@jbrowse/plugin-wiggle 2.17.0 → 3.0.0

package/dist/BigWigAdapter/BigWigAdapter.d.ts

@@ -1,7 +1,8 @@
 import { BigWig } from '@gmod/bbi';
-import { BaseFeatureDataAdapter, BaseOptions } from '@jbrowse/core/data_adapters/BaseAdapter';
-import { AugmentedRegion as Region } from '@jbrowse/core/util/types';
-import { Feature } from '@jbrowse/core/util';
+import { BaseFeatureDataAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
+import type { BaseOptions } from '@jbrowse/core/data_adapters/BaseAdapter';
+import type { Feature } from '@jbrowse/core/util';
+import type { AugmentedRegion as Region } from '@jbrowse/core/util/types';
 interface WiggleOptions extends BaseOptions {
     resolution?: number;
 }

package/dist/BigWigAdapter/BigWigAdapter.js

@@ -2,8 +2,8 @@
 Object.defineProperty(exports, "__esModule", { value: true });
 const bbi_1 = require("@gmod/bbi");
 const BaseAdapter_1 = require("@jbrowse/core/data_adapters/BaseAdapter");
-const io_1 = require("@jbrowse/core/util/io");
 const util_1 = require("@jbrowse/core/util");
+const io_1 = require("@jbrowse/core/util/io");
 const rxjs_1 = require("@jbrowse/core/util/rxjs");
 const stats_1 = require("@jbrowse/core/util/stats");
 class BigWigAdapter extends BaseAdapter_1.BaseFeatureDataAdapter {
@@ -40,7 +40,7 @@ class BigWigAdapter extends BaseAdapter_1.BaseFeatureDataAdapter {
     }
     getFeatures(region, opts = {}) {
         const { refName, start, end } = region;
-        const { bpPerPx = 0, signal, resolution = 1, statusCallback = () => { }, } = opts;
+        const { bpPerPx = 0, stopToken, resolution = 1, statusCallback = () => { }, } = opts;
         return (0, rxjs_1.ObservableCreate)(async (observer) => {
             statusCallback('Downloading bigwig data');
             const source = this.getConf('source');
@@ -52,25 +52,20 @@ class BigWigAdapter extends BaseAdapter_1.BaseFeatureDataAdapter {
             });
             for (const data of feats) {
                 if (source) {
-                    // @ts-expect-error
                     data.source = source;
                 }
                 const uniqueId = `${source}:${region.refName}:${data.start}-${data.end}`;
-                // @ts-expect-error
                 data.refName = refName;
                 data.uniqueId = uniqueId;
                 observer.next({
-                    // @ts-expect-error
                     get: (str) => data[str],
                     id: () => uniqueId,
-                    // @ts-expect-error
                     toJSON: () => data,
                 });
             }
             observer.complete();
-        }, signal);
+        }, stopToken);
     }
-    // always render bigwig instead of calculating a feature density for it
     async getMultiRegionFeatureDensityStats(_regions) {
         return { featureDensity: 0 };
     }

package/dist/BigWigAdapter/configSchema.d.ts

@@ -1,7 +1,4 @@
 declare const BigWigAdapter: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    /**
-     * #slot
-     */
     bigWigLocation: {
         type: string;
         defaultValue: {
@@ -9,17 +6,11 @@ declare const BigWigAdapter: import("@jbrowse/core/configuration/configurationSc
             locationType: string;
         };
     };
-    /**
-     * #slot
-     */
     source: {
         type: string;
         defaultValue: string;
         description: string;
     };
-    /**
-     * #slot
-     */
     resolutionMultiplier: {
         type: string;
         defaultValue: number;

package/dist/BigWigAdapter/configSchema.js

@@ -1,14 +1,8 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
-/**
- * #config BigWigAdapter
- */
-function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
+function x() { }
 const BigWigAdapter = (0, configuration_1.ConfigurationSchema)('BigWigAdapter', {
-    /**
-     * #slot
-     */
     bigWigLocation: {
         type: 'fileLocation',
         defaultValue: {
@@ -16,17 +10,11 @@ const BigWigAdapter = (0, configuration_1.ConfigurationSchema)('BigWigAdapter',
             locationType: 'UriLocation',
         },
     },
-    /**
-     * #slot
-     */
     source: {
         type: 'string',
         defaultValue: '',
         description: 'Used for multiwiggle',
     },
-    /**
-     * #slot
-     */
     resolutionMultiplier: {
         type: 'number',
         defaultValue: 1,

package/dist/BigWigAdapter/index.d.ts

@@ -1,2 +1,2 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default function BigWigAdapterF(pluginManager: PluginManager): void;

package/dist/BigWigAdapter/index.js

@@ -15,13 +15,23 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
 }) : function(o, v) {
     o["default"] = v;
 });
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };

package/dist/CreateMultiWiggleExtension/ConfirmDialog.d.ts

@@ -1,9 +1,8 @@
-import React from 'react';
-import { AnyConfigurationModel } from '@jbrowse/core/configuration';
+import type { AnyConfigurationModel } from '@jbrowse/core/configuration';
 declare const ConfirmDialog: ({ tracks, onClose, }: {
     tracks: AnyConfigurationModel[];
     onClose: (arg: boolean, arg1?: {
         name: string;
     }) => void;
-}) => React.JSX.Element;
+}) => import("react/jsx-runtime").JSX.Element;
 export default ConfirmDialog;

package/dist/CreateMultiWiggleExtension/ConfirmDialog.js

@@ -1,61 +1,26 @@
 "use strict";
-var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    var desc = Object.getOwnPropertyDescriptor(m, k);
-    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
-      desc = { enumerable: true, get: function() { return m[k]; } };
-    }
-    Object.defineProperty(o, k2, desc);
-}) : (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    o[k2] = m[k];
-}));
-var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
-    Object.defineProperty(o, "default", { enumerable: true, value: v });
-}) : function(o, v) {
-    o["default"] = v;
-});
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-const react_1 = __importStar(require("react"));
-const material_1 = require("@mui/material");
-const Dialog_1 = __importDefault(require("@jbrowse/core/ui/Dialog"));
+const jsx_runtime_1 = require("react/jsx-runtime");
+const react_1 = require("react");
 const configuration_1 = require("@jbrowse/core/configuration");
+const Dialog_1 = __importDefault(require("@jbrowse/core/ui/Dialog"));
+const material_1 = require("@mui/material");
 const ConfirmDialog = ({ tracks, onClose, }) => {
     const [val, setVal] = (0, react_1.useState)(`MultiWiggle ${Date.now()}`);
     const allQuant = tracks.every(t => t.type === 'QuantitativeTrack');
-    return (react_1.default.createElement(Dialog_1.default, { open: true, onClose: () => {
+    return ((0, jsx_runtime_1.jsxs)(Dialog_1.default, { open: true, onClose: () => {
             onClose(false);
-        }, title: "Confirm multi-wiggle track create" },
-        react_1.default.createElement(material_1.DialogContent, null,
-            react_1.default.createElement(material_1.Typography, null,
-                !allQuant
-                    ? 'Not every track looks like a QuantitativeTrack. This could have unexpected behavior, confirm if it looks ok.'
-                    : null,
-                "Listing:"),
-            react_1.default.createElement("ul", null, tracks.map(track => (react_1.default.createElement("li", { key: track.trackId },
-                (0, configuration_1.readConfObject)(track, 'name'),
-                " - ",
-                track.type)))),
-            react_1.default.createElement(material_1.TextField, { value: val, onChange: event => {
-                    setVal(event.target.value);
-                }, helperText: "Track name" }),
-            react_1.default.createElement(material_1.Typography, null, "Confirm creation of track?")),
-        react_1.default.createElement(material_1.DialogActions, null,
-            react_1.default.createElement(material_1.Button, { onClick: () => {
-                    onClose(false);
-                }, color: "primary" }, "Cancel"),
-            react_1.default.createElement(material_1.Button, { onClick: () => {
-                    onClose(true, { name: val });
-                }, color: "primary", variant: "contained", autoFocus: true }, "Submit"))));
+        }, title: "Confirm multi-wiggle track create", children: [(0, jsx_runtime_1.jsxs)(material_1.DialogContent, { children: [(0, jsx_runtime_1.jsxs)(material_1.Typography, { children: [!allQuant
+                                ? 'Not every track looks like a QuantitativeTrack. This could have unexpected behavior, confirm if it looks ok.'
+                                : null, "Listing:"] }), (0, jsx_runtime_1.jsx)("ul", { children: tracks.map(track => ((0, jsx_runtime_1.jsxs)("li", { children: [(0, configuration_1.readConfObject)(track, 'name'), " - ", track.type] }, track.trackId))) }), (0, jsx_runtime_1.jsx)(material_1.TextField, { value: val, onChange: event => {
+                            setVal(event.target.value);
+                        }, helperText: "Track name" }), (0, jsx_runtime_1.jsx)(material_1.Typography, { children: "Confirm creation of track?" })] }), (0, jsx_runtime_1.jsxs)(material_1.DialogActions, { children: [(0, jsx_runtime_1.jsx)(material_1.Button, { onClick: () => {
+                            onClose(false);
+                        }, color: "primary", children: "Cancel" }), (0, jsx_runtime_1.jsx)(material_1.Button, { onClick: () => {
+                            onClose(true, { name: val });
+                        }, color: "primary", variant: "contained", autoFocus: true, children: "Submit" })] })] }));
 };
 exports.default = ConfirmDialog;

package/dist/CreateMultiWiggleExtension/index.d.ts

@@ -1,2 +1,2 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default function CreateMultiWiggleExtensionF(pm: PluginManager): void;

package/dist/CreateMultiWiggleExtension/index.js

@@ -15,19 +15,54 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
 }) : function(o, v) {
     o["default"] = v;
 });
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.default = CreateMultiWiggleExtensionF;
 const react_1 = require("react");
 const configuration_1 = require("@jbrowse/core/configuration");
 const util_1 = require("@jbrowse/core/util");
 const ConfirmDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./ConfirmDialog'))));
+function makeTrack({ model, arg, }) {
+    const tracks = model.selection;
+    const trackIds = tracks.map(c => (0, configuration_1.readConfObject)(c, 'name'));
+    const subadapters = tracks
+        .map(c => (0, configuration_1.readConfObject)(c, 'adapter'))
+        .map((c, idx) => ({ ...c, source: trackIds[idx] }));
+    const now = +Date.now();
+    const trackId = `multitrack-${now}-sessionTrack`;
+    const session = (0, util_1.getSession)(model);
+    if ((0, util_1.isSessionWithAddTracks)(session)) {
+        session.addTrackConf({
+            type: 'MultiQuantitativeTrack',
+            trackId,
+            name: arg.name,
+            assemblyNames: [
+                ...new Set(tracks.flatMap(c => (0, configuration_1.readConfObject)(c, 'assemblyNames'))),
+            ],
+            adapter: {
+                type: 'MultiWiggleAdapter',
+                subadapters,
+            },
+        });
+        model.view.showTrack(trackId);
+    }
+}
 function CreateMultiWiggleExtensionF(pm) {
     pm.addToExtensionPoint('TrackSelector-multiTrackMenuItems', (items, props) => {
         const { session } = props;
@@ -39,38 +74,13 @@ function CreateMultiWiggleExtensionF(pm) {
                         label: 'Create multi-wiggle track',
                         onClick: (model) => {
                             const tracks = model.selection;
-                            const trackIds = tracks.map(c => (0, configuration_1.readConfObject)(c, 'name'));
-                            function makeTrack(arg) {
-                                const subadapters = tracks
-                                    .map(c => (0, configuration_1.readConfObject)(c, 'adapter'))
-                                    .map((c, idx) => ({ ...c, source: trackIds[idx] }));
-                                const assemblyNames = [
-                                    ...new Set(tracks.flatMap(c => (0, configuration_1.readConfObject)(c, 'assemblyNames'))),
-                                ];
-                                const now = +Date.now();
-                                const trackId = `multitrack-${now}-sessionTrack`;
-                                const session = (0, util_1.getSession)(model);
-                                if ((0, util_1.isSessionWithAddTracks)(session)) {
-                                    session.addTrackConf({
-                                        type: 'MultiQuantitativeTrack',
-                                        trackId,
-                                        name: arg.name,
-                                        assemblyNames,
-                                        adapter: {
-                                            type: 'MultiWiggleAdapter',
-                                            subadapters,
-                                        },
-                                    });
-                                    model.view.showTrack(trackId);
-                                }
-                            }
                             (0, util_1.getSession)(model).queueDialog(handleClose => [
                                 ConfirmDialog,
                                 {
                                     tracks,
                                     onClose: (arg, arg1) => {
                                         if (arg && arg1) {
-                                            makeTrack(arg1);
+                                            makeTrack({ model, arg: arg1 });
                                         }
                                         handleClose();
                                     },

package/dist/DensityRenderer/DensityRenderer.d.ts

@@ -1,4 +1,5 @@
-import WiggleBaseRenderer, { RenderArgsDeserializedWithFeatures } from '../WiggleBaseRenderer';
+import WiggleBaseRenderer from '../WiggleBaseRenderer';
+import type { RenderArgsDeserializedWithFeatures } from '../WiggleBaseRenderer';
 export default class DensityRenderer extends WiggleBaseRenderer {
     draw(ctx: CanvasRenderingContext2D, props: RenderArgsDeserializedWithFeatures): Promise<{
         reducedFeatures: import("@jbrowse/core/util").Feature[];

package/dist/DensityRenderer/DensityRenderer.js

@@ -1,13 +1,46 @@
 "use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-const drawDensity_1 = require("../drawDensity");
 const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
 class DensityRenderer extends WiggleBaseRenderer_1.default {
     async draw(ctx, props) {
-        return (0, drawDensity_1.drawDensity)(ctx, props);
+        const { drawDensity } = await Promise.resolve().then(() => __importStar(require('../drawDensity')));
+        return drawDensity(ctx, props);
     }
 }
 exports.default = DensityRenderer;

package/dist/DensityRenderer/configSchema.js

@@ -5,14 +5,8 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
 const configSchema_1 = __importDefault(require("../configSchema"));
-/**
- * #config DensityRenderer
- */
-function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
+function x() { }
 const configSchema = (0, configuration_1.ConfigurationSchema)('DensityRenderer', {}, {
-    /**
-     * #baseConfiguration
-     */
     baseConfiguration: configSchema_1.default,
     explicitlyTyped: true,
 });

package/dist/DensityRenderer/index.d.ts

@@ -1,2 +1,2 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default function DensityRendererF(pluginManager: PluginManager): void;

package/dist/DensityRenderer/index.js

@@ -4,8 +4,8 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.default = DensityRendererF;
-const configSchema_1 = __importDefault(require("./configSchema"));
 const DensityRenderer_1 = __importDefault(require("./DensityRenderer"));
+const configSchema_1 = __importDefault(require("./configSchema"));
 const WiggleRendering_1 = __importDefault(require("../WiggleRendering"));
 function DensityRendererF(pluginManager) {
     pluginManager.addRendererType(() => new DensityRenderer_1.default({

package/dist/GuessAdapter/index.d.ts

@@ -0,0 +1,2 @@
+import type PluginManager from '@jbrowse/core/PluginManager';
+export default function GuessAdapterF(pluginManager: PluginManager): void;

package/dist/GuessAdapter/index.js

@@ -0,0 +1,25 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.default = GuessAdapterF;
+const util_1 = require("@jbrowse/core/util");
+const tracks_1 = require("@jbrowse/core/util/tracks");
+function GuessAdapterF(pluginManager) {
+    pluginManager.addToExtensionPoint('Core-guessAdapterForLocation', (cb) => {
+        return (file, index, adapterHint) => {
+            const fileName = (0, tracks_1.getFileName)(file);
+            return (0, util_1.testAdapter)(fileName, /\.(bw|bigwig)$/i, adapterHint, 'BigWigAdapter')
+                ? {
+                    type: 'BigWigAdapter',
+                    bigWigLocation: file,
+                }
+                : cb(file, index, adapterHint);
+        };
+    });
+    pluginManager.addToExtensionPoint('Core-guessTrackTypeForLocation', (trackTypeGuesser) => {
+        return (adapterName) => {
+            return adapterName === 'BigWigAdapter'
+                ? 'QuantitativeTrack'
+                : trackTypeGuesser(adapterName);
+        };
+    });
+}

package/dist/LinePlotRenderer/LinePlotRenderer.d.ts

@@ -1,5 +1,6 @@
-import { Feature } from '@jbrowse/core/util';
-import WiggleBaseRenderer, { RenderArgsDeserializedWithFeatures } from '../WiggleBaseRenderer';
+import WiggleBaseRenderer from '../WiggleBaseRenderer';
+import type { RenderArgsDeserializedWithFeatures } from '../WiggleBaseRenderer';
+import type { Feature } from '@jbrowse/core/util';
 export default class LinePlotRenderer extends WiggleBaseRenderer {
     draw(ctx: CanvasRenderingContext2D, props: RenderArgsDeserializedWithFeatures): Promise<{
         reducedFeatures: Feature[];

package/dist/LinePlotRenderer/LinePlotRenderer.js

@@ -1,4 +1,37 @@
 "use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
@@ -6,12 +39,12 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
 const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
 const util_1 = require("../util");
-const drawLine_1 = require("../drawLine");
 class LinePlotRenderer extends WiggleBaseRenderer_1.default {
     async draw(ctx, props) {
         const { config } = props;
         const c = (0, configuration_1.readConfObject)(config, 'color');
-        return (0, drawLine_1.drawLine)(ctx, {
+        const { drawLine } = await Promise.resolve().then(() => __importStar(require('../drawLine')));
+        return drawLine(ctx, {
             ...props,
             offset: util_1.YSCALEBAR_LABEL_OFFSET,
             colorCallback: c === '#f0f'

package/dist/LinePlotRenderer/configSchema.d.ts

@@ -1,7 +1,4 @@
 declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    /**
-     * #slot
-     */
     displayCrossHatches: {
         type: string;
         description: string;

package/dist/LinePlotRenderer/configSchema.js

@@ -5,23 +5,14 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
 const configSchema_1 = __importDefault(require("../configSchema"));
-/**
- * #config LinePlotRenderer
- */
-function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
+function x() { }
 const configSchema = (0, configuration_1.ConfigurationSchema)('LinePlotRenderer', {
-    /**
-     * #slot
-     */
     displayCrossHatches: {
         type: 'boolean',
         description: 'choose to draw cross hatches (sideways lines)',
         defaultValue: false,
     },
 }, {
-    /**
-     * #baseConfiguration
-     */
     baseConfiguration: configSchema_1.default,
     explicitlyTyped: true,
 });

package/dist/LinePlotRenderer/index.d.ts

@@ -1,2 +1,2 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default function LinePlotRendererF(pluginManager: PluginManager): void;

package/dist/LinearWiggleDisplay/components/SetColorDialog.d.ts

@@ -1,4 +1,3 @@
-import React from 'react';
 declare const SetColorDialog: ({ model, handleClose, }: {
     model: {
         color?: string;
@@ -9,5 +8,5 @@ declare const SetColorDialog: ({ model, handleClose, }: {
         setNegColor: (arg?: string) => void;
     };
     handleClose: () => void;
-}) => React.JSX.Element;
+}) => import("react/jsx-runtime").JSX.Element;
 export default SetColorDialog;