@jbrowse/plugin-wiggle 1.7.11 → 2.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BigWigAdapter/BigWigAdapter.d.ts +8 -7
- package/dist/BigWigAdapter/BigWigAdapter.js +205 -283
- package/dist/BigWigAdapter/BigWigAdapter.js.map +1 -0
- package/dist/BigWigAdapter/configSchema.js +17 -21
- package/dist/BigWigAdapter/configSchema.js.map +1 -0
- package/dist/BigWigAdapter/index.d.ts +3 -1
- package/dist/BigWigAdapter/index.js +42 -12
- package/dist/BigWigAdapter/index.js.map +1 -0
- package/dist/CreateMultiWiggleExtension/ConfirmDialog.d.ts +9 -0
- package/dist/CreateMultiWiggleExtension/ConfirmDialog.js +68 -0
- package/dist/CreateMultiWiggleExtension/ConfirmDialog.js.map +1 -0
- package/dist/CreateMultiWiggleExtension/index.d.ts +2 -0
- package/dist/CreateMultiWiggleExtension/index.js +111 -0
- package/dist/CreateMultiWiggleExtension/index.js.map +1 -0
- package/dist/DensityRenderer/DensityRenderer.d.ts +6 -0
- package/dist/DensityRenderer/DensityRenderer.js +74 -0
- package/dist/DensityRenderer/DensityRenderer.js.map +1 -0
- package/dist/DensityRenderer/configSchema.d.ts +2 -0
- package/dist/DensityRenderer/configSchema.js +10 -0
- package/dist/DensityRenderer/configSchema.js.map +1 -0
- package/dist/DensityRenderer/index.d.ts +3 -6
- package/dist/DensityRenderer/index.js +17 -135
- package/dist/DensityRenderer/index.js.map +1 -0
- package/dist/LinePlotRenderer/LinePlotRenderer.d.ts +4 -2
- package/dist/LinePlotRenderer/LinePlotRenderer.js +83 -168
- package/dist/LinePlotRenderer/LinePlotRenderer.js.map +1 -0
- package/dist/LinePlotRenderer/configSchema.d.ts +2 -2
- package/dist/LinePlotRenderer/configSchema.js +15 -69
- package/dist/LinePlotRenderer/configSchema.js.map +1 -0
- package/dist/LinePlotRenderer/index.d.ts +3 -3
- package/dist/LinePlotRenderer/index.js +17 -32
- package/dist/LinePlotRenderer/index.js.map +1 -0
- package/dist/LinearWiggleDisplay/components/SetColorDialog.d.ts +6 -2
- package/dist/LinearWiggleDisplay/components/SetColorDialog.js +88 -106
- package/dist/LinearWiggleDisplay/components/SetColorDialog.js.map +1 -0
- package/dist/LinearWiggleDisplay/components/SetMinMaxDialog.js +86 -107
- package/dist/LinearWiggleDisplay/components/SetMinMaxDialog.js.map +1 -0
- package/dist/LinearWiggleDisplay/components/Tooltip.d.ts +6 -11
- package/dist/LinearWiggleDisplay/components/Tooltip.js +47 -163
- package/dist/LinearWiggleDisplay/components/Tooltip.js.map +1 -0
- package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js +44 -50
- package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js.map +1 -0
- package/dist/LinearWiggleDisplay/components/YScaleBar.js +24 -31
- package/dist/LinearWiggleDisplay/components/YScaleBar.js.map +1 -0
- package/dist/LinearWiggleDisplay/index.d.ts +7 -3
- package/dist/LinearWiggleDisplay/index.js +27 -41
- package/dist/LinearWiggleDisplay/index.js.map +1 -0
- package/dist/LinearWiggleDisplay/models/configSchema.js +65 -69
- package/dist/LinearWiggleDisplay/models/configSchema.js.map +1 -0
- package/dist/LinearWiggleDisplay/models/model.d.ts +39 -18
- package/dist/LinearWiggleDisplay/models/model.js +538 -696
- package/dist/LinearWiggleDisplay/models/model.js.map +1 -0
- package/dist/MultiDensityRenderer/MultiDensityRenderer.d.ts +7 -0
- package/dist/MultiDensityRenderer/MultiDensityRenderer.js +135 -0
- package/dist/MultiDensityRenderer/MultiDensityRenderer.js.map +1 -0
- package/dist/MultiDensityRenderer/configSchema.d.ts +2 -0
- package/dist/MultiDensityRenderer/configSchema.js +10 -0
- package/dist/MultiDensityRenderer/configSchema.js.map +1 -0
- package/dist/MultiDensityRenderer/index.d.ts +3 -0
- package/dist/MultiDensityRenderer/index.js +19 -0
- package/dist/MultiDensityRenderer/index.js.map +1 -0
- package/dist/MultiLineRenderer/MultiLineRenderer.d.ts +7 -0
- package/dist/MultiLineRenderer/MultiLineRenderer.js +124 -0
- package/dist/MultiLineRenderer/MultiLineRenderer.js.map +1 -0
- package/dist/MultiLineRenderer/configSchema.d.ts +2 -0
- package/dist/MultiLineRenderer/configSchema.js +23 -0
- package/dist/MultiLineRenderer/configSchema.js.map +1 -0
- package/dist/MultiLineRenderer/index.d.ts +3 -0
- package/dist/MultiLineRenderer/index.js +19 -0
- package/dist/MultiLineRenderer/index.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +10 -0
- package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js +239 -0
- package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/components/SetMinMaxDialog.d.ts +11 -0
- package/dist/MultiLinearWiggleDisplay/components/SetMinMaxDialog.js +91 -0
- package/dist/MultiLinearWiggleDisplay/components/SetMinMaxDialog.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/components/Tooltip.d.ts +25 -0
- package/dist/MultiLinearWiggleDisplay/components/Tooltip.js +78 -0
- package/dist/MultiLinearWiggleDisplay/components/Tooltip.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +13 -0
- package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js +144 -0
- package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/components/YScaleBar.d.ts +7 -0
- package/dist/MultiLinearWiggleDisplay/components/YScaleBar.js +26 -0
- package/dist/MultiLinearWiggleDisplay/components/YScaleBar.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/components/util.d.ts +10 -0
- package/dist/MultiLinearWiggleDisplay/components/util.js +38 -0
- package/dist/MultiLinearWiggleDisplay/components/util.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/index.d.ts +3 -0
- package/dist/MultiLinearWiggleDisplay/index.js +23 -0
- package/dist/MultiLinearWiggleDisplay/index.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/models/configSchema.d.ts +2 -0
- package/dist/MultiLinearWiggleDisplay/models/configSchema.js +77 -0
- package/dist/MultiLinearWiggleDisplay/models/configSchema.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/models/model.d.ts +339 -0
- package/dist/MultiLinearWiggleDisplay/models/model.js +675 -0
- package/dist/MultiLinearWiggleDisplay/models/model.js.map +1 -0
- package/dist/MultiQuantitativeTrack/index.d.ts +3 -0
- package/dist/MultiQuantitativeTrack/index.js +19 -0
- package/dist/MultiQuantitativeTrack/index.js.map +1 -0
- package/dist/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +7 -0
- package/dist/MultiRowLineRenderer/MultiRowLineRenderer.js +131 -0
- package/dist/MultiRowLineRenderer/MultiRowLineRenderer.js.map +1 -0
- package/dist/MultiRowLineRenderer/configSchema.d.ts +2 -0
- package/dist/MultiRowLineRenderer/configSchema.js +23 -0
- package/dist/MultiRowLineRenderer/configSchema.js.map +1 -0
- package/dist/MultiRowLineRenderer/index.d.ts +3 -0
- package/dist/MultiRowLineRenderer/index.js +19 -0
- package/dist/MultiRowLineRenderer/index.js.map +1 -0
- package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +7 -0
- package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +164 -0
- package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js.map +1 -0
- package/dist/MultiRowXYPlotRenderer/configSchema.d.ts +2 -0
- package/dist/MultiRowXYPlotRenderer/configSchema.js +31 -0
- package/dist/MultiRowXYPlotRenderer/configSchema.js.map +1 -0
- package/dist/MultiRowXYPlotRenderer/index.d.ts +3 -0
- package/dist/MultiRowXYPlotRenderer/index.js +19 -0
- package/dist/MultiRowXYPlotRenderer/index.js.map +1 -0
- package/dist/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +28 -0
- package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js +244 -0
- package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js.map +1 -0
- package/dist/MultiWiggleAdapter/configSchema.d.ts +2 -0
- package/dist/MultiWiggleAdapter/configSchema.js +14 -0
- package/dist/MultiWiggleAdapter/configSchema.js.map +1 -0
- package/dist/MultiWiggleAdapter/index.d.ts +3 -0
- package/dist/MultiWiggleAdapter/index.js +47 -0
- package/dist/MultiWiggleAdapter/index.js.map +1 -0
- package/dist/MultiWiggleAddTrackWidget/AddTrackWorkflow.d.ts +5 -0
- package/dist/MultiWiggleAddTrackWidget/AddTrackWorkflow.js +139 -0
- package/dist/MultiWiggleAddTrackWidget/AddTrackWorkflow.js.map +1 -0
- package/dist/MultiWiggleAddTrackWidget/index.d.ts +3 -0
- package/dist/MultiWiggleAddTrackWidget/index.js +19 -0
- package/dist/MultiWiggleAddTrackWidget/index.js.map +1 -0
- package/dist/MultiWiggleRendering.d.ts +21 -0
- package/dist/MultiWiggleRendering.js +164 -0
- package/dist/MultiWiggleRendering.js.map +1 -0
- package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +7 -0
- package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.js +153 -0
- package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.js.map +1 -0
- package/dist/MultiXYPlotRenderer/configSchema.d.ts +2 -0
- package/dist/MultiXYPlotRenderer/configSchema.js +31 -0
- package/dist/MultiXYPlotRenderer/configSchema.js.map +1 -0
- package/dist/MultiXYPlotRenderer/index.d.ts +3 -0
- package/dist/MultiXYPlotRenderer/index.js +19 -0
- package/dist/MultiXYPlotRenderer/index.js.map +1 -0
- package/dist/QuantitativeTrack/index.d.ts +3 -0
- package/dist/QuantitativeTrack/index.js +19 -0
- package/dist/QuantitativeTrack/index.js.map +1 -0
- package/dist/Tooltip.d.ts +20 -0
- package/dist/Tooltip.js +124 -0
- package/dist/Tooltip.js.map +1 -0
- package/dist/WiggleBaseRenderer.d.ts +11 -12
- package/dist/WiggleBaseRenderer.js +132 -129
- package/dist/WiggleBaseRenderer.js.map +1 -0
- package/dist/WiggleRPC/rpcMethods.d.ts +17 -1
- package/dist/WiggleRPC/rpcMethods.js +258 -289
- package/dist/WiggleRPC/rpcMethods.js.map +1 -0
- package/dist/WiggleRendering.d.ts +1 -1
- package/dist/WiggleRendering.js +103 -102
- package/dist/WiggleRendering.js.map +1 -0
- package/dist/XYPlotRenderer/XYPlotRenderer.d.ts +4 -1
- package/dist/XYPlotRenderer/XYPlotRenderer.js +147 -194
- package/dist/XYPlotRenderer/XYPlotRenderer.js.map +1 -0
- package/dist/XYPlotRenderer/configSchema.d.ts +2 -0
- package/dist/XYPlotRenderer/configSchema.js +31 -0
- package/dist/XYPlotRenderer/configSchema.js.map +1 -0
- package/dist/XYPlotRenderer/index.d.ts +7 -3
- package/dist/XYPlotRenderer/index.js +21 -32
- package/dist/XYPlotRenderer/index.js.map +1 -0
- package/dist/configSchema.js +42 -74
- package/dist/configSchema.js.map +1 -0
- package/dist/drawxy.d.ts +50 -0
- package/dist/drawxy.js +411 -0
- package/dist/drawxy.js.map +1 -0
- package/dist/index.d.ts +194 -85
- package/dist/index.js +139 -247
- package/dist/index.js.map +1 -0
- package/dist/util.d.ts +34 -1
- package/dist/util.js +270 -143
- package/dist/util.js.map +1 -0
- package/esm/BigWigAdapter/BigWigAdapter.d.ts +25 -0
- package/esm/BigWigAdapter/BigWigAdapter.js +81 -0
- package/esm/BigWigAdapter/BigWigAdapter.js.map +1 -0
- package/esm/BigWigAdapter/configSchema.d.ts +2 -0
- package/esm/BigWigAdapter/configSchema.js +16 -0
- package/esm/BigWigAdapter/configSchema.js.map +1 -0
- package/esm/BigWigAdapter/index.d.ts +3 -0
- package/esm/BigWigAdapter/index.js +15 -0
- package/esm/BigWigAdapter/index.js.map +1 -0
- package/esm/CreateMultiWiggleExtension/ConfirmDialog.d.ts +9 -0
- package/esm/CreateMultiWiggleExtension/ConfirmDialog.js +26 -0
- package/esm/CreateMultiWiggleExtension/ConfirmDialog.js.map +1 -0
- package/esm/CreateMultiWiggleExtension/index.d.ts +2 -0
- package/esm/CreateMultiWiggleExtension/index.js +51 -0
- package/esm/CreateMultiWiggleExtension/index.js.map +1 -0
- package/esm/DensityRenderer/DensityRenderer.d.ts +6 -0
- package/esm/DensityRenderer/DensityRenderer.js +8 -0
- package/esm/DensityRenderer/DensityRenderer.js.map +1 -0
- package/esm/DensityRenderer/configSchema.d.ts +2 -0
- package/esm/DensityRenderer/configSchema.js +5 -0
- package/esm/DensityRenderer/configSchema.js.map +1 -0
- package/esm/DensityRenderer/index.d.ts +3 -0
- package/esm/DensityRenderer/index.js +12 -0
- package/esm/DensityRenderer/index.js.map +1 -0
- package/esm/LinePlotRenderer/LinePlotRenderer.d.ts +6 -0
- package/esm/LinePlotRenderer/LinePlotRenderer.js +13 -0
- package/esm/LinePlotRenderer/LinePlotRenderer.js.map +1 -0
- package/esm/LinePlotRenderer/configSchema.d.ts +2 -0
- package/esm/LinePlotRenderer/configSchema.js +11 -0
- package/esm/LinePlotRenderer/configSchema.js.map +1 -0
- package/esm/LinePlotRenderer/index.d.ts +3 -0
- package/esm/LinePlotRenderer/index.js +12 -0
- package/esm/LinePlotRenderer/index.js.map +1 -0
- package/esm/LinearWiggleDisplay/components/SetColorDialog.d.ts +14 -0
- package/esm/LinearWiggleDisplay/components/SetColorDialog.js +48 -0
- package/esm/LinearWiggleDisplay/components/SetColorDialog.js.map +1 -0
- package/esm/LinearWiggleDisplay/components/SetMinMaxDialog.d.ts +11 -0
- package/esm/LinearWiggleDisplay/components/SetMinMaxDialog.js +46 -0
- package/esm/LinearWiggleDisplay/components/SetMinMaxDialog.js.map +1 -0
- package/esm/LinearWiggleDisplay/components/Tooltip.d.ts +19 -0
- package/esm/LinearWiggleDisplay/components/Tooltip.js +34 -0
- package/esm/LinearWiggleDisplay/components/Tooltip.js.map +1 -0
- package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +8 -0
- package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.js +29 -0
- package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.js.map +1 -0
- package/esm/LinearWiggleDisplay/components/YScaleBar.d.ts +7 -0
- package/esm/LinearWiggleDisplay/components/YScaleBar.js +9 -0
- package/esm/LinearWiggleDisplay/components/YScaleBar.js.map +1 -0
- package/esm/LinearWiggleDisplay/index.d.ts +7 -0
- package/esm/LinearWiggleDisplay/index.js +21 -0
- package/esm/LinearWiggleDisplay/index.js.map +1 -0
- package/esm/LinearWiggleDisplay/models/configSchema.d.ts +2 -0
- package/esm/LinearWiggleDisplay/models/configSchema.js +64 -0
- package/esm/LinearWiggleDisplay/models/configSchema.js.map +1 -0
- package/esm/LinearWiggleDisplay/models/model.d.ts +309 -0
- package/esm/LinearWiggleDisplay/models/model.js +449 -0
- package/esm/LinearWiggleDisplay/models/model.js.map +1 -0
- package/esm/MultiDensityRenderer/MultiDensityRenderer.d.ts +7 -0
- package/esm/MultiDensityRenderer/MultiDensityRenderer.js +36 -0
- package/esm/MultiDensityRenderer/MultiDensityRenderer.js.map +1 -0
- package/esm/MultiDensityRenderer/configSchema.d.ts +2 -0
- package/esm/MultiDensityRenderer/configSchema.js +5 -0
- package/esm/MultiDensityRenderer/configSchema.js.map +1 -0
- package/esm/MultiDensityRenderer/index.d.ts +3 -0
- package/esm/MultiDensityRenderer/index.js +12 -0
- package/esm/MultiDensityRenderer/index.js.map +1 -0
- package/esm/MultiLineRenderer/MultiLineRenderer.d.ts +7 -0
- package/esm/MultiLineRenderer/MultiLineRenderer.js +25 -0
- package/esm/MultiLineRenderer/MultiLineRenderer.js.map +1 -0
- package/esm/MultiLineRenderer/configSchema.d.ts +2 -0
- package/esm/MultiLineRenderer/configSchema.js +18 -0
- package/esm/MultiLineRenderer/configSchema.js.map +1 -0
- package/esm/MultiLineRenderer/index.d.ts +3 -0
- package/esm/MultiLineRenderer/index.js +12 -0
- package/esm/MultiLineRenderer/index.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +10 -0
- package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js +162 -0
- package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/components/SetMinMaxDialog.d.ts +11 -0
- package/esm/MultiLinearWiggleDisplay/components/SetMinMaxDialog.js +46 -0
- package/esm/MultiLinearWiggleDisplay/components/SetMinMaxDialog.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/components/Tooltip.d.ts +25 -0
- package/esm/MultiLinearWiggleDisplay/components/Tooltip.js +43 -0
- package/esm/MultiLinearWiggleDisplay/components/Tooltip.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +13 -0
- package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js +99 -0
- package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/components/YScaleBar.d.ts +7 -0
- package/esm/MultiLinearWiggleDisplay/components/YScaleBar.js +9 -0
- package/esm/MultiLinearWiggleDisplay/components/YScaleBar.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/components/util.d.ts +10 -0
- package/esm/MultiLinearWiggleDisplay/components/util.js +31 -0
- package/esm/MultiLinearWiggleDisplay/components/util.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/index.d.ts +3 -0
- package/esm/MultiLinearWiggleDisplay/index.js +18 -0
- package/esm/MultiLinearWiggleDisplay/index.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/models/configSchema.d.ts +2 -0
- package/esm/MultiLinearWiggleDisplay/models/configSchema.js +74 -0
- package/esm/MultiLinearWiggleDisplay/models/configSchema.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/models/model.d.ts +339 -0
- package/esm/MultiLinearWiggleDisplay/models/model.js +570 -0
- package/esm/MultiLinearWiggleDisplay/models/model.js.map +1 -0
- package/esm/MultiQuantitativeTrack/index.d.ts +3 -0
- package/esm/MultiQuantitativeTrack/index.js +14 -0
- package/esm/MultiQuantitativeTrack/index.js.map +1 -0
- package/esm/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +7 -0
- package/esm/MultiRowLineRenderer/MultiRowLineRenderer.js +33 -0
- package/esm/MultiRowLineRenderer/MultiRowLineRenderer.js.map +1 -0
- package/esm/MultiRowLineRenderer/configSchema.d.ts +2 -0
- package/esm/MultiRowLineRenderer/configSchema.js +18 -0
- package/esm/MultiRowLineRenderer/configSchema.js.map +1 -0
- package/esm/MultiRowLineRenderer/index.d.ts +3 -0
- package/esm/MultiRowLineRenderer/index.js +12 -0
- package/esm/MultiRowLineRenderer/index.js.map +1 -0
- package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +7 -0
- package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +39 -0
- package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js.map +1 -0
- package/esm/MultiRowXYPlotRenderer/configSchema.d.ts +2 -0
- package/esm/MultiRowXYPlotRenderer/configSchema.js +26 -0
- package/esm/MultiRowXYPlotRenderer/configSchema.js.map +1 -0
- package/esm/MultiRowXYPlotRenderer/index.d.ts +3 -0
- package/esm/MultiRowXYPlotRenderer/index.js +12 -0
- package/esm/MultiRowXYPlotRenderer/index.js.map +1 -0
- package/esm/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +28 -0
- package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js +87 -0
- package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js.map +1 -0
- package/esm/MultiWiggleAdapter/configSchema.d.ts +2 -0
- package/esm/MultiWiggleAdapter/configSchema.js +12 -0
- package/esm/MultiWiggleAdapter/configSchema.js.map +1 -0
- package/esm/MultiWiggleAdapter/index.d.ts +3 -0
- package/esm/MultiWiggleAdapter/index.js +15 -0
- package/esm/MultiWiggleAdapter/index.js.map +1 -0
- package/esm/MultiWiggleAddTrackWidget/AddTrackWorkflow.d.ts +5 -0
- package/esm/MultiWiggleAddTrackWidget/AddTrackWorkflow.js +87 -0
- package/esm/MultiWiggleAddTrackWidget/AddTrackWorkflow.js.map +1 -0
- package/esm/MultiWiggleAddTrackWidget/index.d.ts +3 -0
- package/esm/MultiWiggleAddTrackWidget/index.js +12 -0
- package/esm/MultiWiggleAddTrackWidget/index.js.map +1 -0
- package/esm/MultiWiggleRendering.d.ts +21 -0
- package/esm/MultiWiggleRendering.js +75 -0
- package/esm/MultiWiggleRendering.js.map +1 -0
- package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +7 -0
- package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.js +28 -0
- package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.js.map +1 -0
- package/esm/MultiXYPlotRenderer/configSchema.d.ts +2 -0
- package/esm/MultiXYPlotRenderer/configSchema.js +26 -0
- package/esm/MultiXYPlotRenderer/configSchema.js.map +1 -0
- package/esm/MultiXYPlotRenderer/index.d.ts +3 -0
- package/esm/MultiXYPlotRenderer/index.js +12 -0
- package/esm/MultiXYPlotRenderer/index.js.map +1 -0
- package/esm/QuantitativeTrack/index.d.ts +3 -0
- package/esm/QuantitativeTrack/index.js +14 -0
- package/esm/QuantitativeTrack/index.js.map +1 -0
- package/esm/Tooltip.d.ts +20 -0
- package/esm/Tooltip.js +71 -0
- package/esm/Tooltip.js.map +1 -0
- package/esm/WiggleBaseRenderer.d.ts +54 -0
- package/esm/WiggleBaseRenderer.js +36 -0
- package/esm/WiggleBaseRenderer.js.map +1 -0
- package/esm/WiggleRPC/rpcMethods.d.ts +47 -0
- package/esm/WiggleRPC/rpcMethods.js +112 -0
- package/esm/WiggleRPC/rpcMethods.js.map +1 -0
- package/esm/WiggleRendering.d.ts +16 -0
- package/esm/WiggleRendering.js +36 -0
- package/esm/WiggleRendering.js.map +1 -0
- package/esm/XYPlotRenderer/XYPlotRenderer.d.ts +7 -0
- package/esm/XYPlotRenderer/XYPlotRenderer.js +26 -0
- package/esm/XYPlotRenderer/XYPlotRenderer.js.map +1 -0
- package/esm/XYPlotRenderer/configSchema.d.ts +2 -0
- package/esm/XYPlotRenderer/configSchema.js +26 -0
- package/esm/XYPlotRenderer/configSchema.js.map +1 -0
- package/esm/XYPlotRenderer/index.d.ts +7 -0
- package/esm/XYPlotRenderer/index.js +13 -0
- package/esm/XYPlotRenderer/index.js.map +1 -0
- package/esm/configSchema.d.ts +2 -0
- package/esm/configSchema.js +41 -0
- package/esm/configSchema.js.map +1 -0
- package/esm/drawxy.d.ts +50 -0
- package/esm/drawxy.js +286 -0
- package/esm/drawxy.js.map +1 -0
- package/esm/index.d.ts +975 -0
- package/esm/index.js +90 -0
- package/esm/index.js.map +1 -0
- package/esm/util.d.ts +74 -0
- package/esm/util.js +231 -0
- package/esm/util.js.map +1 -0
- package/package.json +32 -18
- package/src/BigWigAdapter/BigWigAdapter.ts +53 -35
- package/src/BigWigAdapter/__snapshots__/BigWigAdapter.test.ts.snap +10 -10
- package/src/BigWigAdapter/configSchema.ts +5 -0
- package/src/BigWigAdapter/index.ts +19 -1
- package/src/CreateMultiWiggleExtension/ConfirmDialog.tsx +66 -0
- package/src/CreateMultiWiggleExtension/index.ts +57 -0
- package/src/DensityRenderer/DensityRenderer.test.js +8 -2
- package/src/DensityRenderer/DensityRenderer.ts +14 -0
- package/src/DensityRenderer/__snapshots__/DensityRenderer.test.js.snap +8 -0
- package/src/{LinePlotRenderer/index.js → DensityRenderer/configSchema.ts} +5 -5
- package/src/DensityRenderer/index.ts +14 -53
- package/src/LinePlotRenderer/LinePlotRenderer.ts +19 -0
- package/src/LinePlotRenderer/configSchema.ts +16 -0
- package/src/LinePlotRenderer/index.ts +16 -0
- package/src/LinearWiggleDisplay/components/SetColorDialog.tsx +26 -31
- package/src/LinearWiggleDisplay/components/SetMinMaxDialog.tsx +13 -11
- package/src/LinearWiggleDisplay/components/Tooltip.tsx +6 -121
- package/src/LinearWiggleDisplay/components/WiggleDisplayComponent.tsx +9 -4
- package/src/LinearWiggleDisplay/index.ts +24 -3
- package/src/LinearWiggleDisplay/models/model.tsx +139 -224
- package/src/MultiDensityRenderer/MultiDensityRenderer.ts +39 -0
- package/src/MultiDensityRenderer/configSchema.ts +10 -0
- package/src/MultiDensityRenderer/index.ts +16 -0
- package/src/MultiLineRenderer/MultiLineRenderer.ts +29 -0
- package/src/MultiLineRenderer/configSchema.ts +24 -0
- package/src/MultiLineRenderer/index.ts +17 -0
- package/src/MultiLinearWiggleDisplay/components/SetColorDialog.tsx +322 -0
- package/src/MultiLinearWiggleDisplay/components/SetMinMaxDialog.tsx +113 -0
- package/src/MultiLinearWiggleDisplay/components/Tooltip.tsx +76 -0
- package/src/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.tsx +261 -0
- package/src/MultiLinearWiggleDisplay/components/YScaleBar.tsx +25 -0
- package/src/MultiLinearWiggleDisplay/components/declare.d.ts +1 -0
- package/src/MultiLinearWiggleDisplay/components/util.test.ts +69 -0
- package/src/MultiLinearWiggleDisplay/components/util.ts +33 -0
- package/src/MultiLinearWiggleDisplay/index.ts +20 -0
- package/src/MultiLinearWiggleDisplay/models/configSchema.ts +94 -0
- package/src/MultiLinearWiggleDisplay/models/model.tsx +721 -0
- package/src/MultiQuantitativeTrack/index.ts +26 -0
- package/src/MultiRowLineRenderer/MultiRowLineRenderer.ts +36 -0
- package/src/MultiRowLineRenderer/configSchema.ts +25 -0
- package/src/MultiRowLineRenderer/index.ts +16 -0
- package/src/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.ts +43 -0
- package/src/MultiRowXYPlotRenderer/configSchema.ts +33 -0
- package/src/MultiRowXYPlotRenderer/index.ts +16 -0
- package/src/MultiWiggleAdapter/MultiWiggleAdapter.ts +120 -0
- package/src/MultiWiggleAdapter/configSchema.ts +16 -0
- package/src/MultiWiggleAdapter/index.ts +20 -0
- package/src/MultiWiggleAdapter/test_data/volvox.bw +0 -0
- package/src/MultiWiggleAddTrackWidget/AddTrackWorkflow.tsx +130 -0
- package/src/MultiWiggleAddTrackWidget/index.ts +17 -0
- package/src/MultiWiggleRendering.tsx +125 -0
- package/src/MultiXYPlotRenderer/MultiXYPlotRenderer.ts +32 -0
- package/src/MultiXYPlotRenderer/configSchema.ts +31 -0
- package/src/MultiXYPlotRenderer/index.ts +17 -0
- package/src/QuantitativeTrack/index.ts +26 -0
- package/src/Tooltip.tsx +123 -0
- package/src/WiggleBaseRenderer.tsx +17 -11
- package/src/WiggleRPC/rpcMethods.ts +68 -17
- package/src/WiggleRendering.tsx +12 -18
- package/src/XYPlotRenderer/XYPlotRenderer.test.js +3 -1
- package/src/XYPlotRenderer/XYPlotRenderer.ts +19 -124
- package/src/XYPlotRenderer/__snapshots__/XYPlotRenderer.test.js.snap +8 -0
- package/src/XYPlotRenderer/configSchema.ts +32 -0
- package/src/XYPlotRenderer/index.ts +16 -10
- package/src/__snapshots__/WiggleRendering.test.js.snap +0 -2
- package/src/configSchema.ts +0 -28
- package/src/declare.d.ts +0 -1
- package/src/drawxy.ts +387 -0
- package/src/index.ts +75 -129
- package/src/util.ts +174 -0
- package/dist/BigWigAdapter/BigWigAdapter.test.js +0 -157
- package/dist/DensityRenderer/DensityRenderer.test.js +0 -88
- package/dist/WiggleRendering.test.js +0 -52
- package/dist/XYPlotRenderer/XYPlotRenderer.test.js +0 -87
- package/dist/declare.d.js +0 -1
- package/dist/index.test.js +0 -24
- package/dist/util.test.js +0 -66
- package/src/LinePlotRenderer/LinePlotRenderer.js +0 -91
- package/src/LinePlotRenderer/configSchema.js +0 -68
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/// <reference types="react" />
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import { AnyConfigurationModel } from '@jbrowse/core/configuration';
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declare const ConfirmDialog: ({ tracks, onClose, }: {
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tracks: AnyConfigurationModel[];
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export default ConfirmDialog;
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Object.defineProperty(exports, "__esModule", { value: true });
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var react_1 = __importStar(require("react"));
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var material_1 = require("@mui/material");
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var configuration_1 = require("@jbrowse/core/configuration");
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var ConfirmDialog = function (_a) {
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var tracks = _a.tracks, onClose = _a.onClose;
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var _b = __read((0, react_1.useState)('MultiWiggle ' + Date.now()), 2), val = _b[0], setVal = _b[1];
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var allQuant = tracks.every(function (t) { return t.type === 'QuantitativeTrack'; });
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return (react_1.default.createElement(material_1.Dialog, { open: true, onClose: function () { return onClose(false); } },
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react_1.default.createElement(material_1.DialogTitle, null, "Confirm multi-wiggle track create"),
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react_1.default.createElement(material_1.DialogContent, null,
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react_1.default.createElement(material_1.Typography, null,
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!allQuant
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? 'Not every track looks like a QuantitativeTrack. This could have unexpected behavior, confirm if it looks ok.'
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: null,
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"Listing:"),
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react_1.default.createElement("ul", null, tracks.map(function (track) { return (react_1.default.createElement("li", { key: track.trackId },
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(0, configuration_1.readConfObject)(track, 'name'),
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" - ",
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track.type)); })),
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react_1.default.createElement(material_1.TextField, { value: val, onChange: function (event) { return setVal(event.target.value); }, helperText: "Track name" }),
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react_1.default.createElement(material_1.Typography, null, "Confirm creation of track?")),
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react_1.default.createElement(material_1.DialogActions, null,
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react_1.default.createElement(material_1.Button, { onClick: function () { return onClose(false); }, color: "primary" }, "Cancel"),
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react_1.default.createElement(material_1.Button, { onClick: function () { return onClose(true, { name: val }); }, color: "primary", variant: "contained", autoFocus: true }, "Submit"))));
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};
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exports.default = ConfirmDialog;
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//# sourceMappingURL=ConfirmDialog.js.map
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{"version":3,"file":"ConfirmDialog.js","sourceRoot":"","sources":["../../src/CreateMultiWiggleExtension/ConfirmDialog.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,6CAAuC;AACvC,0CAQsB;AACtB,6DAGoC;AAEpC,IAAM,aAAa,GAAG,UAAC,EAMtB;QALC,MAAM,YAAA,EACN,OAAO,aAAA;IAKD,IAAA,KAAA,OAAgB,IAAA,gBAAQ,EAAC,cAAc,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,IAAA,EAApD,GAAG,QAAA,EAAE,MAAM,QAAyC,CAAA;IAC3D,IAAM,QAAQ,GAAG,MAAM,CAAC,KAAK,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,IAAI,KAAK,mBAAmB,EAA9B,CAA8B,CAAC,CAAA;IAClE,OAAO,CACL,8BAAC,iBAAM,IAAC,IAAI,QAAC,OAAO,EAAE,cAAM,OAAA,OAAO,CAAC,KAAK,CAAC,EAAd,CAAc;QACxC,8BAAC,sBAAW,4CAAgD;QAC5D,8BAAC,wBAAa;YACZ,8BAAC,qBAAU;gBACR,CAAC,QAAQ;oBACR,CAAC,CAAC,8GAA8G;oBAChH,CAAC,CAAC,IAAI;2BAEG;YACb,0CACG,MAAM,CAAC,GAAG,CAAC,UAAA,KAAK,IAAI,OAAA,CACnB,sCAAI,GAAG,EAAE,KAAK,CAAC,OAAO;gBACnB,IAAA,8BAAc,EAAC,KAAK,EAAE,MAAM,CAAC;;gBAAK,KAAK,CAAC,IAAI,CAC1C,CACN,EAJoB,CAIpB,CAAC,CACC;YACL,8BAAC,oBAAS,IACR,KAAK,EAAE,GAAG,EACV,QAAQ,EAAE,UAAA,KAAK,IAAI,OAAA,MAAM,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,EAA1B,CAA0B,EAC7C,UAAU,EAAC,YAAY,GACvB;YACF,8BAAC,qBAAU,qCAAwC,CACrC;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IAAC,OAAO,EAAE,cAAM,OAAA,OAAO,CAAC,KAAK,CAAC,EAAd,CAAc,EAAE,KAAK,EAAC,SAAS,aAE7C;YACT,8BAAC,iBAAM,IACL,OAAO,EAAE,cAAM,OAAA,OAAO,CAAC,IAAI,EAAE,EAAE,IAAI,EAAE,GAAG,EAAE,CAAC,EAA5B,CAA4B,EAC3C,KAAK,EAAC,SAAS,EACf,OAAO,EAAC,WAAW,EACnB,SAAS,mBAGF,CACK,CACT,CACV,CAAA;AACH,CAAC,CAAA;AAED,kBAAe,aAAa,CAAA"}
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var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
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};
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var __spreadArray = (this && this.__spreadArray) || function (to, from, pack) {
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};
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var react_1 = require("react");
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var configuration_1 = require("@jbrowse/core/configuration");
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var util_1 = require("@jbrowse/core/util");
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var ConfirmDialog = (0, react_1.lazy)(function () { return Promise.resolve().then(function () { return __importStar(require('./ConfirmDialog')); }); });
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function default_1(pm) {
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pm.addToExtensionPoint('TrackSelector-multiTrackMenuItems', function () {
|
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return [
|
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{
|
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label: 'Create multi-wiggle track',
|
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onClick: function (model) {
|
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var tracks = model.selection;
|
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var trackIds = tracks.map(function (c) { return (0, configuration_1.readConfObject)(c, 'name'); });
|
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74
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function makeTrack(arg) {
|
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75
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var subadapters = tracks
|
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.map(function (c) { return (0, configuration_1.readConfObject)(c, 'adapter'); })
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.map(function (c, idx) { return (__assign(__assign({}, c), { source: trackIds[idx] })); });
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var assemblyNames = __spreadArray([], __read(new Set(tracks.map(function (c) { return (0, configuration_1.readConfObject)(c, 'assemblyNames'); }).flat())), false);
|
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var now = +Date.now();
|
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+
var trackId = "multitrack-".concat(now, "-sessionTrack");
|
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(0, util_1.getSession)(model).addTrackConf({
|
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type: 'MultiQuantitativeTrack',
|
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trackId: trackId,
|
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name: arg.name,
|
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assemblyNames: assemblyNames,
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adapter: {
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type: 'MultiWiggleAdapter',
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subadapters: subadapters,
|
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},
|
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90
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+
});
|
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91
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+
model.view.showTrack(trackId);
|
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92
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+
}
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93
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(0, util_1.getSession)(model).queueDialog(function (handleClose) { return [
|
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94
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ConfirmDialog,
|
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95
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{
|
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96
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tracks: tracks,
|
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onClose: function (arg, arg1) {
|
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98
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+
if (arg) {
|
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makeTrack(arg1);
|
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100
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}
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handleClose();
|
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},
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{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/CreateMultiWiggleExtension/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+BAA4B;AAE5B,6DAA4D;AAC5D,2CAA+C;AAG/C,IAAM,aAAa,GAAG,IAAA,YAAI,EAAC,cAAM,wEAAO,iBAAiB,QAAxB,CAAyB,CAAC,CAAA;AAE3D,mBAAyB,EAAiB;IACxC,EAAE,CAAC,mBAAmB,CAAC,mCAAmC,EAAE;QAC1D,OAAO;YACL;gBACE,KAAK,EAAE,2BAA2B;gBAClC,OAAO,EAAE,UAAC,KAAqC;oBAC7C,IAAM,MAAM,GAAG,KAAK,CAAC,SAAS,CAAA;oBAC9B,IAAM,QAAQ,GAAG,MAAM,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,IAAA,8BAAc,EAAC,CAAC,EAAE,MAAM,CAAC,EAAzB,CAAyB,CAAC,CAAA;oBAC3D,SAAS,SAAS,CAAC,GAAqB;wBACtC,IAAM,WAAW,GAAG,MAAM;6BACvB,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,IAAA,8BAAc,EAAC,CAAC,EAAE,SAAS,CAAC,EAA5B,CAA4B,CAAC;6BACtC,GAAG,CAAC,UAAC,CAAC,EAAE,GAAG,IAAK,OAAA,uBAAM,CAAC,KAAE,MAAM,EAAE,QAAQ,CAAC,GAAG,CAAC,IAAG,EAAjC,CAAiC,CAAC,CAAA;wBACrD,IAAM,aAAa,4BACd,IAAI,GAAG,CACR,MAAM,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,IAAA,8BAAc,EAAC,CAAC,EAAE,eAAe,CAAC,EAAlC,CAAkC,CAAC,CAAC,IAAI,EAAE,CAC3D,SACF,CAAA;wBACD,IAAM,GAAG,GAAG,CAAC,IAAI,CAAC,GAAG,EAAE,CAAA;wBACvB,IAAM,OAAO,GAAG,qBAAc,GAAG,kBAAe,CAAA;wBAEhD,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAC,YAAY,CAAC;4BAC7B,IAAI,EAAE,wBAAwB;4BAC9B,OAAO,SAAA;4BACP,IAAI,EAAE,GAAG,CAAC,IAAI;4BACd,aAAa,eAAA;4BACb,OAAO,EAAE;gCACP,IAAI,EAAE,oBAAoB;gCAC1B,WAAW,aAAA;6BACZ;yBACF,CAAC,CAAA;wBACF,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,OAAO,CAAC,CAAA;oBAC/B,CAAC;oBACD,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAC,WAAW,CAAC,UAAA,WAAW,IAAI,OAAA;wBAC3C,aAAa;wBACb;4BACE,MAAM,QAAA;4BACN,OAAO,EAAE,UAAC,GAAY,EAAE,IAAsB;gCAC5C,IAAI,GAAG,EAAE;oCACP,SAAS,CAAC,IAAI,CAAC,CAAA;iCAChB;gCACD,WAAW,EAAE,CAAA;4BACf,CAAC;yBACF;qBACF,EAX4C,CAW5C,CAAC,CAAA;gBACJ,CAAC;aACF;SACF,CAAA;IACH,CAAC,CAAC,CAAA;AACJ,CAAC;AAhDD,4BAgDC"}
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import WiggleBaseRenderer, { RenderArgsDeserializedWithFeatures } from '../WiggleBaseRenderer';
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export default class DensityRenderer extends WiggleBaseRenderer {
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{"version":3,"file":"DensityRenderer.js","sourceRoot":"","sources":["../../src/DensityRenderer/DensityRenderer.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,oCAAuC;AAEvC,6EAE8B;AAE9B;IAA6C,mCAAkB;IAA/D;;IAOA,CAAC;IANO,8BAAI,GAAV,UACE,GAA6B,EAC7B,KAAyC;;;gBAEzC,sBAAO,IAAA,oBAAW,EAAC,GAAG,EAAE,KAAK,CAAC,EAAA;;;KAC/B;IACH,sBAAC;AAAD,CAAC,AAPD,CAA6C,4BAAkB,GAO9D"}
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var configSchema = (0, configuration_1.ConfigurationSchema)('DensityRenderer', {}, { baseConfiguration: configSchema_1.default, explicitlyTyped: true });
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{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/DensityRenderer/configSchema.ts"],"names":[],"mappings":";;;;;AAAA,6DAAiE;AAEjE,iEAA0C;AAE1C,IAAM,YAAY,GAAG,IAAA,mCAAmB,EACtC,iBAAiB,EACjB,EAAE,EACF,EAAE,iBAAiB,EAAE,sBAAY,EAAE,eAAe,EAAE,IAAI,EAAE,CAC3D,CAAA;AAED,kBAAe,YAAY,CAAA"}
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draw(ctx: CanvasRenderingContext2D, props: RenderArgsDeserializedWithFeatures): void;
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}
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export declare const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
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|
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var DensityRenderer_1 = __importDefault(require("./DensityRenderer"));
|
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var WiggleRendering_1 = __importDefault(require("../WiggleRendering"));
|
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|
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exports.default = (function (pluginManager) {
|
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|
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pluginManager.addRendererType(function () {
|
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|
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return new DensityRenderer_1.default({
|
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name: 'DensityRenderer',
|
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ReactComponent: WiggleRendering_1.default,
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|
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|
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}
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});
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function _createForOfIteratorHelper(o, allowArrayLike) { var it = typeof Symbol !== "undefined" && o[Symbol.iterator] || o["@@iterator"]; if (!it) { if (Array.isArray(o) || (it = _unsupportedIterableToArray(o)) || allowArrayLike && o && typeof o.length === "number") { if (it) o = it; var i = 0; var F = function F() {}; return { s: F, n: function n() { if (i >= o.length) return { done: true }; return { done: false, value: o[i++] }; }, e: function e(_e) { throw _e; }, f: F }; } throw new TypeError("Invalid attempt to iterate non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method."); } var normalCompletion = true, didErr = false, err; return { s: function s() { it = it.call(o); }, n: function n() { var step = it.next(); normalCompletion = step.done; return step; }, e: function e(_e2) { didErr = true; err = _e2; }, f: function f() { try { if (!normalCompletion && it.return != null) it.return(); } finally { if (didErr) throw err; } } }; }
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function _unsupportedIterableToArray(o, minLen) { if (!o) return; if (typeof o === "string") return _arrayLikeToArray(o, minLen); var n = Object.prototype.toString.call(o).slice(8, -1); if (n === "Object" && o.constructor) n = o.constructor.name; if (n === "Map" || n === "Set") return Array.from(o); if (n === "Arguments" || /^(?:Ui|I)nt(?:8|16|32)(?:Clamped)?Array$/.test(n)) return _arrayLikeToArray(o, minLen); }
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function _arrayLikeToArray(arr, len) { if (len == null || len > arr.length) len = arr.length; for (var i = 0, arr2 = new Array(len); i < len; i++) { arr2[i] = arr[i]; } return arr2; }
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function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
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function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
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function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2.default)(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2.default)(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2.default)(this, result); }; }
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function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }
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|
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bpPerPx = props.bpPerPx,
|
|
72
|
-
scaleOpts = props.scaleOpts,
|
|
73
|
-
height = props.height,
|
|
74
|
-
config = props.config;
|
|
75
|
-
|
|
76
|
-
var _regions = (0, _slicedToArray2.default)(regions, 1),
|
|
77
|
-
region = _regions[0];
|
|
78
|
-
|
|
79
|
-
var pivot = (0, _configuration.readConfObject)(config, 'bicolorPivot');
|
|
80
|
-
var pivotValue = (0, _configuration.readConfObject)(config, 'bicolorPivotValue');
|
|
81
|
-
var negColor = (0, _configuration.readConfObject)(config, 'negColor');
|
|
82
|
-
var posColor = (0, _configuration.readConfObject)(config, 'posColor');
|
|
83
|
-
var color = (0, _configuration.readConfObject)(config, 'color');
|
|
84
|
-
var colorCallback;
|
|
85
|
-
|
|
86
|
-
if (color === '#f0f') {
|
|
87
|
-
var colorScale = pivot !== 'none' ? (0, _util2.getScale)(_objectSpread(_objectSpread({}, scaleOpts), {}, {
|
|
88
|
-
pivotValue: pivotValue,
|
|
89
|
-
range: [negColor, 'white', posColor]
|
|
90
|
-
})) : (0, _util2.getScale)(_objectSpread(_objectSpread({}, scaleOpts), {}, {
|
|
91
|
-
range: ['white', posColor]
|
|
92
|
-
}));
|
|
93
|
-
|
|
94
|
-
colorCallback = function colorCallback(feature) {
|
|
95
|
-
return colorScale(feature.get('score'));
|
|
96
|
-
};
|
|
97
|
-
} else {
|
|
98
|
-
colorCallback = function colorCallback(feature) {
|
|
99
|
-
return (0, _configuration.readConfObject)(config, 'color', {
|
|
100
|
-
feature: feature
|
|
101
|
-
});
|
|
102
|
-
};
|
|
103
|
-
}
|
|
104
|
-
|
|
105
|
-
var _iterator = _createForOfIteratorHelper(features.values()),
|
|
106
|
-
_step;
|
|
107
|
-
|
|
108
|
-
try {
|
|
109
|
-
for (_iterator.s(); !(_step = _iterator.n()).done;) {
|
|
110
|
-
var feature = _step.value;
|
|
111
|
-
|
|
112
|
-
var _featureSpanPx = (0, _util.featureSpanPx)(feature, region, bpPerPx),
|
|
113
|
-
_featureSpanPx2 = (0, _slicedToArray2.default)(_featureSpanPx, 2),
|
|
114
|
-
leftPx = _featureSpanPx2[0],
|
|
115
|
-
rightPx = _featureSpanPx2[1];
|
|
116
|
-
|
|
117
|
-
var w = rightPx - leftPx + 0.3; // fudge factor for subpixel rendering
|
|
118
|
-
|
|
119
|
-
ctx.fillStyle = colorCallback(feature);
|
|
120
|
-
ctx.fillRect(leftPx, 0, w, height);
|
|
121
|
-
}
|
|
122
|
-
} catch (err) {
|
|
123
|
-
_iterator.e(err);
|
|
124
|
-
} finally {
|
|
125
|
-
_iterator.f();
|
|
126
|
-
}
|
|
127
|
-
}
|
|
128
|
-
}]);
|
|
129
|
-
return DensityRenderer;
|
|
130
|
-
}(_WiggleBaseRenderer2.default);
|
|
131
|
-
|
|
132
|
-
exports.default = DensityRenderer;
|
|
133
|
-
var configSchema = (0, _configuration.ConfigurationSchema)('DensityRenderer', {}, {
|
|
134
|
-
baseConfiguration: _configSchema.default,
|
|
135
|
-
explicitlyTyped: true
|
|
136
|
-
});
|
|
137
|
-
exports.configSchema = configSchema;
|
|
19
|
+
//# sourceMappingURL=index.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/DensityRenderer/index.ts"],"names":[],"mappings":";;;;;AAAA,gEAAyC;AAGzC,sEAA+C;AAC/C,uEAA+C;AAE/C,mBAAe,UAAC,aAA4B;IAC1C,aAAa,CAAC,eAAe,CAC3B;QACE,OAAA,IAAI,yBAAe,CAAC;YAClB,IAAI,EAAE,iBAAiB;YACvB,cAAc,2BAAA;YACd,YAAY,wBAAA;YACZ,aAAa,eAAA;SACd,CAAC;IALF,CAKE,CACL,CAAA;AACH,CAAC,EAAA"}
|
|
@@ -1,4 +1,6 @@
|
|
|
1
|
+
import WiggleBaseRenderer, { RenderArgsDeserializedWithFeatures } from '../WiggleBaseRenderer';
|
|
1
2
|
export default class LinePlotRenderer extends WiggleBaseRenderer {
|
|
2
|
-
draw(ctx:
|
|
3
|
+
draw(ctx: CanvasRenderingContext2D, props: RenderArgsDeserializedWithFeatures): Promise<{
|
|
4
|
+
reducedFeatures: import("@jbrowse/core/util").Feature[];
|
|
5
|
+
}>;
|
|
3
6
|
}
|
|
4
|
-
import WiggleBaseRenderer from "../WiggleBaseRenderer";
|