@jbrowse/plugin-linear-genome-view 3.6.5 → 4.0.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/esm/BaseLinearDisplay/SVGLegend.d.ts +6 -0
- package/esm/BaseLinearDisplay/SVGLegend.js +17 -0
- package/esm/BaseLinearDisplay/calculateSvgLegendWidth.d.ts +2 -0
- package/esm/BaseLinearDisplay/calculateSvgLegendWidth.js +11 -0
- package/esm/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +3 -3
- package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js +13 -24
- package/esm/BaseLinearDisplay/components/Block.js +2 -2
- package/esm/BaseLinearDisplay/components/BlockErrorMessage.js +2 -2
- package/esm/BaseLinearDisplay/components/BlockMsg.js +11 -2
- package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/CollapseIntronsDialog.d.ts +9 -0
- package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/CollapseIntronsDialog.js +42 -0
- package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/TranscriptTable.d.ts +11 -0
- package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/TranscriptTable.js +40 -0
- package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/util.d.ts +19 -0
- package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/util.js +45 -0
- package/esm/BaseLinearDisplay/components/FloatingLabels.d.ts +5 -0
- package/esm/BaseLinearDisplay/components/FloatingLabels.js +89 -0
- package/esm/BaseLinearDisplay/components/FloatingLegend.d.ts +8 -0
- package/esm/BaseLinearDisplay/components/FloatingLegend.js +43 -0
- package/esm/BaseLinearDisplay/components/LinearBlocks.d.ts +1 -5
- package/esm/BaseLinearDisplay/components/LinearBlocks.js +5 -42
- package/esm/BaseLinearDisplay/components/LoadingOverlay.d.ts +4 -0
- package/esm/BaseLinearDisplay/components/LoadingOverlay.js +49 -0
- package/esm/BaseLinearDisplay/components/MaxHeightReachedIndicator.d.ts +4 -0
- package/esm/BaseLinearDisplay/components/MaxHeightReachedIndicator.js +26 -0
- package/esm/BaseLinearDisplay/components/MenuPage.d.ts +8 -0
- package/esm/BaseLinearDisplay/components/MenuPage.js +24 -0
- package/esm/BaseLinearDisplay/components/NonBlockCanvasDisplayComponent.d.ts +19 -0
- package/esm/BaseLinearDisplay/components/NonBlockCanvasDisplayComponent.js +48 -0
- package/esm/BaseLinearDisplay/components/RenderedBlocks.d.ts +12 -0
- package/esm/BaseLinearDisplay/components/RenderedBlocks.js +22 -0
- package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.d.ts +4 -4
- package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +5 -8
- package/esm/BaseLinearDisplay/components/TooLargeMessage.js +3 -3
- package/esm/BaseLinearDisplay/components/Tooltip.d.ts +2 -0
- package/esm/BaseLinearDisplay/components/Tooltip.js +10 -7
- package/esm/BaseLinearDisplay/components/types.d.ts +1 -0
- package/esm/BaseLinearDisplay/components/types.js +1 -0
- package/esm/BaseLinearDisplay/components/util.d.ts +21 -0
- package/esm/BaseLinearDisplay/components/util.js +116 -0
- package/esm/BaseLinearDisplay/index.d.ts +17 -8
- package/esm/BaseLinearDisplay/index.js +13 -6
- package/esm/BaseLinearDisplay/model.d.ts +1177 -0
- package/esm/BaseLinearDisplay/model.js +424 -0
- package/esm/BaseLinearDisplay/models/FeatureDensityMixin.d.ts +5 -5
- package/esm/BaseLinearDisplay/models/FeatureDensityMixin.js +11 -14
- package/esm/BaseLinearDisplay/models/NonBlockCanvasDisplayMixin.d.ts +21 -0
- package/esm/BaseLinearDisplay/models/NonBlockCanvasDisplayMixin.js +46 -0
- package/esm/BaseLinearDisplay/models/TrackHeightMixin.d.ts +3 -3
- package/esm/BaseLinearDisplay/models/TrackHeightMixin.js +2 -3
- package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.d.ts +1 -1
- package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.js +2 -3
- package/esm/BaseLinearDisplay/models/calculateLabelPositions.d.ts +24 -0
- package/esm/BaseLinearDisplay/models/calculateLabelPositions.js +60 -0
- package/esm/BaseLinearDisplay/models/configSchema.d.ts +2 -2
- package/esm/BaseLinearDisplay/models/configSchema.js +3 -3
- package/esm/BaseLinearDisplay/models/renderSvg.d.ts +3 -7
- package/esm/BaseLinearDisplay/models/renderSvg.js +22 -11
- package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +37 -19
- package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js +151 -135
- package/esm/BaseLinearDisplay/models/util.d.ts +4 -4
- package/esm/BaseLinearDisplay/models/util.js +16 -13
- package/esm/BaseLinearDisplay/renderSvg.d.ts +3 -0
- package/esm/BaseLinearDisplay/renderSvg.js +59 -0
- package/esm/BaseLinearDisplay/types.d.ts +47 -0
- package/esm/BaseLinearDisplay/types.js +3 -0
- package/esm/BaseLinearDisplay/util.d.ts +15 -0
- package/esm/BaseLinearDisplay/util.js +61 -0
- package/esm/BasicTrack/configSchema.d.ts +16 -11
- package/esm/BasicTrack/index.js +1 -1
- package/esm/FeatureTrack/configSchema.d.ts +16 -11
- package/esm/FeatureTrack/index.js +1 -1
- package/esm/LaunchLinearGenomeView/index.js +12 -62
- package/esm/LinearBareDisplay/configSchema.d.ts +4 -4
- package/esm/LinearBareDisplay/configSchema.js +1 -1
- package/esm/LinearBareDisplay/index.d.ts +2 -2
- package/esm/LinearBareDisplay/index.js +5 -5
- package/esm/LinearBareDisplay/model.d.ts +959 -92
- package/esm/LinearBareDisplay/model.js +3 -6
- package/esm/LinearBasicDisplay/components/LinearBasicDisplayComponent.d.ts +5 -0
- package/esm/LinearBasicDisplay/components/LinearBasicDisplayComponent.js +9 -0
- package/esm/LinearBasicDisplay/configSchema.d.ts +4 -4
- package/esm/LinearBasicDisplay/configSchema.js +1 -1
- package/esm/LinearBasicDisplay/index.d.ts +2 -2
- package/esm/LinearBasicDisplay/index.js +6 -6
- package/esm/LinearBasicDisplay/model.d.ts +1134 -122
- package/esm/LinearBasicDisplay/model.js +116 -116
- package/esm/{LinearBasicDisplay → LinearFeatureDisplay}/components/AddFiltersDialog.js +2 -2
- package/esm/{LinearBasicDisplay → LinearFeatureDisplay}/components/SetMaxHeightDialog.js +3 -3
- package/{dist/LinearBasicDisplay → esm/LinearFeatureDisplay}/configSchema.d.ts +4 -4
- package/esm/LinearFeatureDisplay/configSchema.js +11 -0
- package/esm/LinearFeatureDisplay/index.d.ts +3 -0
- package/esm/LinearFeatureDisplay/index.js +2 -0
- package/esm/LinearFeatureDisplay/model.d.ts +1415 -0
- package/esm/LinearFeatureDisplay/model.js +265 -0
- package/esm/LinearGenomeView/SVGErrorBox.d.ts +5 -0
- package/esm/LinearGenomeView/SVGErrorBox.js +4 -0
- package/esm/LinearGenomeView/afterAttach.d.ts +5 -0
- package/esm/LinearGenomeView/afterAttach.js +95 -0
- package/esm/LinearGenomeView/components/CenterLine.js +6 -4
- package/esm/LinearGenomeView/components/Cytobands.js +4 -4
- package/esm/LinearGenomeView/components/ExportSvgDialog.d.ts +1 -1
- package/esm/LinearGenomeView/components/ExportSvgDialog.js +5 -1
- package/esm/LinearGenomeView/components/GetSequenceDialog.d.ts +8 -2
- package/esm/LinearGenomeView/components/GetSequenceDialog.js +13 -16
- package/esm/LinearGenomeView/components/Gridlines.js +18 -15
- package/esm/LinearGenomeView/components/Header.js +9 -9
- package/esm/LinearGenomeView/components/HeaderPanControls.js +2 -2
- package/esm/LinearGenomeView/components/HeaderRegionWidth.js +4 -5
- package/esm/LinearGenomeView/components/HeaderTrackSelectorButton.js +2 -2
- package/esm/LinearGenomeView/components/HeaderZoomControls.js +3 -3
- package/esm/LinearGenomeView/components/Highlight.d.ts +1 -1
- package/esm/LinearGenomeView/components/Highlight.js +6 -6
- package/esm/LinearGenomeView/components/ImportForm.d.ts +1 -1
- package/esm/LinearGenomeView/components/ImportForm.js +14 -12
- package/esm/LinearGenomeView/components/ImportFormRefNameAutocomplete.js +3 -3
- package/esm/LinearGenomeView/components/LinearGenomeView.js +7 -7
- package/esm/LinearGenomeView/components/LinearGenomeViewContainer.js +7 -8
- package/esm/LinearGenomeView/components/MiniControls.js +6 -6
- package/esm/LinearGenomeView/components/NoTracksActiveButton.js +2 -2
- package/esm/LinearGenomeView/components/OverviewHighlight.d.ts +1 -1
- package/esm/LinearGenomeView/components/OverviewHighlight.js +5 -5
- package/esm/LinearGenomeView/components/OverviewRubberband.js +4 -4
- package/esm/LinearGenomeView/components/OverviewRubberbandHoverTooltip.js +9 -5
- package/esm/LinearGenomeView/components/OverviewScalebar.js +36 -28
- package/esm/LinearGenomeView/components/OverviewScalebarPolygon.js +5 -5
- package/esm/LinearGenomeView/components/OverviewScalebarTickLabels.js +7 -7
- package/esm/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js +1 -1
- package/esm/LinearGenomeView/components/RefNameAutocomplete/index.d.ts +1 -1
- package/esm/LinearGenomeView/components/RefNameAutocomplete/index.js +10 -10
- package/esm/LinearGenomeView/components/RegionWidthEditorDialog.d.ts +1 -1
- package/esm/LinearGenomeView/components/RegionWidthEditorDialog.js +6 -4
- package/esm/LinearGenomeView/components/Rubberband.js +9 -7
- package/esm/LinearGenomeView/components/RubberbandSpan.js +4 -5
- package/esm/LinearGenomeView/components/Scalebar.js +8 -10
- package/esm/LinearGenomeView/components/ScalebarCoordinateLabels.d.ts +1 -1
- package/esm/LinearGenomeView/components/ScalebarCoordinateLabels.js +50 -17
- package/esm/LinearGenomeView/components/ScalebarRefNameLabels.d.ts +1 -1
- package/esm/LinearGenomeView/components/ScalebarRefNameLabels.js +13 -11
- package/esm/LinearGenomeView/components/SearchBox.d.ts +1 -1
- package/esm/LinearGenomeView/components/SearchBox.js +8 -9
- package/esm/LinearGenomeView/components/SearchResultsDialog.d.ts +1 -1
- package/esm/LinearGenomeView/components/SearchResultsDialog.js +2 -2
- package/esm/LinearGenomeView/components/SearchResultsTable.d.ts +1 -1
- package/esm/LinearGenomeView/components/SearchResultsTable.js +4 -6
- package/esm/LinearGenomeView/components/SequenceSearchDialog.js +6 -6
- package/esm/LinearGenomeView/components/TrackContainer.js +32 -20
- package/esm/LinearGenomeView/components/TrackLabel.js +10 -11
- package/esm/LinearGenomeView/components/TrackLabelContainer.js +7 -8
- package/esm/LinearGenomeView/components/TrackLabelDragHandle.js +1 -1
- package/esm/LinearGenomeView/components/TrackLabelMenu.js +80 -68
- package/esm/LinearGenomeView/components/TrackRenderingContainer.d.ts +1 -2
- package/esm/LinearGenomeView/components/TrackRenderingContainer.js +5 -5
- package/esm/LinearGenomeView/components/TracksContainer.js +18 -15
- package/esm/LinearGenomeView/components/VerticalGuide.js +5 -3
- package/esm/LinearGenomeView/components/fetchSequence.d.ts +7 -2
- package/esm/LinearGenomeView/components/useRangeSelect.d.ts +27 -2
- package/esm/LinearGenomeView/components/useRangeSelect.js +26 -20
- package/esm/LinearGenomeView/components/useWheelScroll.js +22 -12
- package/esm/LinearGenomeView/components/util.d.ts +2 -13
- package/esm/LinearGenomeView/components/util.js +12 -31
- package/esm/LinearGenomeView/index.d.ts +1 -1
- package/esm/LinearGenomeView/index.js +3 -3
- package/esm/LinearGenomeView/keyboardHandler.d.ts +2 -0
- package/esm/LinearGenomeView/keyboardHandler.js +29 -0
- package/esm/LinearGenomeView/menuItems.d.ts +7 -0
- package/esm/LinearGenomeView/menuItems.js +299 -0
- package/esm/LinearGenomeView/model.d.ts +92 -89
- package/esm/LinearGenomeView/model.js +166 -414
- package/esm/LinearGenomeView/svgExportUtil.d.ts +9 -0
- package/esm/LinearGenomeView/svgExportUtil.js +6 -0
- package/{dist/LinearGenomeView/svgcomponents/SVGRegionSeparators.d.ts → esm/LinearGenomeView/svgcomponents/SVGGridlines.d.ts} +2 -2
- package/esm/LinearGenomeView/svgcomponents/SVGGridlines.js +20 -0
- package/esm/LinearGenomeView/svgcomponents/SVGHeader.js +5 -5
- package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.d.ts +4 -3
- package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js +24 -12
- package/esm/LinearGenomeView/svgcomponents/SVGRuler.js +13 -5
- package/esm/LinearGenomeView/svgcomponents/SVGTracks.js +2 -2
- package/esm/LinearGenomeView/types.d.ts +5 -1
- package/esm/LinearGenomeView/util.d.ts +2 -2
- package/esm/LinearGenomeView/util.js +8 -6
- package/esm/index.d.ts +975 -94
- package/esm/index.js +37 -38
- package/esm/searchUtils.d.ts +1 -1
- package/esm/searchUtils.js +6 -4
- package/package.json +28 -33
- package/dist/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +0 -8
- package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js +0 -72
- package/dist/BaseLinearDisplay/components/Block.d.ts +0 -14
- package/dist/BaseLinearDisplay/components/Block.js +0 -50
- package/dist/BaseLinearDisplay/components/BlockErrorMessage.d.ts +0 -7
- package/dist/BaseLinearDisplay/components/BlockErrorMessage.js +0 -27
- package/dist/BaseLinearDisplay/components/BlockLoadingMessage.d.ts +0 -6
- package/dist/BaseLinearDisplay/components/BlockLoadingMessage.js +0 -26
- package/dist/BaseLinearDisplay/components/BlockMsg.d.ts +0 -6
- package/dist/BaseLinearDisplay/components/BlockMsg.js +0 -20
- package/dist/BaseLinearDisplay/components/LinearBlocks.d.ts +0 -9
- package/dist/BaseLinearDisplay/components/LinearBlocks.js +0 -61
- package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.d.ts +0 -11
- package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +0 -59
- package/dist/BaseLinearDisplay/components/TooLargeMessage.d.ts +0 -10
- package/dist/BaseLinearDisplay/components/TooLargeMessage.js +0 -25
- package/dist/BaseLinearDisplay/components/Tooltip.d.ts +0 -11
- package/dist/BaseLinearDisplay/components/Tooltip.js +0 -24
- package/dist/BaseLinearDisplay/index.d.ts +0 -8
- package/dist/BaseLinearDisplay/index.js +0 -20
- package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +0 -311
- package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js +0 -325
- package/dist/BaseLinearDisplay/models/FeatureDensityMixin.d.ts +0 -32
- package/dist/BaseLinearDisplay/models/FeatureDensityMixin.js +0 -122
- package/dist/BaseLinearDisplay/models/TrackHeightMixin.d.ts +0 -11
- package/dist/BaseLinearDisplay/models/TrackHeightMixin.js +0 -35
- package/dist/BaseLinearDisplay/models/autorunFeatureDensityStats.d.ts +0 -2
- package/dist/BaseLinearDisplay/models/autorunFeatureDensityStats.js +0 -33
- package/dist/BaseLinearDisplay/models/configSchema.d.ts +0 -29
- package/dist/BaseLinearDisplay/models/configSchema.js +0 -35
- package/dist/BaseLinearDisplay/models/renderSvg.d.ts +0 -7
- package/dist/BaseLinearDisplay/models/renderSvg.js +0 -80
- package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +0 -78
- package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js +0 -229
- package/dist/BaseLinearDisplay/models/util.d.ts +0 -22
- package/dist/BaseLinearDisplay/models/util.js +0 -45
- package/dist/BasicTrack/configSchema.d.ts +0 -80
- package/dist/BasicTrack/configSchema.js +0 -10
- package/dist/BasicTrack/index.d.ts +0 -2
- package/dist/BasicTrack/index.js +0 -18
- package/dist/FeatureTrack/configSchema.d.ts +0 -80
- package/dist/FeatureTrack/configSchema.js +0 -10
- package/dist/FeatureTrack/index.d.ts +0 -2
- package/dist/FeatureTrack/index.js +0 -19
- package/dist/LaunchLinearGenomeView/index.d.ts +0 -2
- package/dist/LaunchLinearGenomeView/index.js +0 -70
- package/dist/LinearBareDisplay/configSchema.d.ts +0 -32
- package/dist/LinearBareDisplay/configSchema.js +0 -13
- package/dist/LinearBareDisplay/index.d.ts +0 -4
- package/dist/LinearBareDisplay/index.js +0 -26
- package/dist/LinearBareDisplay/model.d.ts +0 -309
- package/dist/LinearBareDisplay/model.js +0 -38
- package/dist/LinearBasicDisplay/components/AddFiltersDialog.js +0 -61
- package/dist/LinearBasicDisplay/components/SetMaxHeightDialog.js +0 -28
- package/dist/LinearBasicDisplay/configSchema.js +0 -13
- package/dist/LinearBasicDisplay/index.d.ts +0 -4
- package/dist/LinearBasicDisplay/index.js +0 -29
- package/dist/LinearBasicDisplay/model.d.ts +0 -346
- package/dist/LinearBasicDisplay/model.js +0 -192
- package/dist/LinearGenomeView/components/CenterLine.d.ts +0 -6
- package/dist/LinearGenomeView/components/CenterLine.js +0 -38
- package/dist/LinearGenomeView/components/Cytobands.d.ts +0 -9
- package/dist/LinearGenomeView/components/Cytobands.js +0 -89
- package/dist/LinearGenomeView/components/ExportSvgDialog.d.ts +0 -7
- package/dist/LinearGenomeView/components/ExportSvgDialog.js +0 -57
- package/dist/LinearGenomeView/components/GetSequenceDialog.d.ts +0 -6
- package/dist/LinearGenomeView/components/GetSequenceDialog.js +0 -109
- package/dist/LinearGenomeView/components/Gridlines.d.ts +0 -7
- package/dist/LinearGenomeView/components/Gridlines.js +0 -70
- package/dist/LinearGenomeView/components/Header.d.ts +0 -5
- package/dist/LinearGenomeView/components/Header.js +0 -38
- package/dist/LinearGenomeView/components/HeaderPanControls.d.ts +0 -6
- package/dist/LinearGenomeView/components/HeaderPanControls.js +0 -27
- package/dist/LinearGenomeView/components/HeaderRegionWidth.d.ts +0 -5
- package/dist/LinearGenomeView/components/HeaderRegionWidth.js +0 -21
- package/dist/LinearGenomeView/components/HeaderTrackSelectorButton.d.ts +0 -5
- package/dist/LinearGenomeView/components/HeaderTrackSelectorButton.js +0 -19
- package/dist/LinearGenomeView/components/HeaderZoomControls.d.ts +0 -5
- package/dist/LinearGenomeView/components/HeaderZoomControls.js +0 -109
- package/dist/LinearGenomeView/components/Highlight.d.ts +0 -12
- package/dist/LinearGenomeView/components/Highlight.js +0 -95
- package/dist/LinearGenomeView/components/ImportForm.d.ts +0 -6
- package/dist/LinearGenomeView/components/ImportForm.js +0 -80
- package/dist/LinearGenomeView/components/ImportFormRefNameAutocomplete.d.ts +0 -11
- package/dist/LinearGenomeView/components/ImportFormRefNameAutocomplete.js +0 -32
- package/dist/LinearGenomeView/components/LinearGenomeView.d.ts +0 -5
- package/dist/LinearGenomeView/components/LinearGenomeView.js +0 -57
- package/dist/LinearGenomeView/components/LinearGenomeViewContainer.d.ts +0 -5
- package/dist/LinearGenomeView/components/LinearGenomeViewContainer.js +0 -98
- package/dist/LinearGenomeView/components/MiniControls.d.ts +0 -5
- package/dist/LinearGenomeView/components/MiniControls.js +0 -36
- package/dist/LinearGenomeView/components/NoTracksActiveButton.d.ts +0 -5
- package/dist/LinearGenomeView/components/NoTracksActiveButton.js +0 -23
- package/dist/LinearGenomeView/components/OverviewHighlight.d.ts +0 -8
- package/dist/LinearGenomeView/components/OverviewHighlight.js +0 -50
- package/dist/LinearGenomeView/components/OverviewRubberband.d.ts +0 -9
- package/dist/LinearGenomeView/components/OverviewRubberband.js +0 -113
- package/dist/LinearGenomeView/components/OverviewRubberbandHoverTooltip.d.ts +0 -10
- package/dist/LinearGenomeView/components/OverviewRubberbandHoverTooltip.js +0 -28
- package/dist/LinearGenomeView/components/OverviewScalebar.d.ts +0 -7
- package/dist/LinearGenomeView/components/OverviewScalebar.js +0 -146
- package/dist/LinearGenomeView/components/OverviewScalebarPolygon.d.ts +0 -8
- package/dist/LinearGenomeView/components/OverviewScalebarPolygon.js +0 -41
- package/dist/LinearGenomeView/components/OverviewScalebarTickLabels.d.ts +0 -10
- package/dist/LinearGenomeView/components/OverviewScalebarTickLabels.js +0 -37
- package/dist/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.d.ts +0 -8
- package/dist/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.js +0 -18
- package/dist/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.d.ts +0 -3
- package/dist/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js +0 -56
- package/dist/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.d.ts +0 -3
- package/dist/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.js +0 -11
- package/dist/LinearGenomeView/components/RefNameAutocomplete/index.d.ts +0 -16
- package/dist/LinearGenomeView/components/RefNameAutocomplete/index.js +0 -127
- package/dist/LinearGenomeView/components/RefNameAutocomplete/util.d.ts +0 -10
- package/dist/LinearGenomeView/components/RefNameAutocomplete/util.js +0 -53
- package/dist/LinearGenomeView/components/RegionWidthEditorDialog.d.ts +0 -6
- package/dist/LinearGenomeView/components/RegionWidthEditorDialog.js +0 -30
- package/dist/LinearGenomeView/components/Rubberband.d.ts +0 -7
- package/dist/LinearGenomeView/components/Rubberband.js +0 -35
- package/dist/LinearGenomeView/components/RubberbandSpan.d.ts +0 -15
- package/dist/LinearGenomeView/components/RubberbandSpan.js +0 -39
- package/dist/LinearGenomeView/components/RubberbandTooltip.d.ts +0 -5
- package/dist/LinearGenomeView/components/RubberbandTooltip.js +0 -20
- package/dist/LinearGenomeView/components/Scalebar.d.ts +0 -10
- package/dist/LinearGenomeView/components/Scalebar.js +0 -40
- package/dist/LinearGenomeView/components/ScalebarCoordinateLabels.d.ts +0 -6
- package/dist/LinearGenomeView/components/ScalebarCoordinateLabels.js +0 -29
- package/dist/LinearGenomeView/components/ScalebarCoordinateTicks.d.ts +0 -6
- package/dist/LinearGenomeView/components/ScalebarCoordinateTicks.js +0 -38
- package/dist/LinearGenomeView/components/ScalebarRefNameLabels.d.ts +0 -6
- package/dist/LinearGenomeView/components/ScalebarRefNameLabels.js +0 -46
- package/dist/LinearGenomeView/components/SearchBox.d.ts +0 -6
- package/dist/LinearGenomeView/components/SearchBox.js +0 -88
- package/dist/LinearGenomeView/components/SearchResultsDialog.d.ts +0 -9
- package/dist/LinearGenomeView/components/SearchResultsDialog.js +0 -15
- package/dist/LinearGenomeView/components/SearchResultsTable.d.ts +0 -8
- package/dist/LinearGenomeView/components/SearchResultsTable.js +0 -74
- package/dist/LinearGenomeView/components/SequenceSearchDialog.d.ts +0 -8
- package/dist/LinearGenomeView/components/SequenceSearchDialog.js +0 -67
- package/dist/LinearGenomeView/components/TrackContainer.d.ts +0 -8
- package/dist/LinearGenomeView/components/TrackContainer.js +0 -51
- package/dist/LinearGenomeView/components/TrackLabel.d.ts +0 -7
- package/dist/LinearGenomeView/components/TrackLabel.js +0 -49
- package/dist/LinearGenomeView/components/TrackLabelContainer.d.ts +0 -8
- package/dist/LinearGenomeView/components/TrackLabelContainer.js +0 -31
- package/dist/LinearGenomeView/components/TrackLabelDragHandle.d.ts +0 -8
- package/dist/LinearGenomeView/components/TrackLabelDragHandle.js +0 -32
- package/dist/LinearGenomeView/components/TrackLabelMenu.d.ts +0 -5
- package/dist/LinearGenomeView/components/TrackLabelMenu.js +0 -93
- package/dist/LinearGenomeView/components/TrackRenderingContainer.d.ts +0 -9
- package/dist/LinearGenomeView/components/TrackRenderingContainer.js +0 -50
- package/dist/LinearGenomeView/components/TracksContainer.d.ts +0 -7
- package/dist/LinearGenomeView/components/TracksContainer.js +0 -84
- package/dist/LinearGenomeView/components/VerticalGuide.d.ts +0 -7
- package/dist/LinearGenomeView/components/VerticalGuide.js +0 -31
- package/dist/LinearGenomeView/components/fetchSequence.d.ts +0 -4
- package/dist/LinearGenomeView/components/fetchSequence.js +0 -29
- package/dist/LinearGenomeView/components/useRangeSelect.d.ts +0 -59
- package/dist/LinearGenomeView/components/useRangeSelect.js +0 -131
- package/dist/LinearGenomeView/components/useSideScroll.d.ts +0 -6
- package/dist/LinearGenomeView/components/useSideScroll.js +0 -60
- package/dist/LinearGenomeView/components/useWheelScroll.d.ts +0 -7
- package/dist/LinearGenomeView/components/useWheelScroll.js +0 -62
- package/dist/LinearGenomeView/components/util.d.ts +0 -25
- package/dist/LinearGenomeView/components/util.js +0 -49
- package/dist/LinearGenomeView/consts.d.ts +0 -7
- package/dist/LinearGenomeView/consts.js +0 -10
- package/dist/LinearGenomeView/index.d.ts +0 -3
- package/dist/LinearGenomeView/index.js +0 -53
- package/dist/LinearGenomeView/model.d.ts +0 -268
- package/dist/LinearGenomeView/model.js +0 -1109
- package/dist/LinearGenomeView/svgcomponents/SVGBackground.d.ts +0 -5
- package/dist/LinearGenomeView/svgcomponents/SVGBackground.js +0 -10
- package/dist/LinearGenomeView/svgcomponents/SVGHeader.d.ts +0 -7
- package/dist/LinearGenomeView/svgcomponents/SVGHeader.js +0 -47
- package/dist/LinearGenomeView/svgcomponents/SVGLinearGenomeView.d.ts +0 -6
- package/dist/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js +0 -42
- package/dist/LinearGenomeView/svgcomponents/SVGRegionSeparators.js +0 -8
- package/dist/LinearGenomeView/svgcomponents/SVGRuler.d.ts +0 -7
- package/dist/LinearGenomeView/svgcomponents/SVGRuler.js +0 -39
- package/dist/LinearGenomeView/svgcomponents/SVGScalebar.d.ts +0 -7
- package/dist/LinearGenomeView/svgcomponents/SVGScalebar.js +0 -17
- package/dist/LinearGenomeView/svgcomponents/SVGTrackLabel.d.ts +0 -7
- package/dist/LinearGenomeView/svgcomponents/SVGTrackLabel.js +0 -14
- package/dist/LinearGenomeView/svgcomponents/SVGTracks.d.ts +0 -21
- package/dist/LinearGenomeView/svgcomponents/SVGTracks.js +0 -32
- package/dist/LinearGenomeView/svgcomponents/util.d.ts +0 -8
- package/dist/LinearGenomeView/svgcomponents/util.js +0 -8
- package/dist/LinearGenomeView/types.d.ts +0 -43
- package/dist/LinearGenomeView/types.js +0 -2
- package/dist/LinearGenomeView/util.d.ts +0 -26
- package/dist/LinearGenomeView/util.js +0 -138
- package/dist/index.d.ts +0 -353
- package/dist/index.js +0 -120
- package/dist/searchUtils.d.ts +0 -26
- package/dist/searchUtils.js +0 -80
- package/esm/BaseLinearDisplay/components/BlockLoadingMessage.d.ts +0 -6
- package/esm/BaseLinearDisplay/components/BlockLoadingMessage.js +0 -24
- package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +0 -311
- package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.js +0 -286
- package/esm/LinearBasicDisplay/components/AddFiltersDialog.d.ts +0 -9
- package/esm/LinearBasicDisplay/components/SetMaxHeightDialog.d.ts +0 -8
- package/esm/LinearGenomeView/components/ScalebarCoordinateTicks.d.ts +0 -6
- package/esm/LinearGenomeView/components/ScalebarCoordinateTicks.js +0 -36
- /package/{dist/LinearBasicDisplay → esm/LinearFeatureDisplay}/components/AddFiltersDialog.d.ts +0 -0
- /package/{dist/LinearBasicDisplay → esm/LinearFeatureDisplay}/components/SetMaxHeightDialog.d.ts +0 -0
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import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
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export declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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type: import("mobx-state-tree").ISimpleType<string>;
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rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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export declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): import("@jbrowse/mobx-state-tree").IModelType<{
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id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
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type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
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rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
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} & {
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heightPreConfig: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
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userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
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userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
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blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
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key: import("mobx-state-tree").ISimpleType<string>;
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region: import("mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
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reloadFlag: import("mobx-state-tree").IType<number | undefined, number, number>;
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isLeftEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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isRightEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
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key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
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region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
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reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
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isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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}, {
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stopToken:
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filled: boolean;
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maxHeightReached: boolean;
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message
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};
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}) => import("react/jsx-runtime").JSX.Element
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}) => import("react/jsx-runtime").JSX.Element;
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cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
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setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
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setMessage(messageText: string): void;
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setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock").RenderedProps | undefined): void;
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setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
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setError(error: unknown): void;
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reload(): void;
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setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
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} & {
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afterAttach(): void;
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}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
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configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
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maxFeatureScreenDensity: {
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}, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
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} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
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}>;
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
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}> | null;
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readonly effectiveRpcDriverName: any;
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renderingProps(): {
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} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
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} & {
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} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
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} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
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type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
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}, {
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statusMessage: string | undefined;
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}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
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blockState?: Record<string, any>;
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}>;
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readonly DisplayBlurb: React.FC<{
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model: {
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} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
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} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
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id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
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type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
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rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
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}, {
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legendItems(_theme?: import("@mui/material").Theme): import("../index.ts").LegendItem[];
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readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("../BaseLinearDisplay/types.ts").LayoutRecord>;
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getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
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@@ -195,56 +327,780 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
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navToFeature(feature: import("@jbrowse/core/util").Feature): void;
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setSubfeatureIdUnderMouse(subfeatureId?: string): void;
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|
setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature): void;
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reload(): Promise<void>;
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} & {
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selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
|
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|
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setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
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trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
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|
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renderingProps(): {
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displayModel: {
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userBpPerPxLimit: number | undefined;
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userByteSizeLimit: number | undefined;
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blockState: import("@jbrowse/mobx-state-tree").IMSTMap<import("@jbrowse/mobx-state-tree").IModelType<{
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key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
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region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
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reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
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|
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isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
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|
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|
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|
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}, {
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|
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stopToken: import("@jbrowse/core/util").StopToken | undefined;
|
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|
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filled: boolean;
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|
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reactElement: React.ReactElement | undefined;
|
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|
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features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
|
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|
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layout: any;
|
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|
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|
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|
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|
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|
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message: string | undefined;
|
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|
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|
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|
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ReactComponent: ({ model, }: {
|
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|
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|
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|
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|
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|
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|
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|
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message?: React.ReactNode;
|
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|
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|
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|
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reactElement?: React.ReactElement;
|
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|
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|
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|
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};
|
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|
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}) => import("react/jsx-runtime").JSX.Element;
|
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|
+
renderProps: any;
|
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|
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renderArgs: Record<string, unknown> | undefined;
|
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|
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isRenderingPending: boolean;
|
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|
+
cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
|
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|
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} & {
|
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|
+
doReload(): void;
|
|
383
|
+
setStatusMessage(message: string): void;
|
|
384
|
+
setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
|
|
385
|
+
setMessage(messageText: string): void;
|
|
386
|
+
setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
|
|
387
|
+
setError(error: unknown): void;
|
|
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|
+
reload(): void;
|
|
389
|
+
setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
|
|
390
|
+
beforeDestroy(): void;
|
|
391
|
+
} & {
|
|
392
|
+
readonly statusMessage: any;
|
|
393
|
+
} & {
|
|
394
|
+
afterAttach(): void;
|
|
395
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
396
|
+
key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
397
|
+
region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
|
|
398
|
+
reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
|
|
399
|
+
isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
400
|
+
isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
401
|
+
}, {
|
|
402
|
+
stopToken: import("@jbrowse/core/util").StopToken | undefined;
|
|
403
|
+
filled: boolean;
|
|
404
|
+
reactElement: React.ReactElement | undefined;
|
|
405
|
+
features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
|
|
406
|
+
layout: any;
|
|
407
|
+
blockStatusMessage: string;
|
|
408
|
+
error: unknown;
|
|
409
|
+
message: string | undefined;
|
|
410
|
+
maxHeightReached: boolean;
|
|
411
|
+
ReactComponent: ({ model, }: {
|
|
412
|
+
model: {
|
|
413
|
+
error?: unknown;
|
|
414
|
+
reload: () => void;
|
|
415
|
+
message?: React.ReactNode;
|
|
416
|
+
statusMessage?: string;
|
|
417
|
+
reactElement?: React.ReactElement;
|
|
418
|
+
isRenderingPending?: boolean;
|
|
419
|
+
};
|
|
420
|
+
}) => import("react/jsx-runtime").JSX.Element;
|
|
421
|
+
renderProps: any;
|
|
422
|
+
renderArgs: Record<string, unknown> | undefined;
|
|
423
|
+
isRenderingPending: boolean;
|
|
424
|
+
cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
|
|
425
|
+
} & {
|
|
426
|
+
doReload(): void;
|
|
427
|
+
setStatusMessage(message: string): void;
|
|
428
|
+
setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
|
|
429
|
+
setMessage(messageText: string): void;
|
|
430
|
+
setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
|
|
431
|
+
setError(error: unknown): void;
|
|
432
|
+
reload(): void;
|
|
433
|
+
setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
|
|
434
|
+
beforeDestroy(): void;
|
|
435
|
+
} & {
|
|
436
|
+
readonly statusMessage: any;
|
|
437
|
+
} & {
|
|
438
|
+
afterAttach(): void;
|
|
439
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
|
|
440
|
+
configuration: {
|
|
441
|
+
[x: string]: any;
|
|
442
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
443
|
+
setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
|
|
444
|
+
[x: string]: any;
|
|
445
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
446
|
+
setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
|
|
447
|
+
[x: string]: any;
|
|
448
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
|
|
449
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
|
|
450
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
|
|
451
|
+
maxFeatureScreenDensity: {
|
|
452
|
+
type: string;
|
|
453
|
+
description: string;
|
|
454
|
+
defaultValue: number;
|
|
455
|
+
};
|
|
456
|
+
fetchSizeLimit: {
|
|
457
|
+
type: string;
|
|
458
|
+
defaultValue: number;
|
|
459
|
+
description: string;
|
|
460
|
+
};
|
|
461
|
+
height: {
|
|
462
|
+
type: string;
|
|
463
|
+
defaultValue: number;
|
|
464
|
+
description: string;
|
|
465
|
+
};
|
|
466
|
+
mouseover: {
|
|
467
|
+
type: string;
|
|
468
|
+
description: string;
|
|
469
|
+
defaultValue: string;
|
|
470
|
+
contextVariable: string[];
|
|
471
|
+
};
|
|
472
|
+
jexlFilters: {
|
|
473
|
+
type: string;
|
|
474
|
+
description: string;
|
|
475
|
+
defaultValue: never[];
|
|
476
|
+
};
|
|
477
|
+
}, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>>;
|
|
478
|
+
showLegend: boolean | undefined;
|
|
479
|
+
showTooltips: boolean | undefined;
|
|
480
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
481
|
+
rendererTypeName: string;
|
|
482
|
+
error: unknown;
|
|
483
|
+
statusMessage: string | undefined;
|
|
484
|
+
} & {
|
|
485
|
+
readonly RenderingComponent: React.FC<{
|
|
486
|
+
model: {
|
|
487
|
+
id: string;
|
|
488
|
+
type: string;
|
|
489
|
+
rpcDriverName: string | undefined;
|
|
490
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
491
|
+
rendererTypeName: string;
|
|
492
|
+
error: unknown;
|
|
493
|
+
statusMessage: string | undefined;
|
|
494
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
495
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
496
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
497
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
498
|
+
}, {
|
|
499
|
+
rendererTypeName: string;
|
|
500
|
+
error: unknown;
|
|
501
|
+
statusMessage: string | undefined;
|
|
502
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
503
|
+
onHorizontalScroll?: () => void;
|
|
504
|
+
blockState?: Record<string, any>;
|
|
505
|
+
}>;
|
|
506
|
+
readonly DisplayBlurb: React.FC<{
|
|
507
|
+
model: {
|
|
508
|
+
id: string;
|
|
509
|
+
type: string;
|
|
510
|
+
rpcDriverName: string | undefined;
|
|
511
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
512
|
+
rendererTypeName: string;
|
|
513
|
+
error: unknown;
|
|
514
|
+
statusMessage: string | undefined;
|
|
515
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
516
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
517
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
518
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
519
|
+
}, {
|
|
520
|
+
rendererTypeName: string;
|
|
521
|
+
error: unknown;
|
|
522
|
+
statusMessage: string | undefined;
|
|
523
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
524
|
+
}> | null;
|
|
525
|
+
readonly adapterConfig: any;
|
|
526
|
+
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
527
|
+
readonly parentDisplay: any;
|
|
528
|
+
readonly effectiveRpcDriverName: any;
|
|
529
|
+
} & {
|
|
530
|
+
renderProps(): any;
|
|
531
|
+
renderingProps(): {
|
|
532
|
+
displayModel: {
|
|
533
|
+
id: string;
|
|
534
|
+
type: string;
|
|
535
|
+
rpcDriverName: string | undefined;
|
|
536
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
537
|
+
rendererTypeName: string;
|
|
538
|
+
error: unknown;
|
|
539
|
+
statusMessage: string | undefined;
|
|
540
|
+
} & {
|
|
541
|
+
readonly RenderingComponent: React.FC<{
|
|
542
|
+
model: {
|
|
543
|
+
id: string;
|
|
544
|
+
type: string;
|
|
545
|
+
rpcDriverName: string | undefined;
|
|
546
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
547
|
+
rendererTypeName: string;
|
|
548
|
+
error: unknown;
|
|
549
|
+
statusMessage: string | undefined;
|
|
550
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
551
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
552
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
553
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
554
|
+
}, {
|
|
555
|
+
rendererTypeName: string;
|
|
556
|
+
error: unknown;
|
|
557
|
+
statusMessage: string | undefined;
|
|
558
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
559
|
+
onHorizontalScroll?: () => void;
|
|
560
|
+
blockState?: Record<string, any>;
|
|
561
|
+
}>;
|
|
562
|
+
readonly DisplayBlurb: React.FC<{
|
|
563
|
+
model: {
|
|
564
|
+
id: string;
|
|
565
|
+
type: string;
|
|
566
|
+
rpcDriverName: string | undefined;
|
|
567
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
568
|
+
rendererTypeName: string;
|
|
569
|
+
error: unknown;
|
|
570
|
+
statusMessage: string | undefined;
|
|
571
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
572
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
573
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
574
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
575
|
+
}, {
|
|
576
|
+
rendererTypeName: string;
|
|
577
|
+
error: unknown;
|
|
578
|
+
statusMessage: string | undefined;
|
|
579
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
580
|
+
}> | null;
|
|
581
|
+
readonly adapterConfig: any;
|
|
582
|
+
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
583
|
+
readonly parentDisplay: any;
|
|
584
|
+
readonly effectiveRpcDriverName: any;
|
|
585
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
586
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
587
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
588
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
589
|
+
}, {
|
|
590
|
+
rendererTypeName: string;
|
|
591
|
+
error: unknown;
|
|
592
|
+
statusMessage: string | undefined;
|
|
593
|
+
} & {
|
|
594
|
+
readonly RenderingComponent: React.FC<{
|
|
595
|
+
model: {
|
|
596
|
+
id: string;
|
|
597
|
+
type: string;
|
|
598
|
+
rpcDriverName: string | undefined;
|
|
599
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
600
|
+
rendererTypeName: string;
|
|
601
|
+
error: unknown;
|
|
602
|
+
statusMessage: string | undefined;
|
|
603
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
604
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
605
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
606
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
607
|
+
}, {
|
|
608
|
+
rendererTypeName: string;
|
|
609
|
+
error: unknown;
|
|
610
|
+
statusMessage: string | undefined;
|
|
611
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
612
|
+
onHorizontalScroll?: () => void;
|
|
613
|
+
blockState?: Record<string, any>;
|
|
614
|
+
}>;
|
|
615
|
+
readonly DisplayBlurb: React.FC<{
|
|
616
|
+
model: {
|
|
617
|
+
id: string;
|
|
618
|
+
type: string;
|
|
619
|
+
rpcDriverName: string | undefined;
|
|
620
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
621
|
+
rendererTypeName: string;
|
|
622
|
+
error: unknown;
|
|
623
|
+
statusMessage: string | undefined;
|
|
624
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
625
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
626
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
627
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
628
|
+
}, {
|
|
629
|
+
rendererTypeName: string;
|
|
630
|
+
error: unknown;
|
|
631
|
+
statusMessage: string | undefined;
|
|
632
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
633
|
+
}> | null;
|
|
634
|
+
readonly adapterConfig: any;
|
|
635
|
+
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
636
|
+
readonly parentDisplay: any;
|
|
637
|
+
readonly effectiveRpcDriverName: any;
|
|
638
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
639
|
+
};
|
|
640
|
+
readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
|
|
641
|
+
readonly DisplayMessageComponent: undefined | React.FC<any>;
|
|
642
|
+
trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
|
|
643
|
+
readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
|
|
644
|
+
regionCannotBeRendered(): null;
|
|
645
|
+
} & {
|
|
646
|
+
setStatusMessage(arg?: string): void;
|
|
647
|
+
setError(error?: unknown): void;
|
|
648
|
+
setRpcDriverName(rpcDriverName: string): void;
|
|
649
|
+
reload(): void;
|
|
650
|
+
} & {
|
|
651
|
+
scrollTop: number;
|
|
652
|
+
} & {
|
|
653
|
+
readonly height: number;
|
|
654
|
+
} & {
|
|
655
|
+
setScrollTop(scrollTop: number): void;
|
|
656
|
+
setHeight(displayHeight: number): number;
|
|
657
|
+
resizeHeight(distance: number): number;
|
|
658
|
+
} & {
|
|
659
|
+
featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
|
|
660
|
+
featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
|
|
661
|
+
currStatsBpPerPx: number;
|
|
662
|
+
} & {
|
|
663
|
+
readonly currentBytesRequested: number;
|
|
664
|
+
readonly currentFeatureScreenDensity: number;
|
|
665
|
+
readonly maxFeatureScreenDensity: any;
|
|
666
|
+
readonly featureDensityStatsReady: boolean;
|
|
667
|
+
readonly maxAllowableBytes: number;
|
|
668
|
+
} & {
|
|
669
|
+
afterAttach(): void;
|
|
670
|
+
} & {
|
|
671
|
+
setCurrStatsBpPerPx(n: number): void;
|
|
672
|
+
setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
|
|
673
|
+
getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
|
|
674
|
+
setFeatureDensityStatsP(arg: any): void;
|
|
675
|
+
setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
|
|
676
|
+
clearFeatureDensityStats(): void;
|
|
677
|
+
} & {
|
|
678
|
+
readonly regionTooLarge: boolean;
|
|
679
|
+
readonly regionTooLargeReason: string;
|
|
680
|
+
} & {
|
|
681
|
+
readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
|
|
682
|
+
regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
|
|
683
|
+
regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
|
|
684
|
+
} & {
|
|
685
|
+
mouseoverExtraInformation: string | undefined;
|
|
686
|
+
featureIdUnderMouse: undefined | string;
|
|
687
|
+
subfeatureIdUnderMouse: undefined | string;
|
|
688
|
+
contextMenuFeature: undefined | import("@jbrowse/core/util").Feature;
|
|
689
|
+
} & {
|
|
690
|
+
readonly DisplayMessageComponent: undefined | React.FC<any>;
|
|
691
|
+
readonly blockType: "staticBlocks" | "dynamicBlocks";
|
|
692
|
+
readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
|
|
693
|
+
} & {
|
|
694
|
+
readonly renderDelay: number;
|
|
695
|
+
readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
|
|
696
|
+
legendItems(_theme?: import("@mui/material").Theme): import("../index.ts").LegendItem[];
|
|
697
|
+
svgLegendWidth(theme?: import("@mui/material").Theme): number;
|
|
698
|
+
readonly selectedFeatureId: string | undefined;
|
|
699
|
+
readonly featureWidgetType: {
|
|
700
|
+
type: string;
|
|
701
|
+
id: string;
|
|
702
|
+
};
|
|
703
|
+
} & {
|
|
704
|
+
readonly showTooltipsEnabled: boolean;
|
|
705
|
+
readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
|
|
706
|
+
readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
|
|
707
|
+
getFeatureById(featureId: string, parentFeatureId?: string): import("@jbrowse/core/util").Feature | undefined;
|
|
708
|
+
readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("../BaseLinearDisplay/types.ts").LayoutRecord>;
|
|
709
|
+
getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
|
|
710
|
+
getFeatureByID(blockKey: string, id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
|
|
711
|
+
searchFeatureByID(id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
|
|
712
|
+
readonly floatingLabelData: Map<string, import("../BaseLinearDisplay/components/util.ts").FeatureLabelData>;
|
|
713
|
+
} & {
|
|
714
|
+
addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
|
|
715
|
+
deleteBlock(key: string): void;
|
|
716
|
+
selectFeature(feature: import("@jbrowse/core/util").Feature): void;
|
|
717
|
+
navToFeature(feature: import("@jbrowse/core/util").Feature): void;
|
|
718
|
+
clearFeatureSelection(): void;
|
|
719
|
+
setFeatureIdUnderMouse(feature?: string): void;
|
|
720
|
+
setSubfeatureIdUnderMouse(subfeatureId?: string): void;
|
|
721
|
+
setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature): void;
|
|
722
|
+
setMouseoverExtraInformation(extra?: string): void;
|
|
723
|
+
setShowLegend(s: boolean): void;
|
|
724
|
+
setShowTooltips(arg: boolean): void;
|
|
725
|
+
} & {
|
|
726
|
+
reload(): Promise<void>;
|
|
727
|
+
} & {
|
|
728
|
+
selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
|
|
729
|
+
setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
|
|
730
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
731
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
732
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
733
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
734
|
+
} & {
|
|
735
|
+
heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
|
|
736
|
+
} & {
|
|
737
|
+
userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
|
|
738
|
+
userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
|
|
739
|
+
} & {
|
|
740
|
+
blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
741
|
+
key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
742
|
+
region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
|
|
743
|
+
reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
|
|
744
|
+
isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
745
|
+
isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
746
|
+
}, {
|
|
747
|
+
stopToken: import("@jbrowse/core/util").StopToken | undefined;
|
|
748
|
+
filled: boolean;
|
|
749
|
+
reactElement: React.ReactElement | undefined;
|
|
750
|
+
features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
|
|
751
|
+
layout: any;
|
|
752
|
+
blockStatusMessage: string;
|
|
753
|
+
error: unknown;
|
|
754
|
+
message: string | undefined;
|
|
755
|
+
maxHeightReached: boolean;
|
|
756
|
+
ReactComponent: ({ model, }: {
|
|
757
|
+
model: {
|
|
758
|
+
error?: unknown;
|
|
759
|
+
reload: () => void;
|
|
760
|
+
message?: React.ReactNode;
|
|
761
|
+
statusMessage?: string;
|
|
762
|
+
reactElement?: React.ReactElement;
|
|
763
|
+
isRenderingPending?: boolean;
|
|
764
|
+
};
|
|
765
|
+
}) => import("react/jsx-runtime").JSX.Element;
|
|
766
|
+
renderProps: any;
|
|
767
|
+
renderArgs: Record<string, unknown> | undefined;
|
|
768
|
+
isRenderingPending: boolean;
|
|
769
|
+
cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
|
|
770
|
+
} & {
|
|
771
|
+
doReload(): void;
|
|
772
|
+
setStatusMessage(message: string): void;
|
|
773
|
+
setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
|
|
774
|
+
setMessage(messageText: string): void;
|
|
775
|
+
setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
|
|
776
|
+
setError(error: unknown): void;
|
|
777
|
+
reload(): void;
|
|
778
|
+
setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
|
|
779
|
+
beforeDestroy(): void;
|
|
780
|
+
} & {
|
|
781
|
+
readonly statusMessage: any;
|
|
782
|
+
} & {
|
|
783
|
+
afterAttach(): void;
|
|
784
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
785
|
+
configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
|
|
786
|
+
maxFeatureScreenDensity: {
|
|
787
|
+
type: string;
|
|
788
|
+
description: string;
|
|
789
|
+
defaultValue: number;
|
|
790
|
+
};
|
|
791
|
+
fetchSizeLimit: {
|
|
792
|
+
type: string;
|
|
793
|
+
defaultValue: number;
|
|
794
|
+
description: string;
|
|
795
|
+
};
|
|
796
|
+
height: {
|
|
797
|
+
type: string;
|
|
798
|
+
defaultValue: number;
|
|
799
|
+
description: string;
|
|
800
|
+
};
|
|
801
|
+
mouseover: {
|
|
802
|
+
type: string;
|
|
803
|
+
description: string;
|
|
804
|
+
defaultValue: string;
|
|
805
|
+
contextVariable: string[];
|
|
806
|
+
};
|
|
807
|
+
jexlFilters: {
|
|
808
|
+
type: string;
|
|
809
|
+
description: string;
|
|
810
|
+
defaultValue: never[];
|
|
811
|
+
};
|
|
812
|
+
}, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
|
|
813
|
+
showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
|
|
814
|
+
showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
|
|
815
|
+
}, {
|
|
816
|
+
rendererTypeName: string;
|
|
817
|
+
error: unknown;
|
|
818
|
+
statusMessage: string | undefined;
|
|
819
|
+
} & {
|
|
820
|
+
readonly RenderingComponent: React.FC<{
|
|
821
|
+
model: {
|
|
822
|
+
id: string;
|
|
823
|
+
type: string;
|
|
824
|
+
rpcDriverName: string | undefined;
|
|
825
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
826
|
+
rendererTypeName: string;
|
|
827
|
+
error: unknown;
|
|
828
|
+
statusMessage: string | undefined;
|
|
829
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
830
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
831
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
832
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
833
|
+
}, {
|
|
834
|
+
rendererTypeName: string;
|
|
835
|
+
error: unknown;
|
|
836
|
+
statusMessage: string | undefined;
|
|
837
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
838
|
+
onHorizontalScroll?: () => void;
|
|
839
|
+
blockState?: Record<string, any>;
|
|
840
|
+
}>;
|
|
841
|
+
readonly DisplayBlurb: React.FC<{
|
|
842
|
+
model: {
|
|
843
|
+
id: string;
|
|
844
|
+
type: string;
|
|
845
|
+
rpcDriverName: string | undefined;
|
|
846
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
847
|
+
rendererTypeName: string;
|
|
848
|
+
error: unknown;
|
|
849
|
+
statusMessage: string | undefined;
|
|
850
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
851
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
852
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
853
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
854
|
+
}, {
|
|
855
|
+
rendererTypeName: string;
|
|
856
|
+
error: unknown;
|
|
857
|
+
statusMessage: string | undefined;
|
|
858
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
859
|
+
}> | null;
|
|
860
|
+
readonly adapterConfig: any;
|
|
861
|
+
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
862
|
+
readonly parentDisplay: any;
|
|
863
|
+
readonly effectiveRpcDriverName: any;
|
|
864
|
+
} & {
|
|
865
|
+
renderProps(): any;
|
|
866
|
+
renderingProps(): {
|
|
867
|
+
displayModel: {
|
|
868
|
+
id: string;
|
|
869
|
+
type: string;
|
|
870
|
+
rpcDriverName: string | undefined;
|
|
871
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
872
|
+
rendererTypeName: string;
|
|
873
|
+
error: unknown;
|
|
874
|
+
statusMessage: string | undefined;
|
|
875
|
+
} & {
|
|
876
|
+
readonly RenderingComponent: React.FC<{
|
|
877
|
+
model: {
|
|
878
|
+
id: string;
|
|
879
|
+
type: string;
|
|
880
|
+
rpcDriverName: string | undefined;
|
|
881
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
882
|
+
rendererTypeName: string;
|
|
883
|
+
error: unknown;
|
|
884
|
+
statusMessage: string | undefined;
|
|
885
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
886
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
887
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
888
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
889
|
+
}, {
|
|
890
|
+
rendererTypeName: string;
|
|
891
|
+
error: unknown;
|
|
892
|
+
statusMessage: string | undefined;
|
|
893
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
894
|
+
onHorizontalScroll?: () => void;
|
|
895
|
+
blockState?: Record<string, any>;
|
|
896
|
+
}>;
|
|
897
|
+
readonly DisplayBlurb: React.FC<{
|
|
898
|
+
model: {
|
|
899
|
+
id: string;
|
|
900
|
+
type: string;
|
|
901
|
+
rpcDriverName: string | undefined;
|
|
902
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
903
|
+
rendererTypeName: string;
|
|
904
|
+
error: unknown;
|
|
905
|
+
statusMessage: string | undefined;
|
|
906
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
907
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
908
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
909
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
910
|
+
}, {
|
|
911
|
+
rendererTypeName: string;
|
|
912
|
+
error: unknown;
|
|
913
|
+
statusMessage: string | undefined;
|
|
914
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
915
|
+
}> | null;
|
|
916
|
+
readonly adapterConfig: any;
|
|
917
|
+
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
918
|
+
readonly parentDisplay: any;
|
|
919
|
+
readonly effectiveRpcDriverName: any;
|
|
920
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
921
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
922
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
923
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
924
|
+
}, {
|
|
925
|
+
rendererTypeName: string;
|
|
926
|
+
error: unknown;
|
|
927
|
+
statusMessage: string | undefined;
|
|
928
|
+
} & {
|
|
929
|
+
readonly RenderingComponent: React.FC<{
|
|
930
|
+
model: {
|
|
931
|
+
id: string;
|
|
932
|
+
type: string;
|
|
933
|
+
rpcDriverName: string | undefined;
|
|
934
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
935
|
+
rendererTypeName: string;
|
|
936
|
+
error: unknown;
|
|
937
|
+
statusMessage: string | undefined;
|
|
938
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
939
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
940
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
941
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
942
|
+
}, {
|
|
943
|
+
rendererTypeName: string;
|
|
944
|
+
error: unknown;
|
|
945
|
+
statusMessage: string | undefined;
|
|
946
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
947
|
+
onHorizontalScroll?: () => void;
|
|
948
|
+
blockState?: Record<string, any>;
|
|
949
|
+
}>;
|
|
950
|
+
readonly DisplayBlurb: React.FC<{
|
|
951
|
+
model: {
|
|
952
|
+
id: string;
|
|
953
|
+
type: string;
|
|
954
|
+
rpcDriverName: string | undefined;
|
|
955
|
+
} & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
956
|
+
rendererTypeName: string;
|
|
957
|
+
error: unknown;
|
|
958
|
+
statusMessage: string | undefined;
|
|
959
|
+
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
960
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
961
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
962
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
963
|
+
}, {
|
|
964
|
+
rendererTypeName: string;
|
|
965
|
+
error: unknown;
|
|
966
|
+
statusMessage: string | undefined;
|
|
967
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
968
|
+
}> | null;
|
|
969
|
+
readonly adapterConfig: any;
|
|
970
|
+
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
971
|
+
readonly parentDisplay: any;
|
|
972
|
+
readonly effectiveRpcDriverName: any;
|
|
973
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
974
|
+
};
|
|
975
|
+
readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
|
|
976
|
+
readonly DisplayMessageComponent: undefined | React.FC<any>;
|
|
977
|
+
trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
|
|
978
|
+
readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
|
|
979
|
+
regionCannotBeRendered(): null;
|
|
980
|
+
} & {
|
|
981
|
+
setStatusMessage(arg?: string): void;
|
|
982
|
+
setError(error?: unknown): void;
|
|
983
|
+
setRpcDriverName(rpcDriverName: string): void;
|
|
984
|
+
reload(): void;
|
|
985
|
+
} & {
|
|
986
|
+
scrollTop: number;
|
|
987
|
+
} & {
|
|
988
|
+
readonly height: number;
|
|
989
|
+
} & {
|
|
990
|
+
setScrollTop(scrollTop: number): void;
|
|
991
|
+
setHeight(displayHeight: number): number;
|
|
992
|
+
resizeHeight(distance: number): number;
|
|
993
|
+
} & {
|
|
994
|
+
featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
|
|
995
|
+
featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
|
|
996
|
+
currStatsBpPerPx: number;
|
|
997
|
+
} & {
|
|
998
|
+
readonly currentBytesRequested: number;
|
|
999
|
+
readonly currentFeatureScreenDensity: number;
|
|
1000
|
+
readonly maxFeatureScreenDensity: any;
|
|
1001
|
+
readonly featureDensityStatsReady: boolean;
|
|
1002
|
+
readonly maxAllowableBytes: number;
|
|
1003
|
+
} & {
|
|
1004
|
+
afterAttach(): void;
|
|
1005
|
+
} & {
|
|
1006
|
+
setCurrStatsBpPerPx(n: number): void;
|
|
1007
|
+
setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
|
|
1008
|
+
getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
|
|
1009
|
+
setFeatureDensityStatsP(arg: any): void;
|
|
1010
|
+
setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
|
|
1011
|
+
clearFeatureDensityStats(): void;
|
|
1012
|
+
} & {
|
|
1013
|
+
readonly regionTooLarge: boolean;
|
|
1014
|
+
readonly regionTooLargeReason: string;
|
|
1015
|
+
} & {
|
|
1016
|
+
readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
|
|
1017
|
+
regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
|
|
1018
|
+
regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
|
|
1019
|
+
} & {
|
|
1020
|
+
mouseoverExtraInformation: string | undefined;
|
|
1021
|
+
featureIdUnderMouse: undefined | string;
|
|
1022
|
+
subfeatureIdUnderMouse: undefined | string;
|
|
1023
|
+
contextMenuFeature: undefined | import("@jbrowse/core/util").Feature;
|
|
1024
|
+
} & {
|
|
1025
|
+
readonly DisplayMessageComponent: undefined | React.FC<any>;
|
|
1026
|
+
readonly blockType: "staticBlocks" | "dynamicBlocks";
|
|
1027
|
+
readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
|
|
1028
|
+
} & {
|
|
1029
|
+
readonly renderDelay: number;
|
|
1030
|
+
readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
|
|
1031
|
+
legendItems(_theme?: import("@mui/material").Theme): import("../index.ts").LegendItem[];
|
|
1032
|
+
svgLegendWidth(theme?: import("@mui/material").Theme): number;
|
|
1033
|
+
readonly selectedFeatureId: string | undefined;
|
|
1034
|
+
readonly featureWidgetType: {
|
|
1035
|
+
type: string;
|
|
1036
|
+
id: string;
|
|
1037
|
+
};
|
|
1038
|
+
} & {
|
|
1039
|
+
readonly showTooltipsEnabled: boolean;
|
|
1040
|
+
readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
|
|
1041
|
+
readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
|
|
1042
|
+
getFeatureById(featureId: string, parentFeatureId?: string): import("@jbrowse/core/util").Feature | undefined;
|
|
1043
|
+
readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("../BaseLinearDisplay/types.ts").LayoutRecord>;
|
|
1044
|
+
getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
|
|
1045
|
+
getFeatureByID(blockKey: string, id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
|
|
1046
|
+
searchFeatureByID(id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
|
|
1047
|
+
readonly floatingLabelData: Map<string, import("../BaseLinearDisplay/components/util.ts").FeatureLabelData>;
|
|
1048
|
+
} & {
|
|
1049
|
+
addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
|
|
1050
|
+
deleteBlock(key: string): void;
|
|
1051
|
+
selectFeature(feature: import("@jbrowse/core/util").Feature): void;
|
|
1052
|
+
navToFeature(feature: import("@jbrowse/core/util").Feature): void;
|
|
1053
|
+
clearFeatureSelection(): void;
|
|
1054
|
+
setFeatureIdUnderMouse(feature?: string): void;
|
|
1055
|
+
setSubfeatureIdUnderMouse(subfeatureId?: string): void;
|
|
1056
|
+
setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature): void;
|
|
1057
|
+
setMouseoverExtraInformation(extra?: string): void;
|
|
1058
|
+
setShowLegend(s: boolean): void;
|
|
1059
|
+
setShowTooltips(arg: boolean): void;
|
|
1060
|
+
} & {
|
|
1061
|
+
reload(): Promise<void>;
|
|
1062
|
+
} & {
|
|
1063
|
+
selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
|
|
1064
|
+
setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
|
|
1065
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
1066
|
+
onMouseMove(_: unknown, featureId?: string): void;
|
|
1067
|
+
onMouseLeave(_: unknown): void;
|
|
1068
|
+
onContextMenu(_: unknown): void;
|
|
1069
|
+
};
|
|
204
1070
|
renderProps(): any;
|
|
205
1071
|
} & {
|
|
206
|
-
renderSvg(opts: import("../
|
|
1072
|
+
renderSvg(opts: import("../index.ts").ExportSvgDisplayOptions): Promise<import("react/jsx-runtime").JSX.Element>;
|
|
207
1073
|
afterAttach(): void;
|
|
208
1074
|
} & {
|
|
209
|
-
readonly rendererConfig:
|
|
210
|
-
[x: string]: any;
|
|
211
|
-
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
212
|
-
setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
|
|
213
|
-
[x: string]: any;
|
|
214
|
-
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
215
|
-
setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
|
|
216
|
-
[x: string]: any;
|
|
217
|
-
} & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
|
|
218
|
-
} & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
|
|
219
|
-
} & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>;
|
|
1075
|
+
readonly rendererConfig: Omit<any, symbol>;
|
|
220
1076
|
readonly rendererTypeName: any;
|
|
221
1077
|
} & {
|
|
222
1078
|
renderProps(): any;
|
|
223
1079
|
}, {
|
|
224
1080
|
type: string;
|
|
225
|
-
} & Partial<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
|
|
226
|
-
id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
227
|
-
type: import("mobx-state-tree").ISimpleType<string>;
|
|
228
|
-
rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
|
|
1081
|
+
} & Partial<import("@jbrowse/mobx-state-tree/dist/internal").ExtractCFromProps<{
|
|
1082
|
+
id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
1083
|
+
type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
1084
|
+
rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
|
|
229
1085
|
} & {
|
|
230
|
-
heightPreConfig: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
|
|
1086
|
+
heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
|
|
231
1087
|
} & {
|
|
232
|
-
userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
|
|
233
|
-
userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
|
|
1088
|
+
userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
|
|
1089
|
+
userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
|
|
234
1090
|
} & {
|
|
235
|
-
blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
|
|
236
|
-
key: import("mobx-state-tree").ISimpleType<string>;
|
|
237
|
-
region: import("mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
|
|
238
|
-
reloadFlag: import("mobx-state-tree").IType<number | undefined, number, number>;
|
|
239
|
-
isLeftEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
240
|
-
isRightEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
1091
|
+
blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
1092
|
+
key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
|
|
1093
|
+
region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
|
|
1094
|
+
reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
|
|
1095
|
+
isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
1096
|
+
isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
241
1097
|
}, {
|
|
242
|
-
stopToken:
|
|
1098
|
+
stopToken: import("@jbrowse/core/util").StopToken | undefined;
|
|
243
1099
|
filled: boolean;
|
|
244
1100
|
reactElement: React.ReactElement | undefined;
|
|
245
1101
|
features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
|
|
246
1102
|
layout: any;
|
|
247
|
-
|
|
1103
|
+
blockStatusMessage: string;
|
|
248
1104
|
error: unknown;
|
|
249
1105
|
message: string | undefined;
|
|
250
1106
|
maxHeightReached: boolean;
|
|
@@ -252,25 +1108,32 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
|
|
|
252
1108
|
model: {
|
|
253
1109
|
error?: unknown;
|
|
254
1110
|
reload: () => void;
|
|
255
|
-
message
|
|
256
|
-
|
|
257
|
-
status?: string;
|
|
1111
|
+
message?: React.ReactNode;
|
|
1112
|
+
statusMessage?: string;
|
|
258
1113
|
reactElement?: React.ReactElement;
|
|
1114
|
+
isRenderingPending?: boolean;
|
|
259
1115
|
};
|
|
260
|
-
}) => import("react/jsx-runtime").JSX.Element
|
|
1116
|
+
}) => import("react/jsx-runtime").JSX.Element;
|
|
261
1117
|
renderProps: any;
|
|
1118
|
+
renderArgs: Record<string, unknown> | undefined;
|
|
1119
|
+
isRenderingPending: boolean;
|
|
1120
|
+
cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
|
|
262
1121
|
} & {
|
|
263
1122
|
doReload(): void;
|
|
264
|
-
|
|
265
|
-
|
|
266
|
-
setLoading(newStopToken: string): void;
|
|
1123
|
+
setStatusMessage(message: string): void;
|
|
1124
|
+
setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
|
|
267
1125
|
setMessage(messageText: string): void;
|
|
268
|
-
setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock").RenderedProps | undefined): void;
|
|
1126
|
+
setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
|
|
269
1127
|
setError(error: unknown): void;
|
|
270
1128
|
reload(): void;
|
|
1129
|
+
setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
|
|
271
1130
|
beforeDestroy(): void;
|
|
272
|
-
}
|
|
273
|
-
|
|
1131
|
+
} & {
|
|
1132
|
+
readonly statusMessage: any;
|
|
1133
|
+
} & {
|
|
1134
|
+
afterAttach(): void;
|
|
1135
|
+
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
1136
|
+
configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
|
|
274
1137
|
maxFeatureScreenDensity: {
|
|
275
1138
|
type: string;
|
|
276
1139
|
description: string;
|
|
@@ -297,13 +1160,17 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
|
|
|
297
1160
|
description: string;
|
|
298
1161
|
defaultValue: never[];
|
|
299
1162
|
};
|
|
300
|
-
}, import("
|
|
301
|
-
|
|
302
|
-
|
|
1163
|
+
}, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
|
|
1164
|
+
showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
|
|
1165
|
+
showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
|
|
1166
|
+
}>> & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & import("@jbrowse/mobx-state-tree")._NotCustomized, {
|
|
303
1167
|
id: string;
|
|
304
|
-
|
|
1168
|
+
type: string;
|
|
1169
|
+
configuration: import("@jbrowse/mobx-state-tree").ModelSnapshotType<Record<string, any>>;
|
|
305
1170
|
rpcDriverName: string | undefined;
|
|
306
1171
|
heightPreConfig: number | undefined;
|
|
307
1172
|
userBpPerPxLimit: number | undefined;
|
|
308
1173
|
userByteSizeLimit: number | undefined;
|
|
309
|
-
|
|
1174
|
+
showLegend: boolean | undefined;
|
|
1175
|
+
showTooltips: boolean | undefined;
|
|
1176
|
+
} & import("@jbrowse/mobx-state-tree")._NotCustomized>;
|