcessInput.js";
19
- import { ProcessOutput_getFactorValues_Z42C11600, ProcessOutput__isMaterial, ProcessOutput__isData, ProcessOutput_setFactorValues, ProcessOutput__get_Name, ProcessOutput__isSample, ProcessOutput_Sample, ProcessOutput_createRawData_Z721C83C5, ProcessOutput_createMaterial_4452CB4C, ProcessOutput_createSample_Z598187B7 } from "./Process/ProcessOutput.js";
20
- import { safeHash, equals, disposeSafe, getEnumerator, comparePrimitives, arrayHash, equalArrays, stringHash, int32ToString } from "@fable-org/fable-library-js/Util.js";
21
- import { ActivePatterns_$007CRegex$007C_$007C } from "./Helper/Regex.js";
22
- import { ARCtrl_Process_Component__Component_TryGetColumnIndex, ARCtrl_Process_ProtocolParameter__ProtocolParameter_TryGetColumnIndex, tryGetFactorColumnIndex, tryGetCharacteristicColumnIndex, tryGetComponentIndex, tryGetParameterColumnIndex, ARCtrl_OntologyAnnotation__OntologyAnnotation_setColumnIndex_Static, ARCtrl_OntologyAnnotation__OntologyAnnotation_SetColumnIndex_Z524259A4 } from "./Process/ColumnIndex.js";
23
- import { Unchecked_alignByHeaders, getEmptyCellForHeader, Unchecked_tryGetCellAt } from "./Table/ArcTableAux.js";
24
- import { ArcTable } from "./Table/ArcTable.js";
25
- import { initialize, zip, append as append_1, sortBy, head, tryPick as tryPick_1, collect, mapIndexed, item, map as map_2, empty, length, ofArray, isEmpty, singleton, choose as choose_1 } from "@fable-org/fable-library-js/List.js";
26
- import { Source_create_Z5CA08497 } from "./Process/Source.js";
27
- import { Sample_create_62424AD2 } from "./Process/Sample.js";
28
- import { Process_create_Z7C1F7FA9, Process_decomposeName_Z721C83C5, Process_make, Process_composeName } from "./Process/Process.js";
29
- import { Protocol_create_Z414665E7, Protocol_addComponent, Protocol_addParameter, Protocol_setName, Protocol_setDescription, Protocol_setUri, Protocol_setVersion, Protocol_setProtocolType, Protocol_make } from "./Process/Protocol.js";
30
- import { List_distinct, List_groupBy } from "@fable-org/fable-library-js/Seq2.js";
31
- import { createMissingIdentifier } from "./Helper/Identifier.js";
32
- import { boxHashSeq, boxHashOption } from "./Helper/HashCodes.js";
33
- import { rangeDouble } from "@fable-org/fable-library-js/Range.js";
34
- import { ArcTables } from "./Table/ArcTables.js";
35
- export const Person_orcidKey = "ORCID";
36
- export const Person_AssayIdentifierPrefix = "performer (ARC:00000168)";
37
- export const Person_createAssayIdentifierKey = (() => {
38
- const clo_1 = toText(printf("%s %s"))(Person_AssayIdentifierPrefix);
39
- return clo_1;
40
- })();
41
- export function Person_setSourceAssayComment(person, assayIdentifier) {
42
- const person_1 = person.Copy();
43
- const comment = new Comment$(Person_createAssayIdentifierKey(assayIdentifier), assayIdentifier);
44
- void (person_1.Comments.push(comment));
45
- return person_1;
46
- }
47
- /**
48
- * This functions helps encoding/decoding ISA-JSON. It returns a sequence of ArcAssay-Identifiers.
49
- */
50
- export function Person_getSourceAssayIdentifiersFromComments(person) {
51
- return choose((c) => {
52
- if (defaultArg(map((n) => n.startsWith(Person_AssayIdentifierPrefix), c.Name), false)) {
53
- return c.Value;
54
- }
55
- else {
56
- return undefined;
57
- }
58
- }, person.Comments);
59
- }
60
- export function Person_removeSourceAssayComments(person) {
61
- return ResizeArray_filter((c) => {
62
- if (c.Name != null) {
63
- return !value_10(c.Name).startsWith(Person_AssayIdentifierPrefix);
64
- }
65
- else {
66
- return false;
67
- }
68
- }, person.Comments);
69
- }
70
- export function Person_setOrcidFromComments(person) {
71
- const person_1 = person.Copy();
72
- const isOrcidComment = (c) => {
73
- if (c.Name != null) {
74
- return value_10(c.Name).toLocaleUpperCase().endsWith(Person_orcidKey);
75
- }
76
- else {
77
- return false;
78
- }
79
- };
80
- const patternInput = [tryPick((c_1) => {
81
- if (isOrcidComment(c_1)) {
82
- return c_1.Value;
83
- }
84
- else {
85
- return undefined;
86
- }
87
- }, person_1.Comments), ResizeArray_filter((arg) => !isOrcidComment(arg), person_1.Comments)];
88
- person_1.ORCID = patternInput[0];
89
- person_1.Comments = patternInput[1];
90
- return person_1;
91
- }
92
- export function Person_setCommentFromORCID(person) {
93
- const person_1 = person.Copy();
94
- const matchValue = person_1.ORCID;
95
- if (matchValue == null) {
96
- }
97
- else {
98
- const orcid = value_10(matchValue);
99
- const comment = Comment$.create(Person_orcidKey, orcid);
100
- void (person_1.Comments.push(comment));
101
- }
102
- return person_1;
103
- }
104
- /**
105
- * Convert a CompositeCell to a ISA Value and Unit tuple.
106
- */
107
- export function JsonTypes_valueOfCell(value) {
108
- let term;
109
- switch (value.tag) {
110
- case /* Term */ 0:
111
- if ((term = value.fields[0], term.isEmpty())) {
112
- const term_1 = value.fields[0];
113
- return [undefined, undefined];
114
- }
115
- else {
116
- const term_2 = value.fields[0];
117
- return [Value_Ontology(term_2), undefined];
118
- }
119
- case /* Unitized */ 2: {
120
- const text_1 = value.fields[0];
121
- const unit = value.fields[1];
122
- return [(text_1 === "") ? undefined : Value_2.fromString(text_1), unit.isEmpty() ? undefined : unit];
123
- }
124
- case /* Data */ 3: {
125
- const data = value.fields[0];
126
- throw new Error("Data cell should not be parsed to isa value");
127
- }
128
- default:
129
- if (value.fields[0] === "") {
130
- return [undefined, undefined];
131
- }
132
- else {
133
- const text = value.fields[0];
134
- return [Value_2.fromString(text), undefined];
135
- }
136
- }
137
- }
138
- /**
139
- * Convert a CompositeHeader and Cell tuple to a ISA Component
140
- */
141
- export function JsonTypes_composeComponent(header, value) {
142
- const patternInput = JsonTypes_valueOfCell(value);
143
- return Component_create_Z2F0B38C7(unwrap(patternInput[0]), unwrap(patternInput[1]), header.ToTerm());
144
- }
145
- /**
146
- * Convert a CompositeHeader and Cell tuple to a ISA ProcessParameterValue
147
- */
148
- export function JsonTypes_composeParameterValue(header, value) {
149
- const patternInput = JsonTypes_valueOfCell(value);
150
- const p = ProtocolParameter.create(undefined, header.ToTerm());
151
- return ProcessParameterValue.create(p, unwrap(patternInput[0]), unwrap(patternInput[1]));
152
- }
153
- /**
154
- * Convert a CompositeHeader and Cell tuple to a ISA FactorValue
155
- */
156
- export function JsonTypes_composeFactorValue(header, value) {
157
- const patternInput = JsonTypes_valueOfCell(value);
158
- return FactorValue_create_30BDC49(undefined, Factor.create(toString(header), header.ToTerm()), unwrap(patternInput[0]), unwrap(patternInput[1]));
159
- }
160
- /**
161
- * Convert a CompositeHeader and Cell tuple to a ISA MaterialAttributeValue
162
- */
163
- export function JsonTypes_composeCharacteristicValue(header, value) {
164
- const patternInput = JsonTypes_valueOfCell(value);
165
- return MaterialAttributeValue_create_ZE1D108D(undefined, MaterialAttribute_create_A220A8A(undefined, header.ToTerm()), unwrap(patternInput[0]), unwrap(patternInput[1]));
166
- }
167
- export function JsonTypes_composeFreetextMaterialName(headerFT, name) {
168
- return `${headerFT}=${name}`;
169
- }
170
- /**
171
- * Convert a CompositeHeader and Cell tuple to a ISA ProcessInput
172
- */
173
- export function JsonTypes_composeProcessInput(header, value) {
174
- if (header.tag === /* Input */ 11) {
175
- switch (header.fields[0].tag) {
176
- case /* Sample */ 1:
177
- return ProcessInput_createSample_Z598187B7(toString(value));
178
- case /* Material */ 3:
179
- return ProcessInput_createMaterial_4452CB4C(toString(value));
180
- case /* Data */ 2:
181
- return ProcessInput_createRawData_Z721C83C5(toString(value));
182
- case /* FreeText */ 4: {
183
- const ft = header.fields[0].fields[0];
184
- return ProcessInput_createMaterial_4452CB4C(JsonTypes_composeFreetextMaterialName(ft, toString(value)));
185
- }
186
- default:
187
- return ProcessInput_createSource_Z5E00540E(toString(value));
188
- }
189
- }
190
- else {
191
- return toFail(printf("Could not parse input header %O"))(header);
192
- }
193
- }
194
- /**
195
- * Convert a CompositeHeader and Cell tuple to a ISA ProcessOutput
196
- */
197
- export function JsonTypes_composeProcessOutput(header, value) {
198
- let matchResult, ft;
199
- if (header.tag === /* Output */ 12) {
200
- switch (header.fields[0].tag) {
201
- case /* Material */ 3: {
202
- matchResult = 1;
203
- break;
204
- }
205
- case /* Data */ 2: {
206
- matchResult = 2;
207
- break;
208
- }
209
- case /* FreeText */ 4: {
210
- matchResult = 3;
211
- ft = header.fields[0].fields[0];
212
- break;
213
- }
214
- default:
215
- matchResult = 0;
216
- }
217
- }
218
- else {
219
- matchResult = 4;
220
- }
221
- switch (matchResult) {
222
- case 0:
223
- return ProcessOutput_createSample_Z598187B7(toString(value));
224
- case 1:
225
- return ProcessOutput_createMaterial_4452CB4C(toString(value));
226
- case 2:
227
- return ProcessOutput_createRawData_Z721C83C5(toString(value));
228
- case 3:
229
- return ProcessOutput_createMaterial_4452CB4C(JsonTypes_composeFreetextMaterialName(ft, toString(value)));
230
- default:
231
- return toFail(printf("Could not parse output header %O"))(header);
232
- }
233
- }
234
- /**
235
- * Convert an ISA Value and Unit tuple to a CompositeCell
236
- */
237
- export function JsonTypes_cellOfValue(value, unit) {
238
- const value_2 = defaultArg(value, Value_Name(""));
239
- let matchResult, oa, text, name, u, f, u_1, f_1, i, u_2, i_1;
240
- switch (value_2.tag) {
241
- case /* Name */ 3: {
242
- if (value_2.fields[0] === "") {
243
- if (unit != null) {
244
- matchResult = 3;
245
- name = value_2.fields[0];
246
- u = value_10(unit);
247
- }
248
- else {
249
- matchResult = 1;
250
- }
251
- }
252
- else if (unit != null) {
253
- matchResult = 3;
254
- name = value_2.fields[0];
255
- u = value_10(unit);
256
- }
257
- else {
258
- matchResult = 2;
259
- text = value_2.fields[0];
260
- }
261
- break;
262
- }
263
- case /* Float */ 2: {
264
- if (unit == null) {
265
- matchResult = 5;
266
- f_1 = value_2.fields[0];
267
- }
268
- else {
269
- matchResult = 4;
270
- f = value_2.fields[0];
271
- u_1 = value_10(unit);
272
- }
273
- break;
274
- }
275
- case /* Int */ 1: {
276
- if (unit == null) {
277
- matchResult = 7;
278
- i_1 = value_2.fields[0];
279
- }
280
- else {
281
- matchResult = 6;
282
- i = value_2.fields[0];
283
- u_2 = value_10(unit);
284
- }
285
- break;
286
- }
287
- default:
288
- if (unit == null) {
289
- matchResult = 0;
290
- oa = value_2.fields[0];
291
- }
292
- else {
293
- matchResult = 8;
294
- }
295
- }
296
- switch (matchResult) {
297
- case 0:
298
- return CompositeCell_Term(oa);
299
- case 1:
300
- return CompositeCell_Term(new OntologyAnnotation());
301
- case 2:
302
- return CompositeCell_Term(new OntologyAnnotation(text));
303
- case 3:
304
- return CompositeCell_Unitized(name, u);
305
- case 4:
306
- return CompositeCell_Unitized(f.toString(), u_1);
307
- case 5:
308
- return CompositeCell_Unitized(f_1.toString(), new OntologyAnnotation());
309
- case 6:
310
- return CompositeCell_Unitized(int32ToString(i), u_2);
311
- case 7:
312
- return CompositeCell_Unitized(int32ToString(i_1), new OntologyAnnotation());
313
- default:
314
- return toFail(printf("Could not parse value %O with unit %O"))(value_2)(unit);
315
- }
316
- }
317
- /**
318
- * Convert an ISA Component to a CompositeHeader and Cell tuple
319
- */
320
- export function JsonTypes_decomposeComponent(c) {
321
- return [CompositeHeader_Component(value_10(c.ComponentType)), JsonTypes_cellOfValue(c.ComponentValue, c.ComponentUnit)];
322
- }
323
- /**
324
- * Convert an ISA ProcessParameterValue to a CompositeHeader and Cell tuple
325
- */
326
- export function JsonTypes_decomposeParameterValue(ppv) {
327
- return [CompositeHeader_Parameter(value_10(value_10(ppv.Category).ParameterName)), JsonTypes_cellOfValue(ppv.Value, ppv.Unit)];
328
- }
329
- /**
330
- * Convert an ISA FactorValue to a CompositeHeader and Cell tuple
331
- */
332
- export function JsonTypes_decomposeFactorValue(fv) {
333
- return [CompositeHeader_Factor(value_10(value_10(fv.Category).FactorType)), JsonTypes_cellOfValue(fv.Value, fv.Unit)];
334
- }
335
- /**
336
- * Convert an ISA MaterialAttributeValue to a CompositeHeader and Cell tuple
337
- */
338
- export function JsonTypes_decomposeCharacteristicValue(cv) {
339
- return [CompositeHeader_Characteristic(value_10(value_10(cv.Category).CharacteristicType)), JsonTypes_cellOfValue(cv.Value, cv.Unit)];
340
- }
341
- /**
342
- * Convert an ISA ProcessOutput to a CompositeHeader and Cell tuple
343
- */
344
- export function JsonTypes_decomposeProcessInput(pi) {
345
- switch (pi.tag) {
346
- case /* Sample */ 1:
347
- return [CompositeHeader_Input(IOType_Sample()), CompositeCell_FreeText(defaultArg(pi.fields[0].Name, ""))];
348
- case /* Material */ 3:
349
- return [CompositeHeader_Input(IOType_Material()), CompositeCell_FreeText(defaultArg(pi.fields[0].Name, ""))];
350
- case /* Data */ 2: {
351
- const d = pi.fields[0];
352
- const dataType = value_10(d.DataType);
353
- switch (dataType.tag) {
354
- case /* RawDataFile */ 0:
355
- return [CompositeHeader_Input(IOType_Data()), CompositeCell_FreeText(defaultArg(d.Name, ""))];
356
- case /* DerivedDataFile */ 1:
357
- return [CompositeHeader_Input(IOType_Data()), CompositeCell_FreeText(defaultArg(d.Name, ""))];
358
- default:
359
- return [CompositeHeader_Input(IOType_Data()), CompositeCell_FreeText(defaultArg(d.Name, ""))];
360
- }
361
- }
362
- default:
363
- return [CompositeHeader_Input(IOType_Source()), CompositeCell_FreeText(defaultArg(pi.fields[0].Name, ""))];
364
- }
365
- }
366
- /**
367
- * Convert an ISA ProcessOutput to a CompositeHeader and Cell tuple
368
- */
369
- export function JsonTypes_decomposeProcessOutput(po) {
370
- switch (po.tag) {
371
- case /* Material */ 2:
372
- return [CompositeHeader_Output(IOType_Material()), CompositeCell_FreeText(defaultArg(po.fields[0].Name, ""))];
373
- case /* Data */ 1: {
374
- const d = po.fields[0];
375
- const dataType = value_10(d.DataType);
376
- switch (dataType.tag) {
377
- case /* RawDataFile */ 0:
378
- return [CompositeHeader_Output(IOType_Data()), CompositeCell_FreeText(defaultArg(d.Name, ""))];
379
- case /* DerivedDataFile */ 1:
380
- return [CompositeHeader_Output(IOType_Data()), CompositeCell_FreeText(defaultArg(d.Name, ""))];
381
- default:
382
- return [CompositeHeader_Output(IOType_Data()), CompositeCell_FreeText(defaultArg(d.Name, ""))];
383
- }
384
- }
385
- default:
386
- return [CompositeHeader_Output(IOType_Sample()), CompositeCell_FreeText(defaultArg(po.fields[0].Name, ""))];
387
- }
388
- }
389
- /**
390
- * This function creates a string containing the name and the ontology short-string of the given ontology annotation term
391
- *
392
- * TechnologyPlatforms are plain strings in ISA-JSON.
393
- *
394
- * This function allows us, to parse them as an ontology term.
395
- */
396
- export function JsonTypes_composeTechnologyPlatform(tp) {
397
- const matchValue = tp.TANInfo;
398
- if (matchValue == null) {
399
- return `${tp.NameText}`;
400
- }
401
- else {
402
- return `${tp.NameText} (${tp.TermAccessionShort})`;
403
- }
404
- }
405
- /**
406
- * This function parses the given string containing the name and the ontology short-string of the given ontology annotation term
407
- *
408
- * TechnologyPlatforms are plain strings in ISA-JSON.
409
- *
410
- * This function allows us, to parse them as an ontology term.
411
- */
412
- export function JsonTypes_decomposeTechnologyPlatform(name) {
413
- const activePatternResult = ActivePatterns_$007CRegex$007C_$007C("^(?<value>.+) \\((?<ontology>[^(]*:[^)]*)\\)$", name);
414
- if (activePatternResult != null) {
415
- const r = value_10(activePatternResult);
416
- let oa;
417
- const tan = (r.groups && r.groups.ontology) || "";
418
- oa = OntologyAnnotation.fromTermAnnotation(tan);
419
- const v = (r.groups && r.groups.value) || "";
420
- return OntologyAnnotation.create(v, unwrap(oa.TermSourceREF), unwrap(oa.TermAccessionNumber));
421
- }
422
- else {
423
- return OntologyAnnotation.create(name);
424
- }
425
- }
426
- /**
427
- * If the given headers depict a component, returns a function for parsing the values of the matrix to the values of this component
428
- */
429
- export function ProcessParsing_tryComponentGetter(generalI, valueI, valueHeader) {
430
- if (valueHeader.tag === /* Component */ 0) {
431
- const oa = valueHeader.fields[0];
432
- const newOA = oa.Copy();
433
- ARCtrl_OntologyAnnotation__OntologyAnnotation_SetColumnIndex_Z524259A4(newOA, valueI);
434
- const cat = CompositeHeader_Component(newOA);
435
- return (table) => ((i) => {
436
- let matchValue;
437
- return JsonTypes_composeComponent(cat, (matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values), (matchValue == null) ? getEmptyCellForHeader(cat, undefined) : value_10(matchValue)));
438
- });
439
- }
440
- else {
441
- return undefined;
442
- }
443
- }
444
- /**
445
- * If the given headers depict a parameter, returns a function for parsing the values of the matrix to the values of this type
446
- */
447
- export function ProcessParsing_tryParameterGetter(generalI, valueI, valueHeader) {
448
- if (valueHeader.tag === /* Parameter */ 3) {
449
- const cat = CompositeHeader_Parameter(ARCtrl_OntologyAnnotation__OntologyAnnotation_setColumnIndex_Static(valueI, valueHeader.fields[0]));
450
- return (table) => ((i_1) => {
451
- let matchValue;
452
- return JsonTypes_composeParameterValue(cat, (matchValue = Unchecked_tryGetCellAt(generalI, i_1, table.Values), (matchValue == null) ? getEmptyCellForHeader(cat, undefined) : value_10(matchValue)));
453
- });
454
- }
455
- else {
456
- return undefined;
457
- }
458
- }
459
- /**
460
- * If the given headers depict a factor, returns a function for parsing the values of the matrix to the values of this type
461
- */
462
- export function ProcessParsing_tryFactorGetter(generalI, valueI, valueHeader) {
463
- if (valueHeader.tag === /* Factor */ 2) {
464
- const cat = CompositeHeader_Factor(ARCtrl_OntologyAnnotation__OntologyAnnotation_setColumnIndex_Static(valueI, valueHeader.fields[0]));
465
- return (table) => ((i_1) => {
466
- let matchValue;
467
- return JsonTypes_composeFactorValue(cat, (matchValue = Unchecked_tryGetCellAt(generalI, i_1, table.Values), (matchValue == null) ? getEmptyCellForHeader(cat, undefined) : value_10(matchValue)));
468
- });
469
- }
470
- else {
471
- return undefined;
472
- }
473
- }
474
- /**
475
- * If the given headers depict a protocolType, returns a function for parsing the values of the matrix to the values of this type
476
- */
477
- export function ProcessParsing_tryCharacteristicGetter(generalI, valueI, valueHeader) {
478
- if (valueHeader.tag === /* Characteristic */ 1) {
479
- const cat = CompositeHeader_Characteristic(ARCtrl_OntologyAnnotation__OntologyAnnotation_setColumnIndex_Static(valueI, valueHeader.fields[0]));
480
- return (table) => ((i_1) => {
481
- let matchValue;
482
- return JsonTypes_composeCharacteristicValue(cat, (matchValue = Unchecked_tryGetCellAt(generalI, i_1, table.Values), (matchValue == null) ? getEmptyCellForHeader(cat, undefined) : value_10(matchValue)));
483
- });
484
- }
485
- else {
486
- return undefined;
487
- }
488
- }
489
- /**
490
- * If the given headers depict a protocolType, returns a function for parsing the values of the matrix to the values of this type
491
- */
492
- export function ProcessParsing_tryGetProtocolTypeGetter(generalI, header) {
493
- if (header.tag === /* ProtocolType */ 4) {
494
- return (table) => ((i) => {
495
- const matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values);
496
- if (matchValue == null) {
497
- return new OntologyAnnotation();
498
- }
499
- else {
500
- const cell = value_10(matchValue);
501
- return cell.AsTerm;
502
- }
503
- });
504
- }
505
- else {
506
- return undefined;
507
- }
508
- }
509
- /**
510
- * If the given headers depict a protocolREF, returns a function for parsing the values of the matrix to the values of this type
511
- */
512
- export function ProcessParsing_tryGetProtocolREFGetter(generalI, header) {
513
- if (header.tag === /* ProtocolREF */ 8) {
514
- return (table) => ((i) => {
515
- const matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values);
516
- if (matchValue == null) {
517
- return "";
518
- }
519
- else {
520
- const cell = value_10(matchValue);
521
- return cell.AsFreeText;
522
- }
523
- });
524
- }
525
- else {
526
- return undefined;
527
- }
528
- }
529
- /**
530
- * If the given headers depict a protocolDescription, returns a function for parsing the values of the matrix to the values of this type
531
- */
532
- export function ProcessParsing_tryGetProtocolDescriptionGetter(generalI, header) {
533
- if (header.tag === /* ProtocolDescription */ 5) {
534
- return (table) => ((i) => {
535
- const matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values);
536
- if (matchValue == null) {
537
- return "";
538
- }
539
- else {
540
- const cell = value_10(matchValue);
541
- return cell.AsFreeText;
542
- }
543
- });
544
- }
545
- else {
546
- return undefined;
547
- }
548
- }
549
- /**
550
- * If the given headers depict a protocolURI, returns a function for parsing the values of the matrix to the values of this type
551
- */
552
- export function ProcessParsing_tryGetProtocolURIGetter(generalI, header) {
553
- if (header.tag === /* ProtocolUri */ 6) {
554
- return (table) => ((i) => {
555
- const matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values);
556
- if (matchValue == null) {
557
- return "";
558
- }
559
- else {
560
- const cell = value_10(matchValue);
561
- return cell.AsFreeText;
562
- }
563
- });
564
- }
565
- else {
566
- return undefined;
567
- }
568
- }
569
- /**
570
- * If the given headers depict a protocolVersion, returns a function for parsing the values of the matrix to the values of this type
571
- */
572
- export function ProcessParsing_tryGetProtocolVersionGetter(generalI, header) {
573
- if (header.tag === /* ProtocolVersion */ 7) {
574
- return (table) => ((i) => {
575
- const matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values);
576
- if (matchValue == null) {
577
- return "";
578
- }
579
- else {
580
- const cell = value_10(matchValue);
581
- return cell.AsFreeText;
582
- }
583
- });
584
- }
585
- else {
586
- return undefined;
587
- }
588
- }
589
- /**
590
- * If the given headers depict an input, returns a function for parsing the values of the matrix to the values of this type
591
- */
592
- export function ProcessParsing_tryGetInputGetter(generalI, header) {
593
- if (header.tag === /* Input */ 11) {
594
- const io = header.fields[0];
595
- return (table) => ((i) => {
596
- let matchValue;
597
- return JsonTypes_composeProcessInput(header, (matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values), (matchValue == null) ? getEmptyCellForHeader(header, undefined) : value_10(matchValue)));
598
- });
599
- }
600
- else {
601
- return undefined;
602
- }
603
- }
604
- /**
605
- * If the given headers depict an output, returns a function for parsing the values of the matrix to the values of this type
606
- */
607
- export function ProcessParsing_tryGetOutputGetter(generalI, header) {
608
- if (header.tag === /* Output */ 12) {
609
- const io = header.fields[0];
610
- return (table) => ((i) => {
611
- let matchValue;
612
- return JsonTypes_composeProcessOutput(header, (matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values), (matchValue == null) ? getEmptyCellForHeader(header, undefined) : value_10(matchValue)));
613
- });
614
- }
615
- else {
616
- return undefined;
617
- }
618
- }
619
- /**
620
- * If the given headers depict a comment, returns a function for parsing the values of the matrix to the values of this type
621
- */
622
- export function ProcessParsing_tryGetCommentGetter(generalI, header) {
623
- if (header.tag === /* Comment */ 14) {
624
- const c = header.fields[0];
625
- return (table) => ((i) => {
626
- const matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values);
627
- if (matchValue == null) {
628
- return new Comment$(c);
629
- }
630
- else {
631
- const cell = value_10(matchValue);
632
- return new Comment$(c, cell.AsFreeText);
633
- }
634
- });
635
- }
636
- else {
637
- return undefined;
638
- }
639
- }
640
- /**
641
- * Given the header sequence of an ArcTable, returns a function for parsing each row of the table to a process
642
- */
643
- export function ProcessParsing_getProcessGetter(processNameRoot, headers) {
644
- const headers_1 = indexed(headers);
645
- const valueHeaders = toList(indexed(filter((arg) => arg[1].IsCvParamColumn, headers_1)));
646
- const charGetters = choose_1((tupledArg) => {
647
- const _arg = tupledArg[1];
648
- return ProcessParsing_tryCharacteristicGetter(_arg[0], tupledArg[0], _arg[1]);
649
- }, valueHeaders);
650
- const factorValueGetters = choose_1((tupledArg_1) => {
651
- const _arg_1 = tupledArg_1[1];
652
- return ProcessParsing_tryFactorGetter(_arg_1[0], tupledArg_1[0], _arg_1[1]);
653
- }, valueHeaders);
654
- const parameterValueGetters = choose_1((tupledArg_2) => {
655
- const _arg_2 = tupledArg_2[1];
656
- return ProcessParsing_tryParameterGetter(_arg_2[0], tupledArg_2[0], _arg_2[1]);
657
- }, valueHeaders);
658
- const componentGetters = choose_1((tupledArg_3) => {
659
- const _arg_3 = tupledArg_3[1];
660
- return ProcessParsing_tryComponentGetter(_arg_3[0], tupledArg_3[0], _arg_3[1]);
661
- }, valueHeaders);
662
- const protocolTypeGetter = tryPick((tupledArg_4) => ProcessParsing_tryGetProtocolTypeGetter(tupledArg_4[0], tupledArg_4[1]), headers_1);
663
- const protocolREFGetter = tryPick((tupledArg_5) => ProcessParsing_tryGetProtocolREFGetter(tupledArg_5[0], tupledArg_5[1]), headers_1);
664
- const protocolDescriptionGetter = tryPick((tupledArg_6) => ProcessParsing_tryGetProtocolDescriptionGetter(tupledArg_6[0], tupledArg_6[1]), headers_1);
665
- const protocolURIGetter = tryPick((tupledArg_7) => ProcessParsing_tryGetProtocolURIGetter(tupledArg_7[0], tupledArg_7[1]), headers_1);
666
- const protocolVersionGetter = tryPick((tupledArg_8) => ProcessParsing_tryGetProtocolVersionGetter(tupledArg_8[0], tupledArg_8[1]), headers_1);
667
- const commentGetters = toList(choose((tupledArg_9) => ProcessParsing_tryGetCommentGetter(tupledArg_9[0], tupledArg_9[1]), headers_1));
668
- let inputGetter_1;
669
- const matchValue = tryPick((tupledArg_10) => ProcessParsing_tryGetInputGetter(tupledArg_10[0], tupledArg_10[1]), headers_1);
670
- if (matchValue == null) {
671
- inputGetter_1 = ((table_1) => ((i_1) => singleton(ProcessInput_Source(Source_create_Z5CA08497(undefined, `${processNameRoot}_Input_${i_1}`, toList(map_1((f_1) => f_1(table_1)(i_1), charGetters)))))));
672
- }
673
- else {
674
- const inputGetter = value_10(matchValue);
675
- inputGetter_1 = ((table) => ((i) => {
676
- const chars = toList(map_1((f) => f(table)(i), charGetters));
677
- const input = inputGetter(table)(i);
678
- return (!(ProcessInput__isSample(input) ? true : ProcessInput__isSource(input)) && !isEmpty(chars)) ? ofArray([input, ProcessInput_createSample_Z598187B7(ProcessInput__get_Name(input), chars)]) : singleton((length(chars) > 0) ? ProcessInput_setCharacteristicValues(chars, input) : input);
679
- }));
680
- }
681
- let outputGetter_1;
682
- const matchValue_1 = tryPick((tupledArg_11) => ProcessParsing_tryGetOutputGetter(tupledArg_11[0], tupledArg_11[1]), headers_1);
683
- if (matchValue_1 == null) {
684
- outputGetter_1 = ((table_3) => ((i_3) => singleton(ProcessOutput_Sample(Sample_create_62424AD2(undefined, `${processNameRoot}_Output_${i_3}`, undefined, toList(map_1((f_3) => f_3(table_3)(i_3), factorValueGetters)))))));
685
- }
686
- else {
687
- const outputGetter = value_10(matchValue_1);
688
- outputGetter_1 = ((table_2) => ((i_2) => {
689
- const factors = toList(map_1((f_2) => f_2(table_2)(i_2), factorValueGetters));
690
- const output = outputGetter(table_2)(i_2);
691
- return (!ProcessOutput__isSample(output) && !isEmpty(factors)) ? ofArray([output, ProcessOutput_createSample_Z598187B7(ProcessOutput__get_Name(output), undefined, factors)]) : singleton((length(factors) > 0) ? ProcessOutput_setFactorValues(factors, output) : output);
692
- }));
693
- }
694
- return (table_4) => ((i_4) => {
695
- const pn = map((p) => Process_composeName(p, i_4), Option_fromValueWithDefault("", processNameRoot));
696
- const paramvalues = Option_fromValueWithDefault(empty(), map_2((f_4) => f_4(table_4)(i_4), parameterValueGetters));
697
- const parameters = map((list_5) => map_2((pv) => value_10(pv.Category), list_5), paramvalues);
698
- const comments = Option_fromValueWithDefault(empty(), map_2((f_5) => f_5(table_4)(i_4), commentGetters));
699
- let protocol;
700
- const p_1 = Protocol_make(undefined, map((f_6) => f_6(table_4)(i_4), protocolREFGetter), map((f_7) => f_7(table_4)(i_4), protocolTypeGetter), map((f_8) => f_8(table_4)(i_4), protocolDescriptionGetter), map((f_9) => f_9(table_4)(i_4), protocolURIGetter), map((f_10) => f_10(table_4)(i_4), protocolVersionGetter), parameters, Option_fromValueWithDefault(empty(), map_2((f_11) => f_11(table_4)(i_4), componentGetters)), undefined);
701
- let matchResult;
702
- if (p_1.Name == null) {
703
- if (p_1.ProtocolType == null) {
704
- if (p_1.Description == null) {
705
- if (p_1.Uri == null) {
706
- if (p_1.Version == null) {
707
- if (p_1.Components == null) {
708
- matchResult = 0;
709
- }
710
- else {
711
- matchResult = 1;
712
- }
713
- }
714
- else {
715
- matchResult = 1;
716
- }
717
- }
718
- else {
719
- matchResult = 1;
720
- }
721
- }
722
- else {
723
- matchResult = 1;
724
- }
725
- }
726
- else {
727
- matchResult = 1;
728
- }
729
- }
730
- else {
731
- matchResult = 1;
732
- }
733
- switch (matchResult) {
734
- case 0: {
735
- protocol = undefined;
736
- break;
737
- }
738
- default:
739
- protocol = p_1;
740
- }
741
- let patternInput;
742
- const inputs = inputGetter_1(table_4)(i_4);
743
- const outputs = outputGetter_1(table_4)(i_4);
744
- patternInput = (((length(inputs) === 1) && (length(outputs) === 2)) ? [ofArray([item(0, inputs), item(0, inputs)]), outputs] : (((length(inputs) === 2) && (length(outputs) === 1)) ? [inputs, ofArray([item(0, outputs), item(0, outputs)])] : [inputs, outputs]));
745
- return Process_make(undefined, pn, protocol, paramvalues, undefined, undefined, undefined, undefined, patternInput[0], patternInput[1], comments);
746
- });
747
- }
748
- /**
749
- * Groups processes by their name, or by the name of the protocol they execute
750
- *
751
- * Process names are taken from the Worksheet name and numbered: SheetName_1, SheetName_2, etc.
752
- *
753
- * This function decomposes this name into a root name and a number, and groups processes by root name.
754
- */
755
- export function ProcessParsing_groupProcesses(ps) {
756
- return List_groupBy((x) => {
757
- if ((x.Name != null) && (Process_decomposeName_Z721C83C5(value_10(x.Name))[1] != null)) {
758
- return Process_decomposeName_Z721C83C5(value_10(x.Name))[0];
759
- }
760
- else if ((x.ExecutesProtocol != null) && (value_10(x.ExecutesProtocol).Name != null)) {
761
- return value_10(value_10(x.ExecutesProtocol).Name);
762
- }
763
- else if (x.Name != null) {
764
- return value_10(x.Name);
765
- }
766
- else if ((x.ExecutesProtocol != null) && (value_10(x.ExecutesProtocol).ID != null)) {
767
- return value_10(value_10(x.ExecutesProtocol).ID);
768
- }
769
- else {
770
- return createMissingIdentifier();
771
- }
772
- }, ps, {
773
- Equals: (x_1, y) => (x_1 === y),
774
- GetHashCode: stringHash,
775
- });
776
- }
777
- /**
778
- * Merges processes with the same name, protocol and param values
779
- */
780
- export function ProcessParsing_mergeIdenticalProcesses(processes) {
781
- const l = List_groupBy((x) => {
782
- if ((x.Name != null) && (Process_decomposeName_Z721C83C5(value_10(x.Name))[1] != null)) {
783
- return [Process_decomposeName_Z721C83C5(value_10(x.Name))[0], boxHashOption(x.ExecutesProtocol), map(boxHashSeq, x.ParameterValues), map(boxHashSeq, x.Comments)];
784
- }
785
- else if ((x.ExecutesProtocol != null) && (value_10(x.ExecutesProtocol).Name != null)) {
786
- return [value_10(value_10(x.ExecutesProtocol).Name), boxHashOption(x.ExecutesProtocol), map(boxHashSeq, x.ParameterValues), map(boxHashSeq, x.Comments)];
787
- }
788
- else {
789
- return [createMissingIdentifier(), boxHashOption(x.ExecutesProtocol), map(boxHashSeq, x.ParameterValues), map(boxHashSeq, x.Comments)];
790
- }
791
- }, processes, {
792
- Equals: equalArrays,
793
- GetHashCode: arrayHash,
794
- });
795
- return mapIndexed((i, tupledArg) => {
796
- const processes_1 = tupledArg[1];
797
- const n = tupledArg[0][0];
798
- const pVs = item(0, processes_1).ParameterValues;
799
- const inputs = Option_fromValueWithDefault(empty(), collect((p) => defaultArg(p.Inputs, empty()), processes_1));
800
- const outputs = Option_fromValueWithDefault(empty(), collect((p_1) => defaultArg(p_1.Outputs, empty()), processes_1));
801
- return Process_create_Z7C1F7FA9(undefined, (length(l) > 1) ? Process_composeName(n, i) : n, unwrap(item(0, processes_1).ExecutesProtocol), unwrap(pVs), undefined, undefined, undefined, undefined, unwrap(inputs), unwrap(outputs), unwrap(item(0, processes_1).Comments));
802
- }, l);
803
- }
804
- export function ProcessParsing_processToRows(p) {
805
- let list_4;
806
- const pvs = map_2((ppv) => [JsonTypes_decomposeParameterValue(ppv), tryGetParameterColumnIndex(ppv)], defaultArg(p.ParameterValues, empty()));
807
- let components;
808
- const matchValue = p.ExecutesProtocol;
809
- components = ((matchValue == null) ? empty() : map_2((ppv_1) => [JsonTypes_decomposeComponent(ppv_1), tryGetComponentIndex(ppv_1)], defaultArg(value_10(matchValue).Components, empty())));
810
- let protVals;
811
- const matchValue_1 = p.ExecutesProtocol;
812
- if (matchValue_1 == null) {
813
- protVals = empty();
814
- }
815
- else {
816
- const prot_1 = value_10(matchValue_1);
817
- protVals = toList(delay(() => append((prot_1.Name != null) ? singleton_1([CompositeHeader_ProtocolREF(), CompositeCell_FreeText(value_10(prot_1.Name))]) : empty_1(), delay(() => append((prot_1.ProtocolType != null) ? singleton_1([CompositeHeader_ProtocolType(), CompositeCell_Term(value_10(prot_1.ProtocolType))]) : empty_1(), delay(() => append((prot_1.Description != null) ? singleton_1([CompositeHeader_ProtocolDescription(), CompositeCell_FreeText(value_10(prot_1.Description))]) : empty_1(), delay(() => append((prot_1.Uri != null) ? singleton_1([CompositeHeader_ProtocolUri(), CompositeCell_FreeText(value_10(prot_1.Uri))]) : empty_1(), delay(() => ((prot_1.Version != null) ? singleton_1([CompositeHeader_ProtocolVersion(), CompositeCell_FreeText(value_10(prot_1.Version))]) : empty_1())))))))))));
818
- }
819
- const comments = map_2((c) => [CompositeHeader_Comment(defaultArg(c.Name, "")), CompositeCell_FreeText(defaultArg(c.Value, ""))], defaultArg(p.Comments, empty()));
820
- return map_2((tupledArg_1) => {
821
- const ios = tupledArg_1[1];
822
- const inputForCharas = defaultArg(tryPick_1((tupledArg_2) => {
823
- const i_2 = tupledArg_2[0];
824
- if (ProcessInput__isSource(i_2) ? true : ProcessInput__isSample(i_2)) {
825
- return i_2;
826
- }
827
- else {
828
- return undefined;
829
- }
830
- }, ios), head(ios)[0]);
831
- const inputForType = defaultArg(tryPick_1((tupledArg_3) => {
832
- const i_3 = tupledArg_3[0];
833
- if (ProcessInput__isData(i_3) ? true : ProcessInput__isMaterial(i_3)) {
834
- return i_3;
835
- }
836
- else {
837
- return undefined;
838
- }
839
- }, ios), head(ios)[0]);
840
- const chars = map_2((cv) => [JsonTypes_decomposeCharacteristicValue(cv), tryGetCharacteristicColumnIndex(cv)], ProcessInput_getCharacteristicValues_5B3D5BA9(inputForCharas));
841
- const outputForFactors = defaultArg(tryPick_1((tupledArg_4) => {
842
- const o_4 = tupledArg_4[1];
843
- if (ProcessOutput__isSample(o_4)) {
844
- return o_4;
845
- }
846
- else {
847
- return undefined;
848
- }
849
- }, ios), head(ios)[1]);
850
- const outputForType = defaultArg(tryPick_1((tupledArg_5) => {
851
- const o_5 = tupledArg_5[1];
852
- if (ProcessOutput__isData(o_5) ? true : ProcessOutput__isMaterial(o_5)) {
853
- return o_5;
854
- }
855
- else {
856
- return undefined;
857
- }
858
- }, ios), head(ios)[1]);
859
- const vals = map_2((tuple_5) => tuple_5[0], sortBy((arg) => defaultArg(arg[1], 10000), append_1(chars, append_1(components, append_1(pvs, map_2((fv) => [JsonTypes_decomposeFactorValue(fv), tryGetFactorColumnIndex(fv)], ProcessOutput_getFactorValues_Z42C11600(outputForFactors))))), {
860
- Compare: comparePrimitives,
861
- }));
862
- return toList(delay(() => append(singleton_1(JsonTypes_decomposeProcessInput(inputForType)), delay(() => append(protVals, delay(() => append(vals, delay(() => append(comments, delay(() => singleton_1(JsonTypes_decomposeProcessOutput(outputForType))))))))))));
863
- }, List_groupBy((tupledArg) => [ProcessInput__get_Name(tupledArg[0]), ProcessOutput__get_Name(tupledArg[1])], (list_4 = defaultArg(p.Outputs, empty()), zip(defaultArg(p.Inputs, empty()), list_4)), {
864
- Equals: equalArrays,
865
- GetHashCode: arrayHash,
866
- }));
867
- }
868
- export function ARCtrl_CompositeHeader__CompositeHeader_TryParameter(this$) {
869
- if (this$.tag === /* Parameter */ 3) {
870
- const oa = this$.fields[0];
871
- return ProtocolParameter.create(undefined, oa);
872
- }
873
- else {
874
- return undefined;
875
- }
876
- }
877
- export function ARCtrl_CompositeHeader__CompositeHeader_TryFactor(this$) {
878
- if (this$.tag === /* Factor */ 2) {
879
- const oa = this$.fields[0];
880
- return Factor.create(undefined, oa);
881
- }
882
- else {
883
- return undefined;
884
- }
885
- }
886
- export function ARCtrl_CompositeHeader__CompositeHeader_TryCharacteristic(this$) {
887
- if (this$.tag === /* Characteristic */ 1) {
888
- return MaterialAttribute_create_A220A8A(undefined, this$.fields[0]);
889
- }
890
- else {
891
- return undefined;
892
- }
893
- }
894
- export function ARCtrl_CompositeHeader__CompositeHeader_TryComponent(this$) {
895
- if (this$.tag === /* Component */ 0) {
896
- return Component_create_Z2F0B38C7(undefined, undefined, this$.fields[0]);
897
- }
898
- else {
899
- return undefined;
900
- }
901
- }
902
- /**
903
- * This function is used to improve interoperability with ISA-JSON types. It is not recommended for default ARCtrl usage.
904
- */
905
- export function ARCtrl_CompositeCell__CompositeCell_fromValue_Static_Z6986DF18(value, unit) {
906
- return JsonTypes_cellOfValue(value, unit);
907
- }
908
- export function CompositeRow_toProtocol(tableName, row) {
909
- return fold((p, hc) => {
910
- let matchResult, oa, v, v_1, v_2, v_3, oa_1, oa_2, unit, v_4, oa_3, t;
911
- switch (hc[0].tag) {
912
- case /* ProtocolType */ 4: {
913
- if (hc[1].tag === /* Term */ 0) {
914
- matchResult = 0;
915
- oa = hc[1].fields[0];
916
- }
917
- else {
918
- matchResult = 8;
919
- }
920
- break;
921
- }
922
- case /* ProtocolVersion */ 7: {
923
- if (hc[1].tag === /* FreeText */ 1) {
924
- matchResult = 1;
925
- v = hc[1].fields[0];
926
- }
927
- else {
928
- matchResult = 8;
929
- }
930
- break;
931
- }
932
- case /* ProtocolUri */ 6: {
933
- if (hc[1].tag === /* FreeText */ 1) {
934
- matchResult = 2;
935
- v_1 = hc[1].fields[0];
936
- }
937
- else {
938
- matchResult = 8;
939
- }
940
- break;
941
- }
942
- case /* ProtocolDescription */ 5: {
943
- if (hc[1].tag === /* FreeText */ 1) {
944
- matchResult = 3;
945
- v_2 = hc[1].fields[0];
946
- }
947
- else {
948
- matchResult = 8;
949
- }
950
- break;
951
- }
952
- case /* ProtocolREF */ 8: {
953
- if (hc[1].tag === /* FreeText */ 1) {
954
- matchResult = 4;
955
- v_3 = hc[1].fields[0];
956
- }
957
- else {
958
- matchResult = 8;
959
- }
960
- break;
961
- }
962
- case /* Parameter */ 3: {
963
- matchResult = 5;
964
- oa_1 = hc[0].fields[0];
965
- break;
966
- }
967
- case /* Component */ 0: {
968
- switch (hc[1].tag) {
969
- case /* Unitized */ 2: {
970
- matchResult = 6;
971
- oa_2 = hc[0].fields[0];
972
- unit = hc[1].fields[1];
973
- v_4 = hc[1].fields[0];
974
- break;
975
- }
976
- case /* Term */ 0: {
977
- matchResult = 7;
978
- oa_3 = hc[0].fields[0];
979
- t = hc[1].fields[0];
980
- break;
981
- }
982
- default:
983
- matchResult = 8;
984
- }
985
- break;
986
- }
987
- default:
988
- matchResult = 8;
989
- }
990
- switch (matchResult) {
991
- case 0:
992
- return Protocol_setProtocolType(p, oa);
993
- case 1:
994
- return Protocol_setVersion(p, v);
995
- case 2:
996
- return Protocol_setUri(p, v_1);
997
- case 3:
998
- return Protocol_setDescription(p, v_2);
999
- case 4:
1000
- return Protocol_setName(p, v_3);
1001
- case 5:
1002
- return Protocol_addParameter(ProtocolParameter.create(undefined, oa_1), p);
1003
- case 6:
1004
- return Protocol_addComponent(Component_create_Z2F0B38C7(Value_2.fromString(v_4), unit, oa_2), p);
1005
- case 7:
1006
- return Protocol_addComponent(Component_create_Z2F0B38C7(Value_Ontology(t), undefined, oa_3), p);
1007
- default:
1008
- return p;
1009
- }
1010
- }, Protocol_create_Z414665E7(undefined, tableName), row);
1011
- }
1012
- /**
1013
- * Create a new table from an ISA protocol.
1014
- *
1015
- * The table will have at most one row, with the protocol information and the component values
1016
- */
1017
- export function ARCtrl_ArcTable__ArcTable_fromProtocol_Static_3BF20962(p) {
1018
- const t = ArcTable.init(defaultArg(p.Name, createMissingIdentifier()));
1019
- const enumerator = getEnumerator(defaultArg(p.Parameters, empty()));
1020
- try {
1021
- while (enumerator["System.Collections.IEnumerator.MoveNext"]()) {
1022
- const pp = enumerator["System.Collections.Generic.IEnumerator`1.get_Current"]();
1023
- t.AddColumn(CompositeHeader_Parameter(value_10(pp.ParameterName)), undefined, unwrap(ARCtrl_Process_ProtocolParameter__ProtocolParameter_TryGetColumnIndex(pp)));
1024
- }
1025
- }
1026
- finally {
1027
- disposeSafe(enumerator);
1028
- }
1029
- const enumerator_1 = getEnumerator(defaultArg(p.Components, empty()));
1030
- try {
1031
- while (enumerator_1["System.Collections.IEnumerator.MoveNext"]()) {
1032
- const c = enumerator_1["System.Collections.Generic.IEnumerator`1.get_Current"]();
1033
- const v_1 = map((arg) => ResizeArray_singleton(ARCtrl_CompositeCell__CompositeCell_fromValue_Static_Z6986DF18(arg, unwrap(c.ComponentUnit))), c.ComponentValue);
1034
- t.AddColumn(CompositeHeader_Parameter(value_10(c.ComponentType)), unwrap(v_1), unwrap(ARCtrl_Process_Component__Component_TryGetColumnIndex(c)));
1035
- }
1036
- }
1037
- finally {
1038
- disposeSafe(enumerator_1);
1039
- }
1040
- map((d) => {
1041
- t.AddProtocolDescriptionColumn(ResizeArray_singleton(d));
1042
- }, p.Description);
1043
- map((d_1) => {
1044
- t.AddProtocolVersionColumn(ResizeArray_singleton(d_1));
1045
- }, p.Version);
1046
- map((d_2) => {
1047
- t.AddProtocolTypeColumn(ResizeArray_singleton(d_2));
1048
- }, p.ProtocolType);
1049
- map((d_3) => {
1050
- t.AddProtocolUriColumn(ResizeArray_singleton(d_3));
1051
- }, p.Uri);
1052
- map((d_4) => {
1053
- t.AddProtocolNameColumn(ResizeArray_singleton(d_4));
1054
- }, p.Name);
1055
- return t;
1056
- }
1057
- /**
1058
- * Returns the list of protocols executed in this ArcTable
1059
- */
1060
- export function ARCtrl_ArcTable__ArcTable_GetProtocols(this$) {
1061
- let source;
1062
- if (this$.RowCount === 0) {
1063
- return singleton((source = this$.Headers, fold((p, h) => {
1064
- switch (h.tag) {
1065
- case /* ProtocolType */ 4:
1066
- return Protocol_setProtocolType(p, new OntologyAnnotation());
1067
- case /* ProtocolVersion */ 7:
1068
- return Protocol_setVersion(p, "");
1069
- case /* ProtocolUri */ 6:
1070
- return Protocol_setUri(p, "");
1071
- case /* ProtocolDescription */ 5:
1072
- return Protocol_setDescription(p, "");
1073
- case /* ProtocolREF */ 8:
1074
- return Protocol_setName(p, "");
1075
- case /* Parameter */ 3: {
1076
- const oa = h.fields[0];
1077
- return Protocol_addParameter(ProtocolParameter.create(undefined, oa), p);
1078
- }
1079
- case /* Component */ 0:
1080
- return Protocol_addComponent(Component_create_Z2F0B38C7(undefined, undefined, h.fields[0]), p);
1081
- default:
1082
- return p;
1083
- }
1084
- }, Protocol_create_Z414665E7(undefined, this$.Name), source)));
1085
- }
1086
- else {
1087
- return List_distinct(initialize(this$.RowCount, (i) => {
1088
- let row;
1089
- const source_2 = this$.GetRow(i, true);
1090
- row = zip_1(this$.Headers, source_2);
1091
- return CompositeRow_toProtocol(this$.Name, row);
1092
- }), {
1093
- Equals: equals,
1094
- GetHashCode: safeHash,
1095
- });
1096
- }
1097
- }
1098
- /**
1099
- * Returns the list of processes specidified in this ArcTable
1100
- */
1101
- export function ARCtrl_ArcTable__ArcTable_GetProcesses(this$) {
1102
- if (this$.RowCount === 0) {
1103
- return singleton(Process_create_Z7C1F7FA9(undefined, this$.Name));
1104
- }
1105
- else {
1106
- let getter;
1107
- const clo = ProcessParsing_getProcessGetter(this$.Name, this$.Headers);
1108
- getter = ((arg) => {
1109
- const clo_1 = clo(arg);
1110
- return clo_1;
1111
- });
1112
- return ProcessParsing_mergeIdenticalProcesses(toList(delay(() => map_1((i) => getter(this$)(i), rangeDouble(0, 1, this$.RowCount - 1)))));
1113
- }
1114
- }
1115
- /**
1116
- * Create a new table from a list of processes
1117
- *
1118
- * The name will be used as the sheet name
1119
- *
1120
- * The processes SHOULD have the same headers, or even execute the same protocol
1121
- */
1122
- export function ARCtrl_ArcTable__ArcTable_fromProcesses_Static(name, ps) {
1123
- const tupledArg = Unchecked_alignByHeaders(true, collect(ProcessParsing_processToRows, ps));
1124
- return ArcTable.fromArcTableValues(name, tupledArg[0], tupledArg[1]);
1125
- }
1126
- /**
1127
- * Return a list of all the processes in all the tables.
1128
- */
1129
- export function ARCtrl_ArcTables__ArcTables_GetProcesses(this$) {
1130
- return collect(ARCtrl_ArcTable__ArcTable_GetProcesses, toList(this$.Tables));
1131
- }
1132
- /**
1133
- * Create a collection of tables from a list of processes.
1134
- *
1135
- * For this, the processes are grouped by nameroot ("nameroot_1", "nameroot_2" ...) or exectued protocol if no name exists
1136
- *
1137
- * Then each group is converted to a table with this nameroot as sheetname
1138
- */
1139
- export function ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D(ps) {
1140
- let collection;
1141
- return new ArcTables((collection = map_2((tupledArg) => {
1142
- const tupledArg_1 = Unchecked_alignByHeaders(true, collect(ProcessParsing_processToRows, tupledArg[1]));
1143
- return ArcTable.fromArcTableValues(tupledArg[0], tupledArg_1[0], tupledArg_1[1]);
1144
- }, ProcessParsing_groupProcesses(ps)), Array.from(collection)));
1145
- }