@jbrowse/plugin-linear-genome-view 1.7.0 → 1.7.4

package/dist/LinearGenomeView/index.d.ts

@@ -1,292 +1,292 @@
-import { Region } from '@jbrowse/core/util/types';
-import { MenuItem } from '@jbrowse/core/ui';
-import BaseResult from '@jbrowse/core/TextSearch/BaseResults';
-import { BlockSet, BaseBlock } from '@jbrowse/core/util/blockTypes';
-import { Instance } from 'mobx-state-tree';
-import PluginManager from '@jbrowse/core/PluginManager';
-import { renderToSvg } from './components/LinearGenomeViewSvg';
-import RefNameAutocomplete from './components/RefNameAutocomplete';
-import SearchBox from './components/SearchBox';
-export interface BpOffset {
-    refName?: string;
-    index: number;
-    offset: number;
-    start?: number;
-    end?: number;
-    coord?: number;
-    reversed?: boolean;
-    assemblyName?: string;
-    oob?: boolean;
-}
-export interface ExportSvgOptions {
-    rasterizeLayers?: boolean;
-}
-export interface NavLocation {
-    refName: string;
-    start?: number;
-    end?: number;
-    assemblyName?: string;
-}
-export declare const HEADER_BAR_HEIGHT = 48;
-export declare const HEADER_OVERVIEW_HEIGHT = 20;
-export declare const SCALE_BAR_HEIGHT = 17;
-export declare const RESIZE_HANDLE_HEIGHT = 3;
-export declare const INTER_REGION_PADDING_WIDTH = 2;
-export declare const WIDGET_HEIGHT = 32;
-export declare const SPACING = 7;
-export declare function stateModelFactory(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
-    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-    displayName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-} & {
-    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-    type: import("mobx-state-tree").ISimpleType<"LinearGenomeView">;
-    offsetPx: import("mobx-state-tree").IType<number | undefined, number, number>;
-    bpPerPx: import("mobx-state-tree").IType<number | undefined, number, number>;
-    displayedRegions: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-        refName: import("mobx-state-tree").ISimpleType<string>;
-        start: import("mobx-state-tree").ISimpleType<number>;
-        end: import("mobx-state-tree").ISimpleType<number>;
-        reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
-    } & {
-        assemblyName: import("mobx-state-tree").ISimpleType<string>;
-    }, {
-        setRefName(newRefName: string): void;
-    }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
-    hideHeader: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
-    hideHeaderOverview: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
-    trackSelectorType: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<"hierarchical">, [undefined]>;
-    trackLabels: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-    showCenterLine: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
-    showCytobandsSetting: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
-}, {
-    width: number;
-} & {
-    menuItems(): MenuItem[];
-} & {
-    setDisplayName(name: string): void;
-    setWidth(newWidth: number): void;
-} & {
-    volatileWidth: number | undefined;
-    minimumBlockWidth: number;
-    draggingTrackId: string | undefined;
-    volatileError: Error | undefined;
-    afterDisplayedRegionsSetCallbacks: Function[];
-    scaleFactor: number;
-    trackRefs: {
-        [key: string]: any;
-    };
-    coarseDynamicBlocks: BaseBlock[];
-    coarseTotalBp: number;
-    leftOffset: BpOffset | undefined;
-    rightOffset: BpOffset | undefined;
-    searchResults: BaseResult[] | undefined;
-    searchQuery: string | undefined;
-    seqDialogDisplayed: boolean;
-} & {
-    readonly width: number;
-    readonly interRegionPaddingWidth: number;
-} & {
-    readonly assemblyErrors: string;
-    readonly assembliesInitialized: boolean;
-    readonly initialized: boolean;
-    readonly hasDisplayedRegions: boolean;
-    readonly isSearchDialogDisplayed: boolean;
-    readonly scaleBarHeight: number;
-    readonly headerHeight: number;
-    readonly trackHeights: any;
-    readonly trackHeightsWithResizeHandles: any;
-    readonly height: any;
-    readonly totalBp: number;
-    readonly maxBpPerPx: number;
-    readonly minBpPerPx: number;
-    readonly error: string | Error;
-    readonly maxOffset: number;
-    readonly minOffset: number;
-    readonly displayedRegionsTotalPx: number;
-    renderProps(): any;
-    readonly assemblyNames: string[];
-    searchScope(assemblyName: string): {
-        assemblyName: string;
-        includeAggregateIndexes: boolean;
-        tracks: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IAnyType> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>>;
-    };
-    /**
-     * @param refName - refName of the displayedRegion
-     * @param coord - coordinate at the displayed Region
-     * @param regionNumber - optional param used as identifier when
-     * there are multiple displayedRegions with the same refName
-     * @returns offsetPx of the displayed region that it lands in
-     */
-    bpToPx({ refName, coord, regionNumber, }: {
-        refName: string;
-        coord: number;
-        regionNumber?: number | undefined;
-    }): {
-        index: number;
-        offsetPx: number;
-    } | undefined;
-    /**
-     *
-     * @param px - px in the view area, return value is the displayed regions
-     * @returns BpOffset of the displayed region that it lands in
-     */
-    pxToBp(px: number): {
-        oob: boolean;
-        coord: number;
-        offset: number;
-        index: number;
-        refName: string;
-        start: number;
-        end: number;
-        reversed: boolean;
-        assemblyName: string;
-    };
-    getTrack(id: string): any;
-    rankSearchResults(results: BaseResult[]): BaseResult[];
-    rewriteOnClicks(trackType: string, viewMenuActions: MenuItem[]): void;
-    readonly trackTypeActions: Map<string, MenuItem[]>;
-    readonly centerLineInfo: {
-        oob: boolean;
-        coord: number;
-        offset: number;
-        index: number;
-        refName: string;
-        start: number;
-        end: number;
-        reversed: boolean;
-        assemblyName: string;
-    } | undefined;
-} & {
-    setShowCytobands(flag: boolean): void;
-    setWidth(newWidth: number): void;
-    setError(error: Error | undefined): void;
-    toggleHeader(): void;
-    toggleHeaderOverview(): void;
-    scrollTo(offsetPx: number): number;
-    zoomTo(bpPerPx: number): number;
-    setOffsets(left: undefined | BpOffset, right: undefined | BpOffset): void;
-    setSearchResults(results: BaseResult[] | undefined, query: string | undefined): void;
-    setSequenceDialogOpen(open: boolean): void;
-    setNewView(bpPerPx: number, offsetPx: number): void;
-    horizontallyFlip(): void;
-    showTrack(trackId: string, initialSnapshot?: {}, displayInitialSnapshot?: {}): any;
-    hideTrack(trackId: string): number;
-} & {
-    moveTrack(movingTrackId: string, targetTrackId: string): void;
-    closeView(): void;
-    toggleTrack(trackId: string): void;
-    setTrackLabels(setting: 'overlapping' | 'offset' | 'hidden'): void;
-    toggleCenterLine(): void;
-    setDisplayedRegions(regions: Region[]): void;
-    activateTrackSelector(): import("@jbrowse/core/util").Widget;
-    navToLocString(locString: string, optAssemblyName?: string | undefined): void;
-    /**
-     * Navigate to a location based on its refName and optionally start, end,
-     * and assemblyName. Can handle if there are multiple displayedRegions
-     * from same refName. Only navigates to a location if it is entirely
-     * within a displayedRegion. Navigates to the first matching location
-     * encountered.
-     *
-     * Throws an error if navigation was unsuccessful
-     *
-     * @param location - a proposed location to navigate to
-     */
-    navTo(query: NavLocation): void;
-    navToMultiple(locations: NavLocation[]): void;
-    /**
-     * Navigate to a location based on user clicking and dragging on the
-     * overview scale bar to select a region to zoom into.
-     * Can handle if there are multiple displayedRegions from same refName.
-     * Only navigates to a location if it is entirely within a displayedRegion.
-     *
-     * @param leftPx- `object as {start, end, index, offset}`, offset = start of user drag
-     * @param rightPx- `object as {start, end, index, offset}`, offset = end of user drag
-     */
-    zoomToDisplayedRegions(leftPx: BpOffset, rightPx: BpOffset): void;
-    /**
-     * Helper method for the fetchSequence.
-     * Retrieves the corresponding regions that were selected by the rubberband
-     *
-     * @param leftOffset - `object as {start, end, index, offset}`, offset = start of user drag
-     * @param rightOffset - `object as {start, end, index, offset}`, offset = end of user drag
-     * @returns array of Region[]
-     */
-    getSelectedRegions(leftOffset: BpOffset | undefined, rightOffset: BpOffset | undefined): {
-        start: number;
-        end: number;
-        regionNumber?: number | undefined;
-        reversed?: boolean | undefined;
-        refName: string;
-        assemblyName: string;
-        key: string;
-        offsetPx: number;
-        widthPx: number;
-        variant?: string | undefined;
-        isLeftEndOfDisplayedRegion?: boolean | undefined;
-    }[];
-    afterDisplayedRegionsSet(cb: Function): void;
-    /**
-     * offset is the base-pair-offset in the displayed region, index is the index of the
-     * displayed region in the linear genome view
-     *
-     * @param start - object as `{start, end, offset, index}`
-     * @param end - object as `{start, end, offset, index}`
-     */
-    moveTo(start: BpOffset, end: BpOffset): void;
-    horizontalScroll(distance: number): number;
-    /**
-     * scrolls the view to center on the given bp. if that is not in any
-     * of the displayed regions, does nothing
-     * @param bp - basepair at which you want to center the view
-     * @param refName - refName of the displayedRegion you are centering at
-     * @param regionIndex - index of the displayedRegion
-     */
-    centerAt(bp: number, refName: string, regionIndex: number): void;
-    center(): void;
-    showAllRegions(): void;
-    showAllRegionsInAssembly(assemblyName?: string | undefined): void;
-    setDraggingTrackId(idx?: string | undefined): void;
-    setScaleFactor(factor: number): void;
-} & {
-    slide: (viewWidths: number) => void;
-} & {
-    zoom: (targetBpPerPx: number) => void;
-} & {
-    readonly canShowCytobands: boolean;
-    readonly showCytobands: boolean;
-    readonly anyCytobandsExist: boolean;
-    readonly cytobandOffset: number;
-} & {
-    menuItems(): MenuItem[];
-} & {
-    readonly staticBlocks: BlockSet;
-    readonly dynamicBlocks: BlockSet;
-    readonly roundedDynamicBlocks: {
-        start: number;
-        end: number;
-        regionNumber?: number | undefined;
-        reversed?: boolean | undefined;
-        refName: string;
-        assemblyName: string;
-        key: string;
-        offsetPx: number;
-        widthPx: number;
-        variant?: string | undefined;
-        isLeftEndOfDisplayedRegion?: boolean | undefined;
-    }[];
-    readonly visibleLocStrings: string;
-    readonly coarseVisibleLocStrings: string;
-} & {
-    clearView(): void;
-    setCoarseDynamicBlocks(blocks: BlockSet): void;
-    afterAttach(): void;
-} & {
-    exportSvg(opts?: ExportSvgOptions): Promise<void>;
-} & {
-    rubberBandMenuItems(): MenuItem[];
-}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
-export { renderToSvg, RefNameAutocomplete, SearchBox };
-export declare type LinearGenomeViewStateModel = ReturnType<typeof stateModelFactory>;
-export declare type LinearGenomeViewModel = Instance<LinearGenomeViewStateModel>;
-export { default as ReactComponent } from './components/LinearGenomeView';
+import { Region } from '@jbrowse/core/util/types';
+import { MenuItem } from '@jbrowse/core/ui';
+import BaseResult from '@jbrowse/core/TextSearch/BaseResults';
+import { BlockSet, BaseBlock } from '@jbrowse/core/util/blockTypes';
+import { Instance } from 'mobx-state-tree';
+import PluginManager from '@jbrowse/core/PluginManager';
+import { renderToSvg } from './components/LinearGenomeViewSvg';
+import RefNameAutocomplete from './components/RefNameAutocomplete';
+import SearchBox from './components/SearchBox';
+export interface BpOffset {
+    refName?: string;
+    index: number;
+    offset: number;
+    start?: number;
+    end?: number;
+    coord?: number;
+    reversed?: boolean;
+    assemblyName?: string;
+    oob?: boolean;
+}
+export interface ExportSvgOptions {
+    rasterizeLayers?: boolean;
+}
+export interface NavLocation {
+    refName: string;
+    start?: number;
+    end?: number;
+    assemblyName?: string;
+}
+export declare const HEADER_BAR_HEIGHT = 48;
+export declare const HEADER_OVERVIEW_HEIGHT = 20;
+export declare const SCALE_BAR_HEIGHT = 17;
+export declare const RESIZE_HANDLE_HEIGHT = 3;
+export declare const INTER_REGION_PADDING_WIDTH = 2;
+export declare const SPACING = 7;
+export declare const WIDGET_HEIGHT = 32;
+export declare function stateModelFactory(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
+    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+    displayName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
+} & {
+    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+    type: import("mobx-state-tree").ISimpleType<"LinearGenomeView">;
+    offsetPx: import("mobx-state-tree").IType<number | undefined, number, number>;
+    bpPerPx: import("mobx-state-tree").IType<number | undefined, number, number>;
+    displayedRegions: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
+        refName: import("mobx-state-tree").ISimpleType<string>;
+        start: import("mobx-state-tree").ISimpleType<number>;
+        end: import("mobx-state-tree").ISimpleType<number>;
+        reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+    } & {
+        assemblyName: import("mobx-state-tree").ISimpleType<string>;
+    }, {
+        setRefName(newRefName: string): void;
+    }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
+    tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
+    hideHeader: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
+    hideHeaderOverview: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
+    trackSelectorType: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<"hierarchical">, [undefined]>;
+    trackLabels: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+    showCenterLine: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+    showCytobandsSetting: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+}, {
+    width: number;
+} & {
+    menuItems(): MenuItem[];
+} & {
+    setDisplayName(name: string): void;
+    setWidth(newWidth: number): void;
+} & {
+    volatileWidth: number | undefined;
+    minimumBlockWidth: number;
+    draggingTrackId: string | undefined;
+    volatileError: Error | undefined;
+    afterDisplayedRegionsSetCallbacks: Function[];
+    scaleFactor: number;
+    trackRefs: {
+        [key: string]: any;
+    };
+    coarseDynamicBlocks: BaseBlock[];
+    coarseTotalBp: number;
+    leftOffset: BpOffset | undefined;
+    rightOffset: BpOffset | undefined;
+    searchResults: BaseResult[] | undefined;
+    searchQuery: string | undefined;
+    seqDialogDisplayed: boolean;
+} & {
+    readonly width: number;
+    readonly interRegionPaddingWidth: number;
+} & {
+    readonly assemblyErrors: string;
+    readonly assembliesInitialized: boolean;
+    readonly initialized: boolean;
+    readonly hasDisplayedRegions: boolean;
+    readonly isSearchDialogDisplayed: boolean;
+    readonly scaleBarHeight: number;
+    readonly headerHeight: number;
+    readonly trackHeights: any;
+    readonly trackHeightsWithResizeHandles: any;
+    readonly height: any;
+    readonly totalBp: number;
+    readonly maxBpPerPx: number;
+    readonly minBpPerPx: number;
+    readonly error: string | Error;
+    readonly maxOffset: number;
+    readonly minOffset: number;
+    readonly displayedRegionsTotalPx: number;
+    renderProps(): any;
+    readonly assemblyNames: string[];
+    searchScope(assemblyName: string): {
+        assemblyName: string;
+        includeAggregateIndexes: boolean;
+        tracks: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IAnyType> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>>;
+    };
+    /**
+     * @param refName - refName of the displayedRegion
+     * @param coord - coordinate at the displayed Region
+     * @param regionNumber - optional param used as identifier when
+     * there are multiple displayedRegions with the same refName
+     * @returns offsetPx of the displayed region that it lands in
+     */
+    bpToPx({ refName, coord, regionNumber, }: {
+        refName: string;
+        coord: number;
+        regionNumber?: number | undefined;
+    }): {
+        index: number;
+        offsetPx: number;
+    } | undefined;
+    /**
+     *
+     * @param px - px in the view area, return value is the displayed regions
+     * @returns BpOffset of the displayed region that it lands in
+     */
+    pxToBp(px: number): {
+        oob: boolean;
+        coord: number;
+        offset: number;
+        index: number;
+        refName: string;
+        start: number;
+        end: number;
+        reversed: boolean;
+        assemblyName: string;
+    };
+    getTrack(id: string): any;
+    rankSearchResults(results: BaseResult[]): BaseResult[];
+    rewriteOnClicks(trackType: string, viewMenuActions: MenuItem[]): void;
+    readonly trackTypeActions: Map<string, MenuItem[]>;
+    readonly centerLineInfo: {
+        oob: boolean;
+        coord: number;
+        offset: number;
+        index: number;
+        refName: string;
+        start: number;
+        end: number;
+        reversed: boolean;
+        assemblyName: string;
+    } | undefined;
+} & {
+    setShowCytobands(flag: boolean): void;
+    setWidth(newWidth: number): void;
+    setError(error: Error | undefined): void;
+    toggleHeader(): void;
+    toggleHeaderOverview(): void;
+    scrollTo(offsetPx: number): number;
+    zoomTo(bpPerPx: number): number;
+    setOffsets(left: undefined | BpOffset, right: undefined | BpOffset): void;
+    setSearchResults(results: BaseResult[] | undefined, query: string | undefined): void;
+    setSequenceDialogOpen(open: boolean): void;
+    setNewView(bpPerPx: number, offsetPx: number): void;
+    horizontallyFlip(): void;
+    showTrack(trackId: string, initialSnapshot?: {}, displayInitialSnapshot?: {}): any;
+    hideTrack(trackId: string): number;
+} & {
+    moveTrack(movingTrackId: string, targetTrackId: string): void;
+    closeView(): void;
+    toggleTrack(trackId: string): void;
+    setTrackLabels(setting: 'overlapping' | 'offset' | 'hidden'): void;
+    toggleCenterLine(): void;
+    setDisplayedRegions(regions: Region[]): void;
+    activateTrackSelector(): import("@jbrowse/core/util").Widget;
+    navToLocString(locString: string, optAssemblyName?: string | undefined): void;
+    /**
+     * Navigate to a location based on its refName and optionally start, end,
+     * and assemblyName. Can handle if there are multiple displayedRegions
+     * from same refName. Only navigates to a location if it is entirely
+     * within a displayedRegion. Navigates to the first matching location
+     * encountered.
+     *
+     * Throws an error if navigation was unsuccessful
+     *
+     * @param location - a proposed location to navigate to
+     */
+    navTo(query: NavLocation): void;
+    navToMultiple(locations: NavLocation[]): void;
+    /**
+     * Navigate to a location based on user clicking and dragging on the
+     * overview scale bar to select a region to zoom into.
+     * Can handle if there are multiple displayedRegions from same refName.
+     * Only navigates to a location if it is entirely within a displayedRegion.
+     *
+     * @param leftPx- `object as {start, end, index, offset}`, offset = start of user drag
+     * @param rightPx- `object as {start, end, index, offset}`, offset = end of user drag
+     */
+    zoomToDisplayedRegions(leftPx: BpOffset, rightPx: BpOffset): void;
+    /**
+     * Helper method for the fetchSequence.
+     * Retrieves the corresponding regions that were selected by the rubberband
+     *
+     * @param leftOffset - `object as {start, end, index, offset}`, offset = start of user drag
+     * @param rightOffset - `object as {start, end, index, offset}`, offset = end of user drag
+     * @returns array of Region[]
+     */
+    getSelectedRegions(leftOffset: BpOffset | undefined, rightOffset: BpOffset | undefined): {
+        start: number;
+        end: number;
+        regionNumber?: number | undefined;
+        reversed?: boolean | undefined;
+        refName: string;
+        assemblyName: string;
+        key: string;
+        offsetPx: number;
+        widthPx: number;
+        variant?: string | undefined;
+        isLeftEndOfDisplayedRegion?: boolean | undefined;
+    }[];
+    afterDisplayedRegionsSet(cb: Function): void;
+    /**
+     * offset is the base-pair-offset in the displayed region, index is the index of the
+     * displayed region in the linear genome view
+     *
+     * @param start - object as `{start, end, offset, index}`
+     * @param end - object as `{start, end, offset, index}`
+     */
+    moveTo(start: BpOffset, end: BpOffset): void;
+    horizontalScroll(distance: number): number;
+    /**
+     * scrolls the view to center on the given bp. if that is not in any
+     * of the displayed regions, does nothing
+     * @param bp - basepair at which you want to center the view
+     * @param refName - refName of the displayedRegion you are centering at
+     * @param regionIndex - index of the displayedRegion
+     */
+    centerAt(bp: number, refName: string, regionIndex: number): void;
+    center(): void;
+    showAllRegions(): void;
+    showAllRegionsInAssembly(assemblyName?: string | undefined): void;
+    setDraggingTrackId(idx?: string | undefined): void;
+    setScaleFactor(factor: number): void;
+} & {
+    slide: (viewWidths: number) => void;
+} & {
+    zoom: (targetBpPerPx: number) => void;
+} & {
+    readonly canShowCytobands: boolean;
+    readonly showCytobands: boolean;
+    readonly anyCytobandsExist: boolean;
+    readonly cytobandOffset: number;
+} & {
+    menuItems(): MenuItem[];
+} & {
+    readonly staticBlocks: BlockSet;
+    readonly dynamicBlocks: BlockSet;
+    readonly roundedDynamicBlocks: {
+        start: number;
+        end: number;
+        regionNumber?: number | undefined;
+        reversed?: boolean | undefined;
+        refName: string;
+        assemblyName: string;
+        key: string;
+        offsetPx: number;
+        widthPx: number;
+        variant?: string | undefined;
+        isLeftEndOfDisplayedRegion?: boolean | undefined;
+    }[];
+    readonly visibleLocStrings: string;
+    readonly coarseVisibleLocStrings: string;
+} & {
+    clearView(): void;
+    setCoarseDynamicBlocks(blocks: BlockSet): void;
+    afterAttach(): void;
+} & {
+    exportSvg(opts?: ExportSvgOptions): Promise<void>;
+} & {
+    rubberBandMenuItems(): MenuItem[];
+}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
+export { renderToSvg, RefNameAutocomplete, SearchBox };
+export declare type LinearGenomeViewStateModel = ReturnType<typeof stateModelFactory>;
+export declare type LinearGenomeViewModel = Instance<LinearGenomeViewStateModel>;
+export { default as ReactComponent } from './components/LinearGenomeView';