@gen-epix/ui 1.14.4 → 1.15.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (739) hide show
  1. package/README.md +3 -3
  2. package/dist/index.js +27287 -27948
  3. package/package.json +94 -84
  4. package/src/@types/environment.d.ts +54 -0
  5. package/src/api/api.ts +43576 -0
  6. package/src/api/base.ts +111 -0
  7. package/src/api/common.ts +168 -0
  8. package/src/api/configuration.ts +118 -0
  9. package/src/api/index.ts +20 -0
  10. package/src/assets/icons/CollectionIcon.svg +1 -0
  11. package/src/assets/icons/DnaIcon.svg +1 -0
  12. package/src/assets/icons/VirusIcon.svg +1 -0
  13. package/src/assets/logo/logo-rijksoverheid.svg +42 -0
  14. package/src/assets/logo/logo-rivm.svg +6 -0
  15. package/src/classes/Subject/Subject.ts +26 -0
  16. package/src/classes/Subject/index.ts +1 -0
  17. package/src/classes/TableEventBus/TableEventBus.ts +14 -0
  18. package/src/classes/TableEventBus/index.ts +1 -0
  19. package/src/classes/abstracts/EventBusAbstract/EventBusAbstract.ts +37 -0
  20. package/src/classes/abstracts/EventBusAbstract/index.ts +1 -0
  21. package/src/classes/abstracts/FilterAbstract/FilterAbstract.ts +54 -0
  22. package/src/classes/abstracts/FilterAbstract/index.ts +1 -0
  23. package/src/classes/abstracts/SubscribableAbstract/SubscribableAbstract.ts +20 -0
  24. package/src/classes/abstracts/SubscribableAbstract/index.ts +1 -0
  25. package/src/classes/errors/UploadError.ts +11 -0
  26. package/src/classes/errors/index.ts +1 -0
  27. package/src/classes/filters/BooleanFilter.ts +31 -0
  28. package/src/classes/filters/DateFilter.ts +133 -0
  29. package/src/classes/filters/GeoFilter.ts +60 -0
  30. package/src/classes/filters/MultiSelectFilter.ts +70 -0
  31. package/src/classes/filters/NumberRangeFilter.ts +82 -0
  32. package/src/classes/filters/SelectionFilter.ts +25 -0
  33. package/src/classes/filters/TextFilter.ts +36 -0
  34. package/src/classes/filters/TreeFilter.ts +22 -0
  35. package/src/classes/managers/AuthenticationManager/AuthenticationManager.ts +94 -0
  36. package/src/classes/managers/AuthenticationManager/index.ts +1 -0
  37. package/src/classes/managers/AuthorizationManager/AuthorizationManager.ts +70 -0
  38. package/src/classes/managers/AuthorizationManager/index.ts +1 -0
  39. package/src/classes/managers/BackendVersionManager/BackendVersionManager.ts +23 -0
  40. package/src/classes/managers/BackendVersionManager/index.ts +1 -0
  41. package/src/classes/managers/BreadcrumbManager/BreadcrumbManager.ts +30 -0
  42. package/src/classes/managers/BreadcrumbManager/index.ts +1 -0
  43. package/src/classes/managers/ConfigManager/ConfigManager.ts +31 -0
  44. package/src/classes/managers/ConfigManager/index.ts +1 -0
  45. package/src/classes/managers/DevicePixelRatioManager/DevicePixelRatioManager.ts +27 -0
  46. package/src/classes/managers/DevicePixelRatioManager/index.ts +1 -0
  47. package/src/classes/managers/EmotionCacheManager/EmotionCacheManager.ts +27 -0
  48. package/src/classes/managers/EmotionCacheManager/index.ts +1 -0
  49. package/src/classes/managers/EpiDataManager/EpiDataManager.ts +196 -0
  50. package/src/classes/managers/EpiDataManager/index.ts +1 -0
  51. package/src/classes/managers/EpiEventBusManager/EpiEventBusManager.ts +61 -0
  52. package/src/classes/managers/EpiEventBusManager/index.ts +1 -0
  53. package/src/classes/managers/EpiHighlightingManager/EpiHighlightingManager.ts +32 -0
  54. package/src/classes/managers/EpiHighlightingManager/index.ts +1 -0
  55. package/src/classes/managers/EpiLineListCaseSetMembersManager/EpiListsCaseSetMembersManager.ts +118 -0
  56. package/src/classes/managers/EpiLineListCaseSetMembersManager/index.ts +1 -0
  57. package/src/classes/managers/FeatureFlagsManager/FeatureFlagsManager.ts +30 -0
  58. package/src/classes/managers/FeatureFlagsManager/index.ts +1 -0
  59. package/src/classes/managers/I18nManager/I18nManager.ts +105 -0
  60. package/src/classes/managers/I18nManager/index.ts +1 -0
  61. package/src/classes/managers/InactivityManager/InactivityManager.ts +119 -0
  62. package/src/classes/managers/InactivityManager/index.ts +1 -0
  63. package/src/classes/managers/KeyboardShortcutManager/KeyboardShortcutManager.ts +78 -0
  64. package/src/classes/managers/KeyboardShortcutManager/index.ts +1 -0
  65. package/src/classes/managers/LogManager/LogManager.ts +151 -0
  66. package/src/classes/managers/LogManager/index.ts +1 -0
  67. package/src/classes/managers/NavigationHistoryManager/NavigationHistoryManager.ts +16 -0
  68. package/src/classes/managers/NavigationHistoryManager/index.ts +1 -0
  69. package/src/classes/managers/NotificationManager/NotificationManager.ts +104 -0
  70. package/src/classes/managers/NotificationManager/index.ts +1 -0
  71. package/src/classes/managers/PageEventBusManager/PageEventBusManager.ts +116 -0
  72. package/src/classes/managers/PageEventBusManager/index.ts +1 -0
  73. package/src/classes/managers/QueryClientManager/QueryClientManager.ts +51 -0
  74. package/src/classes/managers/QueryClientManager/index.ts +1 -0
  75. package/src/classes/managers/RouterManager/RouterManager.ts +25 -0
  76. package/src/classes/managers/RouterManager/index.ts +1 -0
  77. package/src/classes/managers/UserSettingsManager/UserSettingsManager.ts +16 -0
  78. package/src/classes/managers/UserSettingsManager/index.ts +1 -0
  79. package/src/classes/managers/WindowManager/WindowManager.test.ts +23 -0
  80. package/src/classes/managers/WindowManager/WindowManager.ts +26 -0
  81. package/src/classes/managers/WindowManager/index.ts +1 -0
  82. package/src/components/app/App/App.tsx +58 -0
  83. package/src/components/app/App/index.ts +1 -0
  84. package/src/components/app/ApplicationBootstrap/ApplicationBootstrap.tsx +223 -0
  85. package/src/components/app/ApplicationBootstrap/index.ts +1 -0
  86. package/src/components/app/RouterRoot/RouterRoot.tsx +187 -0
  87. package/src/components/app/RouterRoot/index.ts +1 -0
  88. package/src/components/epi/EpiAddCasesToEventDialog/EpiAddCasesToEventDialog.tsx +347 -0
  89. package/src/components/epi/EpiAddCasesToEventDialog/EpiAddCasesToEventDialogSuccessNotificationMessage.tsx +38 -0
  90. package/src/components/epi/EpiAddCasesToEventDialog/index.ts +1 -0
  91. package/src/components/epi/EpiBulkEditCaseDialog/EpiBulkEditCaseDialog.tsx +61 -0
  92. package/src/components/epi/EpiBulkEditCaseDialog/index.ts +1 -0
  93. package/src/components/epi/EpiCaseInfoDialog/EpiCaseCaseSetInfo.tsx +137 -0
  94. package/src/components/epi/EpiCaseInfoDialog/EpiCaseContent.tsx +127 -0
  95. package/src/components/epi/EpiCaseInfoDialog/EpiCaseForm.tsx +111 -0
  96. package/src/components/epi/EpiCaseInfoDialog/EpiCaseInfoDialog.tsx +377 -0
  97. package/src/components/epi/EpiCaseInfoDialog/EpiCaseSharingForm.tsx +140 -0
  98. package/src/components/epi/EpiCaseInfoDialog/EpiCaseSharingInfo.tsx +23 -0
  99. package/src/components/epi/EpiCaseInfoDialog/EpiReadOnlyCaseContent.tsx +89 -0
  100. package/src/components/epi/EpiCaseInfoDialog/index.ts +1 -0
  101. package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetContent.tsx +108 -0
  102. package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetDescription.tsx +34 -0
  103. package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetForm.tsx +151 -0
  104. package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetInfoDialog.tsx +389 -0
  105. package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetSharingForm.tsx +155 -0
  106. package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetSharingInfo.tsx +23 -0
  107. package/src/components/epi/EpiCaseSetInfoDialog/index.ts +1 -0
  108. package/src/components/epi/EpiCaseSummary/EpiCaseSummary.tsx +141 -0
  109. package/src/components/epi/EpiCaseSummary/index.ts +1 -0
  110. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoAccessRights.tsx +91 -0
  111. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoColAccessRights.tsx +118 -0
  112. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoData.tsx +38 -0
  113. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoDialog.tsx +39 -0
  114. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoDialogContent.tsx +169 -0
  115. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoDialogWithLoader.tsx +42 -0
  116. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoRegions.tsx +87 -0
  117. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoTrees.tsx +73 -0
  118. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoValues.tsx +61 -0
  119. package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoVariableDetails.tsx +151 -0
  120. package/src/components/epi/EpiCaseTypeInfoDialog/index.ts +10 -0
  121. package/src/components/epi/EpiCasesAlreadyInCaseSetWarning/EpiCasesAlreadyInCaseSetWarning.tsx +190 -0
  122. package/src/components/epi/EpiCasesAlreadyInCaseSetWarning/EpiCasesAlreadyInCaseSetWarningCaseSetLink.tsx +62 -0
  123. package/src/components/epi/EpiCasesAlreadyInCaseSetWarning/index.ts +1 -0
  124. package/src/components/epi/EpiCompletCaseTypeLoader/EpiCompletCaseTypeLoader.tsx +87 -0
  125. package/src/components/epi/EpiCompletCaseTypeLoader/index.ts +1 -0
  126. package/src/components/epi/EpiContactDetailsDialog/EpiContactDetailsDialog.tsx +151 -0
  127. package/src/components/epi/EpiContactDetailsDialog/index.ts +1 -0
  128. package/src/components/epi/EpiContextMenu/EpiContextMenu.tsx +155 -0
  129. package/src/components/epi/EpiContextMenu/index.ts +1 -0
  130. package/src/components/epi/EpiCreateEventDialog/EpiCreateEventDialog.tsx +386 -0
  131. package/src/components/epi/EpiCreateEventDialog/EpiCreateEventDialogSuccessNotificationMessage.tsx +30 -0
  132. package/src/components/epi/EpiCreateEventDialog/index.ts +1 -0
  133. package/src/components/epi/EpiCurve/EpiCurve.tsx +525 -0
  134. package/src/components/epi/EpiCurve/index.ts +1 -0
  135. package/src/components/epi/EpiCustomTabPanel/EpiCustomTabPanel.tsx +27 -0
  136. package/src/components/epi/EpiCustomTabPanel/index.ts +1 -0
  137. package/src/components/epi/EpiDashboard/EpiDashboard.tsx +390 -0
  138. package/src/components/epi/EpiDashboard/EpiDashboardDownloadSidebarItem.tsx +154 -0
  139. package/src/components/epi/EpiDashboard/EpiDashboardGeneralSettingsForm.tsx +89 -0
  140. package/src/components/epi/EpiDashboard/EpiDashboardLayoutRenderer.tsx +248 -0
  141. package/src/components/epi/EpiDashboard/EpiDashboardLayoutSettingsForm.tsx +160 -0
  142. package/src/components/epi/EpiDashboard/EpiDashboardSettingsSidebarItem.tsx +93 -0
  143. package/src/components/epi/EpiDashboard/EpiDashboardTreeSettingsForm.tsx +90 -0
  144. package/src/components/epi/EpiDashboard/index.ts +1 -0
  145. package/src/components/epi/EpiDashboardStoreLoader/EpiDashboardStoreLoader.tsx +34 -0
  146. package/src/components/epi/EpiDashboardStoreLoader/EpiDashboardStoreLoaderContent.tsx +73 -0
  147. package/src/components/epi/EpiDashboardStoreLoader/index.ts +2 -0
  148. package/src/components/epi/EpiDashboardStoreLoader/withEpiDashboardStore.tsx +19 -0
  149. package/src/components/epi/EpiDataCollectionAccessInfo/EpiDataCollectionAccessInfo.tsx +88 -0
  150. package/src/components/epi/EpiDataCollectionAccessInfo/index.ts +1 -0
  151. package/src/components/epi/EpiFindSimilarCasesDialog/EpiFindSimilarCasesDialog.tsx +302 -0
  152. package/src/components/epi/EpiFindSimilarCasesDialog/index.ts +1 -0
  153. package/src/components/epi/EpiLegendaItem/EpiLegendaItem.tsx +106 -0
  154. package/src/components/epi/EpiLegendaItem/index.ts +1 -0
  155. package/src/components/epi/EpiLineList/EpiLineList.tsx +492 -0
  156. package/src/components/epi/EpiLineList/EpiLineListPrimaryMenu.tsx +189 -0
  157. package/src/components/epi/EpiLineList/EpiLineListSecondaryMenu.tsx +56 -0
  158. package/src/components/epi/EpiLineList/EpiLineListTitle.tsx +28 -0
  159. package/src/components/epi/EpiLineList/index.ts +1 -0
  160. package/src/components/epi/EpiLineList/useEpiLineListEmitDownloadOptions.tsx +102 -0
  161. package/src/components/epi/EpiMap/EpiMap.tsx +547 -0
  162. package/src/components/epi/EpiMap/index.ts +1 -0
  163. package/src/components/epi/EpiRemoveCasesFromEventDialog/EpiRemoveCasesFromEventDialog.tsx +169 -0
  164. package/src/components/epi/EpiRemoveCasesFromEventDialog/index.ts +1 -0
  165. package/src/components/epi/EpiRemoveFindSimilarCasesResultDialog/EpiRemoveFindSimilarCasesResultDialog.tsx +216 -0
  166. package/src/components/epi/EpiSequenceDownloadDialog/EpiSequenceDownloadDialog.tsx +151 -0
  167. package/src/components/epi/EpiSequenceDownloadDialog/index.ts +1 -0
  168. package/src/components/epi/EpiStratification/EpiStratification.tsx +241 -0
  169. package/src/components/epi/EpiStratification/index.ts +1 -0
  170. package/src/components/epi/EpiTree/EpiTree.tsx +906 -0
  171. package/src/components/epi/EpiTree/index.ts +1 -0
  172. package/src/components/epi/EpiTreeDescription/EpiTreeDescription.tsx +71 -0
  173. package/src/components/epi/EpiTreeDescription/index.ts +1 -0
  174. package/src/components/epi/EpiUpload/EpiUpload.tsx +107 -0
  175. package/src/components/epi/EpiUpload/EpiUploadCaseResultTable.tsx +383 -0
  176. package/src/components/epi/EpiUpload/EpiUploadCreateCases.tsx +266 -0
  177. package/src/components/epi/EpiUpload/EpiUploadMapColumns.tsx +261 -0
  178. package/src/components/epi/EpiUpload/EpiUploadMapSequences.tsx +332 -0
  179. package/src/components/epi/EpiUpload/EpiUploadNavigation.tsx +52 -0
  180. package/src/components/epi/EpiUpload/EpiUploadSelectFile.tsx +285 -0
  181. package/src/components/epi/EpiUpload/EpiUploadSelectSequenceFiles.tsx +375 -0
  182. package/src/components/epi/EpiUpload/EpiUploadValidate.tsx +199 -0
  183. package/src/components/epi/EpiUpload/EpiUploadValidateNavigation.tsx +34 -0
  184. package/src/components/epi/EpiUpload/index.ts +1 -0
  185. package/src/components/epi/EpiUserRightsDialog/EpiUserRightsDialog.tsx +101 -0
  186. package/src/components/epi/EpiUserRightsDialog/EpiUserRightsDialogCaseAccessPolicy.tsx +160 -0
  187. package/src/components/epi/EpiUserRightsDialog/index.ts +1 -0
  188. package/src/components/epi/EpiWarning/EpiWarning.tsx +39 -0
  189. package/src/components/epi/EpiWarning/index.ts +1 -0
  190. package/src/components/epi/EpiWidget/EpiWidget.tsx +255 -0
  191. package/src/components/epi/EpiWidget/index.ts +1 -0
  192. package/src/components/epi/EpiWidgetHeaderIconButton/EpiWidgetHeaderIconButton.tsx +40 -0
  193. package/src/components/epi/EpiWidgetHeaderIconButton/index.ts +1 -0
  194. package/src/components/epi/EpiWidgetMenu/EpiWidgetMenu.tsx +56 -0
  195. package/src/components/epi/EpiWidgetMenu/index.ts +1 -0
  196. package/src/components/epi/EpiWidgetUnavailable/EpiWidgetUnavailable.tsx +51 -0
  197. package/src/components/epi/EpiWidgetUnavailable/index.ts +1 -0
  198. package/src/components/filters/BooleanFilterField/BooleanFilterField.tsx +26 -0
  199. package/src/components/filters/BooleanFilterField/index.ts +1 -0
  200. package/src/components/filters/DateFilterField/DateFilterField.tsx +23 -0
  201. package/src/components/filters/DateFilterField/index.ts +1 -0
  202. package/src/components/filters/GeoFilterField/GeoFilterField.tsx +32 -0
  203. package/src/components/filters/GeoFilterField/index.ts +1 -0
  204. package/src/components/filters/MultiSelectFilterField/MultiSelectFilterField.tsx +31 -0
  205. package/src/components/filters/MultiSelectFilterField/index.ts +1 -0
  206. package/src/components/filters/NumberRangeFilterField/NumberRangeFilterField.tsx +20 -0
  207. package/src/components/filters/NumberRangeFilterField/index.ts +1 -0
  208. package/src/components/filters/TextFilterField/TextFilterField.tsx +18 -0
  209. package/src/components/filters/TextFilterField/index.ts +1 -0
  210. package/src/components/form/fields/Autocomplete/Autocomplete.tsx +270 -0
  211. package/src/components/form/fields/Autocomplete/index.ts +1 -0
  212. package/src/components/form/fields/CheckboxGroup/CheckboxGroup.tsx +192 -0
  213. package/src/components/form/fields/CheckboxGroup/index.ts +1 -0
  214. package/src/components/form/fields/DatePicker/DatePicker.tsx +167 -0
  215. package/src/components/form/fields/DatePicker/index.ts +1 -0
  216. package/src/components/form/fields/DateRangePicker/DateRangePicker.tsx +359 -0
  217. package/src/components/form/fields/DateRangePicker/index.ts +1 -0
  218. package/src/components/form/fields/NumberField/NumberField.tsx +277 -0
  219. package/src/components/form/fields/NumberField/index.ts +1 -0
  220. package/src/components/form/fields/NumberRangeInput/NumberRangeInput.tsx +297 -0
  221. package/src/components/form/fields/NumberRangeInput/index.ts +1 -0
  222. package/src/components/form/fields/RadioGroup/RadioGroup.tsx +130 -0
  223. package/src/components/form/fields/RadioGroup/index.ts +1 -0
  224. package/src/components/form/fields/RichTextEditor/RichTextEditor.tsx +321 -0
  225. package/src/components/form/fields/RichTextEditor/RichTextEditorContent.tsx +34 -0
  226. package/src/components/form/fields/RichTextEditor/index.ts +2 -0
  227. package/src/components/form/fields/RichTextEditor/useRichTextEditorExtensions.ts +174 -0
  228. package/src/components/form/fields/Select/Select.tsx +219 -0
  229. package/src/components/form/fields/Select/index.ts +1 -0
  230. package/src/components/form/fields/Switch/Switch.tsx +116 -0
  231. package/src/components/form/fields/Switch/index.ts +1 -0
  232. package/src/components/form/fields/TextField/TextField.tsx +170 -0
  233. package/src/components/form/fields/TextField/index.ts +1 -0
  234. package/src/components/form/fields/ToggleButtonGroup/ToggleButtonGroup.tsx +118 -0
  235. package/src/components/form/fields/ToggleButtonGroup/index.ts +1 -0
  236. package/src/components/form/fields/TransferList/TransferList.tsx +360 -0
  237. package/src/components/form/fields/TransferList/index.ts +1 -0
  238. package/src/components/form/fields/UploadButton/UploadButton.tsx +157 -0
  239. package/src/components/form/helpers/FormFieldHelperText/FormFieldHelperText.tsx +68 -0
  240. package/src/components/form/helpers/FormFieldHelperText/index.ts +1 -0
  241. package/src/components/form/helpers/FormFieldLoadingIndicator/FormFieldLoadingIndicator.tsx +22 -0
  242. package/src/components/form/helpers/FormFieldLoadingIndicator/index.ts +1 -0
  243. package/src/components/form/helpers/GenericForm/GenericForm.tsx +187 -0
  244. package/src/components/form/helpers/GenericForm/index.ts +1 -0
  245. package/src/components/ui/ApplicationBar/ApplicationBar.tsx +74 -0
  246. package/src/components/ui/ApplicationBar/ApplicationBarActions.tsx +124 -0
  247. package/src/components/ui/ApplicationBar/ApplicationBarActionsFeedbackItem.tsx +102 -0
  248. package/src/components/ui/ApplicationBar/ApplicationBarActionsInfotem.tsx +60 -0
  249. package/src/components/ui/ApplicationBar/ApplicationBarActionsNotificationsItem.tsx +82 -0
  250. package/src/components/ui/ApplicationBar/ApplicationBarActionsOrganizationSwitcherItem.tsx +58 -0
  251. package/src/components/ui/ApplicationBar/ApplicationBarActionsOutagesItem.tsx +75 -0
  252. package/src/components/ui/ApplicationBar/ApplicationBarActionsUserItem.tsx +60 -0
  253. package/src/components/ui/ApplicationBar/ApplicationBarNavigationMenu.tsx +159 -0
  254. package/src/components/ui/ApplicationBar/InfoMenu.tsx +120 -0
  255. package/src/components/ui/ApplicationBar/UserMenu.tsx +208 -0
  256. package/src/components/ui/ApplicationBar/UserOrganizationAdminMenuItem.tsx +69 -0
  257. package/src/components/ui/ApplicationBar/UserOwnOrganizationMenuItem.tsx +54 -0
  258. package/src/components/ui/ApplicationBar/index.ts +1 -0
  259. package/src/components/ui/ApplicationFooter/ApplicationFooter.tsx +121 -0
  260. package/src/components/ui/ApplicationFooter/ApplicationFooterLink.tsx +48 -0
  261. package/src/components/ui/ApplicationFooter/ApplicationFooterLinkSection.tsx +56 -0
  262. package/src/components/ui/ApplicationFooter/index.ts +1 -0
  263. package/src/components/ui/AuthenticationWrapper/AuthenticationWrapper.tsx +208 -0
  264. package/src/components/ui/AuthenticationWrapper/index.ts +1 -0
  265. package/src/components/ui/AuthorizationWrapper/AuthorizationWrapper.tsx +75 -0
  266. package/src/components/ui/AuthorizationWrapper/index.ts +1 -0
  267. package/src/components/ui/Breadcrumbs/Breadcrumbs.tsx +92 -0
  268. package/src/components/ui/Breadcrumbs/index.ts +1 -0
  269. package/src/components/ui/Confirmation/Confirmation.tsx +10 -0
  270. package/src/components/ui/Confirmation/ConfirmationRender.tsx +81 -0
  271. package/src/components/ui/Confirmation/index.ts +2 -0
  272. package/src/components/ui/ConsentDialog/ConsentDialog.tsx +57 -0
  273. package/src/components/ui/ConsentDialog/index.ts +1 -0
  274. package/src/components/ui/CopyToClipboardButton/CopyToClipboardButton.tsx +94 -0
  275. package/src/components/ui/CopyToClipboardButton/index.ts +1 -0
  276. package/src/components/ui/Dialog/Dialog.tsx +196 -0
  277. package/src/components/ui/Dialog/index.ts +1 -0
  278. package/src/components/ui/FileSelector/FileSelector.tsx +358 -0
  279. package/src/components/ui/FileSelector/index.ts +1 -0
  280. package/src/components/ui/GenericErrorMessage/GenericErrorMessage.tsx +168 -0
  281. package/src/components/ui/GenericErrorMessage/index.ts +1 -0
  282. package/src/components/ui/HomePageTrends/HomePageTrendCard.tsx +132 -0
  283. package/src/components/ui/HomePageTrends/HomePageTrends.tsx +312 -0
  284. package/src/components/ui/HomePageTrends/index.ts +1 -0
  285. package/src/components/ui/LicensesDialog/LicensesDialog.tsx +231 -0
  286. package/src/components/ui/LicensesDialog/index.ts +1 -0
  287. package/src/components/ui/LinearProgressWithLabel/LinearProgressWithLabel.tsx +31 -0
  288. package/src/components/ui/LinearProgressWithLabel/index.ts +1 -0
  289. package/src/components/ui/LoadingIndicator/LoadingIndicator.tsx +11 -0
  290. package/src/components/ui/LoadingIndicator/index.ts +1 -0
  291. package/src/components/ui/MyPermissionsDialog/MyPermissionsDialog.tsx +95 -0
  292. package/src/components/ui/MyPermissionsDialog/index.ts +1 -0
  293. package/src/components/ui/NavLink/NavLink.tsx +47 -0
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  604. package/src/pages/RouterErrorPage/RouterErrorPage.tsx +23 -0
  605. package/src/pages/RouterErrorPage/index.ts +1 -0
  606. package/src/pages/TrendsPage/TrendsPage.tsx +17 -0
  607. package/src/pages/TrendsPage/index.ts +1 -0
  608. package/src/pages/UploadPage/UploadPage.tsx +40 -0
  609. package/src/pages/UploadPage/index.ts +1 -0
  610. package/src/pages/UserAccessCasePoliciesAdminPage/UserAccessCasePoliciesAdminPage.tsx +209 -0
  611. package/src/pages/UserAccessCasePoliciesAdminPage/index.ts +1 -0
  612. package/src/pages/UserEffectiveRightsAdminPage/UserEffectiveRightsAdminPage.tsx +331 -0
  613. package/src/pages/UserEffectiveRightsAdminPage/index.ts +1 -0
  614. package/src/pages/UserEffectiveRightsTesterAdminPage/UserEffectiveRightsTesterAdminPage.tsx +283 -0
  615. package/src/pages/UserEffectiveRightsTesterAdminPage/index.ts +1 -0
  616. package/src/pages/UserInvitationsAdminPage/UserInvitationConsumeDialog.tsx +143 -0
  617. package/src/pages/UserInvitationsAdminPage/UserInvitationShareDialog.tsx +100 -0
  618. package/src/pages/UserInvitationsAdminPage/UserInvitationsAdminPage.tsx +218 -0
  619. package/src/pages/UserInvitationsAdminPage/index.ts +1 -0
  620. package/src/pages/UserShareCasePoliciesAdminPage/UserShareCasePoliciesAdminPage.tsx +183 -0
  621. package/src/pages/UserShareCasePoliciesAdminPage/index.ts +1 -0
  622. package/src/pages/UsersAdminPage/UsersAdminPage.tsx +240 -0
  623. package/src/pages/UsersAdminPage/index.ts +1 -0
  624. package/src/routes/adminRoutes.tsx +801 -0
  625. package/src/routes/index.ts +2 -0
  626. package/src/routes/routes.tsx +235 -0
  627. package/src/setup/index.ts +1 -0
  628. package/src/setup/setup.ts +5 -0
  629. package/src/setup/yup.ts +203 -0
  630. package/src/stores/epiDashboardStore/epiDashboardStore.ts +750 -0
  631. package/src/stores/epiDashboardStore/epiDashboardStoreContext.tsx +6 -0
  632. package/src/stores/epiDashboardStore/index.ts +2 -0
  633. package/src/stores/epiUploadStore/epiUploadStore.ts +351 -0
  634. package/src/stores/epiUploadStore/epiUploadStoreContext.tsx +6 -0
  635. package/src/stores/epiUploadStore/index.ts +2 -0
  636. package/src/stores/oidcStore/index.ts +1 -0
  637. package/src/stores/oidcStore/oidcStore.ts +43 -0
  638. package/src/stores/outagesStore/index.ts +1 -0
  639. package/src/stores/outagesStore/outagesStore.ts +31 -0
  640. package/src/stores/tableStore/TableStoreContext.tsx +6 -0
  641. package/src/stores/tableStore/TableStoreContextProvider.tsx +20 -0
  642. package/src/stores/tableStore/index.ts +4 -0
  643. package/src/stores/tableStore/tableStore.ts +547 -0
  644. package/src/stores/tableStore/useTableStoreContext.tsx +7 -0
  645. package/src/stores/userProfileStore/index.ts +1 -0
  646. package/src/stores/userProfileStore/userProfileStore.ts +112 -0
  647. package/src/test/integration/lib/render.tsx +33 -0
  648. package/src/test/integration/tests/integration-example/HelloWorld.test.tsx +14 -0
  649. package/src/test/integration/tests/integration-example/HelloWorld.tsx +9 -0
  650. package/src/test/setup-browser.ts +3 -0
  651. package/src/test/setup-jsdom.ts +6 -0
  652. package/src/test/setup.ts +9 -0
  653. package/src/utils/AbacUtil/AbacUtil.ts +21 -0
  654. package/src/utils/AbacUtil/index.ts +1 -0
  655. package/src/utils/AxiosUtil/AxiosUtil.test.ts +66 -0
  656. package/src/utils/AxiosUtil/AxiosUtil.ts +47 -0
  657. package/src/utils/AxiosUtil/index.ts +1 -0
  658. package/src/utils/CaseSelectionUtil/CaseSelectionUtil.ts +32 -0
  659. package/src/utils/CaseSelectionUtil/index.ts +1 -0
  660. package/src/utils/CaseSetUtil/CaseSetUtil.ts +13 -0
  661. package/src/utils/CaseSetUtil/index.ts +1 -0
  662. package/src/utils/CaseTypeUtil/CaseTypeUtil.ts +178 -0
  663. package/src/utils/CaseTypeUtil/index.ts +1 -0
  664. package/src/utils/CaseUtil/CaseUtil.ts +401 -0
  665. package/src/utils/CaseUtil/index.ts +1 -0
  666. package/src/utils/DashboardUtil/DashboardUtil.ts +46 -0
  667. package/src/utils/DashboardUtil/index.ts +1 -0
  668. package/src/utils/DataHookUtil/DataHookUtil.ts +137 -0
  669. package/src/utils/DataHookUtil/index.ts +1 -0
  670. package/src/utils/DataSetUtil/DataSetUtil.ts +70 -0
  671. package/src/utils/DataSetUtil/index.ts +1 -0
  672. package/src/utils/DataUtil/DataUtil.ts +84 -0
  673. package/src/utils/DataUtil/index.ts +1 -0
  674. package/src/utils/DownloadUtil/DownloadUtil.ts +237 -0
  675. package/src/utils/DownloadUtil/index.ts +1 -0
  676. package/src/utils/EffectiveRightsUtil/EffectiveRightsUtil.ts +142 -0
  677. package/src/utils/EffectiveRightsUtil/index.ts +1 -0
  678. package/src/utils/EpiCurveUtil/EpiCurveUtil.ts +180 -0
  679. package/src/utils/EpiCurveUtil/index.ts +1 -0
  680. package/src/utils/EpiFilterUtil/EpiFilterUtil.ts +232 -0
  681. package/src/utils/EpiFilterUtil/index.ts +1 -0
  682. package/src/utils/EpiLineListUtil/EpiLineListUtil.ts +15 -0
  683. package/src/utils/EpiLineListUtil/index.ts +1 -0
  684. package/src/utils/EpiMapUtil/EpiMapUtil.test.ts +54 -0
  685. package/src/utils/EpiMapUtil/EpiMapUtil.ts +80 -0
  686. package/src/utils/EpiMapUtil/index.ts +1 -0
  687. package/src/utils/EpiTreeUtil/EpiTreeUtil.test.ts +2467 -0
  688. package/src/utils/EpiTreeUtil/EpiTreeUtil.ts +1055 -0
  689. package/src/utils/EpiTreeUtil/index.ts +1 -0
  690. package/src/utils/EpiUploadUtil/EpiUploadUtil.ts +857 -0
  691. package/src/utils/EpiUploadUtil/index.ts +1 -0
  692. package/src/utils/FileUtil/FileUtil.ts +22 -0
  693. package/src/utils/FileUtil/index.ts +1 -0
  694. package/src/utils/FormUtil/FormUtil.test.ts +36 -0
  695. package/src/utils/FormUtil/FormUtil.ts +63 -0
  696. package/src/utils/FormUtil/index.ts +1 -0
  697. package/src/utils/MenuDataUtil/MenuDataUtil.ts +54 -0
  698. package/src/utils/MenuDataUtil/index.ts +1 -0
  699. package/src/utils/NewickUtil/NewickUtil.test.ts +187 -0
  700. package/src/utils/NewickUtil/NewickUtil.ts +69 -0
  701. package/src/utils/NewickUtil/index.ts +1 -0
  702. package/src/utils/NotificationUtil/NotificationUtil.ts +28 -0
  703. package/src/utils/NotificationUtil/index.ts +1 -0
  704. package/src/utils/NumberUtil/NumberUtil.test.ts +113 -0
  705. package/src/utils/NumberUtil/NumberUtil.ts +67 -0
  706. package/src/utils/NumberUtil/index.ts +1 -0
  707. package/src/utils/ObjectUtil/ObjectUtil.test.ts +43 -0
  708. package/src/utils/ObjectUtil/ObjectUtil.ts +28 -0
  709. package/src/utils/ObjectUtil/index.ts +1 -0
  710. package/src/utils/OutageUtil/OutageUtil.test.ts +108 -0
  711. package/src/utils/OutageUtil/OutageUtil.ts +81 -0
  712. package/src/utils/OutageUtil/index.ts +1 -0
  713. package/src/utils/QueryUtil/QueryUtil.test.ts +42 -0
  714. package/src/utils/QueryUtil/QueryUtil.ts +105 -0
  715. package/src/utils/QueryUtil/index.ts +1 -0
  716. package/src/utils/StringUtil/StringUtil.test.ts +61 -0
  717. package/src/utils/StringUtil/StringUtil.ts +91 -0
  718. package/src/utils/StringUtil/index.ts +1 -0
  719. package/src/utils/TableUtil/TableUtil.ts +665 -0
  720. package/src/utils/TableUtil/index.ts +1 -0
  721. package/src/utils/TestIdUtil/TestIdUtil.test.ts +12 -0
  722. package/src/utils/TestIdUtil/TestIdUtil.ts +13 -0
  723. package/src/utils/TestIdUtil/index.ts +1 -0
  724. package/src/utils/TimeUtil/TimeUtil.ts +38 -0
  725. package/src/utils/TimeUtil/index.ts +1 -0
  726. package/src/utils/UserManagerUtil/UserManagerUtil.test.ts +41 -0
  727. package/src/utils/UserManagerUtil/UserManagerUtil.ts +39 -0
  728. package/src/utils/UserManagerUtil/index.ts +1 -0
  729. package/src/utils/ValidationUtil/ValidationUtil.test.ts +61 -0
  730. package/src/utils/ValidationUtil/ValidationUtil.ts +56 -0
  731. package/src/utils/ValidationUtil/index.ts +1 -0
  732. package/dist/environment.d.ts +0 -54
  733. package/dist/index.d.ts +0 -16074
  734. /package/{dist → src/@types}/mui.d.ts +0 -0
  735. /package/{dist → src/@types}/ui.d.ts +0 -0
  736. /package/{dist → src/@types}/vite-env.d.ts +0 -0
  737. /package/{dist → src/@types}/yup.d.ts +0 -0
  738. /package/{dist → src}/locale/en.json +0 -0
  739. /package/{dist → src}/locale/nl.json +0 -0
@@ -0,0 +1,390 @@
1
+ import {
2
+ useTheme,
3
+ Box,
4
+ Alert,
5
+ AlertTitle,
6
+ } from '@mui/material';
7
+ import {
8
+ useRef,
9
+ useState,
10
+ useMemo,
11
+ useCallback,
12
+ useEffect,
13
+ useContext,
14
+ } from 'react';
15
+ import { ErrorBoundary } from 'react-error-boundary';
16
+ import { useTranslation } from 'react-i18next';
17
+ import { useStore } from 'zustand';
18
+ import { useShallow } from 'zustand/shallow';
19
+ import InfoIcon from '@mui/icons-material/Info';
20
+
21
+ import CollectionIcon from '../../../assets/icons/CollectionIcon.svg?react';
22
+ import type { EpiCaseSetInfoDialogRefMethods } from '../EpiCaseSetInfoDialog';
23
+ import { EpiCaseSetInfoDialog } from '../EpiCaseSetInfoDialog';
24
+ import type { EpiCaseTypeInfoDialogRefMethods } from '../EpiCaseTypeInfoDialog';
25
+ import { EpiCaseTypeInfoDialog } from '../EpiCaseTypeInfoDialog';
26
+ import { withEpiDashboardStore } from '../EpiDashboardStoreLoader';
27
+ import {
28
+ EpiAddCasesToEventDialog,
29
+ type EpiAddCasesToEventDialogRefMethods,
30
+ } from '../EpiAddCasesToEventDialog';
31
+ import {
32
+ EpiBulkEditCaseDialog,
33
+ type EpiBulkEditCaseDialogRefMethods,
34
+ } from '../EpiBulkEditCaseDialog';
35
+ import {
36
+ EpiCaseInfoDialog,
37
+ type EpiCaseInfoDialogRefMethods,
38
+ } from '../EpiCaseInfoDialog';
39
+ import {
40
+ EpiContactDetailsDialog,
41
+ type EpiContactDetailsDialogRefMethods,
42
+ } from '../EpiContactDetailsDialog';
43
+ import {
44
+ EpiCreateEventDialog,
45
+ type EpiCreateEventDialogRefMethods,
46
+ } from '../EpiCreateEventDialog';
47
+ import {
48
+ EpiRemoveCasesFromEventDialog,
49
+ type EpiRemoveCasesFromEventDialogRefMethods,
50
+ } from '../EpiRemoveCasesFromEventDialog';
51
+ import {
52
+ EpiSequenceDownloadDialog,
53
+ type EpiSequenceDownloadDialogRefMethods,
54
+ } from '../EpiSequenceDownloadDialog';
55
+ import type { CaseSet } from '../../../api';
56
+ import { ConfigManager } from '../../../classes/managers/ConfigManager';
57
+ import { EpiEventBusManager } from '../../../classes/managers/EpiEventBusManager';
58
+ import { KeyboardShortcutManager } from '../../../classes/managers/KeyboardShortcutManager';
59
+ import { Subject } from '../../../classes/Subject';
60
+ import type { EpiLinkedScrollSubjectValue } from '../../../models/epi';
61
+ import { EPI_ZONE } from '../../../models/epi';
62
+ import { EpiDashboardStoreContext } from '../../../stores/epiDashboardStore';
63
+ import { userProfileStore } from '../../../stores/userProfileStore';
64
+ import { DashboardUtil } from '../../../utils/DashboardUtil';
65
+ import { ResponseHandler } from '../../ui/ResponseHandler';
66
+ import {
67
+ SidebarMenu,
68
+ SidebarMenuItem,
69
+ } from '../../ui/Sidebar';
70
+ import {
71
+ TableFiltersSidebarItemIcon,
72
+ TableFiltersSidebarItem,
73
+ } from '../../ui/Table';
74
+ import { EpiCurve } from '../EpiCurve';
75
+ import { EpiLineList } from '../EpiLineList';
76
+ import { EpiMap } from '../EpiMap';
77
+ import { EpiStratification } from '../EpiStratification';
78
+ import type { EpiTreeRef } from '../EpiTree';
79
+ import { EpiTree } from '../EpiTree';
80
+ import { EpiWidgetUnavailable } from '../EpiWidgetUnavailable';
81
+ import {
82
+ EpiFindSimilarCasesDialog,
83
+ type EpiFindSimilarCasesDialogRefMethods,
84
+ } from '../EpiFindSimilarCasesDialog';
85
+ import {
86
+ EpiRemoveFindSimilarCasesResultDialog,
87
+ type EpiRemoveFindSimilarCasesResultDialogRefMethods,
88
+ } from '../EpiRemoveFindSimilarCasesResultDialog/EpiRemoveFindSimilarCasesResultDialog';
89
+
90
+ import {
91
+ EpiDashboardSettingsSidebarItemIcon,
92
+ EpiDashboardSettingsSidebarItem,
93
+ } from './EpiDashboardSettingsSidebarItem';
94
+ import { EpiDashboardLayoutRenderer } from './EpiDashboardLayoutRenderer';
95
+ import type { ForwardRefEpiDashboardLayoutRendererRefMethods } from './EpiDashboardLayoutRenderer';
96
+ import {
97
+ EpiDashboardDownloadSidebarItem,
98
+ EpiDashboardDownloadSidebarItemIcon,
99
+ } from './EpiDashboardDownloadSidebarItem';
100
+
101
+ type EpiDashboardProps = {
102
+ readonly caseSet?: CaseSet;
103
+ readonly caseTypeId: string;
104
+ };
105
+
106
+ export const EpiDashboard = withEpiDashboardStore(({ caseSet }: EpiDashboardProps) => {
107
+ const { t } = useTranslation();
108
+ const theme = useTheme();
109
+ const epiDashboardLayoutRendererRef = useRef<ForwardRefEpiDashboardLayoutRendererRefMethods>(null);
110
+ const containerRef = useRef<HTMLDivElement>(null);
111
+ const epiCaseSetInfoDialogRef = useRef<EpiCaseSetInfoDialogRefMethods>(null);
112
+ const epiCaseTypeInfoDialogRef = useRef<EpiCaseTypeInfoDialogRefMethods>(null);
113
+ const epiContactDetailsDialogRef = useRef<EpiContactDetailsDialogRefMethods>(null);
114
+ const epiSequenceDownloadDialogRef = useRef<EpiSequenceDownloadDialogRefMethods>(null);
115
+ const epiCaseInfoDialogRef = useRef<EpiCaseInfoDialogRefMethods>(null);
116
+ const epiFindSimilarCasesDialogRef = useRef<EpiFindSimilarCasesDialogRefMethods>(null);
117
+ const epiCreateEventDialogRef = useRef<EpiCreateEventDialogRefMethods>(null);
118
+ const epiRemoveCasesFromEventDialogRef = useRef<EpiRemoveCasesFromEventDialogRefMethods>(null);
119
+ const epiAddCasesToEventDialogRef = useRef<EpiAddCasesToEventDialogRefMethods>(null);
120
+ const epiBulkEditCaseDialogRef = useRef<EpiBulkEditCaseDialogRefMethods>(null);
121
+ const epiRemoveFindSimilarCasesResultDialogRef = useRef<EpiRemoveFindSimilarCasesResultDialogRefMethods>(null);
122
+ const [isFilterSidebarOpen, setIsFilterSidebarOpen] = useState(false);
123
+ const [isSettingsSidebarOpen, setIsSettingsSidebarOpen] = useState(false);
124
+ const [isDownloadSidebarOpen, setIsDownloadSidebarOpen] = useState(false);
125
+ const epiTreeRef = useRef<EpiTreeRef>(null);
126
+ const linkedScrollSubject = useMemo(() => {
127
+ return new Subject<EpiLinkedScrollSubjectValue>();
128
+ }, []);
129
+ const epiDashboardStore = useContext(EpiDashboardStoreContext);
130
+ const fetchData = useStore(epiDashboardStore, useShallow((state) => state.fetchData));
131
+ const dataError = useStore(epiDashboardStore, (state) => state.dataError);
132
+ const completeCaseType = useStore(epiDashboardStore, (state) => state.completeCaseType);
133
+ const activeFiltersCount = useStore(epiDashboardStore, (state) => state.filters.filter(f => !f.isInitialFilterValue()).length);
134
+ const numLayoutZones = useStore(userProfileStore, (state) => Object.keys(state.epiDashboardLayoutUserConfig.zones).length);
135
+ const numVisibleLayoutZones = useStore(userProfileStore, (state) => DashboardUtil.getEnabledZones(state.epiDashboardLayoutUserConfig).length);
136
+ const numHiddenLayoutZones = numLayoutZones - numVisibleLayoutZones;
137
+ const isMaxResultsExceeded = useStore(epiDashboardStore, (state) => state.isMaxResultsExceeded);
138
+ const isMaxResultsExceededDismissed = useStore(epiDashboardStore, (state) => state.isMaxResultsExceededDismissed);
139
+
140
+ const onMaxResultsExceededButtonClose = useCallback(() => {
141
+ epiDashboardStore.setState({ isMaxResultsExceededDismissed: true });
142
+ }, [epiDashboardStore]);
143
+
144
+ useEffect(() => {
145
+ const eventBus = EpiEventBusManager.instance;
146
+ const removers = [
147
+ eventBus.addEventListener('onEventCreated', () => {
148
+ // eslint-disable-next-line @typescript-eslint/no-floating-promises
149
+ fetchData();
150
+ }),
151
+ eventBus.addEventListener('openAddCasesToEventDialog', (...args) => epiAddCasesToEventDialogRef.current?.open(...args)),
152
+ eventBus.addEventListener('openCaseInfoDialog', (...args) => epiCaseInfoDialogRef.current?.open(...args)),
153
+ eventBus.addEventListener('openContactDetailsDialog', (...args) => epiContactDetailsDialogRef.current?.open(...args)),
154
+ eventBus.addEventListener('openCreateEventDialog', (...args) => epiCreateEventDialogRef.current?.open(...args)),
155
+ eventBus.addEventListener('openFindSimilarCasesDialog', (...args) => epiFindSimilarCasesDialogRef.current?.open(...args)),
156
+ eventBus.addEventListener('openRemoveFindSimilarCasesResultDialog', (...args) => epiRemoveFindSimilarCasesResultDialogRef.current?.open(...args)),
157
+ eventBus.addEventListener('openRemoveCasesFromEventDialog', (...args) => epiRemoveCasesFromEventDialogRef.current?.open(...args)),
158
+ eventBus.addEventListener('openSequenceDownloadDialog', (...args) => epiSequenceDownloadDialogRef.current?.open(...args)),
159
+ eventBus.addEventListener('openBulkEditCaseDialog', (...args) => epiBulkEditCaseDialogRef.current?.open(...args)),
160
+ eventBus.addEventListener('openFiltersMenu', () => setIsFilterSidebarOpen(true)),
161
+ ];
162
+ return () => {
163
+ removers.forEach(callbackfn => callbackfn());
164
+ };
165
+ }, [fetchData]);
166
+
167
+ useEffect(() => {
168
+ const removers = [
169
+ KeyboardShortcutManager.instance.registerShortcut({ key: 'f', modifier: null, callback: () => {
170
+ setIsFilterSidebarOpen(x => !x);
171
+ } }),
172
+ KeyboardShortcutManager.instance.registerShortcut({ key: 's', modifier: null, callback: () => {
173
+ setIsSettingsSidebarOpen(x => !x);
174
+ } }),
175
+ KeyboardShortcutManager.instance.registerShortcut({ key: 'i', modifier: null, callback: () => {
176
+ epiCaseTypeInfoDialogRef.current.open();
177
+ } }),
178
+ ];
179
+ return () => {
180
+ removers.forEach(callbackfn => callbackfn());
181
+ };
182
+ }, []);
183
+
184
+ const onEpiDashboardFilterSidebarClose = useCallback(() => {
185
+ setIsFilterSidebarOpen(false);
186
+ }, []);
187
+
188
+ const onEpiDashboardOpenFilterSidebarButtonClick = useCallback(() => {
189
+ setIsFilterSidebarOpen(true);
190
+ }, []);
191
+
192
+ const onEpiDashboardSettingsSidebarClose = useCallback(() => {
193
+ setIsSettingsSidebarOpen(false);
194
+ }, []);
195
+
196
+ const onEpiDashboardDownloadSidebarClose = useCallback(() => {
197
+ setIsDownloadSidebarOpen(false);
198
+ }, []);
199
+
200
+ const onEpiDashboardLayoutSelectorSidebarButtonClick = useCallback(() => {
201
+ setIsSettingsSidebarOpen(true);
202
+ }, []);
203
+
204
+ const onEpiDashboardOpenDownloadButtonClick = useCallback(() => {
205
+ setIsDownloadSidebarOpen(true);
206
+ }, []);
207
+
208
+ const onEpiDashboardOpenInfoSidebarButtonClick = useCallback(() => {
209
+ epiCaseTypeInfoDialogRef.current.open();
210
+ }, []);
211
+
212
+ const onEpiDashboardOpenCaseSetDescriptionButtonClick = useCallback(() => {
213
+ epiCaseSetInfoDialogRef.current.open({
214
+ caseSetId: caseSet?.id,
215
+ caseTypeId: completeCaseType?.id,
216
+ });
217
+ }, [caseSet?.id, completeCaseType?.id]);
218
+
219
+ const onEpiDashboardLayoutSelectorSidebarReset = useCallback(() => {
220
+ epiDashboardLayoutRendererRef.current?.reset();
221
+ }, []);
222
+
223
+ const onEpiListLink = useCallback(() => {
224
+ epiTreeRef.current?.link();
225
+ }, []);
226
+
227
+ const shouldShowMaxResultsExceededAlert = useMemo(() => {
228
+ return !!isMaxResultsExceeded && !isMaxResultsExceededDismissed;
229
+ }, [isMaxResultsExceededDismissed, isMaxResultsExceeded]);
230
+
231
+ return (
232
+ <Box
233
+ ref={containerRef}
234
+ sx={{
235
+ height: '100%',
236
+ width: '100%',
237
+ position: 'relative',
238
+ }}
239
+ >
240
+ <ResponseHandler
241
+ error={dataError}
242
+ isLoading={false}
243
+ >
244
+
245
+ {/* Sidebar */}
246
+ <SidebarMenu>
247
+ <SidebarMenuItem
248
+ first
249
+ badgeColor={'secondary'}
250
+ badgeContent={activeFiltersCount}
251
+ icon={<TableFiltersSidebarItemIcon />}
252
+ testIdAttributes={{ name: 'filters' }}
253
+ title={t`Open filters`}
254
+ onClick={onEpiDashboardOpenFilterSidebarButtonClick}
255
+ />
256
+ <SidebarMenuItem
257
+ badgeColor={numHiddenLayoutZones === numLayoutZones ? 'error' : 'secondary'}
258
+ badgeContent={numHiddenLayoutZones === numLayoutZones ? '!' : numHiddenLayoutZones}
259
+ icon={<EpiDashboardSettingsSidebarItemIcon />}
260
+ testIdAttributes={{ name: 'dashboard' }}
261
+ title={t('Change dashboard layout (hidden zones: {{numHiddenLayoutZones}})', { numHiddenLayoutZones })}
262
+ onClick={onEpiDashboardLayoutSelectorSidebarButtonClick}
263
+ />
264
+ <SidebarMenuItem
265
+ icon={<InfoIcon />}
266
+ testIdAttributes={{ name: 'case' }}
267
+ title={t`Show case type information`}
268
+ onClick={onEpiDashboardOpenInfoSidebarButtonClick}
269
+ />
270
+ {caseSet && (
271
+ <SidebarMenuItem
272
+ icon={<CollectionIcon />}
273
+ testIdAttributes={{ name: 'event' }}
274
+ title={t`Show event information`}
275
+ onClick={onEpiDashboardOpenCaseSetDescriptionButtonClick}
276
+ />
277
+ )}
278
+ <SidebarMenuItem
279
+ icon={<EpiDashboardDownloadSidebarItemIcon />}
280
+ testIdAttributes={{ name: 'download' }}
281
+ title={t`Download`}
282
+ onClick={onEpiDashboardOpenDownloadButtonClick}
283
+ />
284
+ <TableFiltersSidebarItem
285
+ open={isFilterSidebarOpen}
286
+ onClose={onEpiDashboardFilterSidebarClose}
287
+ />
288
+ <EpiDashboardSettingsSidebarItem
289
+ open={isSettingsSidebarOpen}
290
+ onClose={onEpiDashboardSettingsSidebarClose}
291
+ onReset={onEpiDashboardLayoutSelectorSidebarReset}
292
+ />
293
+ <EpiCaseTypeInfoDialog
294
+ ref={epiCaseTypeInfoDialogRef}
295
+ />
296
+ {caseSet && (
297
+ <EpiCaseSetInfoDialog ref={epiCaseSetInfoDialogRef} />
298
+ )}
299
+ <EpiDashboardDownloadSidebarItem
300
+ open={isDownloadSidebarOpen}
301
+ onClose={onEpiDashboardDownloadSidebarClose}
302
+ />
303
+ </SidebarMenu>
304
+ {/* Content */}
305
+ <Box
306
+ sx={{
307
+ width: '100%',
308
+ height: '100%',
309
+ display: 'grid',
310
+ gridTemplateRows: `${shouldShowMaxResultsExceededAlert ? 'max-content ' : ''}max-content auto`,
311
+ paddingLeft: theme.spacing(ConfigManager.instance.config.layout.SIDEBAR_MENU_WIDTH + 1),
312
+ }}
313
+ >
314
+ {shouldShowMaxResultsExceededAlert && (
315
+ <Box>
316
+ <Alert
317
+ severity={'warning'}
318
+ sx={{
319
+ width: '100%',
320
+ }}
321
+ onClose={onMaxResultsExceededButtonClose}
322
+ >
323
+ <AlertTitle>
324
+ {t`Maximum number of results exceeded`}
325
+ </AlertTitle>
326
+ {t('The maximum number of results for {{caseTypeName}} ({{maxResultsForCaseType}}) has been exceeded. Refine your filters to reduce the number of results.', { maxResultsForCaseType: completeCaseType.read_max_n_cases, caseTypeName: completeCaseType.name })}
327
+ </Alert>
328
+ </Box>
329
+ )}
330
+ <Box>
331
+ <EpiStratification />
332
+ </Box>
333
+ <Box>
334
+ <EpiDashboardLayoutRenderer
335
+ ref={epiDashboardLayoutRendererRef}
336
+ disabled={isFilterSidebarOpen || isSettingsSidebarOpen}
337
+ epiCurveWidget={(
338
+ <ErrorBoundary
339
+ fallback={(
340
+ <EpiWidgetUnavailable
341
+ epiZone={EPI_ZONE.EPI_CURVE}
342
+ widgetName={t`epi curve`}
343
+ />
344
+ )}
345
+ >
346
+ <EpiCurve />
347
+ </ErrorBoundary>
348
+ )}
349
+ lineListWidget={(
350
+ <EpiLineList
351
+ caseSet={caseSet}
352
+ linkedScrollSubject={linkedScrollSubject}
353
+ onLink={onEpiListLink}
354
+ />
355
+ )}
356
+ mapWidget={(
357
+ <ErrorBoundary
358
+ fallback={(
359
+ <EpiWidgetUnavailable
360
+ epiZone={EPI_ZONE.MAP}
361
+ widgetName={t`map`}
362
+ />
363
+ )}
364
+ >
365
+ <EpiMap />
366
+ </ErrorBoundary>
367
+ )}
368
+ phylogeneticTreeWidget={(
369
+ <EpiTree
370
+ ref={epiTreeRef}
371
+ linkedScrollSubject={linkedScrollSubject}
372
+ itemHeight={ConfigManager.instance.config.epiLineList.TABLE_ROW_HEIGHT}
373
+ />
374
+ )}
375
+ />
376
+ </Box>
377
+ </Box>
378
+ </ResponseHandler>
379
+ <EpiContactDetailsDialog ref={epiContactDetailsDialogRef} />
380
+ <EpiFindSimilarCasesDialog ref={epiFindSimilarCasesDialogRef} />
381
+ <EpiRemoveFindSimilarCasesResultDialog ref={epiRemoveFindSimilarCasesResultDialogRef} />
382
+ <EpiSequenceDownloadDialog ref={epiSequenceDownloadDialogRef} />
383
+ <EpiCaseInfoDialog ref={epiCaseInfoDialogRef} />
384
+ <EpiCreateEventDialog ref={epiCreateEventDialogRef} />
385
+ <EpiRemoveCasesFromEventDialog ref={epiRemoveCasesFromEventDialogRef} />
386
+ <EpiAddCasesToEventDialog ref={epiAddCasesToEventDialogRef} />
387
+ <EpiBulkEditCaseDialog ref={epiBulkEditCaseDialogRef} />
388
+ </Box>
389
+ );
390
+ });
@@ -0,0 +1,154 @@
1
+ import {
2
+ Box,
3
+ Link,
4
+ Typography,
5
+ useTheme,
6
+ } from '@mui/material';
7
+ import { useTranslation } from 'react-i18next';
8
+ import DownloadIcon from '@mui/icons-material/Download';
9
+ import {
10
+ Fragment,
11
+ useCallback,
12
+ useEffect,
13
+ useState,
14
+ } from 'react';
15
+
16
+ import type { SidebarItemSharedProps } from '../../ui/Sidebar';
17
+ import { SidebarItem } from '../../ui/Sidebar';
18
+ import type {
19
+ DownloadConfig,
20
+ DownloadConfigItem,
21
+ DownloadConfigSection,
22
+ } from '../../../classes/managers/EpiEventBusManager';
23
+ import { EpiEventBusManager } from '../../../classes/managers/EpiEventBusManager';
24
+ import { ConfigManager } from '../../../classes/managers/ConfigManager';
25
+
26
+
27
+ export type EpiDashboardDownloadSidebarItemProps = SidebarItemSharedProps;
28
+
29
+ export const EpiDashboardDownloadSidebarItemIcon = DownloadIcon;
30
+
31
+ const EpiDashboardDownloadSidebarItemContent = () => {
32
+ const theme = useTheme();
33
+ const { t } = useTranslation();
34
+ const [downloadConfigs, setDownloadConfigs] = useState<DownloadConfig[]>([]);
35
+
36
+ useEffect(() => {
37
+ EpiEventBusManager.instance.addEventListener('onDownloadOptionsChanged', (payload) => {
38
+ if (!payload?.zone) {
39
+ return;
40
+ }
41
+ setDownloadConfigs(prevDownloadOptions => {
42
+ if (payload.items === null) {
43
+ return prevDownloadOptions.filter(item => item.zone !== payload.zone);
44
+ }
45
+ return [
46
+ ...prevDownloadOptions.filter(item => item.zone !== payload.zone),
47
+ payload,
48
+ ].sort((a, b) => {
49
+ return ConfigManager.instance.config.epi.DOWNLOAD_SECTION_ORDER.indexOf(a.zone) - ConfigManager.instance.config.epi.DOWNLOAD_SECTION_ORDER.indexOf(b.zone);
50
+ });
51
+ });
52
+ });
53
+ EpiEventBusManager.instance.emit('onDownloadOptionsRequested');
54
+ }, []);
55
+
56
+ const renderDownloadItem = useCallback((item: DownloadConfigItem, forceDisabled?: boolean) => {
57
+ return (
58
+ <Box
59
+ key={item.label}
60
+ sx={{ marginLeft: 1 }}
61
+ >
62
+ {(forceDisabled || item.disabled || !item.callback) ? (
63
+ <Typography>
64
+ {item.label}
65
+ </Typography>
66
+ ) : (
67
+ <Link
68
+ tabIndex={0}
69
+ component={'button'}
70
+ // eslint-disable-next-line react/jsx-no-bind
71
+ onClick={() => item.callback()}
72
+ >
73
+ {item.label}
74
+ </Link>
75
+ )}
76
+ </Box>
77
+ );
78
+ }, []);
79
+
80
+ const renderDownloadSection = useCallback((section: DownloadConfigSection) => {
81
+ return (
82
+ <Box key={section.label}>
83
+ <Typography variant={'h6'}>
84
+ {section.label}
85
+ </Typography>
86
+ {section.items.map(item => renderDownloadItem(item, section.disabled))}
87
+ </Box>
88
+ );
89
+ }, [renderDownloadItem]);
90
+
91
+ return (
92
+ <Box
93
+ sx={{
94
+ width: theme.spacing(59),
95
+ }}
96
+ >
97
+ {downloadConfigs.map((config) => (
98
+ <Box
99
+ key={config.zone}
100
+ sx={{
101
+ padding: theme.spacing(1),
102
+ borderBottom: `1px solid ${theme.palette.divider}`,
103
+ }}
104
+ >
105
+ <Box>
106
+ <Typography
107
+ color={config.disabled ? theme.palette.text.disabled : undefined}
108
+ variant={'h5'}
109
+ >
110
+ {config.zoneLabel}
111
+ </Typography>
112
+ </Box>
113
+ {config.disabled && (
114
+ <Box sx={{ padding: theme.spacing(1) }}>
115
+ <Typography>
116
+ {t`No data available for download.`}
117
+ </Typography>
118
+ </Box>
119
+ )}
120
+ {!config.disabled && config.items.map((item) => {
121
+ if ('items' in item && item.disabled) {
122
+ return null;
123
+ }
124
+ return (
125
+ <Fragment key={item.label}>
126
+ {'items' in item
127
+ ? renderDownloadSection(item)
128
+ : renderDownloadItem(item)}
129
+ </Fragment>
130
+ );
131
+ })}
132
+ </Box>
133
+ ))}
134
+ </Box>
135
+ );
136
+ };
137
+
138
+ export const EpiDashboardDownloadSidebarItem = ({ open, onClose }: EpiDashboardDownloadSidebarItemProps) => {
139
+ const { t } = useTranslation();
140
+
141
+ return (
142
+ <SidebarItem
143
+ closeIcon={<EpiDashboardDownloadSidebarItemIcon />}
144
+ closeIconTooltipText={t`Close download`}
145
+ open={open}
146
+ title={t`Download`}
147
+ width={60}
148
+ testIdAttributes={{ name: 'EpiDashboardDownloadSidebarItem' }}
149
+ onClose={onClose}
150
+ >
151
+ {open && <EpiDashboardDownloadSidebarItemContent />}
152
+ </SidebarItem>
153
+ );
154
+ };
@@ -0,0 +1,89 @@
1
+ import {
2
+ Box,
3
+ Button,
4
+ FormGroup,
5
+ } from '@mui/material';
6
+ import { useTranslation } from 'react-i18next';
7
+ import RestartAltIcon from '@mui/icons-material/RestartAlt';
8
+ import {
9
+ FormProvider,
10
+ useForm,
11
+ useWatch,
12
+ } from 'react-hook-form';
13
+ import {
14
+ useCallback,
15
+ useEffect,
16
+ } from 'react';
17
+ import { useStore } from 'zustand';
18
+ import noop from 'lodash/noop';
19
+ import { useShallow } from 'zustand/shallow';
20
+
21
+ import type { EpiDashboardGeneralSettings } from '../../../stores/userProfileStore';
22
+ import { userProfileStore } from '../../../stores/userProfileStore';
23
+ import { Switch } from '../../form/fields/Switch';
24
+
25
+ export type EpiDashboardGeneralSettingsFormProps = {
26
+ readonly onReset: () => void;
27
+ };
28
+
29
+ export const EpiDashboardGeneralSettingsForm = ({ onReset }: EpiDashboardGeneralSettingsFormProps) => {
30
+ const { t } = useTranslation();
31
+
32
+ const resetEpiDashboardGeneralSettings = useStore(userProfileStore, useShallow((state) => state.resetEpiDashboardGeneralSettings));
33
+ const epiDashboardGeneralSettings = useStore(userProfileStore, useShallow((state) => state.epiDashboardGeneralSettings));
34
+ const setEpiDashboardGeneralSettings = useStore(userProfileStore, useShallow((state) => state.setEpiDashboardGeneralSettings));
35
+
36
+ const formMethods = useForm<EpiDashboardGeneralSettings>({
37
+ defaultValues: epiDashboardGeneralSettings,
38
+ values: epiDashboardGeneralSettings,
39
+ });
40
+ const { control } = formMethods;
41
+
42
+ const formValues = useWatch({ control });
43
+
44
+ const onResetButtonClick = useCallback(() => {
45
+ resetEpiDashboardGeneralSettings();
46
+ if (onReset) {
47
+ onReset();
48
+ }
49
+ }, [onReset, resetEpiDashboardGeneralSettings]);
50
+
51
+ useEffect(() => {
52
+ setEpiDashboardGeneralSettings(formValues as EpiDashboardGeneralSettings);
53
+ }, [formValues, setEpiDashboardGeneralSettings]);
54
+
55
+ return (
56
+ <FormProvider {...formMethods}>
57
+ <form
58
+ autoComplete={'off'}
59
+ onSubmit={noop}
60
+ >
61
+ <Box marginY={1}>
62
+ <FormGroup>
63
+ <Switch<EpiDashboardGeneralSettings>
64
+ label={t`Enable highlighting across widgets`}
65
+ name={'isHighlightingEnabled'}
66
+ />
67
+ </FormGroup>
68
+ </Box>
69
+ </form>
70
+ <Box
71
+ sx={{
72
+ display: 'flex',
73
+ justifyContent: 'flex-end',
74
+ }}
75
+ >
76
+ <Box marginX={1}>
77
+ <Button
78
+ color={'primary'}
79
+ startIcon={<RestartAltIcon />}
80
+ variant={'outlined'}
81
+ onClick={onResetButtonClick}
82
+ >
83
+ {t`Reset general settings`}
84
+ </Button>
85
+ </Box>
86
+ </Box>
87
+ </FormProvider>
88
+ );
89
+ };