@gen-epix/ui 1.14.4 → 1.15.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (739) hide show
  1. package/README.md +3 -3
  2. package/dist/index.js +27287 -27948
  3. package/package.json +94 -84
  4. package/src/@types/environment.d.ts +54 -0
  5. package/src/api/api.ts +43576 -0
  6. package/src/api/base.ts +111 -0
  7. package/src/api/common.ts +168 -0
  8. package/src/api/configuration.ts +118 -0
  9. package/src/api/index.ts +20 -0
  10. package/src/assets/icons/CollectionIcon.svg +1 -0
  11. package/src/assets/icons/DnaIcon.svg +1 -0
  12. package/src/assets/icons/VirusIcon.svg +1 -0
  13. package/src/assets/logo/logo-rijksoverheid.svg +42 -0
  14. package/src/assets/logo/logo-rivm.svg +6 -0
  15. package/src/classes/Subject/Subject.ts +26 -0
  16. package/src/classes/Subject/index.ts +1 -0
  17. package/src/classes/TableEventBus/TableEventBus.ts +14 -0
  18. package/src/classes/TableEventBus/index.ts +1 -0
  19. package/src/classes/abstracts/EventBusAbstract/EventBusAbstract.ts +37 -0
  20. package/src/classes/abstracts/EventBusAbstract/index.ts +1 -0
  21. package/src/classes/abstracts/FilterAbstract/FilterAbstract.ts +54 -0
  22. package/src/classes/abstracts/FilterAbstract/index.ts +1 -0
  23. package/src/classes/abstracts/SubscribableAbstract/SubscribableAbstract.ts +20 -0
  24. package/src/classes/abstracts/SubscribableAbstract/index.ts +1 -0
  25. package/src/classes/errors/UploadError.ts +11 -0
  26. package/src/classes/errors/index.ts +1 -0
  27. package/src/classes/filters/BooleanFilter.ts +31 -0
  28. package/src/classes/filters/DateFilter.ts +133 -0
  29. package/src/classes/filters/GeoFilter.ts +60 -0
  30. package/src/classes/filters/MultiSelectFilter.ts +70 -0
  31. package/src/classes/filters/NumberRangeFilter.ts +82 -0
  32. package/src/classes/filters/SelectionFilter.ts +25 -0
  33. package/src/classes/filters/TextFilter.ts +36 -0
  34. package/src/classes/filters/TreeFilter.ts +22 -0
  35. package/src/classes/managers/AuthenticationManager/AuthenticationManager.ts +94 -0
  36. package/src/classes/managers/AuthenticationManager/index.ts +1 -0
  37. package/src/classes/managers/AuthorizationManager/AuthorizationManager.ts +70 -0
  38. package/src/classes/managers/AuthorizationManager/index.ts +1 -0
  39. package/src/classes/managers/BackendVersionManager/BackendVersionManager.ts +23 -0
  40. package/src/classes/managers/BackendVersionManager/index.ts +1 -0
  41. package/src/classes/managers/BreadcrumbManager/BreadcrumbManager.ts +30 -0
  42. package/src/classes/managers/BreadcrumbManager/index.ts +1 -0
  43. package/src/classes/managers/ConfigManager/ConfigManager.ts +31 -0
  44. package/src/classes/managers/ConfigManager/index.ts +1 -0
  45. package/src/classes/managers/DevicePixelRatioManager/DevicePixelRatioManager.ts +27 -0
  46. package/src/classes/managers/DevicePixelRatioManager/index.ts +1 -0
  47. package/src/classes/managers/EmotionCacheManager/EmotionCacheManager.ts +27 -0
  48. package/src/classes/managers/EmotionCacheManager/index.ts +1 -0
  49. package/src/classes/managers/EpiDataManager/EpiDataManager.ts +196 -0
  50. package/src/classes/managers/EpiDataManager/index.ts +1 -0
  51. package/src/classes/managers/EpiEventBusManager/EpiEventBusManager.ts +61 -0
  52. package/src/classes/managers/EpiEventBusManager/index.ts +1 -0
  53. package/src/classes/managers/EpiHighlightingManager/EpiHighlightingManager.ts +32 -0
  54. package/src/classes/managers/EpiHighlightingManager/index.ts +1 -0
  55. package/src/classes/managers/EpiLineListCaseSetMembersManager/EpiListsCaseSetMembersManager.ts +118 -0
  56. package/src/classes/managers/EpiLineListCaseSetMembersManager/index.ts +1 -0
  57. package/src/classes/managers/FeatureFlagsManager/FeatureFlagsManager.ts +30 -0
  58. package/src/classes/managers/FeatureFlagsManager/index.ts +1 -0
  59. package/src/classes/managers/I18nManager/I18nManager.ts +105 -0
  60. package/src/classes/managers/I18nManager/index.ts +1 -0
  61. package/src/classes/managers/InactivityManager/InactivityManager.ts +119 -0
  62. package/src/classes/managers/InactivityManager/index.ts +1 -0
  63. package/src/classes/managers/KeyboardShortcutManager/KeyboardShortcutManager.ts +78 -0
  64. package/src/classes/managers/KeyboardShortcutManager/index.ts +1 -0
  65. package/src/classes/managers/LogManager/LogManager.ts +151 -0
  66. package/src/classes/managers/LogManager/index.ts +1 -0
  67. package/src/classes/managers/NavigationHistoryManager/NavigationHistoryManager.ts +16 -0
  68. package/src/classes/managers/NavigationHistoryManager/index.ts +1 -0
  69. package/src/classes/managers/NotificationManager/NotificationManager.ts +104 -0
  70. package/src/classes/managers/NotificationManager/index.ts +1 -0
  71. package/src/classes/managers/PageEventBusManager/PageEventBusManager.ts +116 -0
  72. package/src/classes/managers/PageEventBusManager/index.ts +1 -0
  73. package/src/classes/managers/QueryClientManager/QueryClientManager.ts +51 -0
  74. package/src/classes/managers/QueryClientManager/index.ts +1 -0
  75. package/src/classes/managers/RouterManager/RouterManager.ts +25 -0
  76. package/src/classes/managers/RouterManager/index.ts +1 -0
  77. package/src/classes/managers/UserSettingsManager/UserSettingsManager.ts +16 -0
  78. package/src/classes/managers/UserSettingsManager/index.ts +1 -0
  79. package/src/classes/managers/WindowManager/WindowManager.test.ts +23 -0
  80. package/src/classes/managers/WindowManager/WindowManager.ts +26 -0
  81. package/src/classes/managers/WindowManager/index.ts +1 -0
  82. package/src/components/app/App/App.tsx +58 -0
  83. package/src/components/app/App/index.ts +1 -0
  84. package/src/components/app/ApplicationBootstrap/ApplicationBootstrap.tsx +223 -0
  85. package/src/components/app/ApplicationBootstrap/index.ts +1 -0
  86. package/src/components/app/RouterRoot/RouterRoot.tsx +187 -0
  87. package/src/components/app/RouterRoot/index.ts +1 -0
  88. package/src/components/epi/EpiAddCasesToEventDialog/EpiAddCasesToEventDialog.tsx +347 -0
  89. package/src/components/epi/EpiAddCasesToEventDialog/EpiAddCasesToEventDialogSuccessNotificationMessage.tsx +38 -0
  90. package/src/components/epi/EpiAddCasesToEventDialog/index.ts +1 -0
  91. package/src/components/epi/EpiBulkEditCaseDialog/EpiBulkEditCaseDialog.tsx +61 -0
  92. package/src/components/epi/EpiBulkEditCaseDialog/index.ts +1 -0
  93. package/src/components/epi/EpiCaseInfoDialog/EpiCaseCaseSetInfo.tsx +137 -0
  94. package/src/components/epi/EpiCaseInfoDialog/EpiCaseContent.tsx +127 -0
  95. package/src/components/epi/EpiCaseInfoDialog/EpiCaseForm.tsx +111 -0
  96. package/src/components/epi/EpiCaseInfoDialog/EpiCaseInfoDialog.tsx +377 -0
  97. package/src/components/epi/EpiCaseInfoDialog/EpiCaseSharingForm.tsx +140 -0
  98. package/src/components/epi/EpiCaseInfoDialog/EpiCaseSharingInfo.tsx +23 -0
  99. package/src/components/epi/EpiCaseInfoDialog/EpiReadOnlyCaseContent.tsx +89 -0
  100. package/src/components/epi/EpiCaseInfoDialog/index.ts +1 -0
  101. package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetContent.tsx +108 -0
  102. package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetDescription.tsx +34 -0
  103. package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetForm.tsx +151 -0
  104. package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetInfoDialog.tsx +389 -0
  105. package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetSharingForm.tsx +155 -0
  106. package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetSharingInfo.tsx +23 -0
  107. package/src/components/epi/EpiCaseSetInfoDialog/index.ts +1 -0
  108. package/src/components/epi/EpiCaseSummary/EpiCaseSummary.tsx +141 -0
  109. package/src/components/epi/EpiCaseSummary/index.ts +1 -0
  110. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoAccessRights.tsx +91 -0
  111. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoColAccessRights.tsx +118 -0
  112. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoData.tsx +38 -0
  113. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoDialog.tsx +39 -0
  114. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoDialogContent.tsx +169 -0
  115. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoDialogWithLoader.tsx +42 -0
  116. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoRegions.tsx +87 -0
  117. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoTrees.tsx +73 -0
  118. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoValues.tsx +61 -0
  119. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoVariableDetails.tsx +151 -0
  120. package/src/components/epi/EpiCaseTypeInfoDialog/index.ts +10 -0
  121. package/src/components/epi/EpiCasesAlreadyInCaseSetWarning/EpiCasesAlreadyInCaseSetWarning.tsx +190 -0
  122. package/src/components/epi/EpiCasesAlreadyInCaseSetWarning/EpiCasesAlreadyInCaseSetWarningCaseSetLink.tsx +62 -0
  123. package/src/components/epi/EpiCasesAlreadyInCaseSetWarning/index.ts +1 -0
  124. package/src/components/epi/EpiCompletCaseTypeLoader/EpiCompletCaseTypeLoader.tsx +87 -0
  125. package/src/components/epi/EpiCompletCaseTypeLoader/index.ts +1 -0
  126. package/src/components/epi/EpiContactDetailsDialog/EpiContactDetailsDialog.tsx +151 -0
  127. package/src/components/epi/EpiContactDetailsDialog/index.ts +1 -0
  128. package/src/components/epi/EpiContextMenu/EpiContextMenu.tsx +155 -0
  129. package/src/components/epi/EpiContextMenu/index.ts +1 -0
  130. package/src/components/epi/EpiCreateEventDialog/EpiCreateEventDialog.tsx +386 -0
  131. package/src/components/epi/EpiCreateEventDialog/EpiCreateEventDialogSuccessNotificationMessage.tsx +30 -0
  132. package/src/components/epi/EpiCreateEventDialog/index.ts +1 -0
  133. package/src/components/epi/EpiCurve/EpiCurve.tsx +525 -0
  134. package/src/components/epi/EpiCurve/index.ts +1 -0
  135. package/src/components/epi/EpiCustomTabPanel/EpiCustomTabPanel.tsx +27 -0
  136. package/src/components/epi/EpiCustomTabPanel/index.ts +1 -0
  137. package/src/components/epi/EpiDashboard/EpiDashboard.tsx +390 -0
  138. package/src/components/epi/EpiDashboard/EpiDashboardDownloadSidebarItem.tsx +154 -0
  139. package/src/components/epi/EpiDashboard/EpiDashboardGeneralSettingsForm.tsx +89 -0
  140. package/src/components/epi/EpiDashboard/EpiDashboardLayoutRenderer.tsx +248 -0
  141. package/src/components/epi/EpiDashboard/EpiDashboardLayoutSettingsForm.tsx +160 -0
  142. package/src/components/epi/EpiDashboard/EpiDashboardSettingsSidebarItem.tsx +93 -0
  143. package/src/components/epi/EpiDashboard/EpiDashboardTreeSettingsForm.tsx +90 -0
  144. package/src/components/epi/EpiDashboard/index.ts +1 -0
  145. package/src/components/epi/EpiDashboardStoreLoader/EpiDashboardStoreLoader.tsx +34 -0
  146. package/src/components/epi/EpiDashboardStoreLoader/EpiDashboardStoreLoaderContent.tsx +73 -0
  147. package/src/components/epi/EpiDashboardStoreLoader/index.ts +2 -0
  148. package/src/components/epi/EpiDashboardStoreLoader/withEpiDashboardStore.tsx +19 -0
  149. package/src/components/epi/EpiDataCollectionAccessInfo/EpiDataCollectionAccessInfo.tsx +88 -0
  150. package/src/components/epi/EpiDataCollectionAccessInfo/index.ts +1 -0
  151. package/src/components/epi/EpiFindSimilarCasesDialog/EpiFindSimilarCasesDialog.tsx +302 -0
  152. package/src/components/epi/EpiFindSimilarCasesDialog/index.ts +1 -0
  153. package/src/components/epi/EpiLegendaItem/EpiLegendaItem.tsx +106 -0
  154. package/src/components/epi/EpiLegendaItem/index.ts +1 -0
  155. package/src/components/epi/EpiLineList/EpiLineList.tsx +492 -0
  156. package/src/components/epi/EpiLineList/EpiLineListPrimaryMenu.tsx +189 -0
  157. package/src/components/epi/EpiLineList/EpiLineListSecondaryMenu.tsx +56 -0
  158. package/src/components/epi/EpiLineList/EpiLineListTitle.tsx +28 -0
  159. package/src/components/epi/EpiLineList/index.ts +1 -0
  160. package/src/components/epi/EpiLineList/useEpiLineListEmitDownloadOptions.tsx +102 -0
  161. package/src/components/epi/EpiMap/EpiMap.tsx +547 -0
  162. package/src/components/epi/EpiMap/index.ts +1 -0
  163. package/src/components/epi/EpiRemoveCasesFromEventDialog/EpiRemoveCasesFromEventDialog.tsx +169 -0
  164. package/src/components/epi/EpiRemoveCasesFromEventDialog/index.ts +1 -0
  165. package/src/components/epi/EpiRemoveFindSimilarCasesResultDialog/EpiRemoveFindSimilarCasesResultDialog.tsx +216 -0
  166. package/src/components/epi/EpiSequenceDownloadDialog/EpiSequenceDownloadDialog.tsx +151 -0
  167. package/src/components/epi/EpiSequenceDownloadDialog/index.ts +1 -0
  168. package/src/components/epi/EpiStratification/EpiStratification.tsx +241 -0
  169. package/src/components/epi/EpiStratification/index.ts +1 -0
  170. package/src/components/epi/EpiTree/EpiTree.tsx +906 -0
  171. package/src/components/epi/EpiTree/index.ts +1 -0
  172. package/src/components/epi/EpiTreeDescription/EpiTreeDescription.tsx +71 -0
  173. package/src/components/epi/EpiTreeDescription/index.ts +1 -0
  174. package/src/components/epi/EpiUpload/EpiUpload.tsx +107 -0
  175. package/src/components/epi/EpiUpload/EpiUploadCaseResultTable.tsx +383 -0
  176. package/src/components/epi/EpiUpload/EpiUploadCreateCases.tsx +266 -0
  177. package/src/components/epi/EpiUpload/EpiUploadMapColumns.tsx +261 -0
  178. package/src/components/epi/EpiUpload/EpiUploadMapSequences.tsx +332 -0
  179. package/src/components/epi/EpiUpload/EpiUploadNavigation.tsx +52 -0
  180. package/src/components/epi/EpiUpload/EpiUploadSelectFile.tsx +285 -0
  181. package/src/components/epi/EpiUpload/EpiUploadSelectSequenceFiles.tsx +375 -0
  182. package/src/components/epi/EpiUpload/EpiUploadValidate.tsx +199 -0
  183. package/src/components/epi/EpiUpload/EpiUploadValidateNavigation.tsx +34 -0
  184. package/src/components/epi/EpiUpload/index.ts +1 -0
  185. package/src/components/epi/EpiUserRightsDialog/EpiUserRightsDialog.tsx +101 -0
  186. package/src/components/epi/EpiUserRightsDialog/EpiUserRightsDialogCaseAccessPolicy.tsx +160 -0
  187. package/src/components/epi/EpiUserRightsDialog/index.ts +1 -0
  188. package/src/components/epi/EpiWarning/EpiWarning.tsx +39 -0
  189. package/src/components/epi/EpiWarning/index.ts +1 -0
  190. package/src/components/epi/EpiWidget/EpiWidget.tsx +255 -0
  191. package/src/components/epi/EpiWidget/index.ts +1 -0
  192. package/src/components/epi/EpiWidgetHeaderIconButton/EpiWidgetHeaderIconButton.tsx +40 -0
  193. package/src/components/epi/EpiWidgetHeaderIconButton/index.ts +1 -0
  194. package/src/components/epi/EpiWidgetMenu/EpiWidgetMenu.tsx +56 -0
  195. package/src/components/epi/EpiWidgetMenu/index.ts +1 -0
  196. package/src/components/epi/EpiWidgetUnavailable/EpiWidgetUnavailable.tsx +51 -0
  197. package/src/components/epi/EpiWidgetUnavailable/index.ts +1 -0
  198. package/src/components/filters/BooleanFilterField/BooleanFilterField.tsx +26 -0
  199. package/src/components/filters/BooleanFilterField/index.ts +1 -0
  200. package/src/components/filters/DateFilterField/DateFilterField.tsx +23 -0
  201. package/src/components/filters/DateFilterField/index.ts +1 -0
  202. package/src/components/filters/GeoFilterField/GeoFilterField.tsx +32 -0
  203. package/src/components/filters/GeoFilterField/index.ts +1 -0
  204. package/src/components/filters/MultiSelectFilterField/MultiSelectFilterField.tsx +31 -0
  205. package/src/components/filters/MultiSelectFilterField/index.ts +1 -0
  206. package/src/components/filters/NumberRangeFilterField/NumberRangeFilterField.tsx +20 -0
  207. package/src/components/filters/NumberRangeFilterField/index.ts +1 -0
  208. package/src/components/filters/TextFilterField/TextFilterField.tsx +18 -0
  209. package/src/components/filters/TextFilterField/index.ts +1 -0
  210. package/src/components/form/fields/Autocomplete/Autocomplete.tsx +270 -0
  211. package/src/components/form/fields/Autocomplete/index.ts +1 -0
  212. package/src/components/form/fields/CheckboxGroup/CheckboxGroup.tsx +192 -0
  213. package/src/components/form/fields/CheckboxGroup/index.ts +1 -0
  214. package/src/components/form/fields/DatePicker/DatePicker.tsx +167 -0
  215. package/src/components/form/fields/DatePicker/index.ts +1 -0
  216. package/src/components/form/fields/DateRangePicker/DateRangePicker.tsx +359 -0
  217. package/src/components/form/fields/DateRangePicker/index.ts +1 -0
  218. package/src/components/form/fields/NumberField/NumberField.tsx +277 -0
  219. package/src/components/form/fields/NumberField/index.ts +1 -0
  220. package/src/components/form/fields/NumberRangeInput/NumberRangeInput.tsx +297 -0
  221. package/src/components/form/fields/NumberRangeInput/index.ts +1 -0
  222. package/src/components/form/fields/RadioGroup/RadioGroup.tsx +130 -0
  223. package/src/components/form/fields/RadioGroup/index.ts +1 -0
  224. package/src/components/form/fields/RichTextEditor/RichTextEditor.tsx +321 -0
  225. package/src/components/form/fields/RichTextEditor/RichTextEditorContent.tsx +34 -0
  226. package/src/components/form/fields/RichTextEditor/index.ts +2 -0
  227. package/src/components/form/fields/RichTextEditor/useRichTextEditorExtensions.ts +174 -0
  228. package/src/components/form/fields/Select/Select.tsx +219 -0
  229. package/src/components/form/fields/Select/index.ts +1 -0
  230. package/src/components/form/fields/Switch/Switch.tsx +116 -0
  231. package/src/components/form/fields/Switch/index.ts +1 -0
  232. package/src/components/form/fields/TextField/TextField.tsx +170 -0
  233. package/src/components/form/fields/TextField/index.ts +1 -0
  234. package/src/components/form/fields/ToggleButtonGroup/ToggleButtonGroup.tsx +118 -0
  235. package/src/components/form/fields/ToggleButtonGroup/index.ts +1 -0
  236. package/src/components/form/fields/TransferList/TransferList.tsx +360 -0
  237. package/src/components/form/fields/TransferList/index.ts +1 -0
  238. package/src/components/form/fields/UploadButton/UploadButton.tsx +157 -0
  239. package/src/components/form/helpers/FormFieldHelperText/FormFieldHelperText.tsx +68 -0
  240. package/src/components/form/helpers/FormFieldHelperText/index.ts +1 -0
  241. package/src/components/form/helpers/FormFieldLoadingIndicator/FormFieldLoadingIndicator.tsx +22 -0
  242. package/src/components/form/helpers/FormFieldLoadingIndicator/index.ts +1 -0
  243. package/src/components/form/helpers/GenericForm/GenericForm.tsx +187 -0
  244. package/src/components/form/helpers/GenericForm/index.ts +1 -0
  245. package/src/components/ui/ApplicationBar/ApplicationBar.tsx +74 -0
  246. package/src/components/ui/ApplicationBar/ApplicationBarActions.tsx +124 -0
  247. package/src/components/ui/ApplicationBar/ApplicationBarActionsFeedbackItem.tsx +102 -0
  248. package/src/components/ui/ApplicationBar/ApplicationBarActionsInfotem.tsx +60 -0
  249. package/src/components/ui/ApplicationBar/ApplicationBarActionsNotificationsItem.tsx +82 -0
  250. package/src/components/ui/ApplicationBar/ApplicationBarActionsOrganizationSwitcherItem.tsx +58 -0
  251. package/src/components/ui/ApplicationBar/ApplicationBarActionsOutagesItem.tsx +75 -0
  252. package/src/components/ui/ApplicationBar/ApplicationBarActionsUserItem.tsx +60 -0
  253. package/src/components/ui/ApplicationBar/ApplicationBarNavigationMenu.tsx +159 -0
  254. package/src/components/ui/ApplicationBar/InfoMenu.tsx +120 -0
  255. package/src/components/ui/ApplicationBar/UserMenu.tsx +208 -0
  256. package/src/components/ui/ApplicationBar/UserOrganizationAdminMenuItem.tsx +69 -0
  257. package/src/components/ui/ApplicationBar/UserOwnOrganizationMenuItem.tsx +54 -0
  258. package/src/components/ui/ApplicationBar/index.ts +1 -0
  259. package/src/components/ui/ApplicationFooter/ApplicationFooter.tsx +121 -0
  260. package/src/components/ui/ApplicationFooter/ApplicationFooterLink.tsx +48 -0
  261. package/src/components/ui/ApplicationFooter/ApplicationFooterLinkSection.tsx +56 -0
  262. package/src/components/ui/ApplicationFooter/index.ts +1 -0
  263. package/src/components/ui/AuthenticationWrapper/AuthenticationWrapper.tsx +208 -0
  264. package/src/components/ui/AuthenticationWrapper/index.ts +1 -0
  265. package/src/components/ui/AuthorizationWrapper/AuthorizationWrapper.tsx +75 -0
  266. package/src/components/ui/AuthorizationWrapper/index.ts +1 -0
  267. package/src/components/ui/Breadcrumbs/Breadcrumbs.tsx +92 -0
  268. package/src/components/ui/Breadcrumbs/index.ts +1 -0
  269. package/src/components/ui/Confirmation/Confirmation.tsx +10 -0
  270. package/src/components/ui/Confirmation/ConfirmationRender.tsx +81 -0
  271. package/src/components/ui/Confirmation/index.ts +2 -0
  272. package/src/components/ui/ConsentDialog/ConsentDialog.tsx +57 -0
  273. package/src/components/ui/ConsentDialog/index.ts +1 -0
  274. package/src/components/ui/CopyToClipboardButton/CopyToClipboardButton.tsx +94 -0
  275. package/src/components/ui/CopyToClipboardButton/index.ts +1 -0
  276. package/src/components/ui/Dialog/Dialog.tsx +196 -0
  277. package/src/components/ui/Dialog/index.ts +1 -0
  278. package/src/components/ui/FileSelector/FileSelector.tsx +358 -0
  279. package/src/components/ui/FileSelector/index.ts +1 -0
  280. package/src/components/ui/GenericErrorMessage/GenericErrorMessage.tsx +168 -0
  281. package/src/components/ui/GenericErrorMessage/index.ts +1 -0
  282. package/src/components/ui/HomePageTrends/HomePageTrendCard.tsx +132 -0
  283. package/src/components/ui/HomePageTrends/HomePageTrends.tsx +312 -0
  284. package/src/components/ui/HomePageTrends/index.ts +1 -0
  285. package/src/components/ui/LicensesDialog/LicensesDialog.tsx +231 -0
  286. package/src/components/ui/LicensesDialog/index.ts +1 -0
  287. package/src/components/ui/LinearProgressWithLabel/LinearProgressWithLabel.tsx +31 -0
  288. package/src/components/ui/LinearProgressWithLabel/index.ts +1 -0
  289. package/src/components/ui/LoadingIndicator/LoadingIndicator.tsx +11 -0
  290. package/src/components/ui/LoadingIndicator/index.ts +1 -0
  291. package/src/components/ui/MyPermissionsDialog/MyPermissionsDialog.tsx +95 -0
  292. package/src/components/ui/MyPermissionsDialog/index.ts +1 -0
  293. package/src/components/ui/NavLink/NavLink.tsx +47 -0
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  604. package/src/pages/RouterErrorPage/RouterErrorPage.tsx +23 -0
  605. package/src/pages/RouterErrorPage/index.ts +1 -0
  606. package/src/pages/TrendsPage/TrendsPage.tsx +17 -0
  607. package/src/pages/TrendsPage/index.ts +1 -0
  608. package/src/pages/UploadPage/UploadPage.tsx +40 -0
  609. package/src/pages/UploadPage/index.ts +1 -0
  610. package/src/pages/UserAccessCasePoliciesAdminPage/UserAccessCasePoliciesAdminPage.tsx +209 -0
  611. package/src/pages/UserAccessCasePoliciesAdminPage/index.ts +1 -0
  612. package/src/pages/UserEffectiveRightsAdminPage/UserEffectiveRightsAdminPage.tsx +331 -0
  613. package/src/pages/UserEffectiveRightsAdminPage/index.ts +1 -0
  614. package/src/pages/UserEffectiveRightsTesterAdminPage/UserEffectiveRightsTesterAdminPage.tsx +283 -0
  615. package/src/pages/UserEffectiveRightsTesterAdminPage/index.ts +1 -0
  616. package/src/pages/UserInvitationsAdminPage/UserInvitationConsumeDialog.tsx +143 -0
  617. package/src/pages/UserInvitationsAdminPage/UserInvitationShareDialog.tsx +100 -0
  618. package/src/pages/UserInvitationsAdminPage/UserInvitationsAdminPage.tsx +218 -0
  619. package/src/pages/UserInvitationsAdminPage/index.ts +1 -0
  620. package/src/pages/UserShareCasePoliciesAdminPage/UserShareCasePoliciesAdminPage.tsx +183 -0
  621. package/src/pages/UserShareCasePoliciesAdminPage/index.ts +1 -0
  622. package/src/pages/UsersAdminPage/UsersAdminPage.tsx +240 -0
  623. package/src/pages/UsersAdminPage/index.ts +1 -0
  624. package/src/routes/adminRoutes.tsx +801 -0
  625. package/src/routes/index.ts +2 -0
  626. package/src/routes/routes.tsx +235 -0
  627. package/src/setup/index.ts +1 -0
  628. package/src/setup/setup.ts +5 -0
  629. package/src/setup/yup.ts +203 -0
  630. package/src/stores/epiDashboardStore/epiDashboardStore.ts +750 -0
  631. package/src/stores/epiDashboardStore/epiDashboardStoreContext.tsx +6 -0
  632. package/src/stores/epiDashboardStore/index.ts +2 -0
  633. package/src/stores/epiUploadStore/epiUploadStore.ts +351 -0
  634. package/src/stores/epiUploadStore/epiUploadStoreContext.tsx +6 -0
  635. package/src/stores/epiUploadStore/index.ts +2 -0
  636. package/src/stores/oidcStore/index.ts +1 -0
  637. package/src/stores/oidcStore/oidcStore.ts +43 -0
  638. package/src/stores/outagesStore/index.ts +1 -0
  639. package/src/stores/outagesStore/outagesStore.ts +31 -0
  640. package/src/stores/tableStore/TableStoreContext.tsx +6 -0
  641. package/src/stores/tableStore/TableStoreContextProvider.tsx +20 -0
  642. package/src/stores/tableStore/index.ts +4 -0
  643. package/src/stores/tableStore/tableStore.ts +547 -0
  644. package/src/stores/tableStore/useTableStoreContext.tsx +7 -0
  645. package/src/stores/userProfileStore/index.ts +1 -0
  646. package/src/stores/userProfileStore/userProfileStore.ts +112 -0
  647. package/src/test/integration/lib/render.tsx +33 -0
  648. package/src/test/integration/tests/integration-example/HelloWorld.test.tsx +14 -0
  649. package/src/test/integration/tests/integration-example/HelloWorld.tsx +9 -0
  650. package/src/test/setup-browser.ts +3 -0
  651. package/src/test/setup-jsdom.ts +6 -0
  652. package/src/test/setup.ts +9 -0
  653. package/src/utils/AbacUtil/AbacUtil.ts +21 -0
  654. package/src/utils/AbacUtil/index.ts +1 -0
  655. package/src/utils/AxiosUtil/AxiosUtil.test.ts +66 -0
  656. package/src/utils/AxiosUtil/AxiosUtil.ts +47 -0
  657. package/src/utils/AxiosUtil/index.ts +1 -0
  658. package/src/utils/CaseSelectionUtil/CaseSelectionUtil.ts +32 -0
  659. package/src/utils/CaseSelectionUtil/index.ts +1 -0
  660. package/src/utils/CaseSetUtil/CaseSetUtil.ts +13 -0
  661. package/src/utils/CaseSetUtil/index.ts +1 -0
  662. package/src/utils/CaseTypeUtil/CaseTypeUtil.ts +178 -0
  663. package/src/utils/CaseTypeUtil/index.ts +1 -0
  664. package/src/utils/CaseUtil/CaseUtil.ts +401 -0
  665. package/src/utils/CaseUtil/index.ts +1 -0
  666. package/src/utils/DashboardUtil/DashboardUtil.ts +46 -0
  667. package/src/utils/DashboardUtil/index.ts +1 -0
  668. package/src/utils/DataHookUtil/DataHookUtil.ts +137 -0
  669. package/src/utils/DataHookUtil/index.ts +1 -0
  670. package/src/utils/DataSetUtil/DataSetUtil.ts +70 -0
  671. package/src/utils/DataSetUtil/index.ts +1 -0
  672. package/src/utils/DataUtil/DataUtil.ts +84 -0
  673. package/src/utils/DataUtil/index.ts +1 -0
  674. package/src/utils/DownloadUtil/DownloadUtil.ts +237 -0
  675. package/src/utils/DownloadUtil/index.ts +1 -0
  676. package/src/utils/EffectiveRightsUtil/EffectiveRightsUtil.ts +142 -0
  677. package/src/utils/EffectiveRightsUtil/index.ts +1 -0
  678. package/src/utils/EpiCurveUtil/EpiCurveUtil.ts +180 -0
  679. package/src/utils/EpiCurveUtil/index.ts +1 -0
  680. package/src/utils/EpiFilterUtil/EpiFilterUtil.ts +232 -0
  681. package/src/utils/EpiFilterUtil/index.ts +1 -0
  682. package/src/utils/EpiLineListUtil/EpiLineListUtil.ts +15 -0
  683. package/src/utils/EpiLineListUtil/index.ts +1 -0
  684. package/src/utils/EpiMapUtil/EpiMapUtil.test.ts +54 -0
  685. package/src/utils/EpiMapUtil/EpiMapUtil.ts +80 -0
  686. package/src/utils/EpiMapUtil/index.ts +1 -0
  687. package/src/utils/EpiTreeUtil/EpiTreeUtil.test.ts +2467 -0
  688. package/src/utils/EpiTreeUtil/EpiTreeUtil.ts +1055 -0
  689. package/src/utils/EpiTreeUtil/index.ts +1 -0
  690. package/src/utils/EpiUploadUtil/EpiUploadUtil.ts +857 -0
  691. package/src/utils/EpiUploadUtil/index.ts +1 -0
  692. package/src/utils/FileUtil/FileUtil.ts +22 -0
  693. package/src/utils/FileUtil/index.ts +1 -0
  694. package/src/utils/FormUtil/FormUtil.test.ts +36 -0
  695. package/src/utils/FormUtil/FormUtil.ts +63 -0
  696. package/src/utils/FormUtil/index.ts +1 -0
  697. package/src/utils/MenuDataUtil/MenuDataUtil.ts +54 -0
  698. package/src/utils/MenuDataUtil/index.ts +1 -0
  699. package/src/utils/NewickUtil/NewickUtil.test.ts +187 -0
  700. package/src/utils/NewickUtil/NewickUtil.ts +69 -0
  701. package/src/utils/NewickUtil/index.ts +1 -0
  702. package/src/utils/NotificationUtil/NotificationUtil.ts +28 -0
  703. package/src/utils/NotificationUtil/index.ts +1 -0
  704. package/src/utils/NumberUtil/NumberUtil.test.ts +113 -0
  705. package/src/utils/NumberUtil/NumberUtil.ts +67 -0
  706. package/src/utils/NumberUtil/index.ts +1 -0
  707. package/src/utils/ObjectUtil/ObjectUtil.test.ts +43 -0
  708. package/src/utils/ObjectUtil/ObjectUtil.ts +28 -0
  709. package/src/utils/ObjectUtil/index.ts +1 -0
  710. package/src/utils/OutageUtil/OutageUtil.test.ts +108 -0
  711. package/src/utils/OutageUtil/OutageUtil.ts +81 -0
  712. package/src/utils/OutageUtil/index.ts +1 -0
  713. package/src/utils/QueryUtil/QueryUtil.test.ts +42 -0
  714. package/src/utils/QueryUtil/QueryUtil.ts +105 -0
  715. package/src/utils/QueryUtil/index.ts +1 -0
  716. package/src/utils/StringUtil/StringUtil.test.ts +61 -0
  717. package/src/utils/StringUtil/StringUtil.ts +91 -0
  718. package/src/utils/StringUtil/index.ts +1 -0
  719. package/src/utils/TableUtil/TableUtil.ts +665 -0
  720. package/src/utils/TableUtil/index.ts +1 -0
  721. package/src/utils/TestIdUtil/TestIdUtil.test.ts +12 -0
  722. package/src/utils/TestIdUtil/TestIdUtil.ts +13 -0
  723. package/src/utils/TestIdUtil/index.ts +1 -0
  724. package/src/utils/TimeUtil/TimeUtil.ts +38 -0
  725. package/src/utils/TimeUtil/index.ts +1 -0
  726. package/src/utils/UserManagerUtil/UserManagerUtil.test.ts +41 -0
  727. package/src/utils/UserManagerUtil/UserManagerUtil.ts +39 -0
  728. package/src/utils/UserManagerUtil/index.ts +1 -0
  729. package/src/utils/ValidationUtil/ValidationUtil.test.ts +61 -0
  730. package/src/utils/ValidationUtil/ValidationUtil.ts +56 -0
  731. package/src/utils/ValidationUtil/index.ts +1 -0
  732. package/dist/environment.d.ts +0 -54
  733. package/dist/index.d.ts +0 -16074
  734. /package/{dist → src/@types}/mui.d.ts +0 -0
  735. /package/{dist → src/@types}/ui.d.ts +0 -0
  736. /package/{dist → src/@types}/vite-env.d.ts +0 -0
  737. /package/{dist → src/@types}/yup.d.ts +0 -0
  738. /package/{dist → src}/locale/en.json +0 -0
  739. /package/{dist → src}/locale/nl.json +0 -0
@@ -0,0 +1,400 @@
1
+ import {
2
+ useCallback,
3
+ useMemo,
4
+ useRef,
5
+ } from 'react';
6
+ import { useTranslation } from 'react-i18next';
7
+ import {
8
+ array,
9
+ number,
10
+ object,
11
+ string,
12
+ } from 'yup';
13
+ import { isValid } from 'date-fns';
14
+ import { useParams } from 'react-router-dom';
15
+ import type { UseFormReturn } from 'react-hook-form';
16
+
17
+ import type { Col } from '../../api';
18
+ import {
19
+ CaseApi,
20
+ ColType,
21
+ CommandName,
22
+ } from '../../api';
23
+ import {
24
+ useColMapQuery,
25
+ useColOptionsQuery,
26
+ } from '../../dataHooks/useColsQuery';
27
+ import {
28
+ useCaseTypeMapQuery,
29
+ useCaseTypeOptionsQuery,
30
+ } from '../../dataHooks/useCaseTypesQuery';
31
+ import {
32
+ useRefColMapQuery,
33
+ useRefColOptionsQuery,
34
+ } from '../../dataHooks/useRefColsQuery';
35
+ import { useTreeAlgorithmCodeOptionsQuery } from '../../dataHooks/useTreeAlgorithmCodesQuery';
36
+ import { useArray } from '../../hooks/useArray';
37
+ import type {
38
+ FormFieldDefinition,
39
+ OptionBase,
40
+ } from '../../models/form';
41
+ import { FORM_FIELD_DEFINITION_TYPE } from '../../models/form';
42
+ import { QUERY_KEY } from '../../models/query';
43
+ import type { TableColumn } from '../../models/table';
44
+ import { TableUtil } from '../../utils/TableUtil';
45
+ import { TestIdUtil } from '../../utils/TestIdUtil';
46
+ import { CrudPage } from '../CrudPage';
47
+ import { DATE_FORMAT } from '../../data/date';
48
+ import {
49
+ useDimMapQuery,
50
+ useDimOptionsQuery,
51
+ } from '../../dataHooks/useDimsQuery';
52
+ import { useRefColsValidationRulesQuery } from '../../dataHooks/useRefColsValidationRulesQuery';
53
+ import { useRefDimMapQuery } from '../../dataHooks/useRefDimsQuery';
54
+ import { DataUtil } from '../../utils/DataUtil';
55
+ import { NumberUtil } from '../../utils/NumberUtil';
56
+
57
+ type FormFields = Pick<Col, 'case_type_id' | 'ref_col_id' | 'dim_id' | 'code' | 'rank' | 'label' | 'description' | 'min_value' | 'max_value' | 'min_datetime' | 'max_datetime' | 'min_length' | 'genetic_sequence_col_id' | 'tree_algorithm_codes' | 'pattern'>;
58
+
59
+ export const ColsAdminPage = () => {
60
+ const { t } = useTranslation();
61
+ const { caseTypeId, dimId } = useParams();
62
+ const refColOptionsQuery = useRefColOptionsQuery();
63
+ const refColMapQuery = useRefColMapQuery();
64
+ const refDimMapQuery = useRefDimMapQuery();
65
+ const treeAlgorithmCodesOptionsQuery = useTreeAlgorithmCodeOptionsQuery();
66
+ const caseTypeOptionsQuery = useCaseTypeOptionsQuery();
67
+ const colOptionsQuery = useColOptionsQuery();
68
+ const colMapQuery = useColMapQuery();
69
+ const caseTypeMapQuery = useCaseTypeMapQuery();
70
+ const dimMapQuery = useDimMapQuery();
71
+ const dimOptionsQuery = useDimOptionsQuery();
72
+ const colsValidationRulesQuery = useRefColsValidationRulesQuery();
73
+ const loadables = useArray([refDimMapQuery, refColMapQuery, colsValidationRulesQuery, dimOptionsQuery, dimMapQuery, caseTypeMapQuery, caseTypeOptionsQuery, refColOptionsQuery, treeAlgorithmCodesOptionsQuery, colOptionsQuery]);
74
+ const dimOptionsByCaseTypeIdCache = useRef(new Map<string, OptionBase<string>[]>());
75
+ const refColOptionsByDimIdCache = useRef(new Map<string, OptionBase<string>[]>());
76
+ const geneticSequenceColOptionsByCaseTypeIdCache = useRef(new Map<string, OptionBase<string>[]>());
77
+
78
+ const normalizedCaseTypeId = useMemo(() => {
79
+ if (dimId) {
80
+ return dimMapQuery.map.get(dimId)?.case_type_id ?? null;
81
+ }
82
+ if (caseTypeId) {
83
+ return caseTypeId;
84
+ }
85
+ return null;
86
+ }, [dimId, dimMapQuery.map, caseTypeId]);
87
+
88
+ const fetchAll = useCallback(async (signal: AbortSignal) => {
89
+ return (await CaseApi.instance.colsGetAll({ signal }))?.data;
90
+ }, []);
91
+
92
+ const fetchAllSelect = useCallback((cols: Col[]) => {
93
+ if (dimId) {
94
+ return cols.filter((col) => col.dim_id === dimId);
95
+ }
96
+ return cols;
97
+ }, [dimId]);
98
+
99
+ const deleteOne = useCallback(async (item: Col) => {
100
+ return await CaseApi.instance.colsDeleteOne(item.id);
101
+ }, []);
102
+
103
+ const updateOne = useCallback(async (variables: FormFields, item: Col) => {
104
+ return (await CaseApi.instance.colsPutOne(item.id, { id: item.id, ...variables })).data;
105
+ }, []);
106
+
107
+ const createOne = useCallback(async (variables: FormFields) => {
108
+ return (await CaseApi.instance.colsPostOne(variables)).data;
109
+ }, []);
110
+
111
+ const getName = useCallback((item: Col) => {
112
+ return item.label;
113
+ }, []);
114
+
115
+ const getDimOptionsForCaseTypeId = useCallback((id: string): OptionBase<string>[] => {
116
+ if (dimOptionsByCaseTypeIdCache.current.has(id)) {
117
+ return dimOptionsByCaseTypeIdCache.current.get(id);
118
+ }
119
+ const options = DataUtil.getDimOptionsForCaseTypeId({
120
+ caseTypeId: id,
121
+ dimOptions: dimOptionsQuery.options,
122
+ dimMap: dimMapQuery.map,
123
+ });
124
+ dimOptionsByCaseTypeIdCache.current.set(id, options);
125
+ return options;
126
+ }, [dimMapQuery.map, dimOptionsQuery.options]);
127
+
128
+ const getRefColOptionsForDimId = useCallback((id: string): OptionBase<string>[] => {
129
+ if (refColOptionsByDimIdCache.current.has(id)) {
130
+ return refColOptionsByDimIdCache.current.get(id);
131
+ }
132
+ const options = DataUtil.getRefColOptionsForDimId({
133
+ dimId: id,
134
+ dimMap: dimMapQuery.map,
135
+ refDimMap: refDimMapQuery.map,
136
+ refColOptions: refColOptionsQuery.options,
137
+ refColMap: refColMapQuery.map,
138
+ colsValidationRules: colsValidationRulesQuery.data?.valid_col_types_by_dim_type ?? {},
139
+ });
140
+ refColOptionsByDimIdCache.current.set(id, options);
141
+ return options;
142
+ }, [dimMapQuery.map, refColMapQuery.map, refColOptionsQuery.options, colsValidationRulesQuery.data?.valid_col_types_by_dim_type, refDimMapQuery.map]);
143
+
144
+ const getGeneticSequenceColOptionsForCaseTypeId = useCallback((id: string): OptionBase<string>[] => {
145
+ if (geneticSequenceColOptionsByCaseTypeIdCache.current.has(id)) {
146
+ return geneticSequenceColOptionsByCaseTypeIdCache.current.get(id);
147
+ }
148
+ const options = DataUtil.getGeneticSequenceColOptionsForCaseTypeId({
149
+ caseTypeId: id,
150
+ refColMap: refColMapQuery.map,
151
+ colMap: colMapQuery.map,
152
+ colOptions: colOptionsQuery.options,
153
+ });
154
+ geneticSequenceColOptionsByCaseTypeIdCache.current.set(id, options);
155
+ return options;
156
+ }, [refColMapQuery.map, colMapQuery.map, colOptionsQuery.options]);
157
+
158
+ const schema = useMemo(() => {
159
+ return object<FormFields>().shape({
160
+ label: string().extendedAlphaNumeric().required().max(100),
161
+ code: string().code().required().max(100),
162
+ rank: NumberUtil.yup.required().min(0).integer(),
163
+ ref_col_id: string().uuid4().required().max(100),
164
+ dim_id: string().uuid4().required().max(100),
165
+ case_type_id: string().uuid4().required().max(100),
166
+ description: string().freeFormText().required().max(100),
167
+ min_value: number().integer().positive().max(10000).optional().transform((_val: unknown, orig: string | number) => orig === '' ? undefined : orig),
168
+ max_value: number().integer().positive().max(10000).optional().transform((_val: unknown, orig: string | number) => orig === '' ? undefined : orig),
169
+ min_datetime: string().transform((_val: unknown, orig: Date) => isValid(orig) ? orig.toISOString() : undefined),
170
+ max_datetime: string().transform((_val: unknown, orig: Date) => isValid(orig) ? orig.toISOString() : undefined),
171
+ min_length: number().integer().positive().max(10000).optional().transform((_val: unknown, orig: string | number) => orig === '' ? undefined : orig),
172
+ max_length: number().integer().positive().max(10000).optional().transform((_val: unknown, orig: string | number) => orig === '' ? undefined : orig),
173
+ genetic_sequence_col_id: string().when('ref_col_id', {
174
+ is: (ref_col_id: string) => refColMapQuery.map.get(ref_col_id)?.col_type === ColType.GENETIC_DISTANCE,
175
+ then: () => string().uuid4().required(),
176
+ otherwise: () => string().nullable().notRequired(),
177
+ }),
178
+ tree_algorithm_codes: array().when('ref_col_id', {
179
+ is: (ref_col_id: string) => refColMapQuery.map.get(ref_col_id)?.col_type === ColType.GENETIC_DISTANCE,
180
+ then: () => array().min(1).required(),
181
+ otherwise: () => array().nullable().notRequired(),
182
+ }),
183
+ pattern: string().regex(),
184
+ });
185
+ }, [refColMapQuery.map]);
186
+
187
+ const onFormChange = useCallback((_item: Col, values: FormFields, formMethods: UseFormReturn<FormFields>) => {
188
+ if (values.case_type_id && values.dim_id) {
189
+ const validDimOptions = getDimOptionsForCaseTypeId(values.case_type_id);
190
+ if (!validDimOptions.find(option => option.value === values.dim_id)) {
191
+ formMethods.setValue('dim_id', validDimOptions.length === 1 ? validDimOptions[0].value : null);
192
+ formMethods.setValue('ref_col_id', null);
193
+ }
194
+ }
195
+
196
+ if (values.dim_id && values.ref_col_id) {
197
+ const validColOptions = getRefColOptionsForDimId(values.dim_id);
198
+ if (!validColOptions.find(option => option.value === values.ref_col_id)) {
199
+ formMethods.setValue('ref_col_id', validColOptions.length === 1 ? validColOptions[0].value : null);
200
+ }
201
+ }
202
+
203
+ if (values.case_type_id && values.genetic_sequence_col_id) {
204
+ const validColOptions = getGeneticSequenceColOptionsForCaseTypeId(values.case_type_id);
205
+ if (!validColOptions.find(option => option.value === values.genetic_sequence_col_id)) {
206
+ formMethods.setValue('genetic_sequence_col_id', validColOptions.length === 1 ? validColOptions[0].value : null);
207
+ }
208
+ }
209
+ }, [getDimOptionsForCaseTypeId, getRefColOptionsForDimId, getGeneticSequenceColOptionsForCaseTypeId]);
210
+
211
+ const formFieldDefinitions = useCallback((item: Col, values: FormFields): FormFieldDefinition<FormFields>[] => {
212
+ const normalizedDimId = values?.dim_id ?? item?.dim_id ?? null;
213
+ const caseTypeIdFromDimId = dimMapQuery.map.get(normalizedDimId)?.case_type_id ?? null;
214
+ const normalizedCaseTypeIdWithValues = values?.case_type_id ?? normalizedCaseTypeId ?? caseTypeIdFromDimId;
215
+
216
+ const dimOptions = getDimOptionsForCaseTypeId(normalizedCaseTypeIdWithValues);
217
+ const refColOptions = getRefColOptionsForDimId(normalizedDimId);
218
+ const geneticSequenceColOptions = getGeneticSequenceColOptionsForCaseTypeId(normalizedCaseTypeIdWithValues);
219
+
220
+ return [
221
+ {
222
+ definition: FORM_FIELD_DEFINITION_TYPE.AUTOCOMPLETE,
223
+ name: 'case_type_id',
224
+ label: t`Case type`,
225
+ options: caseTypeOptionsQuery.options,
226
+ disabled: !!item,
227
+ } as const satisfies FormFieldDefinition<FormFields>,
228
+ {
229
+ definition: FORM_FIELD_DEFINITION_TYPE.AUTOCOMPLETE,
230
+ name: 'dim_id',
231
+ label: t`Dimension`,
232
+ options: dimOptions,
233
+ disabled: !!item,
234
+ } as const satisfies FormFieldDefinition<FormFields>,
235
+ {
236
+ definition: FORM_FIELD_DEFINITION_TYPE.AUTOCOMPLETE,
237
+ name: 'ref_col_id',
238
+ label: t`Reference column`,
239
+ options: refColOptions,
240
+ disabled: !!item,
241
+ } as const satisfies FormFieldDefinition<FormFields>,
242
+ {
243
+ definition: FORM_FIELD_DEFINITION_TYPE.TEXTFIELD,
244
+ name: 'code',
245
+ label: t`Code`,
246
+ } as const satisfies FormFieldDefinition<FormFields>,
247
+ {
248
+ definition: FORM_FIELD_DEFINITION_TYPE.TEXTFIELD,
249
+ name: 'label',
250
+ label: t`Label`,
251
+ } as const satisfies FormFieldDefinition<FormFields>,
252
+ {
253
+ definition: FORM_FIELD_DEFINITION_TYPE.TEXTFIELD,
254
+ name: 'description',
255
+ label: t`Description`,
256
+ multiline: true,
257
+ rows: 5,
258
+ } as const satisfies FormFieldDefinition<FormFields>,
259
+ {
260
+ definition: FORM_FIELD_DEFINITION_TYPE.TEXTFIELD,
261
+ name: 'min_value',
262
+ label: t`Min value`,
263
+ type: 'number',
264
+ } as const satisfies FormFieldDefinition<FormFields>,
265
+ {
266
+ definition: FORM_FIELD_DEFINITION_TYPE.TEXTFIELD,
267
+ name: 'max_value',
268
+ label: t`Max value`,
269
+ type: 'number',
270
+ } as const satisfies FormFieldDefinition<FormFields>,
271
+ {
272
+ definition: FORM_FIELD_DEFINITION_TYPE.DATE,
273
+ name: 'min_datetime',
274
+ label: t`Min datetime`,
275
+ dateFormat: DATE_FORMAT.DATE_TIME,
276
+ } as const satisfies FormFieldDefinition<FormFields>,
277
+ {
278
+ definition: FORM_FIELD_DEFINITION_TYPE.DATE,
279
+ name: 'max_datetime',
280
+ label: t`Max datetime`,
281
+ dateFormat: DATE_FORMAT.DATE_TIME,
282
+ } as const satisfies FormFieldDefinition<FormFields>,
283
+ {
284
+ definition: FORM_FIELD_DEFINITION_TYPE.TEXTFIELD,
285
+ name: 'min_length',
286
+ label: t`Min length`,
287
+ type: 'number',
288
+ } as const satisfies FormFieldDefinition<FormFields>,
289
+ {
290
+ definition: FORM_FIELD_DEFINITION_TYPE.SELECT,
291
+ name: 'genetic_sequence_col_id',
292
+ label: t`Genetic sequence column`,
293
+ options: geneticSequenceColOptions,
294
+ } as const satisfies FormFieldDefinition<FormFields>,
295
+ {
296
+ definition: FORM_FIELD_DEFINITION_TYPE.SELECT,
297
+ name: 'tree_algorithm_codes',
298
+ label: t`Tree algorithm codes`,
299
+ options: treeAlgorithmCodesOptionsQuery.options,
300
+ multiple: true,
301
+ } as const satisfies FormFieldDefinition<FormFields>,
302
+ {
303
+ definition: FORM_FIELD_DEFINITION_TYPE.TEXTFIELD,
304
+ name: 'rank',
305
+ label: t`Rank`,
306
+ type: 'number',
307
+ } as const satisfies FormFieldDefinition<FormFields>,
308
+ {
309
+ definition: FORM_FIELD_DEFINITION_TYPE.TEXTFIELD,
310
+ name: 'pattern',
311
+ label: t`Pattern`,
312
+ type: 'text',
313
+ } as const satisfies FormFieldDefinition<FormFields>,
314
+ ] as const satisfies FormFieldDefinition<FormFields>[];
315
+ }, [dimMapQuery.map, caseTypeOptionsQuery.options, getDimOptionsForCaseTypeId, getRefColOptionsForDimId, getGeneticSequenceColOptionsForCaseTypeId, normalizedCaseTypeId, t, treeAlgorithmCodesOptionsQuery.options]);
316
+
317
+ const tableColumns = useMemo((): TableColumn<Col>[] => {
318
+ const columns: TableColumn<Col>[] = [];
319
+ if (!caseTypeId) {
320
+ columns.push(TableUtil.createOptionsColumn<Col>({ id: 'case_type_id', name: t`Case type`, options: caseTypeOptionsQuery.options }));
321
+ }
322
+ if (!dimId) {
323
+ columns.push(TableUtil.createOptionsColumn<Col>({ id: 'dim_id', name: t`Dimension`, options: dimOptionsQuery.options }));
324
+ }
325
+
326
+ columns.push(
327
+ TableUtil.createOptionsColumn<Col>({ id: 'ref_col_id', name: t`Column`, options: refColOptionsQuery.options }),
328
+ TableUtil.createTextColumn<Col>({ id: 'code', name: t`Code` }),
329
+ TableUtil.createNumberColumn<Col>({ id: 'rank', name: t`Rank` }),
330
+ );
331
+ return columns;
332
+ }, [dimId, dimOptionsQuery.options, caseTypeId, caseTypeOptionsQuery.options, refColOptionsQuery.options, t]);
333
+
334
+ const getOptimisticUpdateIntermediateItem = useCallback((variables: FormFields, previousItem: Col): Col => {
335
+ return {
336
+ id: previousItem.id,
337
+ case_type_id: previousItem.case_type_id,
338
+ dim_id: previousItem.dim_id,
339
+ ...variables,
340
+ };
341
+ }, []);
342
+
343
+ const defaultNewItem = useMemo<Partial<FormFields>>(() => {
344
+ return {
345
+ dim_id: dimId ?? null,
346
+ case_type_id: normalizedCaseTypeId,
347
+ };
348
+ }, [dimId, normalizedCaseTypeId]);
349
+
350
+ const title = useMemo(() => {
351
+ const parts: string[] = [];
352
+
353
+ if (caseTypeId && caseTypeMapQuery.map.has(caseTypeId)) {
354
+ parts.push(caseTypeMapQuery.map.get(caseTypeId)?.name);
355
+ }
356
+ if (dimId && dimMapQuery.map.has(dimId)) {
357
+ parts.push(dimMapQuery.map.get(dimId)?.label);
358
+ }
359
+ parts.push(t`Columns`);
360
+
361
+ return parts;
362
+ }, [caseTypeId, dimId, caseTypeMapQuery.map, dimMapQuery.map, t]);
363
+
364
+ const tableStoreStorageNamePostFix = useMemo(() => {
365
+ const parts: string[] = [];
366
+ if (caseTypeId) {
367
+ parts.push('CaseType');
368
+ }
369
+ if (dimId) {
370
+ parts.push('Dim');
371
+ }
372
+ return parts.join('_');
373
+ }, [dimId, caseTypeId]);
374
+
375
+ return (
376
+ <CrudPage<FormFields, Col>
377
+ createItemDialogTitle={t`Create new column`}
378
+ createOne={createOne}
379
+ crudCommandType={CommandName.ColCrudCommand}
380
+ defaultNewItem={defaultNewItem}
381
+ defaultSortByField={(dimId ?? caseTypeId) ? 'rank' : 'case_type_id'}
382
+ defaultSortDirection={'asc'}
383
+ deleteOne={deleteOne}
384
+ fetchAll={fetchAll}
385
+ fetchAllSelect={fetchAllSelect}
386
+ formFieldDefinitions={formFieldDefinitions}
387
+ getName={getName}
388
+ getOptimisticUpdateIntermediateItem={getOptimisticUpdateIntermediateItem}
389
+ loadables={loadables}
390
+ resourceQueryKeyBase={QUERY_KEY.COLS}
391
+ schema={schema}
392
+ tableColumns={tableColumns}
393
+ tableStoreStorageNamePostFix={tableStoreStorageNamePostFix}
394
+ testIdAttributes={TestIdUtil.createAttributes('ColsAdminPage')}
395
+ title={title}
396
+ updateOne={updateOne}
397
+ onFormChange={onFormChange}
398
+ />
399
+ );
400
+ };
@@ -0,0 +1 @@
1
+ export * from './ColsAdminPage';
@@ -0,0 +1,134 @@
1
+ import {
2
+ useCallback,
3
+ useMemo,
4
+ } from 'react';
5
+ import { useTranslation } from 'react-i18next';
6
+ import {
7
+ mixed,
8
+ object,
9
+ string,
10
+ } from 'yup';
11
+
12
+ import type { ConceptRelation } from '../../api';
13
+ import {
14
+ OntologyApi,
15
+ CommandName,
16
+ ConceptRelationType,
17
+ } from '../../api';
18
+ import type { FormFieldDefinition } from '../../models/form';
19
+ import { FORM_FIELD_DEFINITION_TYPE } from '../../models/form';
20
+ import { QUERY_KEY } from '../../models/query';
21
+ import type { TableColumn } from '../../models/table';
22
+ import { TableUtil } from '../../utils/TableUtil';
23
+ import { TestIdUtil } from '../../utils/TestIdUtil';
24
+ import { CrudPage } from '../CrudPage';
25
+ import {
26
+ useConceptMapQuery,
27
+ useConceptNameFactory,
28
+ useConceptOptionsQuery,
29
+ } from '../../dataHooks/useConceptQuery';
30
+ import { useArray } from '../../hooks/useArray';
31
+ import { useConceptRelationTypeOptionsQuery } from '../../dataHooks/useConceptRelationTypeQuery';
32
+
33
+
34
+ type FormFields = Omit<ConceptRelation, 'id' | 'from_concept' | 'to_concept'>;
35
+
36
+ export const ConceptRelationsAdminPage = () => {
37
+ const { t } = useTranslation();
38
+
39
+ const conceptMapQuery = useConceptMapQuery();
40
+ const conceptOptionsQuery = useConceptOptionsQuery();
41
+ const conceptRelationTypeOptionsQuery = useConceptRelationTypeOptionsQuery();
42
+ const nameFactory = useConceptNameFactory();
43
+
44
+ const loadables = useArray([conceptOptionsQuery, conceptMapQuery, conceptRelationTypeOptionsQuery, nameFactory]);
45
+
46
+ const fetchAll = useCallback(async (signal: AbortSignal) => {
47
+ return (await OntologyApi.instance.conceptRelationsGetAll({ signal }))?.data;
48
+ }, []);
49
+
50
+ const deleteOne = useCallback(async (item: ConceptRelation) => {
51
+ return await OntologyApi.instance.conceptRelationsDeleteOne(item.id);
52
+ }, []);
53
+
54
+ const updateOne = useCallback(async (variables: FormFields, item: ConceptRelation) => {
55
+ return (await OntologyApi.instance.conceptRelationsPutOne(item.id, { id: item.id, ...variables })).data;
56
+ }, []);
57
+
58
+ const createOne = useCallback(async (variables: FormFields) => {
59
+ return (await OntologyApi.instance.conceptRelationsPostOne(variables)).data;
60
+ }, []);
61
+
62
+ const getName = useCallback((item: ConceptRelation) => {
63
+ const fromConcept = conceptMapQuery.map.get(item.from_concept_id);
64
+ const toConcept = conceptMapQuery.map.get(item.to_concept_id);
65
+ if (fromConcept && toConcept) {
66
+ return `${fromConcept.name} -> ${toConcept.name}`;
67
+ }
68
+ return `${item.from_concept_id} -> ${item.to_concept_id}`;
69
+ }, [conceptMapQuery.map]);
70
+
71
+ const schema = useMemo(() => {
72
+ return object<FormFields>().shape({
73
+ from_concept_id: string().uuid4().required(),
74
+ to_concept_id: string().uuid4().required(),
75
+ relation: mixed<ConceptRelationType>().required().oneOf(Object.values(ConceptRelationType)),
76
+ });
77
+ }, []);
78
+
79
+ const formFieldDefinitions = useMemo<FormFieldDefinition<FormFields>[]>(() => {
80
+ return [
81
+ {
82
+ definition: FORM_FIELD_DEFINITION_TYPE.AUTOCOMPLETE,
83
+ name: 'from_concept_id',
84
+ label: t`From Concept`,
85
+ options: conceptOptionsQuery.options,
86
+ loading: conceptOptionsQuery.isLoading,
87
+ } as const satisfies FormFieldDefinition<FormFields>,
88
+ {
89
+ definition: FORM_FIELD_DEFINITION_TYPE.AUTOCOMPLETE,
90
+ name: 'to_concept_id',
91
+ label: t`To Concept`,
92
+ options: conceptOptionsQuery.options,
93
+ loading: conceptOptionsQuery.isLoading,
94
+ } as const satisfies FormFieldDefinition<FormFields>,
95
+ {
96
+ definition: FORM_FIELD_DEFINITION_TYPE.AUTOCOMPLETE,
97
+ name: 'relation',
98
+ label: t`Relation`,
99
+ options: conceptRelationTypeOptionsQuery.options,
100
+ loading: conceptRelationTypeOptionsQuery.isLoading,
101
+ } as const satisfies FormFieldDefinition<FormFields>,
102
+ ] as const;
103
+ }, [conceptOptionsQuery.isLoading, conceptOptionsQuery.options, conceptRelationTypeOptionsQuery.isLoading, conceptRelationTypeOptionsQuery.options, t]);
104
+
105
+ const tableColumns = useMemo((): TableColumn<ConceptRelation>[] => {
106
+ return [
107
+ TableUtil.createOptionsColumn<ConceptRelation>({ id: 'from_concept_id', name: t`From Concept`, options: conceptOptionsQuery.options }),
108
+ TableUtil.createOptionsColumn<ConceptRelation>({ id: 'to_concept_id', name: t`To Concept`, options: conceptOptionsQuery.options }),
109
+ TableUtil.createOptionsColumn<ConceptRelation>({ id: 'relation', name: t`Relation`, options: conceptRelationTypeOptionsQuery.options }),
110
+ ];
111
+ }, [conceptOptionsQuery.options, conceptRelationTypeOptionsQuery.options, t]);
112
+
113
+
114
+ return (
115
+ <CrudPage<FormFields, ConceptRelation>
116
+ createOne={createOne}
117
+ crudCommandType={CommandName.ConceptRelationCrudCommand}
118
+ createItemDialogTitle={t`Create new concept relation`}
119
+ defaultSortByField={'from_concept_id'}
120
+ loadables={loadables}
121
+ defaultSortDirection={'asc'}
122
+ deleteOne={deleteOne}
123
+ fetchAll={fetchAll}
124
+ formFieldDefinitions={formFieldDefinitions}
125
+ getName={getName}
126
+ resourceQueryKeyBase={QUERY_KEY.CONCEPT_RELATIONS}
127
+ schema={schema}
128
+ tableColumns={tableColumns}
129
+ testIdAttributes={TestIdUtil.createAttributes('ConceptRelationsAdminPage')}
130
+ title={t`Concept Relations`}
131
+ updateOne={updateOne}
132
+ />
133
+ );
134
+ };
@@ -0,0 +1 @@
1
+ export * from './ConceptRelationsAdminPage';