@jbrowse/plugin-linear-genome-view 3.6.5 → 4.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (392) hide show
  1. package/esm/BaseLinearDisplay/SVGLegend.d.ts +6 -0
  2. package/esm/BaseLinearDisplay/SVGLegend.js +17 -0
  3. package/esm/BaseLinearDisplay/calculateSvgLegendWidth.d.ts +2 -0
  4. package/esm/BaseLinearDisplay/calculateSvgLegendWidth.js +11 -0
  5. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +3 -3
  6. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js +13 -24
  7. package/esm/BaseLinearDisplay/components/Block.js +2 -2
  8. package/esm/BaseLinearDisplay/components/BlockErrorMessage.js +2 -2
  9. package/esm/BaseLinearDisplay/components/BlockMsg.js +11 -2
  10. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/CollapseIntronsDialog.d.ts +9 -0
  11. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/CollapseIntronsDialog.js +42 -0
  12. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/TranscriptTable.d.ts +11 -0
  13. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/TranscriptTable.js +40 -0
  14. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/util.d.ts +19 -0
  15. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/util.js +45 -0
  16. package/esm/BaseLinearDisplay/components/FloatingLabels.d.ts +5 -0
  17. package/esm/BaseLinearDisplay/components/FloatingLabels.js +89 -0
  18. package/esm/BaseLinearDisplay/components/FloatingLegend.d.ts +8 -0
  19. package/esm/BaseLinearDisplay/components/FloatingLegend.js +43 -0
  20. package/esm/BaseLinearDisplay/components/LinearBlocks.d.ts +1 -5
  21. package/esm/BaseLinearDisplay/components/LinearBlocks.js +5 -42
  22. package/esm/BaseLinearDisplay/components/LoadingOverlay.d.ts +4 -0
  23. package/esm/BaseLinearDisplay/components/LoadingOverlay.js +49 -0
  24. package/esm/BaseLinearDisplay/components/MaxHeightReachedIndicator.d.ts +4 -0
  25. package/esm/BaseLinearDisplay/components/MaxHeightReachedIndicator.js +26 -0
  26. package/esm/BaseLinearDisplay/components/MenuPage.d.ts +8 -0
  27. package/esm/BaseLinearDisplay/components/MenuPage.js +24 -0
  28. package/esm/BaseLinearDisplay/components/NonBlockCanvasDisplayComponent.d.ts +19 -0
  29. package/esm/BaseLinearDisplay/components/NonBlockCanvasDisplayComponent.js +48 -0
  30. package/esm/BaseLinearDisplay/components/RenderedBlocks.d.ts +12 -0
  31. package/esm/BaseLinearDisplay/components/RenderedBlocks.js +22 -0
  32. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.d.ts +4 -4
  33. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +5 -8
  34. package/esm/BaseLinearDisplay/components/TooLargeMessage.js +3 -3
  35. package/esm/BaseLinearDisplay/components/Tooltip.d.ts +2 -0
  36. package/esm/BaseLinearDisplay/components/Tooltip.js +10 -7
  37. package/esm/BaseLinearDisplay/components/types.d.ts +1 -0
  38. package/esm/BaseLinearDisplay/components/types.js +1 -0
  39. package/esm/BaseLinearDisplay/components/util.d.ts +21 -0
  40. package/esm/BaseLinearDisplay/components/util.js +116 -0
  41. package/esm/BaseLinearDisplay/index.d.ts +17 -8
  42. package/esm/BaseLinearDisplay/index.js +13 -6
  43. package/esm/BaseLinearDisplay/model.d.ts +1177 -0
  44. package/esm/BaseLinearDisplay/model.js +424 -0
  45. package/esm/BaseLinearDisplay/models/FeatureDensityMixin.d.ts +5 -5
  46. package/esm/BaseLinearDisplay/models/FeatureDensityMixin.js +11 -14
  47. package/esm/BaseLinearDisplay/models/NonBlockCanvasDisplayMixin.d.ts +21 -0
  48. package/esm/BaseLinearDisplay/models/NonBlockCanvasDisplayMixin.js +46 -0
  49. package/esm/BaseLinearDisplay/models/TrackHeightMixin.d.ts +3 -3
  50. package/esm/BaseLinearDisplay/models/TrackHeightMixin.js +2 -3
  51. package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.d.ts +1 -1
  52. package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.js +2 -3
  53. package/esm/BaseLinearDisplay/models/calculateLabelPositions.d.ts +24 -0
  54. package/esm/BaseLinearDisplay/models/calculateLabelPositions.js +60 -0
  55. package/esm/BaseLinearDisplay/models/configSchema.d.ts +2 -2
  56. package/esm/BaseLinearDisplay/models/configSchema.js +3 -3
  57. package/esm/BaseLinearDisplay/models/renderSvg.d.ts +3 -7
  58. package/esm/BaseLinearDisplay/models/renderSvg.js +22 -11
  59. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +37 -19
  60. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js +151 -135
  61. package/esm/BaseLinearDisplay/models/util.d.ts +4 -4
  62. package/esm/BaseLinearDisplay/models/util.js +16 -13
  63. package/esm/BaseLinearDisplay/renderSvg.d.ts +3 -0
  64. package/esm/BaseLinearDisplay/renderSvg.js +59 -0
  65. package/esm/BaseLinearDisplay/types.d.ts +47 -0
  66. package/esm/BaseLinearDisplay/types.js +3 -0
  67. package/esm/BaseLinearDisplay/util.d.ts +15 -0
  68. package/esm/BaseLinearDisplay/util.js +61 -0
  69. package/esm/BasicTrack/configSchema.d.ts +16 -11
  70. package/esm/BasicTrack/index.js +1 -1
  71. package/esm/FeatureTrack/configSchema.d.ts +16 -11
  72. package/esm/FeatureTrack/index.js +1 -1
  73. package/esm/LaunchLinearGenomeView/index.js +12 -62
  74. package/esm/LinearBareDisplay/configSchema.d.ts +4 -4
  75. package/esm/LinearBareDisplay/configSchema.js +1 -1
  76. package/esm/LinearBareDisplay/index.d.ts +2 -2
  77. package/esm/LinearBareDisplay/index.js +5 -5
  78. package/esm/LinearBareDisplay/model.d.ts +959 -92
  79. package/esm/LinearBareDisplay/model.js +3 -6
  80. package/esm/LinearBasicDisplay/components/LinearBasicDisplayComponent.d.ts +5 -0
  81. package/esm/LinearBasicDisplay/components/LinearBasicDisplayComponent.js +9 -0
  82. package/esm/LinearBasicDisplay/configSchema.d.ts +4 -4
  83. package/esm/LinearBasicDisplay/configSchema.js +1 -1
  84. package/esm/LinearBasicDisplay/index.d.ts +2 -2
  85. package/esm/LinearBasicDisplay/index.js +6 -6
  86. package/esm/LinearBasicDisplay/model.d.ts +1134 -122
  87. package/esm/LinearBasicDisplay/model.js +116 -116
  88. package/esm/{LinearBasicDisplay → LinearFeatureDisplay}/components/AddFiltersDialog.js +2 -2
  89. package/esm/{LinearBasicDisplay → LinearFeatureDisplay}/components/SetMaxHeightDialog.js +3 -3
  90. package/{dist/LinearBasicDisplay → esm/LinearFeatureDisplay}/configSchema.d.ts +4 -4
  91. package/esm/LinearFeatureDisplay/configSchema.js +11 -0
  92. package/esm/LinearFeatureDisplay/index.d.ts +3 -0
  93. package/esm/LinearFeatureDisplay/index.js +2 -0
  94. package/esm/LinearFeatureDisplay/model.d.ts +1415 -0
  95. package/esm/LinearFeatureDisplay/model.js +265 -0
  96. package/esm/LinearGenomeView/SVGErrorBox.d.ts +5 -0
  97. package/esm/LinearGenomeView/SVGErrorBox.js +4 -0
  98. package/esm/LinearGenomeView/afterAttach.d.ts +5 -0
  99. package/esm/LinearGenomeView/afterAttach.js +95 -0
  100. package/esm/LinearGenomeView/components/CenterLine.js +6 -4
  101. package/esm/LinearGenomeView/components/Cytobands.js +4 -4
  102. package/esm/LinearGenomeView/components/ExportSvgDialog.d.ts +1 -1
  103. package/esm/LinearGenomeView/components/ExportSvgDialog.js +5 -1
  104. package/esm/LinearGenomeView/components/GetSequenceDialog.d.ts +8 -2
  105. package/esm/LinearGenomeView/components/GetSequenceDialog.js +13 -16
  106. package/esm/LinearGenomeView/components/Gridlines.js +18 -15
  107. package/esm/LinearGenomeView/components/Header.js +9 -9
  108. package/esm/LinearGenomeView/components/HeaderPanControls.js +2 -2
  109. package/esm/LinearGenomeView/components/HeaderRegionWidth.js +4 -5
  110. package/esm/LinearGenomeView/components/HeaderTrackSelectorButton.js +2 -2
  111. package/esm/LinearGenomeView/components/HeaderZoomControls.js +3 -3
  112. package/esm/LinearGenomeView/components/Highlight.d.ts +1 -1
  113. package/esm/LinearGenomeView/components/Highlight.js +6 -6
  114. package/esm/LinearGenomeView/components/ImportForm.d.ts +1 -1
  115. package/esm/LinearGenomeView/components/ImportForm.js +14 -12
  116. package/esm/LinearGenomeView/components/ImportFormRefNameAutocomplete.js +3 -3
  117. package/esm/LinearGenomeView/components/LinearGenomeView.js +7 -7
  118. package/esm/LinearGenomeView/components/LinearGenomeViewContainer.js +7 -8
  119. package/esm/LinearGenomeView/components/MiniControls.js +6 -6
  120. package/esm/LinearGenomeView/components/NoTracksActiveButton.js +2 -2
  121. package/esm/LinearGenomeView/components/OverviewHighlight.d.ts +1 -1
  122. package/esm/LinearGenomeView/components/OverviewHighlight.js +5 -5
  123. package/esm/LinearGenomeView/components/OverviewRubberband.js +4 -4
  124. package/esm/LinearGenomeView/components/OverviewRubberbandHoverTooltip.js +9 -5
  125. package/esm/LinearGenomeView/components/OverviewScalebar.js +36 -28
  126. package/esm/LinearGenomeView/components/OverviewScalebarPolygon.js +5 -5
  127. package/esm/LinearGenomeView/components/OverviewScalebarTickLabels.js +7 -7
  128. package/esm/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js +1 -1
  129. package/esm/LinearGenomeView/components/RefNameAutocomplete/index.d.ts +1 -1
  130. package/esm/LinearGenomeView/components/RefNameAutocomplete/index.js +10 -10
  131. package/esm/LinearGenomeView/components/RegionWidthEditorDialog.d.ts +1 -1
  132. package/esm/LinearGenomeView/components/RegionWidthEditorDialog.js +6 -4
  133. package/esm/LinearGenomeView/components/Rubberband.js +9 -7
  134. package/esm/LinearGenomeView/components/RubberbandSpan.js +4 -5
  135. package/esm/LinearGenomeView/components/Scalebar.js +8 -10
  136. package/esm/LinearGenomeView/components/ScalebarCoordinateLabels.d.ts +1 -1
  137. package/esm/LinearGenomeView/components/ScalebarCoordinateLabels.js +50 -17
  138. package/esm/LinearGenomeView/components/ScalebarRefNameLabels.d.ts +1 -1
  139. package/esm/LinearGenomeView/components/ScalebarRefNameLabels.js +13 -11
  140. package/esm/LinearGenomeView/components/SearchBox.d.ts +1 -1
  141. package/esm/LinearGenomeView/components/SearchBox.js +8 -9
  142. package/esm/LinearGenomeView/components/SearchResultsDialog.d.ts +1 -1
  143. package/esm/LinearGenomeView/components/SearchResultsDialog.js +2 -2
  144. package/esm/LinearGenomeView/components/SearchResultsTable.d.ts +1 -1
  145. package/esm/LinearGenomeView/components/SearchResultsTable.js +4 -6
  146. package/esm/LinearGenomeView/components/SequenceSearchDialog.js +6 -6
  147. package/esm/LinearGenomeView/components/TrackContainer.js +32 -20
  148. package/esm/LinearGenomeView/components/TrackLabel.js +10 -11
  149. package/esm/LinearGenomeView/components/TrackLabelContainer.js +7 -8
  150. package/esm/LinearGenomeView/components/TrackLabelDragHandle.js +1 -1
  151. package/esm/LinearGenomeView/components/TrackLabelMenu.js +80 -68
  152. package/esm/LinearGenomeView/components/TrackRenderingContainer.d.ts +1 -2
  153. package/esm/LinearGenomeView/components/TrackRenderingContainer.js +5 -5
  154. package/esm/LinearGenomeView/components/TracksContainer.js +18 -15
  155. package/esm/LinearGenomeView/components/VerticalGuide.js +5 -3
  156. package/esm/LinearGenomeView/components/fetchSequence.d.ts +7 -2
  157. package/esm/LinearGenomeView/components/useRangeSelect.d.ts +27 -2
  158. package/esm/LinearGenomeView/components/useRangeSelect.js +26 -20
  159. package/esm/LinearGenomeView/components/useWheelScroll.js +22 -12
  160. package/esm/LinearGenomeView/components/util.d.ts +2 -13
  161. package/esm/LinearGenomeView/components/util.js +12 -31
  162. package/esm/LinearGenomeView/index.d.ts +1 -1
  163. package/esm/LinearGenomeView/index.js +3 -3
  164. package/esm/LinearGenomeView/keyboardHandler.d.ts +2 -0
  165. package/esm/LinearGenomeView/keyboardHandler.js +29 -0
  166. package/esm/LinearGenomeView/menuItems.d.ts +7 -0
  167. package/esm/LinearGenomeView/menuItems.js +299 -0
  168. package/esm/LinearGenomeView/model.d.ts +92 -89
  169. package/esm/LinearGenomeView/model.js +166 -414
  170. package/esm/LinearGenomeView/svgExportUtil.d.ts +9 -0
  171. package/esm/LinearGenomeView/svgExportUtil.js +6 -0
  172. package/{dist/LinearGenomeView/svgcomponents/SVGRegionSeparators.d.ts → esm/LinearGenomeView/svgcomponents/SVGGridlines.d.ts} +2 -2
  173. package/esm/LinearGenomeView/svgcomponents/SVGGridlines.js +20 -0
  174. package/esm/LinearGenomeView/svgcomponents/SVGHeader.js +5 -5
  175. package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.d.ts +4 -3
  176. package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js +24 -12
  177. package/esm/LinearGenomeView/svgcomponents/SVGRuler.js +13 -5
  178. package/esm/LinearGenomeView/svgcomponents/SVGTracks.js +2 -2
  179. package/esm/LinearGenomeView/types.d.ts +5 -1
  180. package/esm/LinearGenomeView/util.d.ts +2 -2
  181. package/esm/LinearGenomeView/util.js +8 -6
  182. package/esm/index.d.ts +975 -94
  183. package/esm/index.js +37 -38
  184. package/esm/searchUtils.d.ts +1 -1
  185. package/esm/searchUtils.js +6 -4
  186. package/package.json +28 -33
  187. package/dist/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +0 -8
  188. package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js +0 -72
  189. package/dist/BaseLinearDisplay/components/Block.d.ts +0 -14
  190. package/dist/BaseLinearDisplay/components/Block.js +0 -50
  191. package/dist/BaseLinearDisplay/components/BlockErrorMessage.d.ts +0 -7
  192. package/dist/BaseLinearDisplay/components/BlockErrorMessage.js +0 -27
  193. package/dist/BaseLinearDisplay/components/BlockLoadingMessage.d.ts +0 -6
  194. package/dist/BaseLinearDisplay/components/BlockLoadingMessage.js +0 -26
  195. package/dist/BaseLinearDisplay/components/BlockMsg.d.ts +0 -6
  196. package/dist/BaseLinearDisplay/components/BlockMsg.js +0 -20
  197. package/dist/BaseLinearDisplay/components/LinearBlocks.d.ts +0 -9
  198. package/dist/BaseLinearDisplay/components/LinearBlocks.js +0 -61
  199. package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.d.ts +0 -11
  200. package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +0 -59
  201. package/dist/BaseLinearDisplay/components/TooLargeMessage.d.ts +0 -10
  202. package/dist/BaseLinearDisplay/components/TooLargeMessage.js +0 -25
  203. package/dist/BaseLinearDisplay/components/Tooltip.d.ts +0 -11
  204. package/dist/BaseLinearDisplay/components/Tooltip.js +0 -24
  205. package/dist/BaseLinearDisplay/index.d.ts +0 -8
  206. package/dist/BaseLinearDisplay/index.js +0 -20
  207. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +0 -311
  208. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js +0 -325
  209. package/dist/BaseLinearDisplay/models/FeatureDensityMixin.d.ts +0 -32
  210. package/dist/BaseLinearDisplay/models/FeatureDensityMixin.js +0 -122
  211. package/dist/BaseLinearDisplay/models/TrackHeightMixin.d.ts +0 -11
  212. package/dist/BaseLinearDisplay/models/TrackHeightMixin.js +0 -35
  213. package/dist/BaseLinearDisplay/models/autorunFeatureDensityStats.d.ts +0 -2
  214. package/dist/BaseLinearDisplay/models/autorunFeatureDensityStats.js +0 -33
  215. package/dist/BaseLinearDisplay/models/configSchema.d.ts +0 -29
  216. package/dist/BaseLinearDisplay/models/configSchema.js +0 -35
  217. package/dist/BaseLinearDisplay/models/renderSvg.d.ts +0 -7
  218. package/dist/BaseLinearDisplay/models/renderSvg.js +0 -80
  219. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +0 -78
  220. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js +0 -229
  221. package/dist/BaseLinearDisplay/models/util.d.ts +0 -22
  222. package/dist/BaseLinearDisplay/models/util.js +0 -45
  223. package/dist/BasicTrack/configSchema.d.ts +0 -80
  224. package/dist/BasicTrack/configSchema.js +0 -10
  225. package/dist/BasicTrack/index.d.ts +0 -2
  226. package/dist/BasicTrack/index.js +0 -18
  227. package/dist/FeatureTrack/configSchema.d.ts +0 -80
  228. package/dist/FeatureTrack/configSchema.js +0 -10
  229. package/dist/FeatureTrack/index.d.ts +0 -2
  230. package/dist/FeatureTrack/index.js +0 -19
  231. package/dist/LaunchLinearGenomeView/index.d.ts +0 -2
  232. package/dist/LaunchLinearGenomeView/index.js +0 -70
  233. package/dist/LinearBareDisplay/configSchema.d.ts +0 -32
  234. package/dist/LinearBareDisplay/configSchema.js +0 -13
  235. package/dist/LinearBareDisplay/index.d.ts +0 -4
  236. package/dist/LinearBareDisplay/index.js +0 -26
  237. package/dist/LinearBareDisplay/model.d.ts +0 -309
  238. package/dist/LinearBareDisplay/model.js +0 -38
  239. package/dist/LinearBasicDisplay/components/AddFiltersDialog.js +0 -61
  240. package/dist/LinearBasicDisplay/components/SetMaxHeightDialog.js +0 -28
  241. package/dist/LinearBasicDisplay/configSchema.js +0 -13
  242. package/dist/LinearBasicDisplay/index.d.ts +0 -4
  243. package/dist/LinearBasicDisplay/index.js +0 -29
  244. package/dist/LinearBasicDisplay/model.d.ts +0 -346
  245. package/dist/LinearBasicDisplay/model.js +0 -192
  246. package/dist/LinearGenomeView/components/CenterLine.d.ts +0 -6
  247. package/dist/LinearGenomeView/components/CenterLine.js +0 -38
  248. package/dist/LinearGenomeView/components/Cytobands.d.ts +0 -9
  249. package/dist/LinearGenomeView/components/Cytobands.js +0 -89
  250. package/dist/LinearGenomeView/components/ExportSvgDialog.d.ts +0 -7
  251. package/dist/LinearGenomeView/components/ExportSvgDialog.js +0 -57
  252. package/dist/LinearGenomeView/components/GetSequenceDialog.d.ts +0 -6
  253. package/dist/LinearGenomeView/components/GetSequenceDialog.js +0 -109
  254. package/dist/LinearGenomeView/components/Gridlines.d.ts +0 -7
  255. package/dist/LinearGenomeView/components/Gridlines.js +0 -70
  256. package/dist/LinearGenomeView/components/Header.d.ts +0 -5
  257. package/dist/LinearGenomeView/components/Header.js +0 -38
  258. package/dist/LinearGenomeView/components/HeaderPanControls.d.ts +0 -6
  259. package/dist/LinearGenomeView/components/HeaderPanControls.js +0 -27
  260. package/dist/LinearGenomeView/components/HeaderRegionWidth.d.ts +0 -5
  261. package/dist/LinearGenomeView/components/HeaderRegionWidth.js +0 -21
  262. package/dist/LinearGenomeView/components/HeaderTrackSelectorButton.d.ts +0 -5
  263. package/dist/LinearGenomeView/components/HeaderTrackSelectorButton.js +0 -19
  264. package/dist/LinearGenomeView/components/HeaderZoomControls.d.ts +0 -5
  265. package/dist/LinearGenomeView/components/HeaderZoomControls.js +0 -109
  266. package/dist/LinearGenomeView/components/Highlight.d.ts +0 -12
  267. package/dist/LinearGenomeView/components/Highlight.js +0 -95
  268. package/dist/LinearGenomeView/components/ImportForm.d.ts +0 -6
  269. package/dist/LinearGenomeView/components/ImportForm.js +0 -80
  270. package/dist/LinearGenomeView/components/ImportFormRefNameAutocomplete.d.ts +0 -11
  271. package/dist/LinearGenomeView/components/ImportFormRefNameAutocomplete.js +0 -32
  272. package/dist/LinearGenomeView/components/LinearGenomeView.d.ts +0 -5
  273. package/dist/LinearGenomeView/components/LinearGenomeView.js +0 -57
  274. package/dist/LinearGenomeView/components/LinearGenomeViewContainer.d.ts +0 -5
  275. package/dist/LinearGenomeView/components/LinearGenomeViewContainer.js +0 -98
  276. package/dist/LinearGenomeView/components/MiniControls.d.ts +0 -5
  277. package/dist/LinearGenomeView/components/MiniControls.js +0 -36
  278. package/dist/LinearGenomeView/components/NoTracksActiveButton.d.ts +0 -5
  279. package/dist/LinearGenomeView/components/NoTracksActiveButton.js +0 -23
  280. package/dist/LinearGenomeView/components/OverviewHighlight.d.ts +0 -8
  281. package/dist/LinearGenomeView/components/OverviewHighlight.js +0 -50
  282. package/dist/LinearGenomeView/components/OverviewRubberband.d.ts +0 -9
  283. package/dist/LinearGenomeView/components/OverviewRubberband.js +0 -113
  284. package/dist/LinearGenomeView/components/OverviewRubberbandHoverTooltip.d.ts +0 -10
  285. package/dist/LinearGenomeView/components/OverviewRubberbandHoverTooltip.js +0 -28
  286. package/dist/LinearGenomeView/components/OverviewScalebar.d.ts +0 -7
  287. package/dist/LinearGenomeView/components/OverviewScalebar.js +0 -146
  288. package/dist/LinearGenomeView/components/OverviewScalebarPolygon.d.ts +0 -8
  289. package/dist/LinearGenomeView/components/OverviewScalebarPolygon.js +0 -41
  290. package/dist/LinearGenomeView/components/OverviewScalebarTickLabels.d.ts +0 -10
  291. package/dist/LinearGenomeView/components/OverviewScalebarTickLabels.js +0 -37
  292. package/dist/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.d.ts +0 -8
  293. package/dist/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.js +0 -18
  294. package/dist/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.d.ts +0 -3
  295. package/dist/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js +0 -56
  296. package/dist/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.d.ts +0 -3
  297. package/dist/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.js +0 -11
  298. package/dist/LinearGenomeView/components/RefNameAutocomplete/index.d.ts +0 -16
  299. package/dist/LinearGenomeView/components/RefNameAutocomplete/index.js +0 -127
  300. package/dist/LinearGenomeView/components/RefNameAutocomplete/util.d.ts +0 -10
  301. package/dist/LinearGenomeView/components/RefNameAutocomplete/util.js +0 -53
  302. package/dist/LinearGenomeView/components/RegionWidthEditorDialog.d.ts +0 -6
  303. package/dist/LinearGenomeView/components/RegionWidthEditorDialog.js +0 -30
  304. package/dist/LinearGenomeView/components/Rubberband.d.ts +0 -7
  305. package/dist/LinearGenomeView/components/Rubberband.js +0 -35
  306. package/dist/LinearGenomeView/components/RubberbandSpan.d.ts +0 -15
  307. package/dist/LinearGenomeView/components/RubberbandSpan.js +0 -39
  308. package/dist/LinearGenomeView/components/RubberbandTooltip.d.ts +0 -5
  309. package/dist/LinearGenomeView/components/RubberbandTooltip.js +0 -20
  310. package/dist/LinearGenomeView/components/Scalebar.d.ts +0 -10
  311. package/dist/LinearGenomeView/components/Scalebar.js +0 -40
  312. package/dist/LinearGenomeView/components/ScalebarCoordinateLabels.d.ts +0 -6
  313. package/dist/LinearGenomeView/components/ScalebarCoordinateLabels.js +0 -29
  314. package/dist/LinearGenomeView/components/ScalebarCoordinateTicks.d.ts +0 -6
  315. package/dist/LinearGenomeView/components/ScalebarCoordinateTicks.js +0 -38
  316. package/dist/LinearGenomeView/components/ScalebarRefNameLabels.d.ts +0 -6
  317. package/dist/LinearGenomeView/components/ScalebarRefNameLabels.js +0 -46
  318. package/dist/LinearGenomeView/components/SearchBox.d.ts +0 -6
  319. package/dist/LinearGenomeView/components/SearchBox.js +0 -88
  320. package/dist/LinearGenomeView/components/SearchResultsDialog.d.ts +0 -9
  321. package/dist/LinearGenomeView/components/SearchResultsDialog.js +0 -15
  322. package/dist/LinearGenomeView/components/SearchResultsTable.d.ts +0 -8
  323. package/dist/LinearGenomeView/components/SearchResultsTable.js +0 -74
  324. package/dist/LinearGenomeView/components/SequenceSearchDialog.d.ts +0 -8
  325. package/dist/LinearGenomeView/components/SequenceSearchDialog.js +0 -67
  326. package/dist/LinearGenomeView/components/TrackContainer.d.ts +0 -8
  327. package/dist/LinearGenomeView/components/TrackContainer.js +0 -51
  328. package/dist/LinearGenomeView/components/TrackLabel.d.ts +0 -7
  329. package/dist/LinearGenomeView/components/TrackLabel.js +0 -49
  330. package/dist/LinearGenomeView/components/TrackLabelContainer.d.ts +0 -8
  331. package/dist/LinearGenomeView/components/TrackLabelContainer.js +0 -31
  332. package/dist/LinearGenomeView/components/TrackLabelDragHandle.d.ts +0 -8
  333. package/dist/LinearGenomeView/components/TrackLabelDragHandle.js +0 -32
  334. package/dist/LinearGenomeView/components/TrackLabelMenu.d.ts +0 -5
  335. package/dist/LinearGenomeView/components/TrackLabelMenu.js +0 -93
  336. package/dist/LinearGenomeView/components/TrackRenderingContainer.d.ts +0 -9
  337. package/dist/LinearGenomeView/components/TrackRenderingContainer.js +0 -50
  338. package/dist/LinearGenomeView/components/TracksContainer.d.ts +0 -7
  339. package/dist/LinearGenomeView/components/TracksContainer.js +0 -84
  340. package/dist/LinearGenomeView/components/VerticalGuide.d.ts +0 -7
  341. package/dist/LinearGenomeView/components/VerticalGuide.js +0 -31
  342. package/dist/LinearGenomeView/components/fetchSequence.d.ts +0 -4
  343. package/dist/LinearGenomeView/components/fetchSequence.js +0 -29
  344. package/dist/LinearGenomeView/components/useRangeSelect.d.ts +0 -59
  345. package/dist/LinearGenomeView/components/useRangeSelect.js +0 -131
  346. package/dist/LinearGenomeView/components/useSideScroll.d.ts +0 -6
  347. package/dist/LinearGenomeView/components/useSideScroll.js +0 -60
  348. package/dist/LinearGenomeView/components/useWheelScroll.d.ts +0 -7
  349. package/dist/LinearGenomeView/components/useWheelScroll.js +0 -62
  350. package/dist/LinearGenomeView/components/util.d.ts +0 -25
  351. package/dist/LinearGenomeView/components/util.js +0 -49
  352. package/dist/LinearGenomeView/consts.d.ts +0 -7
  353. package/dist/LinearGenomeView/consts.js +0 -10
  354. package/dist/LinearGenomeView/index.d.ts +0 -3
  355. package/dist/LinearGenomeView/index.js +0 -53
  356. package/dist/LinearGenomeView/model.d.ts +0 -268
  357. package/dist/LinearGenomeView/model.js +0 -1109
  358. package/dist/LinearGenomeView/svgcomponents/SVGBackground.d.ts +0 -5
  359. package/dist/LinearGenomeView/svgcomponents/SVGBackground.js +0 -10
  360. package/dist/LinearGenomeView/svgcomponents/SVGHeader.d.ts +0 -7
  361. package/dist/LinearGenomeView/svgcomponents/SVGHeader.js +0 -47
  362. package/dist/LinearGenomeView/svgcomponents/SVGLinearGenomeView.d.ts +0 -6
  363. package/dist/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js +0 -42
  364. package/dist/LinearGenomeView/svgcomponents/SVGRegionSeparators.js +0 -8
  365. package/dist/LinearGenomeView/svgcomponents/SVGRuler.d.ts +0 -7
  366. package/dist/LinearGenomeView/svgcomponents/SVGRuler.js +0 -39
  367. package/dist/LinearGenomeView/svgcomponents/SVGScalebar.d.ts +0 -7
  368. package/dist/LinearGenomeView/svgcomponents/SVGScalebar.js +0 -17
  369. package/dist/LinearGenomeView/svgcomponents/SVGTrackLabel.d.ts +0 -7
  370. package/dist/LinearGenomeView/svgcomponents/SVGTrackLabel.js +0 -14
  371. package/dist/LinearGenomeView/svgcomponents/SVGTracks.d.ts +0 -21
  372. package/dist/LinearGenomeView/svgcomponents/SVGTracks.js +0 -32
  373. package/dist/LinearGenomeView/svgcomponents/util.d.ts +0 -8
  374. package/dist/LinearGenomeView/svgcomponents/util.js +0 -8
  375. package/dist/LinearGenomeView/types.d.ts +0 -43
  376. package/dist/LinearGenomeView/types.js +0 -2
  377. package/dist/LinearGenomeView/util.d.ts +0 -26
  378. package/dist/LinearGenomeView/util.js +0 -138
  379. package/dist/index.d.ts +0 -353
  380. package/dist/index.js +0 -120
  381. package/dist/searchUtils.d.ts +0 -26
  382. package/dist/searchUtils.js +0 -80
  383. package/esm/BaseLinearDisplay/components/BlockLoadingMessage.d.ts +0 -6
  384. package/esm/BaseLinearDisplay/components/BlockLoadingMessage.js +0 -24
  385. package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +0 -311
  386. package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.js +0 -286
  387. package/esm/LinearBasicDisplay/components/AddFiltersDialog.d.ts +0 -9
  388. package/esm/LinearBasicDisplay/components/SetMaxHeightDialog.d.ts +0 -8
  389. package/esm/LinearGenomeView/components/ScalebarCoordinateTicks.d.ts +0 -6
  390. package/esm/LinearGenomeView/components/ScalebarCoordinateTicks.js +0 -36
  391. /package/{dist/LinearBasicDisplay → esm/LinearFeatureDisplay}/components/AddFiltersDialog.d.ts +0 -0
  392. /package/{dist/LinearBasicDisplay → esm/LinearFeatureDisplay}/components/SetMaxHeightDialog.d.ts +0 -0
@@ -0,0 +1,1415 @@
1
+ import SerializableFilterChain from '@jbrowse/core/pluggableElementTypes/renderers/util/serializableFilterChain';
2
+ import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
3
+ import type { MenuItem } from '@jbrowse/core/ui';
4
+ import type { Feature } from '@jbrowse/core/util';
5
+ import type { Instance } from '@jbrowse/mobx-state-tree';
6
+ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): import("@jbrowse/mobx-state-tree").IModelType<{
7
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
8
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
9
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
10
+ } & {
11
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
12
+ } & {
13
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
14
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
15
+ } & {
16
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
17
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
18
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
19
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
20
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
21
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
22
+ }, {
23
+ stopToken: import("@jbrowse/core/util").StopToken | undefined;
24
+ filled: boolean;
25
+ reactElement: React.ReactElement | undefined;
26
+ features: Map<string, Feature> | undefined;
27
+ layout: any;
28
+ blockStatusMessage: string;
29
+ error: unknown;
30
+ message: string | undefined;
31
+ maxHeightReached: boolean;
32
+ ReactComponent: ({ model, }: {
33
+ model: {
34
+ error?: unknown;
35
+ reload: () => void;
36
+ message?: React.ReactNode;
37
+ statusMessage?: string;
38
+ reactElement?: React.ReactElement;
39
+ isRenderingPending?: boolean;
40
+ };
41
+ }) => import("react/jsx-runtime").JSX.Element;
42
+ renderProps: any;
43
+ renderArgs: Record<string, unknown> | undefined;
44
+ isRenderingPending: boolean;
45
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
46
+ } & {
47
+ doReload(): void;
48
+ setStatusMessage(message: string): void;
49
+ setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
50
+ setMessage(messageText: string): void;
51
+ setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
52
+ setError(error: unknown): void;
53
+ reload(): void;
54
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
55
+ beforeDestroy(): void;
56
+ } & {
57
+ readonly statusMessage: any;
58
+ } & {
59
+ afterAttach(): void;
60
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
61
+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
62
+ maxFeatureScreenDensity: {
63
+ type: string;
64
+ description: string;
65
+ defaultValue: number;
66
+ };
67
+ fetchSizeLimit: {
68
+ type: string;
69
+ defaultValue: number;
70
+ description: string;
71
+ };
72
+ height: {
73
+ type: string;
74
+ defaultValue: number;
75
+ description: string;
76
+ };
77
+ mouseover: {
78
+ type: string;
79
+ description: string;
80
+ defaultValue: string;
81
+ contextVariable: string[];
82
+ };
83
+ jexlFilters: {
84
+ type: string;
85
+ description: string;
86
+ defaultValue: never[];
87
+ };
88
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
89
+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
90
+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
91
+ } & {
92
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<"LinearFeatureDisplay">;
93
+ trackShowLabels: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
94
+ trackShowDescriptions: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
95
+ trackDisplayMode: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
96
+ trackMaxHeight: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
97
+ configuration: AnyConfigurationSchemaType;
98
+ jexlFilters: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/mobx-state-tree").ISimpleType<string>>>;
99
+ }, {
100
+ rendererTypeName: string;
101
+ error: unknown;
102
+ statusMessage: string | undefined;
103
+ } & {
104
+ readonly RenderingComponent: React.FC<{
105
+ model: {
106
+ id: string;
107
+ type: string;
108
+ rpcDriverName: string | undefined;
109
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
110
+ rendererTypeName: string;
111
+ error: unknown;
112
+ statusMessage: string | undefined;
113
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
114
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
115
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
116
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
117
+ }, {
118
+ rendererTypeName: string;
119
+ error: unknown;
120
+ statusMessage: string | undefined;
121
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
122
+ onHorizontalScroll?: () => void;
123
+ blockState?: Record<string, any>;
124
+ }>;
125
+ readonly DisplayBlurb: React.FC<{
126
+ model: {
127
+ id: string;
128
+ type: string;
129
+ rpcDriverName: string | undefined;
130
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
131
+ rendererTypeName: string;
132
+ error: unknown;
133
+ statusMessage: string | undefined;
134
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
135
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
136
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
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+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
138
+ }, {
139
+ rendererTypeName: string;
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+ error: unknown;
141
+ statusMessage: string | undefined;
142
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
143
+ }> | null;
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+ readonly adapterConfig: any;
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+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
146
+ readonly parentDisplay: any;
147
+ readonly effectiveRpcDriverName: any;
148
+ } & {
149
+ renderProps(): any;
150
+ renderingProps(): {
151
+ displayModel: {
152
+ id: string;
153
+ type: string;
154
+ rpcDriverName: string | undefined;
155
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
156
+ rendererTypeName: string;
157
+ error: unknown;
158
+ statusMessage: string | undefined;
159
+ } & {
160
+ readonly RenderingComponent: React.FC<{
161
+ model: {
162
+ id: string;
163
+ type: string;
164
+ rpcDriverName: string | undefined;
165
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
166
+ rendererTypeName: string;
167
+ error: unknown;
168
+ statusMessage: string | undefined;
169
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
170
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
171
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
172
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
173
+ }, {
174
+ rendererTypeName: string;
175
+ error: unknown;
176
+ statusMessage: string | undefined;
177
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
178
+ onHorizontalScroll?: () => void;
179
+ blockState?: Record<string, any>;
180
+ }>;
181
+ readonly DisplayBlurb: React.FC<{
182
+ model: {
183
+ id: string;
184
+ type: string;
185
+ rpcDriverName: string | undefined;
186
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
187
+ rendererTypeName: string;
188
+ error: unknown;
189
+ statusMessage: string | undefined;
190
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
191
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
192
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
193
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
194
+ }, {
195
+ rendererTypeName: string;
196
+ error: unknown;
197
+ statusMessage: string | undefined;
198
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
199
+ }> | null;
200
+ readonly adapterConfig: any;
201
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
202
+ readonly parentDisplay: any;
203
+ readonly effectiveRpcDriverName: any;
204
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
205
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
206
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
207
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
208
+ }, {
209
+ rendererTypeName: string;
210
+ error: unknown;
211
+ statusMessage: string | undefined;
212
+ } & {
213
+ readonly RenderingComponent: React.FC<{
214
+ model: {
215
+ id: string;
216
+ type: string;
217
+ rpcDriverName: string | undefined;
218
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
219
+ rendererTypeName: string;
220
+ error: unknown;
221
+ statusMessage: string | undefined;
222
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
223
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
224
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
225
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
226
+ }, {
227
+ rendererTypeName: string;
228
+ error: unknown;
229
+ statusMessage: string | undefined;
230
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
231
+ onHorizontalScroll?: () => void;
232
+ blockState?: Record<string, any>;
233
+ }>;
234
+ readonly DisplayBlurb: React.FC<{
235
+ model: {
236
+ id: string;
237
+ type: string;
238
+ rpcDriverName: string | undefined;
239
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
240
+ rendererTypeName: string;
241
+ error: unknown;
242
+ statusMessage: string | undefined;
243
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
244
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
245
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
246
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
247
+ }, {
248
+ rendererTypeName: string;
249
+ error: unknown;
250
+ statusMessage: string | undefined;
251
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
252
+ }> | null;
253
+ readonly adapterConfig: any;
254
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
255
+ readonly parentDisplay: any;
256
+ readonly effectiveRpcDriverName: any;
257
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
258
+ };
259
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
260
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
261
+ trackMenuItems(): MenuItem[];
262
+ readonly viewMenuActions: MenuItem[];
263
+ regionCannotBeRendered(): null;
264
+ } & {
265
+ setStatusMessage(arg?: string): void;
266
+ setError(error?: unknown): void;
267
+ setRpcDriverName(rpcDriverName: string): void;
268
+ reload(): void;
269
+ } & {
270
+ scrollTop: number;
271
+ } & {
272
+ readonly height: number;
273
+ } & {
274
+ setScrollTop(scrollTop: number): void;
275
+ setHeight(displayHeight: number): number;
276
+ resizeHeight(distance: number): number;
277
+ } & {
278
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
279
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
280
+ currStatsBpPerPx: number;
281
+ } & {
282
+ readonly currentBytesRequested: number;
283
+ readonly currentFeatureScreenDensity: number;
284
+ readonly maxFeatureScreenDensity: any;
285
+ readonly featureDensityStatsReady: boolean;
286
+ readonly maxAllowableBytes: number;
287
+ } & {
288
+ afterAttach(): void;
289
+ } & {
290
+ setCurrStatsBpPerPx(n: number): void;
291
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
292
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
293
+ setFeatureDensityStatsP(arg: any): void;
294
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
295
+ clearFeatureDensityStats(): void;
296
+ } & {
297
+ readonly regionTooLarge: boolean;
298
+ readonly regionTooLargeReason: string;
299
+ } & {
300
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
301
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
302
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
303
+ } & {
304
+ mouseoverExtraInformation: string | undefined;
305
+ featureIdUnderMouse: undefined | string;
306
+ subfeatureIdUnderMouse: undefined | string;
307
+ contextMenuFeature: undefined | Feature;
308
+ } & {
309
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
310
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
311
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
312
+ } & {
313
+ readonly renderDelay: number;
314
+ readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
315
+ legendItems(_theme?: import("@mui/material").Theme): import("../index.ts").LegendItem[];
316
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
317
+ readonly selectedFeatureId: string | undefined;
318
+ readonly featureWidgetType: {
319
+ type: string;
320
+ id: string;
321
+ };
322
+ } & {
323
+ readonly showTooltipsEnabled: boolean;
324
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
325
+ readonly featureUnderMouse: Feature | undefined;
326
+ getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
327
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("../BaseLinearDisplay/types.ts").LayoutRecord>;
328
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
329
+ getFeatureByID(blockKey: string, id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
330
+ searchFeatureByID(id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
331
+ readonly floatingLabelData: Map<string, import("../BaseLinearDisplay/components/util.ts").FeatureLabelData>;
332
+ } & {
333
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
334
+ deleteBlock(key: string): void;
335
+ selectFeature(feature: Feature): void;
336
+ navToFeature(feature: Feature): void;
337
+ clearFeatureSelection(): void;
338
+ setFeatureIdUnderMouse(feature?: string): void;
339
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
340
+ setContextMenuFeature(feature?: Feature): void;
341
+ setMouseoverExtraInformation(extra?: string): void;
342
+ setShowLegend(s: boolean): void;
343
+ setShowTooltips(arg: boolean): void;
344
+ } & {
345
+ reload(): Promise<void>;
346
+ } & {
347
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
348
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
349
+ } & {
350
+ trackMenuItems(): MenuItem[];
351
+ contextMenuItems(): MenuItem[];
352
+ renderingProps(): {
353
+ displayModel: {
354
+ id: string;
355
+ type: string;
356
+ rpcDriverName: string | undefined;
357
+ heightPreConfig: number | undefined;
358
+ userBpPerPxLimit: number | undefined;
359
+ userByteSizeLimit: number | undefined;
360
+ blockState: import("@jbrowse/mobx-state-tree").IMSTMap<import("@jbrowse/mobx-state-tree").IModelType<{
361
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
362
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
363
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
364
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
365
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
366
+ }, {
367
+ stopToken: import("@jbrowse/core/util").StopToken | undefined;
368
+ filled: boolean;
369
+ reactElement: React.ReactElement | undefined;
370
+ features: Map<string, Feature> | undefined;
371
+ layout: any;
372
+ blockStatusMessage: string;
373
+ error: unknown;
374
+ message: string | undefined;
375
+ maxHeightReached: boolean;
376
+ ReactComponent: ({ model, }: {
377
+ model: {
378
+ error?: unknown;
379
+ reload: () => void;
380
+ message?: React.ReactNode;
381
+ statusMessage?: string;
382
+ reactElement?: React.ReactElement;
383
+ isRenderingPending?: boolean;
384
+ };
385
+ }) => import("react/jsx-runtime").JSX.Element;
386
+ renderProps: any;
387
+ renderArgs: Record<string, unknown> | undefined;
388
+ isRenderingPending: boolean;
389
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
390
+ } & {
391
+ doReload(): void;
392
+ setStatusMessage(message: string): void;
393
+ setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
394
+ setMessage(messageText: string): void;
395
+ setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
396
+ setError(error: unknown): void;
397
+ reload(): void;
398
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
399
+ beforeDestroy(): void;
400
+ } & {
401
+ readonly statusMessage: any;
402
+ } & {
403
+ afterAttach(): void;
404
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
405
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
406
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
407
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
408
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
409
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
410
+ }, {
411
+ stopToken: import("@jbrowse/core/util").StopToken | undefined;
412
+ filled: boolean;
413
+ reactElement: React.ReactElement | undefined;
414
+ features: Map<string, Feature> | undefined;
415
+ layout: any;
416
+ blockStatusMessage: string;
417
+ error: unknown;
418
+ message: string | undefined;
419
+ maxHeightReached: boolean;
420
+ ReactComponent: ({ model, }: {
421
+ model: {
422
+ error?: unknown;
423
+ reload: () => void;
424
+ message?: React.ReactNode;
425
+ statusMessage?: string;
426
+ reactElement?: React.ReactElement;
427
+ isRenderingPending?: boolean;
428
+ };
429
+ }) => import("react/jsx-runtime").JSX.Element;
430
+ renderProps: any;
431
+ renderArgs: Record<string, unknown> | undefined;
432
+ isRenderingPending: boolean;
433
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
434
+ } & {
435
+ doReload(): void;
436
+ setStatusMessage(message: string): void;
437
+ setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
438
+ setMessage(messageText: string): void;
439
+ setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
440
+ setError(error: unknown): void;
441
+ reload(): void;
442
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
443
+ beforeDestroy(): void;
444
+ } & {
445
+ readonly statusMessage: any;
446
+ } & {
447
+ afterAttach(): void;
448
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
449
+ configuration: {
450
+ [x: string]: any;
451
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
452
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
453
+ [x: string]: any;
454
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
455
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
456
+ [x: string]: any;
457
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
458
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
459
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
460
+ maxFeatureScreenDensity: {
461
+ type: string;
462
+ description: string;
463
+ defaultValue: number;
464
+ };
465
+ fetchSizeLimit: {
466
+ type: string;
467
+ defaultValue: number;
468
+ description: string;
469
+ };
470
+ height: {
471
+ type: string;
472
+ defaultValue: number;
473
+ description: string;
474
+ };
475
+ mouseover: {
476
+ type: string;
477
+ description: string;
478
+ defaultValue: string;
479
+ contextVariable: string[];
480
+ };
481
+ jexlFilters: {
482
+ type: string;
483
+ description: string;
484
+ defaultValue: never[];
485
+ };
486
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>>;
487
+ showLegend: boolean | undefined;
488
+ showTooltips: boolean | undefined;
489
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
490
+ rendererTypeName: string;
491
+ error: unknown;
492
+ statusMessage: string | undefined;
493
+ } & {
494
+ readonly RenderingComponent: React.FC<{
495
+ model: {
496
+ id: string;
497
+ type: string;
498
+ rpcDriverName: string | undefined;
499
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
500
+ rendererTypeName: string;
501
+ error: unknown;
502
+ statusMessage: string | undefined;
503
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
504
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
505
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
506
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
507
+ }, {
508
+ rendererTypeName: string;
509
+ error: unknown;
510
+ statusMessage: string | undefined;
511
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
512
+ onHorizontalScroll?: () => void;
513
+ blockState?: Record<string, any>;
514
+ }>;
515
+ readonly DisplayBlurb: React.FC<{
516
+ model: {
517
+ id: string;
518
+ type: string;
519
+ rpcDriverName: string | undefined;
520
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
521
+ rendererTypeName: string;
522
+ error: unknown;
523
+ statusMessage: string | undefined;
524
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
525
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
526
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
527
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
528
+ }, {
529
+ rendererTypeName: string;
530
+ error: unknown;
531
+ statusMessage: string | undefined;
532
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
533
+ }> | null;
534
+ readonly adapterConfig: any;
535
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
536
+ readonly parentDisplay: any;
537
+ readonly effectiveRpcDriverName: any;
538
+ } & {
539
+ renderProps(): any;
540
+ renderingProps(): {
541
+ displayModel: {
542
+ id: string;
543
+ type: string;
544
+ rpcDriverName: string | undefined;
545
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
546
+ rendererTypeName: string;
547
+ error: unknown;
548
+ statusMessage: string | undefined;
549
+ } & {
550
+ readonly RenderingComponent: React.FC<{
551
+ model: {
552
+ id: string;
553
+ type: string;
554
+ rpcDriverName: string | undefined;
555
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
556
+ rendererTypeName: string;
557
+ error: unknown;
558
+ statusMessage: string | undefined;
559
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
560
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
561
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
562
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
563
+ }, {
564
+ rendererTypeName: string;
565
+ error: unknown;
566
+ statusMessage: string | undefined;
567
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
568
+ onHorizontalScroll?: () => void;
569
+ blockState?: Record<string, any>;
570
+ }>;
571
+ readonly DisplayBlurb: React.FC<{
572
+ model: {
573
+ id: string;
574
+ type: string;
575
+ rpcDriverName: string | undefined;
576
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
577
+ rendererTypeName: string;
578
+ error: unknown;
579
+ statusMessage: string | undefined;
580
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
581
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
582
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
583
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
584
+ }, {
585
+ rendererTypeName: string;
586
+ error: unknown;
587
+ statusMessage: string | undefined;
588
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
589
+ }> | null;
590
+ readonly adapterConfig: any;
591
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
592
+ readonly parentDisplay: any;
593
+ readonly effectiveRpcDriverName: any;
594
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
595
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
596
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
597
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
598
+ }, {
599
+ rendererTypeName: string;
600
+ error: unknown;
601
+ statusMessage: string | undefined;
602
+ } & {
603
+ readonly RenderingComponent: React.FC<{
604
+ model: {
605
+ id: string;
606
+ type: string;
607
+ rpcDriverName: string | undefined;
608
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
609
+ rendererTypeName: string;
610
+ error: unknown;
611
+ statusMessage: string | undefined;
612
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
613
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
614
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
615
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
616
+ }, {
617
+ rendererTypeName: string;
618
+ error: unknown;
619
+ statusMessage: string | undefined;
620
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
621
+ onHorizontalScroll?: () => void;
622
+ blockState?: Record<string, any>;
623
+ }>;
624
+ readonly DisplayBlurb: React.FC<{
625
+ model: {
626
+ id: string;
627
+ type: string;
628
+ rpcDriverName: string | undefined;
629
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
630
+ rendererTypeName: string;
631
+ error: unknown;
632
+ statusMessage: string | undefined;
633
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
634
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
635
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
636
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
637
+ }, {
638
+ rendererTypeName: string;
639
+ error: unknown;
640
+ statusMessage: string | undefined;
641
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
642
+ }> | null;
643
+ readonly adapterConfig: any;
644
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
645
+ readonly parentDisplay: any;
646
+ readonly effectiveRpcDriverName: any;
647
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
648
+ };
649
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
650
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
651
+ trackMenuItems(): MenuItem[];
652
+ readonly viewMenuActions: MenuItem[];
653
+ regionCannotBeRendered(): null;
654
+ } & {
655
+ setStatusMessage(arg?: string): void;
656
+ setError(error?: unknown): void;
657
+ setRpcDriverName(rpcDriverName: string): void;
658
+ reload(): void;
659
+ } & {
660
+ scrollTop: number;
661
+ } & {
662
+ readonly height: number;
663
+ } & {
664
+ setScrollTop(scrollTop: number): void;
665
+ setHeight(displayHeight: number): number;
666
+ resizeHeight(distance: number): number;
667
+ } & {
668
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
669
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
670
+ currStatsBpPerPx: number;
671
+ } & {
672
+ readonly currentBytesRequested: number;
673
+ readonly currentFeatureScreenDensity: number;
674
+ readonly maxFeatureScreenDensity: any;
675
+ readonly featureDensityStatsReady: boolean;
676
+ readonly maxAllowableBytes: number;
677
+ } & {
678
+ afterAttach(): void;
679
+ } & {
680
+ setCurrStatsBpPerPx(n: number): void;
681
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
682
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
683
+ setFeatureDensityStatsP(arg: any): void;
684
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
685
+ clearFeatureDensityStats(): void;
686
+ } & {
687
+ readonly regionTooLarge: boolean;
688
+ readonly regionTooLargeReason: string;
689
+ } & {
690
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
691
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
692
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
693
+ } & {
694
+ mouseoverExtraInformation: string | undefined;
695
+ featureIdUnderMouse: undefined | string;
696
+ subfeatureIdUnderMouse: undefined | string;
697
+ contextMenuFeature: undefined | Feature;
698
+ } & {
699
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
700
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
701
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
702
+ } & {
703
+ readonly renderDelay: number;
704
+ readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
705
+ legendItems(_theme?: import("@mui/material").Theme): import("../index.ts").LegendItem[];
706
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
707
+ readonly selectedFeatureId: string | undefined;
708
+ readonly featureWidgetType: {
709
+ type: string;
710
+ id: string;
711
+ };
712
+ } & {
713
+ readonly showTooltipsEnabled: boolean;
714
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
715
+ readonly featureUnderMouse: Feature | undefined;
716
+ getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
717
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("../BaseLinearDisplay/types.ts").LayoutRecord>;
718
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
719
+ getFeatureByID(blockKey: string, id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
720
+ searchFeatureByID(id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
721
+ readonly floatingLabelData: Map<string, import("../BaseLinearDisplay/components/util.ts").FeatureLabelData>;
722
+ } & {
723
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
724
+ deleteBlock(key: string): void;
725
+ selectFeature(feature: Feature): void;
726
+ navToFeature(feature: Feature): void;
727
+ clearFeatureSelection(): void;
728
+ setFeatureIdUnderMouse(feature?: string): void;
729
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
730
+ setContextMenuFeature(feature?: Feature): void;
731
+ setMouseoverExtraInformation(extra?: string): void;
732
+ setShowLegend(s: boolean): void;
733
+ setShowTooltips(arg: boolean): void;
734
+ } & {
735
+ reload(): Promise<void>;
736
+ } & {
737
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
738
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
739
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
740
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
741
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
742
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
743
+ } & {
744
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
745
+ } & {
746
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
747
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
748
+ } & {
749
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
750
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
751
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
752
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
753
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
754
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
755
+ }, {
756
+ stopToken: import("@jbrowse/core/util").StopToken | undefined;
757
+ filled: boolean;
758
+ reactElement: React.ReactElement | undefined;
759
+ features: Map<string, Feature> | undefined;
760
+ layout: any;
761
+ blockStatusMessage: string;
762
+ error: unknown;
763
+ message: string | undefined;
764
+ maxHeightReached: boolean;
765
+ ReactComponent: ({ model, }: {
766
+ model: {
767
+ error?: unknown;
768
+ reload: () => void;
769
+ message?: React.ReactNode;
770
+ statusMessage?: string;
771
+ reactElement?: React.ReactElement;
772
+ isRenderingPending?: boolean;
773
+ };
774
+ }) => import("react/jsx-runtime").JSX.Element;
775
+ renderProps: any;
776
+ renderArgs: Record<string, unknown> | undefined;
777
+ isRenderingPending: boolean;
778
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
779
+ } & {
780
+ doReload(): void;
781
+ setStatusMessage(message: string): void;
782
+ setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
783
+ setMessage(messageText: string): void;
784
+ setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
785
+ setError(error: unknown): void;
786
+ reload(): void;
787
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
788
+ beforeDestroy(): void;
789
+ } & {
790
+ readonly statusMessage: any;
791
+ } & {
792
+ afterAttach(): void;
793
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
794
+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
795
+ maxFeatureScreenDensity: {
796
+ type: string;
797
+ description: string;
798
+ defaultValue: number;
799
+ };
800
+ fetchSizeLimit: {
801
+ type: string;
802
+ defaultValue: number;
803
+ description: string;
804
+ };
805
+ height: {
806
+ type: string;
807
+ defaultValue: number;
808
+ description: string;
809
+ };
810
+ mouseover: {
811
+ type: string;
812
+ description: string;
813
+ defaultValue: string;
814
+ contextVariable: string[];
815
+ };
816
+ jexlFilters: {
817
+ type: string;
818
+ description: string;
819
+ defaultValue: never[];
820
+ };
821
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
822
+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
823
+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
824
+ }, {
825
+ rendererTypeName: string;
826
+ error: unknown;
827
+ statusMessage: string | undefined;
828
+ } & {
829
+ readonly RenderingComponent: React.FC<{
830
+ model: {
831
+ id: string;
832
+ type: string;
833
+ rpcDriverName: string | undefined;
834
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
835
+ rendererTypeName: string;
836
+ error: unknown;
837
+ statusMessage: string | undefined;
838
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
839
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
840
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
841
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
842
+ }, {
843
+ rendererTypeName: string;
844
+ error: unknown;
845
+ statusMessage: string | undefined;
846
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
847
+ onHorizontalScroll?: () => void;
848
+ blockState?: Record<string, any>;
849
+ }>;
850
+ readonly DisplayBlurb: React.FC<{
851
+ model: {
852
+ id: string;
853
+ type: string;
854
+ rpcDriverName: string | undefined;
855
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
856
+ rendererTypeName: string;
857
+ error: unknown;
858
+ statusMessage: string | undefined;
859
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
860
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
861
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
862
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
863
+ }, {
864
+ rendererTypeName: string;
865
+ error: unknown;
866
+ statusMessage: string | undefined;
867
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
868
+ }> | null;
869
+ readonly adapterConfig: any;
870
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
871
+ readonly parentDisplay: any;
872
+ readonly effectiveRpcDriverName: any;
873
+ } & {
874
+ renderProps(): any;
875
+ renderingProps(): {
876
+ displayModel: {
877
+ id: string;
878
+ type: string;
879
+ rpcDriverName: string | undefined;
880
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
881
+ rendererTypeName: string;
882
+ error: unknown;
883
+ statusMessage: string | undefined;
884
+ } & {
885
+ readonly RenderingComponent: React.FC<{
886
+ model: {
887
+ id: string;
888
+ type: string;
889
+ rpcDriverName: string | undefined;
890
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
891
+ rendererTypeName: string;
892
+ error: unknown;
893
+ statusMessage: string | undefined;
894
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
895
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
896
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
897
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
898
+ }, {
899
+ rendererTypeName: string;
900
+ error: unknown;
901
+ statusMessage: string | undefined;
902
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
903
+ onHorizontalScroll?: () => void;
904
+ blockState?: Record<string, any>;
905
+ }>;
906
+ readonly DisplayBlurb: React.FC<{
907
+ model: {
908
+ id: string;
909
+ type: string;
910
+ rpcDriverName: string | undefined;
911
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
912
+ rendererTypeName: string;
913
+ error: unknown;
914
+ statusMessage: string | undefined;
915
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
916
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
917
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
918
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
919
+ }, {
920
+ rendererTypeName: string;
921
+ error: unknown;
922
+ statusMessage: string | undefined;
923
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
924
+ }> | null;
925
+ readonly adapterConfig: any;
926
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
927
+ readonly parentDisplay: any;
928
+ readonly effectiveRpcDriverName: any;
929
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
930
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
931
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
932
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
933
+ }, {
934
+ rendererTypeName: string;
935
+ error: unknown;
936
+ statusMessage: string | undefined;
937
+ } & {
938
+ readonly RenderingComponent: React.FC<{
939
+ model: {
940
+ id: string;
941
+ type: string;
942
+ rpcDriverName: string | undefined;
943
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
944
+ rendererTypeName: string;
945
+ error: unknown;
946
+ statusMessage: string | undefined;
947
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
948
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
949
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
950
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
951
+ }, {
952
+ rendererTypeName: string;
953
+ error: unknown;
954
+ statusMessage: string | undefined;
955
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
956
+ onHorizontalScroll?: () => void;
957
+ blockState?: Record<string, any>;
958
+ }>;
959
+ readonly DisplayBlurb: React.FC<{
960
+ model: {
961
+ id: string;
962
+ type: string;
963
+ rpcDriverName: string | undefined;
964
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
965
+ rendererTypeName: string;
966
+ error: unknown;
967
+ statusMessage: string | undefined;
968
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
969
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
970
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
971
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
972
+ }, {
973
+ rendererTypeName: string;
974
+ error: unknown;
975
+ statusMessage: string | undefined;
976
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
977
+ }> | null;
978
+ readonly adapterConfig: any;
979
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
980
+ readonly parentDisplay: any;
981
+ readonly effectiveRpcDriverName: any;
982
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
983
+ };
984
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
985
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
986
+ trackMenuItems(): MenuItem[];
987
+ readonly viewMenuActions: MenuItem[];
988
+ regionCannotBeRendered(): null;
989
+ } & {
990
+ setStatusMessage(arg?: string): void;
991
+ setError(error?: unknown): void;
992
+ setRpcDriverName(rpcDriverName: string): void;
993
+ reload(): void;
994
+ } & {
995
+ scrollTop: number;
996
+ } & {
997
+ readonly height: number;
998
+ } & {
999
+ setScrollTop(scrollTop: number): void;
1000
+ setHeight(displayHeight: number): number;
1001
+ resizeHeight(distance: number): number;
1002
+ } & {
1003
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
1004
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
1005
+ currStatsBpPerPx: number;
1006
+ } & {
1007
+ readonly currentBytesRequested: number;
1008
+ readonly currentFeatureScreenDensity: number;
1009
+ readonly maxFeatureScreenDensity: any;
1010
+ readonly featureDensityStatsReady: boolean;
1011
+ readonly maxAllowableBytes: number;
1012
+ } & {
1013
+ afterAttach(): void;
1014
+ } & {
1015
+ setCurrStatsBpPerPx(n: number): void;
1016
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
1017
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
1018
+ setFeatureDensityStatsP(arg: any): void;
1019
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
1020
+ clearFeatureDensityStats(): void;
1021
+ } & {
1022
+ readonly regionTooLarge: boolean;
1023
+ readonly regionTooLargeReason: string;
1024
+ } & {
1025
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
1026
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
1027
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
1028
+ } & {
1029
+ mouseoverExtraInformation: string | undefined;
1030
+ featureIdUnderMouse: undefined | string;
1031
+ subfeatureIdUnderMouse: undefined | string;
1032
+ contextMenuFeature: undefined | Feature;
1033
+ } & {
1034
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
1035
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
1036
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
1037
+ } & {
1038
+ readonly renderDelay: number;
1039
+ readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
1040
+ legendItems(_theme?: import("@mui/material").Theme): import("../index.ts").LegendItem[];
1041
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
1042
+ readonly selectedFeatureId: string | undefined;
1043
+ readonly featureWidgetType: {
1044
+ type: string;
1045
+ id: string;
1046
+ };
1047
+ } & {
1048
+ readonly showTooltipsEnabled: boolean;
1049
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
1050
+ readonly featureUnderMouse: Feature | undefined;
1051
+ getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
1052
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("../BaseLinearDisplay/types.ts").LayoutRecord>;
1053
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
1054
+ getFeatureByID(blockKey: string, id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
1055
+ searchFeatureByID(id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
1056
+ readonly floatingLabelData: Map<string, import("../BaseLinearDisplay/components/util.ts").FeatureLabelData>;
1057
+ } & {
1058
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
1059
+ deleteBlock(key: string): void;
1060
+ selectFeature(feature: Feature): void;
1061
+ navToFeature(feature: Feature): void;
1062
+ clearFeatureSelection(): void;
1063
+ setFeatureIdUnderMouse(feature?: string): void;
1064
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
1065
+ setContextMenuFeature(feature?: Feature): void;
1066
+ setMouseoverExtraInformation(extra?: string): void;
1067
+ setShowLegend(s: boolean): void;
1068
+ setShowTooltips(arg: boolean): void;
1069
+ } & {
1070
+ reload(): Promise<void>;
1071
+ } & {
1072
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
1073
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
1074
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1075
+ onMouseMove(_: unknown, featureId?: string): void;
1076
+ onMouseLeave(_: unknown): void;
1077
+ onContextMenu(_: unknown): void;
1078
+ };
1079
+ renderProps(): any;
1080
+ } & {
1081
+ renderSvg(opts: import("../index.ts").ExportSvgDisplayOptions): Promise<import("react/jsx-runtime").JSX.Element>;
1082
+ afterAttach(): void;
1083
+ } & {
1084
+ featureUnderMouseVolatile: Feature | undefined;
1085
+ } & {
1086
+ readonly activeFilters: any;
1087
+ readonly rendererTypeName: any;
1088
+ readonly sequenceAdapter: any;
1089
+ readonly showLabels: any;
1090
+ readonly showDescriptions: any;
1091
+ readonly maxHeight: any;
1092
+ readonly displayMode: any;
1093
+ } & {
1094
+ readonly rendererConfig: {
1095
+ showLabels: any;
1096
+ showDescriptions: any;
1097
+ displayMode: any;
1098
+ maxHeight: any;
1099
+ };
1100
+ } & {
1101
+ setJexlFilters(f?: string[]): void;
1102
+ setFeatureUnderMouse(feat?: Feature): void;
1103
+ toggleShowLabels(): void;
1104
+ toggleShowDescriptions(): void;
1105
+ setDisplayMode(val: string): void;
1106
+ setMaxHeight(val?: number): void;
1107
+ } & {
1108
+ readonly featureUnderMouse: Feature | undefined;
1109
+ } & {
1110
+ renderProps(): {
1111
+ config: {
1112
+ showLabels: any;
1113
+ showDescriptions: any;
1114
+ displayMode: any;
1115
+ maxHeight: any;
1116
+ };
1117
+ filters: SerializableFilterChain;
1118
+ sequenceAdapter: any;
1119
+ };
1120
+ renderingProps(): {
1121
+ onFeatureClick(_: unknown, featureId?: string): Promise<void>;
1122
+ onFeatureContextMenu(_: unknown, featureId?: string): Promise<void>;
1123
+ displayModel: {
1124
+ id: string;
1125
+ type: string;
1126
+ rpcDriverName: string | undefined;
1127
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1128
+ rendererTypeName: string;
1129
+ error: unknown;
1130
+ statusMessage: string | undefined;
1131
+ } & {
1132
+ readonly RenderingComponent: React.FC<{
1133
+ model: {
1134
+ id: string;
1135
+ type: string;
1136
+ rpcDriverName: string | undefined;
1137
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1138
+ rendererTypeName: string;
1139
+ error: unknown;
1140
+ statusMessage: string | undefined;
1141
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1142
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1143
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1144
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1145
+ }, {
1146
+ rendererTypeName: string;
1147
+ error: unknown;
1148
+ statusMessage: string | undefined;
1149
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1150
+ onHorizontalScroll?: () => void;
1151
+ blockState?: Record<string, any>;
1152
+ }>;
1153
+ readonly DisplayBlurb: React.FC<{
1154
+ model: {
1155
+ id: string;
1156
+ type: string;
1157
+ rpcDriverName: string | undefined;
1158
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1159
+ rendererTypeName: string;
1160
+ error: unknown;
1161
+ statusMessage: string | undefined;
1162
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1163
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1164
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1165
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1166
+ }, {
1167
+ rendererTypeName: string;
1168
+ error: unknown;
1169
+ statusMessage: string | undefined;
1170
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1171
+ }> | null;
1172
+ readonly adapterConfig: any;
1173
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1174
+ readonly parentDisplay: any;
1175
+ readonly effectiveRpcDriverName: any;
1176
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1177
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1178
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1179
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1180
+ }, {
1181
+ rendererTypeName: string;
1182
+ error: unknown;
1183
+ statusMessage: string | undefined;
1184
+ } & {
1185
+ readonly RenderingComponent: React.FC<{
1186
+ model: {
1187
+ id: string;
1188
+ type: string;
1189
+ rpcDriverName: string | undefined;
1190
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1191
+ rendererTypeName: string;
1192
+ error: unknown;
1193
+ statusMessage: string | undefined;
1194
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1195
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1196
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1197
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1198
+ }, {
1199
+ rendererTypeName: string;
1200
+ error: unknown;
1201
+ statusMessage: string | undefined;
1202
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1203
+ onHorizontalScroll?: () => void;
1204
+ blockState?: Record<string, any>;
1205
+ }>;
1206
+ readonly DisplayBlurb: React.FC<{
1207
+ model: {
1208
+ id: string;
1209
+ type: string;
1210
+ rpcDriverName: string | undefined;
1211
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1212
+ rendererTypeName: string;
1213
+ error: unknown;
1214
+ statusMessage: string | undefined;
1215
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1216
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1217
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1218
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1219
+ }, {
1220
+ rendererTypeName: string;
1221
+ error: unknown;
1222
+ statusMessage: string | undefined;
1223
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1224
+ }> | null;
1225
+ readonly adapterConfig: any;
1226
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1227
+ readonly parentDisplay: any;
1228
+ readonly effectiveRpcDriverName: any;
1229
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1230
+ };
1231
+ trackMenuItems(): MenuItem[];
1232
+ }, {
1233
+ type: string;
1234
+ } & Partial<import("@jbrowse/mobx-state-tree/dist/internal").ExtractCFromProps<{
1235
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1236
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1237
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1238
+ } & {
1239
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1240
+ } & {
1241
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1242
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1243
+ } & {
1244
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
1245
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1246
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
1247
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
1248
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1249
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1250
+ }, {
1251
+ stopToken: import("@jbrowse/core/util").StopToken | undefined;
1252
+ filled: boolean;
1253
+ reactElement: React.ReactElement | undefined;
1254
+ features: Map<string, Feature> | undefined;
1255
+ layout: any;
1256
+ blockStatusMessage: string;
1257
+ error: unknown;
1258
+ message: string | undefined;
1259
+ maxHeightReached: boolean;
1260
+ ReactComponent: ({ model, }: {
1261
+ model: {
1262
+ error?: unknown;
1263
+ reload: () => void;
1264
+ message?: React.ReactNode;
1265
+ statusMessage?: string;
1266
+ reactElement?: React.ReactElement;
1267
+ isRenderingPending?: boolean;
1268
+ };
1269
+ }) => import("react/jsx-runtime").JSX.Element;
1270
+ renderProps: any;
1271
+ renderArgs: Record<string, unknown> | undefined;
1272
+ isRenderingPending: boolean;
1273
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
1274
+ } & {
1275
+ doReload(): void;
1276
+ setStatusMessage(message: string): void;
1277
+ setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
1278
+ setMessage(messageText: string): void;
1279
+ setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
1280
+ setError(error: unknown): void;
1281
+ reload(): void;
1282
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
1283
+ beforeDestroy(): void;
1284
+ } & {
1285
+ readonly statusMessage: any;
1286
+ } & {
1287
+ afterAttach(): void;
1288
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1289
+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
1290
+ maxFeatureScreenDensity: {
1291
+ type: string;
1292
+ description: string;
1293
+ defaultValue: number;
1294
+ };
1295
+ fetchSizeLimit: {
1296
+ type: string;
1297
+ defaultValue: number;
1298
+ description: string;
1299
+ };
1300
+ height: {
1301
+ type: string;
1302
+ defaultValue: number;
1303
+ description: string;
1304
+ };
1305
+ mouseover: {
1306
+ type: string;
1307
+ description: string;
1308
+ defaultValue: string;
1309
+ contextVariable: string[];
1310
+ };
1311
+ jexlFilters: {
1312
+ type: string;
1313
+ description: string;
1314
+ defaultValue: never[];
1315
+ };
1316
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
1317
+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1318
+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1319
+ }>> & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1320
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1321
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1322
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1323
+ } & {
1324
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1325
+ } & {
1326
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1327
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1328
+ } & {
1329
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
1330
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1331
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
1332
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
1333
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1334
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1335
+ }, {
1336
+ stopToken: import("@jbrowse/core/util").StopToken | undefined;
1337
+ filled: boolean;
1338
+ reactElement: React.ReactElement | undefined;
1339
+ features: Map<string, Feature> | undefined;
1340
+ layout: any;
1341
+ blockStatusMessage: string;
1342
+ error: unknown;
1343
+ message: string | undefined;
1344
+ maxHeightReached: boolean;
1345
+ ReactComponent: ({ model, }: {
1346
+ model: {
1347
+ error?: unknown;
1348
+ reload: () => void;
1349
+ message?: React.ReactNode;
1350
+ statusMessage?: string;
1351
+ reactElement?: React.ReactElement;
1352
+ isRenderingPending?: boolean;
1353
+ };
1354
+ }) => import("react/jsx-runtime").JSX.Element;
1355
+ renderProps: any;
1356
+ renderArgs: Record<string, unknown> | undefined;
1357
+ isRenderingPending: boolean;
1358
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
1359
+ } & {
1360
+ doReload(): void;
1361
+ setStatusMessage(message: string): void;
1362
+ setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
1363
+ setMessage(messageText: string): void;
1364
+ setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
1365
+ setError(error: unknown): void;
1366
+ reload(): void;
1367
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
1368
+ beforeDestroy(): void;
1369
+ } & {
1370
+ readonly statusMessage: any;
1371
+ } & {
1372
+ afterAttach(): void;
1373
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1374
+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
1375
+ maxFeatureScreenDensity: {
1376
+ type: string;
1377
+ description: string;
1378
+ defaultValue: number;
1379
+ };
1380
+ fetchSizeLimit: {
1381
+ type: string;
1382
+ defaultValue: number;
1383
+ description: string;
1384
+ };
1385
+ height: {
1386
+ type: string;
1387
+ defaultValue: number;
1388
+ description: string;
1389
+ };
1390
+ mouseover: {
1391
+ type: string;
1392
+ description: string;
1393
+ defaultValue: string;
1394
+ contextVariable: string[];
1395
+ };
1396
+ jexlFilters: {
1397
+ type: string;
1398
+ description: string;
1399
+ defaultValue: never[];
1400
+ };
1401
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
1402
+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1403
+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1404
+ } & {
1405
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<"LinearFeatureDisplay">;
1406
+ trackShowLabels: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1407
+ trackShowDescriptions: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1408
+ trackDisplayMode: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1409
+ trackMaxHeight: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1410
+ configuration: AnyConfigurationSchemaType;
1411
+ jexlFilters: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/mobx-state-tree").ISimpleType<string>>>;
1412
+ }>>;
1413
+ export type LinearFeatureDisplayStateModel = ReturnType<typeof stateModelFactory>;
1414
+ export type LinearFeatureDisplayModel = Instance<LinearFeatureDisplayStateModel>;
1415
+ export default stateModelFactory;