@gen-epix/ui 1.14.4 → 1.15.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +3 -3
- package/dist/index.js +27287 -27948
- package/package.json +94 -84
- package/src/@types/environment.d.ts +54 -0
- package/src/api/api.ts +43576 -0
- package/src/api/base.ts +111 -0
- package/src/api/common.ts +168 -0
- package/src/api/configuration.ts +118 -0
- package/src/api/index.ts +20 -0
- package/src/assets/icons/CollectionIcon.svg +1 -0
- package/src/assets/icons/DnaIcon.svg +1 -0
- package/src/assets/icons/VirusIcon.svg +1 -0
- package/src/assets/logo/logo-rijksoverheid.svg +42 -0
- package/src/assets/logo/logo-rivm.svg +6 -0
- package/src/classes/Subject/Subject.ts +26 -0
- package/src/classes/Subject/index.ts +1 -0
- package/src/classes/TableEventBus/TableEventBus.ts +14 -0
- package/src/classes/TableEventBus/index.ts +1 -0
- package/src/classes/abstracts/EventBusAbstract/EventBusAbstract.ts +37 -0
- package/src/classes/abstracts/EventBusAbstract/index.ts +1 -0
- package/src/classes/abstracts/FilterAbstract/FilterAbstract.ts +54 -0
- package/src/classes/abstracts/FilterAbstract/index.ts +1 -0
- package/src/classes/abstracts/SubscribableAbstract/SubscribableAbstract.ts +20 -0
- package/src/classes/abstracts/SubscribableAbstract/index.ts +1 -0
- package/src/classes/errors/UploadError.ts +11 -0
- package/src/classes/errors/index.ts +1 -0
- package/src/classes/filters/BooleanFilter.ts +31 -0
- package/src/classes/filters/DateFilter.ts +133 -0
- package/src/classes/filters/GeoFilter.ts +60 -0
- package/src/classes/filters/MultiSelectFilter.ts +70 -0
- package/src/classes/filters/NumberRangeFilter.ts +82 -0
- package/src/classes/filters/SelectionFilter.ts +25 -0
- package/src/classes/filters/TextFilter.ts +36 -0
- package/src/classes/filters/TreeFilter.ts +22 -0
- package/src/classes/managers/AuthenticationManager/AuthenticationManager.ts +94 -0
- package/src/classes/managers/AuthenticationManager/index.ts +1 -0
- package/src/classes/managers/AuthorizationManager/AuthorizationManager.ts +70 -0
- package/src/classes/managers/AuthorizationManager/index.ts +1 -0
- package/src/classes/managers/BackendVersionManager/BackendVersionManager.ts +23 -0
- package/src/classes/managers/BackendVersionManager/index.ts +1 -0
- package/src/classes/managers/BreadcrumbManager/BreadcrumbManager.ts +30 -0
- package/src/classes/managers/BreadcrumbManager/index.ts +1 -0
- package/src/classes/managers/ConfigManager/ConfigManager.ts +31 -0
- package/src/classes/managers/ConfigManager/index.ts +1 -0
- package/src/classes/managers/DevicePixelRatioManager/DevicePixelRatioManager.ts +27 -0
- package/src/classes/managers/DevicePixelRatioManager/index.ts +1 -0
- package/src/classes/managers/EmotionCacheManager/EmotionCacheManager.ts +27 -0
- package/src/classes/managers/EmotionCacheManager/index.ts +1 -0
- package/src/classes/managers/EpiDataManager/EpiDataManager.ts +196 -0
- package/src/classes/managers/EpiDataManager/index.ts +1 -0
- package/src/classes/managers/EpiEventBusManager/EpiEventBusManager.ts +61 -0
- package/src/classes/managers/EpiEventBusManager/index.ts +1 -0
- package/src/classes/managers/EpiHighlightingManager/EpiHighlightingManager.ts +32 -0
- package/src/classes/managers/EpiHighlightingManager/index.ts +1 -0
- package/src/classes/managers/EpiLineListCaseSetMembersManager/EpiListsCaseSetMembersManager.ts +118 -0
- package/src/classes/managers/EpiLineListCaseSetMembersManager/index.ts +1 -0
- package/src/classes/managers/FeatureFlagsManager/FeatureFlagsManager.ts +30 -0
- package/src/classes/managers/FeatureFlagsManager/index.ts +1 -0
- package/src/classes/managers/I18nManager/I18nManager.ts +105 -0
- package/src/classes/managers/I18nManager/index.ts +1 -0
- package/src/classes/managers/InactivityManager/InactivityManager.ts +119 -0
- package/src/classes/managers/InactivityManager/index.ts +1 -0
- package/src/classes/managers/KeyboardShortcutManager/KeyboardShortcutManager.ts +78 -0
- package/src/classes/managers/KeyboardShortcutManager/index.ts +1 -0
- package/src/classes/managers/LogManager/LogManager.ts +151 -0
- package/src/classes/managers/LogManager/index.ts +1 -0
- package/src/classes/managers/NavigationHistoryManager/NavigationHistoryManager.ts +16 -0
- package/src/classes/managers/NavigationHistoryManager/index.ts +1 -0
- package/src/classes/managers/NotificationManager/NotificationManager.ts +104 -0
- package/src/classes/managers/NotificationManager/index.ts +1 -0
- package/src/classes/managers/PageEventBusManager/PageEventBusManager.ts +116 -0
- package/src/classes/managers/PageEventBusManager/index.ts +1 -0
- package/src/classes/managers/QueryClientManager/QueryClientManager.ts +51 -0
- package/src/classes/managers/QueryClientManager/index.ts +1 -0
- package/src/classes/managers/RouterManager/RouterManager.ts +25 -0
- package/src/classes/managers/RouterManager/index.ts +1 -0
- package/src/classes/managers/UserSettingsManager/UserSettingsManager.ts +16 -0
- package/src/classes/managers/UserSettingsManager/index.ts +1 -0
- package/src/classes/managers/WindowManager/WindowManager.test.ts +23 -0
- package/src/classes/managers/WindowManager/WindowManager.ts +26 -0
- package/src/classes/managers/WindowManager/index.ts +1 -0
- package/src/components/app/App/App.tsx +58 -0
- package/src/components/app/App/index.ts +1 -0
- package/src/components/app/ApplicationBootstrap/ApplicationBootstrap.tsx +223 -0
- package/src/components/app/ApplicationBootstrap/index.ts +1 -0
- package/src/components/app/RouterRoot/RouterRoot.tsx +187 -0
- package/src/components/app/RouterRoot/index.ts +1 -0
- package/src/components/epi/EpiAddCasesToEventDialog/EpiAddCasesToEventDialog.tsx +347 -0
- package/src/components/epi/EpiAddCasesToEventDialog/EpiAddCasesToEventDialogSuccessNotificationMessage.tsx +38 -0
- package/src/components/epi/EpiAddCasesToEventDialog/index.ts +1 -0
- package/src/components/epi/EpiBulkEditCaseDialog/EpiBulkEditCaseDialog.tsx +61 -0
- package/src/components/epi/EpiBulkEditCaseDialog/index.ts +1 -0
- package/src/components/epi/EpiCaseInfoDialog/EpiCaseCaseSetInfo.tsx +137 -0
- package/src/components/epi/EpiCaseInfoDialog/EpiCaseContent.tsx +127 -0
- package/src/components/epi/EpiCaseInfoDialog/EpiCaseForm.tsx +111 -0
- package/src/components/epi/EpiCaseInfoDialog/EpiCaseInfoDialog.tsx +377 -0
- package/src/components/epi/EpiCaseInfoDialog/EpiCaseSharingForm.tsx +140 -0
- package/src/components/epi/EpiCaseInfoDialog/EpiCaseSharingInfo.tsx +23 -0
- package/src/components/epi/EpiCaseInfoDialog/EpiReadOnlyCaseContent.tsx +89 -0
- package/src/components/epi/EpiCaseInfoDialog/index.ts +1 -0
- package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetContent.tsx +108 -0
- package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetDescription.tsx +34 -0
- package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetForm.tsx +151 -0
- package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetInfoDialog.tsx +389 -0
- package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetSharingForm.tsx +155 -0
- package/src/components/epi/EpiCaseSetInfoDialog/EpiCaseSetSharingInfo.tsx +23 -0
- package/src/components/epi/EpiCaseSetInfoDialog/index.ts +1 -0
- package/src/components/epi/EpiCaseSummary/EpiCaseSummary.tsx +141 -0
- package/src/components/epi/EpiCaseSummary/index.ts +1 -0
- package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoAccessRights.tsx +91 -0
- package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoColAccessRights.tsx +118 -0
- package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoData.tsx +38 -0
- package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoDialog.tsx +39 -0
- package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoDialogContent.tsx +169 -0
- package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoDialogWithLoader.tsx +42 -0
- package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoRegions.tsx +87 -0
- package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoTrees.tsx +73 -0
- package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoValues.tsx +61 -0
- package/src/components/epi/EpiCaseTypeInfoDialog/EpiCaseTypeInfoVariableDetails.tsx +151 -0
- package/src/components/epi/EpiCaseTypeInfoDialog/index.ts +10 -0
- package/src/components/epi/EpiCasesAlreadyInCaseSetWarning/EpiCasesAlreadyInCaseSetWarning.tsx +190 -0
- package/src/components/epi/EpiCasesAlreadyInCaseSetWarning/EpiCasesAlreadyInCaseSetWarningCaseSetLink.tsx +62 -0
- package/src/components/epi/EpiCasesAlreadyInCaseSetWarning/index.ts +1 -0
- package/src/components/epi/EpiCompletCaseTypeLoader/EpiCompletCaseTypeLoader.tsx +87 -0
- package/src/components/epi/EpiCompletCaseTypeLoader/index.ts +1 -0
- package/src/components/epi/EpiContactDetailsDialog/EpiContactDetailsDialog.tsx +151 -0
- package/src/components/epi/EpiContactDetailsDialog/index.ts +1 -0
- package/src/components/epi/EpiContextMenu/EpiContextMenu.tsx +155 -0
- package/src/components/epi/EpiContextMenu/index.ts +1 -0
- package/src/components/epi/EpiCreateEventDialog/EpiCreateEventDialog.tsx +386 -0
- package/src/components/epi/EpiCreateEventDialog/EpiCreateEventDialogSuccessNotificationMessage.tsx +30 -0
- package/src/components/epi/EpiCreateEventDialog/index.ts +1 -0
- package/src/components/epi/EpiCurve/EpiCurve.tsx +525 -0
- package/src/components/epi/EpiCurve/index.ts +1 -0
- package/src/components/epi/EpiCustomTabPanel/EpiCustomTabPanel.tsx +27 -0
- package/src/components/epi/EpiCustomTabPanel/index.ts +1 -0
- package/src/components/epi/EpiDashboard/EpiDashboard.tsx +390 -0
- package/src/components/epi/EpiDashboard/EpiDashboardDownloadSidebarItem.tsx +154 -0
- package/src/components/epi/EpiDashboard/EpiDashboardGeneralSettingsForm.tsx +89 -0
- package/src/components/epi/EpiDashboard/EpiDashboardLayoutRenderer.tsx +248 -0
- package/src/components/epi/EpiDashboard/EpiDashboardLayoutSettingsForm.tsx +160 -0
- package/src/components/epi/EpiDashboard/EpiDashboardSettingsSidebarItem.tsx +93 -0
- package/src/components/epi/EpiDashboard/EpiDashboardTreeSettingsForm.tsx +90 -0
- package/src/components/epi/EpiDashboard/index.ts +1 -0
- package/src/components/epi/EpiDashboardStoreLoader/EpiDashboardStoreLoader.tsx +34 -0
- package/src/components/epi/EpiDashboardStoreLoader/EpiDashboardStoreLoaderContent.tsx +73 -0
- package/src/components/epi/EpiDashboardStoreLoader/index.ts +2 -0
- package/src/components/epi/EpiDashboardStoreLoader/withEpiDashboardStore.tsx +19 -0
- package/src/components/epi/EpiDataCollectionAccessInfo/EpiDataCollectionAccessInfo.tsx +88 -0
- package/src/components/epi/EpiDataCollectionAccessInfo/index.ts +1 -0
- package/src/components/epi/EpiFindSimilarCasesDialog/EpiFindSimilarCasesDialog.tsx +302 -0
- package/src/components/epi/EpiFindSimilarCasesDialog/index.ts +1 -0
- package/src/components/epi/EpiLegendaItem/EpiLegendaItem.tsx +106 -0
- package/src/components/epi/EpiLegendaItem/index.ts +1 -0
- package/src/components/epi/EpiLineList/EpiLineList.tsx +492 -0
- package/src/components/epi/EpiLineList/EpiLineListPrimaryMenu.tsx +189 -0
- package/src/components/epi/EpiLineList/EpiLineListSecondaryMenu.tsx +56 -0
- package/src/components/epi/EpiLineList/EpiLineListTitle.tsx +28 -0
- package/src/components/epi/EpiLineList/index.ts +1 -0
- package/src/components/epi/EpiLineList/useEpiLineListEmitDownloadOptions.tsx +102 -0
- package/src/components/epi/EpiMap/EpiMap.tsx +547 -0
- package/src/components/epi/EpiMap/index.ts +1 -0
- package/src/components/epi/EpiRemoveCasesFromEventDialog/EpiRemoveCasesFromEventDialog.tsx +169 -0
- package/src/components/epi/EpiRemoveCasesFromEventDialog/index.ts +1 -0
- package/src/components/epi/EpiRemoveFindSimilarCasesResultDialog/EpiRemoveFindSimilarCasesResultDialog.tsx +216 -0
- package/src/components/epi/EpiSequenceDownloadDialog/EpiSequenceDownloadDialog.tsx +151 -0
- package/src/components/epi/EpiSequenceDownloadDialog/index.ts +1 -0
- package/src/components/epi/EpiStratification/EpiStratification.tsx +241 -0
- package/src/components/epi/EpiStratification/index.ts +1 -0
- package/src/components/epi/EpiTree/EpiTree.tsx +906 -0
- package/src/components/epi/EpiTree/index.ts +1 -0
- package/src/components/epi/EpiTreeDescription/EpiTreeDescription.tsx +71 -0
- package/src/components/epi/EpiTreeDescription/index.ts +1 -0
- package/src/components/epi/EpiUpload/EpiUpload.tsx +107 -0
- package/src/components/epi/EpiUpload/EpiUploadCaseResultTable.tsx +383 -0
- package/src/components/epi/EpiUpload/EpiUploadCreateCases.tsx +266 -0
- package/src/components/epi/EpiUpload/EpiUploadMapColumns.tsx +261 -0
- package/src/components/epi/EpiUpload/EpiUploadMapSequences.tsx +332 -0
- package/src/components/epi/EpiUpload/EpiUploadNavigation.tsx +52 -0
- package/src/components/epi/EpiUpload/EpiUploadSelectFile.tsx +285 -0
- package/src/components/epi/EpiUpload/EpiUploadSelectSequenceFiles.tsx +375 -0
- package/src/components/epi/EpiUpload/EpiUploadValidate.tsx +199 -0
- package/src/components/epi/EpiUpload/EpiUploadValidateNavigation.tsx +34 -0
- package/src/components/epi/EpiUpload/index.ts +1 -0
- package/src/components/epi/EpiUserRightsDialog/EpiUserRightsDialog.tsx +101 -0
- package/src/components/epi/EpiUserRightsDialog/EpiUserRightsDialogCaseAccessPolicy.tsx +160 -0
- package/src/components/epi/EpiUserRightsDialog/index.ts +1 -0
- package/src/components/epi/EpiWarning/EpiWarning.tsx +39 -0
- package/src/components/epi/EpiWarning/index.ts +1 -0
- package/src/components/epi/EpiWidget/EpiWidget.tsx +255 -0
- package/src/components/epi/EpiWidget/index.ts +1 -0
- package/src/components/epi/EpiWidgetHeaderIconButton/EpiWidgetHeaderIconButton.tsx +40 -0
- package/src/components/epi/EpiWidgetHeaderIconButton/index.ts +1 -0
- package/src/components/epi/EpiWidgetMenu/EpiWidgetMenu.tsx +56 -0
- package/src/components/epi/EpiWidgetMenu/index.ts +1 -0
- package/src/components/epi/EpiWidgetUnavailable/EpiWidgetUnavailable.tsx +51 -0
- package/src/components/epi/EpiWidgetUnavailable/index.ts +1 -0
- package/src/components/filters/BooleanFilterField/BooleanFilterField.tsx +26 -0
- package/src/components/filters/BooleanFilterField/index.ts +1 -0
- package/src/components/filters/DateFilterField/DateFilterField.tsx +23 -0
- package/src/components/filters/DateFilterField/index.ts +1 -0
- package/src/components/filters/GeoFilterField/GeoFilterField.tsx +32 -0
- package/src/components/filters/GeoFilterField/index.ts +1 -0
- package/src/components/filters/MultiSelectFilterField/MultiSelectFilterField.tsx +31 -0
- package/src/components/filters/MultiSelectFilterField/index.ts +1 -0
- package/src/components/filters/NumberRangeFilterField/NumberRangeFilterField.tsx +20 -0
- package/src/components/filters/NumberRangeFilterField/index.ts +1 -0
- package/src/components/filters/TextFilterField/TextFilterField.tsx +18 -0
- package/src/components/filters/TextFilterField/index.ts +1 -0
- package/src/components/form/fields/Autocomplete/Autocomplete.tsx +270 -0
- package/src/components/form/fields/Autocomplete/index.ts +1 -0
- package/src/components/form/fields/CheckboxGroup/CheckboxGroup.tsx +192 -0
- package/src/components/form/fields/CheckboxGroup/index.ts +1 -0
- package/src/components/form/fields/DatePicker/DatePicker.tsx +167 -0
- package/src/components/form/fields/DatePicker/index.ts +1 -0
- package/src/components/form/fields/DateRangePicker/DateRangePicker.tsx +359 -0
- package/src/components/form/fields/DateRangePicker/index.ts +1 -0
- package/src/components/form/fields/NumberField/NumberField.tsx +277 -0
- package/src/components/form/fields/NumberField/index.ts +1 -0
- package/src/components/form/fields/NumberRangeInput/NumberRangeInput.tsx +297 -0
- package/src/components/form/fields/NumberRangeInput/index.ts +1 -0
- package/src/components/form/fields/RadioGroup/RadioGroup.tsx +130 -0
- package/src/components/form/fields/RadioGroup/index.ts +1 -0
- package/src/components/form/fields/RichTextEditor/RichTextEditor.tsx +321 -0
- package/src/components/form/fields/RichTextEditor/RichTextEditorContent.tsx +34 -0
- package/src/components/form/fields/RichTextEditor/index.ts +2 -0
- package/src/components/form/fields/RichTextEditor/useRichTextEditorExtensions.ts +174 -0
- package/src/components/form/fields/Select/Select.tsx +219 -0
- package/src/components/form/fields/Select/index.ts +1 -0
- package/src/components/form/fields/Switch/Switch.tsx +116 -0
- package/src/components/form/fields/Switch/index.ts +1 -0
- package/src/components/form/fields/TextField/TextField.tsx +170 -0
- package/src/components/form/fields/TextField/index.ts +1 -0
- package/src/components/form/fields/ToggleButtonGroup/ToggleButtonGroup.tsx +118 -0
- package/src/components/form/fields/ToggleButtonGroup/index.ts +1 -0
- package/src/components/form/fields/TransferList/TransferList.tsx +360 -0
- package/src/components/form/fields/TransferList/index.ts +1 -0
- package/src/components/form/fields/UploadButton/UploadButton.tsx +157 -0
- package/src/components/form/helpers/FormFieldHelperText/FormFieldHelperText.tsx +68 -0
- package/src/components/form/helpers/FormFieldHelperText/index.ts +1 -0
- package/src/components/form/helpers/FormFieldLoadingIndicator/FormFieldLoadingIndicator.tsx +22 -0
- package/src/components/form/helpers/FormFieldLoadingIndicator/index.ts +1 -0
- package/src/components/form/helpers/GenericForm/GenericForm.tsx +187 -0
- package/src/components/form/helpers/GenericForm/index.ts +1 -0
- package/src/components/ui/ApplicationBar/ApplicationBar.tsx +74 -0
- package/src/components/ui/ApplicationBar/ApplicationBarActions.tsx +124 -0
- package/src/components/ui/ApplicationBar/ApplicationBarActionsFeedbackItem.tsx +102 -0
- package/src/components/ui/ApplicationBar/ApplicationBarActionsInfotem.tsx +60 -0
- package/src/components/ui/ApplicationBar/ApplicationBarActionsNotificationsItem.tsx +82 -0
- package/src/components/ui/ApplicationBar/ApplicationBarActionsOrganizationSwitcherItem.tsx +58 -0
- package/src/components/ui/ApplicationBar/ApplicationBarActionsOutagesItem.tsx +75 -0
- package/src/components/ui/ApplicationBar/ApplicationBarActionsUserItem.tsx +60 -0
- package/src/components/ui/ApplicationBar/ApplicationBarNavigationMenu.tsx +159 -0
- package/src/components/ui/ApplicationBar/InfoMenu.tsx +120 -0
- package/src/components/ui/ApplicationBar/UserMenu.tsx +208 -0
- package/src/components/ui/ApplicationBar/UserOrganizationAdminMenuItem.tsx +69 -0
- package/src/components/ui/ApplicationBar/UserOwnOrganizationMenuItem.tsx +54 -0
- package/src/components/ui/ApplicationBar/index.ts +1 -0
- package/src/components/ui/ApplicationFooter/ApplicationFooter.tsx +121 -0
- package/src/components/ui/ApplicationFooter/ApplicationFooterLink.tsx +48 -0
- package/src/components/ui/ApplicationFooter/ApplicationFooterLinkSection.tsx +56 -0
- package/src/components/ui/ApplicationFooter/index.ts +1 -0
- package/src/components/ui/AuthenticationWrapper/AuthenticationWrapper.tsx +208 -0
- package/src/components/ui/AuthenticationWrapper/index.ts +1 -0
- package/src/components/ui/AuthorizationWrapper/AuthorizationWrapper.tsx +75 -0
- package/src/components/ui/AuthorizationWrapper/index.ts +1 -0
- package/src/components/ui/Breadcrumbs/Breadcrumbs.tsx +92 -0
- package/src/components/ui/Breadcrumbs/index.ts +1 -0
- package/src/components/ui/Confirmation/Confirmation.tsx +10 -0
- package/src/components/ui/Confirmation/ConfirmationRender.tsx +81 -0
- package/src/components/ui/Confirmation/index.ts +2 -0
- package/src/components/ui/ConsentDialog/ConsentDialog.tsx +57 -0
- package/src/components/ui/ConsentDialog/index.ts +1 -0
- package/src/components/ui/CopyToClipboardButton/CopyToClipboardButton.tsx +94 -0
- package/src/components/ui/CopyToClipboardButton/index.ts +1 -0
- package/src/components/ui/Dialog/Dialog.tsx +196 -0
- package/src/components/ui/Dialog/index.ts +1 -0
- package/src/components/ui/FileSelector/FileSelector.tsx +358 -0
- package/src/components/ui/FileSelector/index.ts +1 -0
- package/src/components/ui/GenericErrorMessage/GenericErrorMessage.tsx +168 -0
- package/src/components/ui/GenericErrorMessage/index.ts +1 -0
- package/src/components/ui/HomePageTrends/HomePageTrendCard.tsx +132 -0
- package/src/components/ui/HomePageTrends/HomePageTrends.tsx +312 -0
- package/src/components/ui/HomePageTrends/index.ts +1 -0
- package/src/components/ui/LicensesDialog/LicensesDialog.tsx +231 -0
- package/src/components/ui/LicensesDialog/index.ts +1 -0
- package/src/components/ui/LinearProgressWithLabel/LinearProgressWithLabel.tsx +31 -0
- package/src/components/ui/LinearProgressWithLabel/index.ts +1 -0
- package/src/components/ui/LoadingIndicator/LoadingIndicator.tsx +11 -0
- package/src/components/ui/LoadingIndicator/index.ts +1 -0
- package/src/components/ui/MyPermissionsDialog/MyPermissionsDialog.tsx +95 -0
- package/src/components/ui/MyPermissionsDialog/index.ts +1 -0
- package/src/components/ui/NavLink/NavLink.tsx +47 -0
- package/src/components/ui/NavLink/index.ts +1 -0
- package/src/components/ui/NestedMenu/IconMenuItem.tsx +64 -0
- package/src/components/ui/NestedMenu/NestedDropdown.tsx +133 -0
- package/src/components/ui/NestedMenu/NestedMenuItem.tsx +250 -0
- package/src/components/ui/NestedMenu/index.ts +4 -0
- package/src/components/ui/NestedMenu/nestedMenuItemsFromObject.tsx +98 -0
- package/src/components/ui/Notifications/NotificationItem.tsx +70 -0
- package/src/components/ui/Notifications/NotificationsDrawer.tsx +161 -0
- package/src/components/ui/Notifications/NotificationsStack.tsx +45 -0
- package/src/components/ui/Notifications/index.ts +2 -0
- package/src/components/ui/OrganizationSwitcherDialog/OrganizationSwitcherDialog.tsx +204 -0
- package/src/components/ui/OrganizationSwitcherDialog/index.ts +1 -0
- package/src/components/ui/OutageList/OutageItem.tsx +48 -0
- package/src/components/ui/OutageList/OutageList.tsx +54 -0
- package/src/components/ui/OutageList/OutageSection.tsx +39 -0
- package/src/components/ui/OutageList/index.ts +1 -0
- package/src/components/ui/OutagesDialog/OutagesDialog.tsx +71 -0
- package/src/components/ui/OutagesDialog/index.ts +1 -0
- package/src/components/ui/PageContainer/PageContainer.tsx +207 -0
- package/src/components/ui/PageContainer/index.ts +1 -0
- package/src/components/ui/PanelSeparator/PanelResizeHandle.tsx +67 -0
- package/src/components/ui/PanelSeparator/index.ts +1 -0
- package/src/components/ui/ResponseHandler/ResponseHandler.tsx +79 -0
- package/src/components/ui/ResponseHandler/index.ts +1 -0
- package/src/components/ui/Sidebar/SidebarItem.tsx +138 -0
- package/src/components/ui/Sidebar/SidebarMenu.tsx +33 -0
- package/src/components/ui/Sidebar/SidebarMenuItem.tsx +61 -0
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- package/src/utils/CaseSelectionUtil/CaseSelectionUtil.ts +32 -0
- package/src/utils/CaseSelectionUtil/index.ts +1 -0
- package/src/utils/CaseSetUtil/CaseSetUtil.ts +13 -0
- package/src/utils/CaseSetUtil/index.ts +1 -0
- package/src/utils/CaseTypeUtil/CaseTypeUtil.ts +178 -0
- package/src/utils/CaseTypeUtil/index.ts +1 -0
- package/src/utils/CaseUtil/CaseUtil.ts +401 -0
- package/src/utils/CaseUtil/index.ts +1 -0
- package/src/utils/DashboardUtil/DashboardUtil.ts +46 -0
- package/src/utils/DashboardUtil/index.ts +1 -0
- package/src/utils/DataHookUtil/DataHookUtil.ts +137 -0
- package/src/utils/DataHookUtil/index.ts +1 -0
- package/src/utils/DataSetUtil/DataSetUtil.ts +70 -0
- package/src/utils/DataSetUtil/index.ts +1 -0
- package/src/utils/DataUtil/DataUtil.ts +84 -0
- package/src/utils/DataUtil/index.ts +1 -0
- package/src/utils/DownloadUtil/DownloadUtil.ts +237 -0
- package/src/utils/DownloadUtil/index.ts +1 -0
- package/src/utils/EffectiveRightsUtil/EffectiveRightsUtil.ts +142 -0
- package/src/utils/EffectiveRightsUtil/index.ts +1 -0
- package/src/utils/EpiCurveUtil/EpiCurveUtil.ts +180 -0
- package/src/utils/EpiCurveUtil/index.ts +1 -0
- package/src/utils/EpiFilterUtil/EpiFilterUtil.ts +232 -0
- package/src/utils/EpiFilterUtil/index.ts +1 -0
- package/src/utils/EpiLineListUtil/EpiLineListUtil.ts +15 -0
- package/src/utils/EpiLineListUtil/index.ts +1 -0
- package/src/utils/EpiMapUtil/EpiMapUtil.test.ts +54 -0
- package/src/utils/EpiMapUtil/EpiMapUtil.ts +80 -0
- package/src/utils/EpiMapUtil/index.ts +1 -0
- package/src/utils/EpiTreeUtil/EpiTreeUtil.test.ts +2467 -0
- package/src/utils/EpiTreeUtil/EpiTreeUtil.ts +1055 -0
- package/src/utils/EpiTreeUtil/index.ts +1 -0
- package/src/utils/EpiUploadUtil/EpiUploadUtil.ts +857 -0
- package/src/utils/EpiUploadUtil/index.ts +1 -0
- package/src/utils/FileUtil/FileUtil.ts +22 -0
- package/src/utils/FileUtil/index.ts +1 -0
- package/src/utils/FormUtil/FormUtil.test.ts +36 -0
- package/src/utils/FormUtil/FormUtil.ts +63 -0
- package/src/utils/FormUtil/index.ts +1 -0
- package/src/utils/MenuDataUtil/MenuDataUtil.ts +54 -0
- package/src/utils/MenuDataUtil/index.ts +1 -0
- package/src/utils/NewickUtil/NewickUtil.test.ts +187 -0
- package/src/utils/NewickUtil/NewickUtil.ts +69 -0
- package/src/utils/NewickUtil/index.ts +1 -0
- package/src/utils/NotificationUtil/NotificationUtil.ts +28 -0
- package/src/utils/NotificationUtil/index.ts +1 -0
- package/src/utils/NumberUtil/NumberUtil.test.ts +113 -0
- package/src/utils/NumberUtil/NumberUtil.ts +67 -0
- package/src/utils/NumberUtil/index.ts +1 -0
- package/src/utils/ObjectUtil/ObjectUtil.test.ts +43 -0
- package/src/utils/ObjectUtil/ObjectUtil.ts +28 -0
- package/src/utils/ObjectUtil/index.ts +1 -0
- package/src/utils/OutageUtil/OutageUtil.test.ts +108 -0
- package/src/utils/OutageUtil/OutageUtil.ts +81 -0
- package/src/utils/OutageUtil/index.ts +1 -0
- package/src/utils/QueryUtil/QueryUtil.test.ts +42 -0
- package/src/utils/QueryUtil/QueryUtil.ts +105 -0
- package/src/utils/QueryUtil/index.ts +1 -0
- package/src/utils/StringUtil/StringUtil.test.ts +61 -0
- package/src/utils/StringUtil/StringUtil.ts +91 -0
- package/src/utils/StringUtil/index.ts +1 -0
- package/src/utils/TableUtil/TableUtil.ts +665 -0
- package/src/utils/TableUtil/index.ts +1 -0
- package/src/utils/TestIdUtil/TestIdUtil.test.ts +12 -0
- package/src/utils/TestIdUtil/TestIdUtil.ts +13 -0
- package/src/utils/TestIdUtil/index.ts +1 -0
- package/src/utils/TimeUtil/TimeUtil.ts +38 -0
- package/src/utils/TimeUtil/index.ts +1 -0
- package/src/utils/UserManagerUtil/UserManagerUtil.test.ts +41 -0
- package/src/utils/UserManagerUtil/UserManagerUtil.ts +39 -0
- package/src/utils/UserManagerUtil/index.ts +1 -0
- package/src/utils/ValidationUtil/ValidationUtil.test.ts +61 -0
- package/src/utils/ValidationUtil/ValidationUtil.ts +56 -0
- package/src/utils/ValidationUtil/index.ts +1 -0
- package/dist/environment.d.ts +0 -54
- package/dist/index.d.ts +0 -16074
- /package/{dist → src/@types}/mui.d.ts +0 -0
- /package/{dist → src/@types}/ui.d.ts +0 -0
- /package/{dist → src/@types}/vite-env.d.ts +0 -0
- /package/{dist → src/@types}/yup.d.ts +0 -0
- /package/{dist → src}/locale/en.json +0 -0
- /package/{dist → src}/locale/nl.json +0 -0
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import type { UseQueryResult } from '@tanstack/react-query';
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import { useMemo } from 'react';
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import type { CaseType } from '../../api';
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import { CaseApi } from '../../api';
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import type {
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UseMap,
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UseOptions,
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} from '../../models/dataHooks';
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import { QUERY_KEY } from '../../models/query';
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import { DataHookUtil } from '../../utils/DataHookUtil';
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import { QueryUtil } from '../../utils/QueryUtil';
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import { useQueryMemo } from '../../hooks/useQueryMemo';
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export const caseTypesQueryFn = async ({ signal }: { signal: AbortSignal }): Promise<CaseType[]> => {
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const response = await CaseApi.instance.caseTypesGetAll({ signal });
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return items;
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};
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export const useCaseTypesQuery = (): UseQueryResult<CaseType[]> => {
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return useQueryMemo({
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queryKey: QueryUtil.getGenericKey(QUERY_KEY.CASE_TYPES),
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queryFn: caseTypesQueryFn,
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});
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};
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export const useCaseTypeMapQuery = (): UseMap<CaseType> => {
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const response = useCaseTypesQuery();
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return useMemo(() => {
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return DataHookUtil.createUseMapDataHook<CaseType>(response, item => item.id);
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}, [response]);
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};
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export const useCaseTypeOptionsQuery = (): UseOptions<string> => {
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const response = useCaseTypesQuery();
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return useMemo(() => {
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return DataHookUtil.createUseOptionsDataHook<CaseType>(response, item => item.id, item => item.name);
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}, [response]);
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};
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export * from './useColSetMembersQuery';
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import type { UseQueryResult } from '@tanstack/react-query';
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import type { ColSetMember } from '../../api';
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import { CaseApi } from '../../api';
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import { QUERY_KEY } from '../../models/query';
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import { QueryUtil } from '../../utils/QueryUtil';
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import { useQueryMemo } from '../../hooks/useQueryMemo';
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export const useColSetMembersQuery = (): UseQueryResult<ColSetMember[]> => {
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return useQueryMemo({
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queryKey: QueryUtil.getGenericKey(QUERY_KEY.COL_SET_MEMBERS),
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queryFn: async ({ signal }) => {
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const response = await CaseApi.instance.colSetMembersGetAll({ signal });
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return response.data;
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},
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});
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export * from './useColSetsQuery';
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import type { UseQueryResult } from '@tanstack/react-query';
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import { useMemo } from 'react';
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import type { ColSet } from '../../api';
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import { CaseApi } from '../../api';
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import type {
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UseMap,
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UseOptions,
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} from '../../models/dataHooks';
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import { QUERY_KEY } from '../../models/query';
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import { DataHookUtil } from '../../utils/DataHookUtil';
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import { QueryUtil } from '../../utils/QueryUtil';
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import { useQueryMemo } from '../../hooks/useQueryMemo';
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export const useColSetsQuery = (): UseQueryResult<ColSet[]> => {
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return useQueryMemo({
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queryKey: QueryUtil.getGenericKey(QUERY_KEY.COL_SETS),
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queryFn: async ({ signal }) => {
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const response = await CaseApi.instance.colSetsGetAll({ signal });
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},
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});
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};
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export const useColSetMapQuery = (): UseMap<ColSet> => {
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const response = useColSetsQuery();
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return useMemo(() => {
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return DataHookUtil.createUseMapDataHook<ColSet>(response, item => item.id);
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}, [response]);
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};
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export const useColSetOptionsQuery = (): UseOptions<string> => {
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const response = useColSetsQuery();
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return useMemo(() => {
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return DataHookUtil.createUseOptionsDataHook<ColSet>(response, item => item.id, item => item.name);
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}, [response]);
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};
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export * from './useColTypesQuery';
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import { useMemo } from 'react';
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import { ColType } from '../../api';
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import type { UseOptions } from '../../models/dataHooks';
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import type { OptionBase } from '../../models/form';
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export const colTypePresentationValues: Record<ColType, string> = {
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[ColType.TEXT]: 'TEXT',
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[ColType.CONTEXT_FREE_GRAMMAR_JSON]: 'CONTEXT_FREE_GRAMMAR_JSON',
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[ColType.CONTEXT_FREE_GRAMMAR_XML]: 'CONTEXT_FREE_GRAMMAR_XML',
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[ColType.REGULAR_LANGUAGE]: 'REGULAR_LANGUAGE',
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[ColType.NOMINAL]: 'NOMINAL',
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[ColType.ORDINAL]: 'ORDINAL',
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[ColType.INTERVAL]: 'INTERVAL',
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[ColType.TIME_DAY]: 'TIME_DAY',
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[ColType.TIME_WEEK]: 'TIME_WEEK',
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[ColType.TIME_MONTH]: 'TIME_MONTH',
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[ColType.TIME_QUARTER]: 'TIME_QUARTER',
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[ColType.TIME_YEAR]: 'TIME_YEAR',
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[ColType.GEO_LATLON]: 'GEO_LATLON',
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[ColType.GEO_REGION]: 'GEO_REGION',
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[ColType.ID_SAMPLE]: 'ID_SAMPLE',
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[ColType.ID_CASE]: 'ID_CASE',
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[ColType.ID_EVENT]: 'ID_EVENT',
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[ColType.ID_GENETIC_SEQUENCE]: 'ID_GENETIC_SEQUENCE',
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[ColType.ID_PERSON]: 'ID_PERSON',
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[ColType.DECIMAL_0]: 'DECIMAL_0',
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[ColType.DECIMAL_1]: 'DECIMAL_1',
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[ColType.DECIMAL_2]: 'DECIMAL_2',
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[ColType.DECIMAL_3]: 'DECIMAL_3',
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[ColType.DECIMAL_4]: 'DECIMAL_4',
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[ColType.DECIMAL_5]: 'DECIMAL_5',
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[ColType.DECIMAL_6]: 'DECIMAL_6',
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[ColType.GENETIC_SEQUENCE]: 'GENETIC_SEQUENCE',
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[ColType.GENETIC_DISTANCE]: 'GENETIC_DISTANCE',
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[ColType.ORGANIZATION]: 'ORGANIZATION',
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[ColType.GENETIC_READS]: 'GENETIC_READS',
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[ColType.GENETIC_PROFILE]: 'GENETIC_PROFILE',
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[ColType.OTHER]: 'OTHER',
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};
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export const useColTypeOptionsQuery = (): UseOptions<string> => {
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return useMemo(() => {
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const options: OptionBase<string>[] = Object.entries(colTypePresentationValues).map(([value, label]) => ({ value, label }));
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return {
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isLoading: false,
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options,
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error: null,
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} as UseOptions<string>;
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}, []);
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};
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export * from './useColsQuery';
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import type { UseQueryResult } from '@tanstack/react-query';
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import { useMemo } from 'react';
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import type { Col } from '../../api';
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import { CaseApi } from '../../api';
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import type {
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UseMap,
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UseNameFactory,
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UseOptions,
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} from '../../models/dataHooks';
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import { QUERY_KEY } from '../../models/query';
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import { DataHookUtil } from '../../utils/DataHookUtil';
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import { QueryUtil } from '../../utils/QueryUtil';
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import { useCaseTypeMapQuery } from '../useCaseTypesQuery';
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import { useQueryMemo } from '../../hooks/useQueryMemo';
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import { useDimMapQuery } from '../useDimsQuery';
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export const useColsQuery = (): UseQueryResult<Col[]> => {
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return useQueryMemo({
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queryKey: QueryUtil.getGenericKey(QUERY_KEY.COLS),
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queryFn: async ({ signal }) => {
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const response = await CaseApi.instance.colsGetAll({ signal });
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return response.data;
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},
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});
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};
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export const useColMapQuery = (): UseMap<Col> => {
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const response = useColsQuery();
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return useMemo(() => {
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return DataHookUtil.createUseMapDataHook<Col>(response, item => item.id);
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}, [response]);
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};
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export const useColNameFactory = (): UseNameFactory<Col> => {
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const caseTypeMapQuery = useCaseTypeMapQuery();
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const dimMapQuery = useDimMapQuery();
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return useMemo(() => {
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const getName = (item: Col) => {
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const caseTypeName = caseTypeMapQuery.map.get(item.case_type_id)?.name ?? item.case_type_id;
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const dimName = dimMapQuery.map.get(item.dim_id)?.label ?? item.dim_id;
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return `${caseTypeName} → ${dimName} → ${item.label}`;
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};
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return DataHookUtil.createUseNameFactoryHook(getName, [caseTypeMapQuery, dimMapQuery]);
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}, [dimMapQuery, caseTypeMapQuery]);
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};
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export const useColOptionsQuery = (): UseOptions<string> => {
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const response = useColsQuery();
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const colNameFactory = useColNameFactory();
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return useMemo(() => {
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return DataHookUtil.createUseOptionsDataHook<Col>(response, item => item.id, colNameFactory.getName, [colNameFactory]);
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}, [colNameFactory, response]);
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};
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export * from './useConceptQuery';
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import type { UseQueryResult } from '@tanstack/react-query';
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import { useMemo } from 'react';
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import type { Concept } from '../../api';
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import { OntologyApi } from '../../api';
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import type {
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UseMap,
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UseNameFactory,
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UseOptions,
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} from '../../models/dataHooks';
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import { QUERY_KEY } from '../../models/query';
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import { DataHookUtil } from '../../utils/DataHookUtil';
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import { QueryUtil } from '../../utils/QueryUtil';
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import { useQueryMemo } from '../../hooks/useQueryMemo';
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import { useConceptSetMapQuery } from '../useConceptSetsQuery';
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export const useConceptQuery = (): UseQueryResult<Concept[]> => {
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return useQueryMemo({
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queryKey: QueryUtil.getGenericKey(QUERY_KEY.CONCEPTS),
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queryFn: async ({ signal }) => {
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const response = await OntologyApi.instance.conceptsGetAll({ signal });
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return response.data;
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},
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});
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};
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export const useConceptMapQuery = (): UseMap<Concept> => {
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const response = useConceptQuery();
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return useMemo(() => {
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return DataHookUtil.createUseMapDataHook<Concept>(response, item => item.id);
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}, [response]);
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};
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export const useConceptNameFactory = (): UseNameFactory<Concept> => {
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const conceptSetMapQuery = useConceptSetMapQuery();
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return useMemo(() => {
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const getName = (item: Concept) => {
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return `${conceptSetMapQuery.map.get(item.concept_set_id)?.name ?? item.concept_set_id} → ${item.name}`;
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};
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return DataHookUtil.createUseNameFactoryHook(getName, [conceptSetMapQuery]);
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}, [conceptSetMapQuery]);
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};
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export const useConceptOptionsQuery = (): UseOptions<string> => {
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const conceptQuery = useConceptQuery();
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const conceptNameFactory = useConceptNameFactory();
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return useMemo(() => {
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return DataHookUtil.createUseOptionsDataHook<Concept>(conceptQuery, item => item.id, conceptNameFactory.getName, [conceptNameFactory]);
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}, [conceptNameFactory, conceptQuery]);
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};
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export * from './useConceptRelationTypeQuery';
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import { useMemo } from 'react';
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import { ConceptRelationType } from '../../api';
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import type { UseOptions } from '../../models/dataHooks';
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import type { OptionBase } from '../../models/form';
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export const conceptRelationTypePresentationValues: Partial<Record<ConceptRelationType, string>> = {
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[ConceptRelationType.CONTAINS]: 'CONTAINS',
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};
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export const useConceptRelationTypeOptionsQuery = (): UseOptions<string> => {
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return useMemo(() => {
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const options: OptionBase<string>[] = Object.entries(conceptRelationTypePresentationValues).map(([value, label]) => ({ value, label }));
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return {
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isLoading: false,
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options,
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error: null,
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} as UseOptions<string>;
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}, []);
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};
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export * from './useConceptSetTypeQuery';
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import { useMemo } from 'react';
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import type { UseOptions } from '../../models/dataHooks';
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import type { OptionBase } from '../../models/form';
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import { ConceptSetType } from '../../api';
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export const conceptSetTypePresentationValues: Partial<Record<ConceptSetType, string>> = {
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[ConceptSetType.CONTEXT_FREE_GRAMMAR_JSON]: 'CONTEXT_FREE_GRAMMAR_JSON',
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[ConceptSetType.CONTEXT_FREE_GRAMMAR_XML]: 'CONTEXT_FREE_GRAMMAR_XML',
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[ConceptSetType.REGULAR_LANGUAGE]: 'REGULAR_LANGUAGE',
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[ConceptSetType.NOMINAL]: 'NOMINAL',
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[ConceptSetType.ORDINAL]: 'ORDINAL',
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[ConceptSetType.INTERVAL]: 'INTERVAL',
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};
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export const useConceptSetTypeOptionsQuery = (): UseOptions<string> => {
|
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return useMemo(() => {
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const options: OptionBase<string>[] = Object.entries(conceptSetTypePresentationValues).map(([value, label]) => ({ value, label }));
|
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return {
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isLoading: false,
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options,
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error: null,
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} as UseOptions<string>;
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}, []);
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};
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export * from './useConceptSetsQuery';
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import type { UseQueryResult } from '@tanstack/react-query';
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import { useMemo } from 'react';
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import type { ConceptSet } from '../../api';
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import { OntologyApi } from '../../api';
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import type {
|
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UseMap,
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UseOptions,
|
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} from '../../models/dataHooks';
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import { QUERY_KEY } from '../../models/query';
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import { DataHookUtil } from '../../utils/DataHookUtil';
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import { QueryUtil } from '../../utils/QueryUtil';
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import { useQueryMemo } from '../../hooks/useQueryMemo';
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+
|
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|
+
export const useConceptSetsQuery = (): UseQueryResult<ConceptSet[]> => {
|
|
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|
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return useQueryMemo({
|
|
17
|
+
queryKey: QueryUtil.getGenericKey(QUERY_KEY.CONCEPT_SETS),
|
|
18
|
+
queryFn: async ({ signal }) => {
|
|
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const response = await OntologyApi.instance.conceptSetsGetAll({ signal });
|
|
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|
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return response.data;
|
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+
},
|
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|
+
});
|
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|
+
};
|
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+
|
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+
export const useConceptSetMapQuery = (): UseMap<ConceptSet> => {
|
|
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|
+
const response = useConceptSetsQuery();
|
|
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|
+
return useMemo(() => {
|
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|
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return DataHookUtil.createUseMapDataHook<ConceptSet>(response, item => item.id);
|
|
29
|
+
}, [response]);
|
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|
+
};
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+
|
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32
|
+
export const useConceptSetOptionsQuery = (): UseOptions<string> => {
|
|
33
|
+
const conceptSetsQuery = useConceptSetsQuery();
|
|
34
|
+
|
|
35
|
+
return useMemo(() => {
|
|
36
|
+
return DataHookUtil.createUseOptionsDataHook<ConceptSet>(conceptSetsQuery, item => item.id, item => item.name);
|
|
37
|
+
}, [conceptSetsQuery]);
|
|
38
|
+
};
|
|
@@ -0,0 +1 @@
|
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|
+
export * from './useDataCollectionSetMembersQuery';
|
|
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|
|
|
1
|
+
import type { UseQueryResult } from '@tanstack/react-query';
|
|
2
|
+
|
|
3
|
+
import type { DataCollectionSetMember } from '../../api';
|
|
4
|
+
import { OrganizationApi } from '../../api';
|
|
5
|
+
import { QUERY_KEY } from '../../models/query';
|
|
6
|
+
import { QueryUtil } from '../../utils/QueryUtil';
|
|
7
|
+
import { useQueryMemo } from '../../hooks/useQueryMemo';
|
|
8
|
+
|
|
9
|
+
export const useDataCollectionSetMembersQuery = (): UseQueryResult<DataCollectionSetMember[]> => {
|
|
10
|
+
return useQueryMemo({
|
|
11
|
+
queryKey: QueryUtil.getGenericKey(QUERY_KEY.DATA_COLLECTION_SET_MEMBERS),
|
|
12
|
+
queryFn: async ({ signal }) => {
|
|
13
|
+
const response = await OrganizationApi.instance.dataCollectionSetMembersGetAll({ signal });
|
|
14
|
+
return response.data;
|
|
15
|
+
},
|
|
16
|
+
});
|
|
17
|
+
};
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
export * from './useDataCollectionsQuery';
|
|
@@ -0,0 +1,45 @@
|
|
|
1
|
+
import type { UseQueryResult } from '@tanstack/react-query';
|
|
2
|
+
import { useMemo } from 'react';
|
|
3
|
+
|
|
4
|
+
import type { DataCollection } from '../../api';
|
|
5
|
+
import { OrganizationApi } from '../../api';
|
|
6
|
+
import type {
|
|
7
|
+
UseMap,
|
|
8
|
+
UseOptions,
|
|
9
|
+
} from '../../models/dataHooks';
|
|
10
|
+
import { QUERY_KEY } from '../../models/query';
|
|
11
|
+
import { DataHookUtil } from '../../utils/DataHookUtil';
|
|
12
|
+
import { QueryUtil } from '../../utils/QueryUtil';
|
|
13
|
+
import { useQueryMemo } from '../../hooks/useQueryMemo';
|
|
14
|
+
|
|
15
|
+
export const useDataCollectionsQuery = (dataCollectionIds?: string[]): UseQueryResult<DataCollection[]> => {
|
|
16
|
+
return useQueryMemo({
|
|
17
|
+
queryKey: QueryUtil.getGenericKey(QUERY_KEY.DATA_COLLECTIONS),
|
|
18
|
+
queryFn: async ({ signal }) => {
|
|
19
|
+
const response = await OrganizationApi.instance.dataCollectionsGetAll({ signal });
|
|
20
|
+
return response.data;
|
|
21
|
+
},
|
|
22
|
+
select: (items) => {
|
|
23
|
+
if (dataCollectionIds) {
|
|
24
|
+
return items.filter(item => dataCollectionIds.includes(item.id));
|
|
25
|
+
}
|
|
26
|
+
return items;
|
|
27
|
+
},
|
|
28
|
+
});
|
|
29
|
+
};
|
|
30
|
+
|
|
31
|
+
export const useDataCollectionsMapQuery = (dataCollectionIds?: string[]): UseMap<DataCollection> => {
|
|
32
|
+
const dataCollectionsQuery = useDataCollectionsQuery(dataCollectionIds);
|
|
33
|
+
|
|
34
|
+
return useMemo(() => {
|
|
35
|
+
return DataHookUtil.createUseMapDataHook<DataCollection>(dataCollectionsQuery, item => item.id);
|
|
36
|
+
}, [dataCollectionsQuery]);
|
|
37
|
+
};
|
|
38
|
+
|
|
39
|
+
export const useDataCollectionOptionsQuery = (dataCollectionIds?: string[]): UseOptions<string> => {
|
|
40
|
+
const dataCollectionsQuery = useDataCollectionsQuery(dataCollectionIds);
|
|
41
|
+
|
|
42
|
+
return useMemo(() => {
|
|
43
|
+
return DataHookUtil.createUseOptionsDataHook<DataCollection>(dataCollectionsQuery, item => item.id, item => item.name);
|
|
44
|
+
}, [dataCollectionsQuery]);
|
|
45
|
+
};
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
export * from './useDimTypesQuery';
|
|
@@ -0,0 +1,26 @@
|
|
|
1
|
+
import { useMemo } from 'react';
|
|
2
|
+
|
|
3
|
+
import { DimType } from '../../api';
|
|
4
|
+
import type { UseOptions } from '../../models/dataHooks';
|
|
5
|
+
import type { OptionBase } from '../../models/form';
|
|
6
|
+
|
|
7
|
+
export const dimTypePresentationValues: Record<DimType, string> = {
|
|
8
|
+
[DimType.GEO]: 'GEO',
|
|
9
|
+
[DimType.IDENTIFIER]: 'IDENTIFIER',
|
|
10
|
+
[DimType.NUMBER]: 'NUMBER',
|
|
11
|
+
[DimType.ORGANIZATION]: 'ORGANIZATION',
|
|
12
|
+
[DimType.OTHER]: 'OTHER',
|
|
13
|
+
[DimType.TEXT]: 'TEXT',
|
|
14
|
+
[DimType.TIME]: 'TIME',
|
|
15
|
+
};
|
|
16
|
+
|
|
17
|
+
export const useDimTypeOptionsQuery = (): UseOptions<string> => {
|
|
18
|
+
return useMemo(() => {
|
|
19
|
+
const options: OptionBase<string>[] = Object.entries(dimTypePresentationValues).map(([value, label]) => ({ value, label }));
|
|
20
|
+
return {
|
|
21
|
+
isLoading: false,
|
|
22
|
+
options,
|
|
23
|
+
error: null as UseOptions<string>,
|
|
24
|
+
};
|
|
25
|
+
}, []);
|
|
26
|
+
};
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
export * from './useDimsQuery';
|
|
@@ -0,0 +1,55 @@
|
|
|
1
|
+
import type { UseQueryResult } from '@tanstack/react-query';
|
|
2
|
+
import { useMemo } from 'react';
|
|
3
|
+
|
|
4
|
+
import type { Dim } from '../../api';
|
|
5
|
+
import { CaseApi } from '../../api';
|
|
6
|
+
import type {
|
|
7
|
+
UseMap,
|
|
8
|
+
UseNameFactory,
|
|
9
|
+
UseOptions,
|
|
10
|
+
} from '../../models/dataHooks';
|
|
11
|
+
import { QUERY_KEY } from '../../models/query';
|
|
12
|
+
import { DataHookUtil } from '../../utils/DataHookUtil';
|
|
13
|
+
import { QueryUtil } from '../../utils/QueryUtil';
|
|
14
|
+
import { useQueryMemo } from '../../hooks/useQueryMemo';
|
|
15
|
+
import { useCaseTypeMapQuery } from '../useCaseTypesQuery';
|
|
16
|
+
|
|
17
|
+
export const useDimsQuery = (): UseQueryResult<Dim[]> => {
|
|
18
|
+
return useQueryMemo({
|
|
19
|
+
queryKey: QueryUtil.getGenericKey(QUERY_KEY.DIMS),
|
|
20
|
+
queryFn: async ({ signal }) => {
|
|
21
|
+
const response = await CaseApi.instance.dimsGetAll({ signal });
|
|
22
|
+
return response.data;
|
|
23
|
+
},
|
|
24
|
+
});
|
|
25
|
+
};
|
|
26
|
+
|
|
27
|
+
export const useDimMapQuery = (): UseMap<Dim> => {
|
|
28
|
+
const response = useDimsQuery();
|
|
29
|
+
|
|
30
|
+
return useMemo(() => {
|
|
31
|
+
return DataHookUtil.createUseMapDataHook<Dim>(response, item => item.id);
|
|
32
|
+
}, [response]);
|
|
33
|
+
};
|
|
34
|
+
|
|
35
|
+
export const useDimNameFactory = (): UseNameFactory<Dim> => {
|
|
36
|
+
const caseTypeMapQuery = useCaseTypeMapQuery();
|
|
37
|
+
|
|
38
|
+
return useMemo(() => {
|
|
39
|
+
const getName = (item: Dim) => {
|
|
40
|
+
const caseTypeName = caseTypeMapQuery.map.get(item.case_type_id)?.name ?? item.case_type_id;
|
|
41
|
+
return `${caseTypeName} → ${item.label}`;
|
|
42
|
+
};
|
|
43
|
+
return DataHookUtil.createUseNameFactoryHook(getName, [caseTypeMapQuery]);
|
|
44
|
+
}, [caseTypeMapQuery]);
|
|
45
|
+
};
|
|
46
|
+
|
|
47
|
+
export const useDimOptionsQuery = (): UseOptions<string> => {
|
|
48
|
+
const response = useDimsQuery();
|
|
49
|
+
|
|
50
|
+
const dimNameFactory = useDimNameFactory();
|
|
51
|
+
|
|
52
|
+
return useMemo(() => {
|
|
53
|
+
return DataHookUtil.createUseOptionsDataHook<Dim>(response, item => item.id, dimNameFactory.getName, [dimNameFactory]);
|
|
54
|
+
}, [dimNameFactory, response]);
|
|
55
|
+
};
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
export * from './useDiseasesQuery';
|
|
@@ -0,0 +1,39 @@
|
|
|
1
|
+
import type { UseQueryResult } from '@tanstack/react-query';
|
|
2
|
+
import { useMemo } from 'react';
|
|
3
|
+
|
|
4
|
+
import type { Disease } from '../../api';
|
|
5
|
+
import { OntologyApi } from '../../api';
|
|
6
|
+
import type {
|
|
7
|
+
UseMap,
|
|
8
|
+
UseOptions,
|
|
9
|
+
} from '../../models/dataHooks';
|
|
10
|
+
import { QUERY_KEY } from '../../models/query';
|
|
11
|
+
import { DataHookUtil } from '../../utils/DataHookUtil';
|
|
12
|
+
import { QueryUtil } from '../../utils/QueryUtil';
|
|
13
|
+
import { useQueryMemo } from '../../hooks/useQueryMemo';
|
|
14
|
+
|
|
15
|
+
export const useDiseasesQuery = (): UseQueryResult<Disease[]> => {
|
|
16
|
+
return useQueryMemo({
|
|
17
|
+
queryKey: QueryUtil.getGenericKey(QUERY_KEY.DISEASES),
|
|
18
|
+
queryFn: async ({ signal }) => {
|
|
19
|
+
const response = await OntologyApi.instance.diseasesGetAll({ signal });
|
|
20
|
+
return response.data;
|
|
21
|
+
},
|
|
22
|
+
});
|
|
23
|
+
};
|
|
24
|
+
|
|
25
|
+
export const useDiseasesMapQuery = (): UseMap<Disease> => {
|
|
26
|
+
const diseasesQuery = useDiseasesQuery();
|
|
27
|
+
|
|
28
|
+
return useMemo(() => {
|
|
29
|
+
return DataHookUtil.createUseMapDataHook<Disease>(diseasesQuery, item => item.id);
|
|
30
|
+
}, [diseasesQuery]);
|
|
31
|
+
};
|
|
32
|
+
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33
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+
export const useDiseaseOptionsQuery = (): UseOptions<string> => {
|
|
34
|
+
const diseasesQuery = useDiseasesQuery();
|
|
35
|
+
|
|
36
|
+
return useMemo(() => {
|
|
37
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+
return DataHookUtil.createUseOptionsDataHook<Disease>(diseasesQuery, item => item.id, item => item.name);
|
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38
|
+
}, [diseasesQuery]);
|
|
39
|
+
};
|
|
@@ -0,0 +1 @@
|
|
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1
|
+
export * from './useEtiologicalAgentsQuery';
|
|
@@ -0,0 +1,39 @@
|
|
|
1
|
+
import { type UseQueryResult } from '@tanstack/react-query';
|
|
2
|
+
import { useMemo } from 'react';
|
|
3
|
+
|
|
4
|
+
import type { EtiologicalAgent } from '../../api';
|
|
5
|
+
import { OntologyApi } from '../../api';
|
|
6
|
+
import type {
|
|
7
|
+
UseMap,
|
|
8
|
+
UseOptions,
|
|
9
|
+
} from '../../models/dataHooks';
|
|
10
|
+
import { QUERY_KEY } from '../../models/query';
|
|
11
|
+
import { DataHookUtil } from '../../utils/DataHookUtil';
|
|
12
|
+
import { QueryUtil } from '../../utils/QueryUtil';
|
|
13
|
+
import { useQueryMemo } from '../../hooks/useQueryMemo';
|
|
14
|
+
|
|
15
|
+
export const useEtiologicalAgentsQuery = (): UseQueryResult<EtiologicalAgent[]> => {
|
|
16
|
+
return useQueryMemo({
|
|
17
|
+
queryKey: QueryUtil.getGenericKey(QUERY_KEY.ETIOLOGICAL_AGENTS),
|
|
18
|
+
queryFn: async ({ signal }) => {
|
|
19
|
+
const response = await OntologyApi.instance.etiologicalAgentsGetAll({ signal });
|
|
20
|
+
return response.data;
|
|
21
|
+
},
|
|
22
|
+
});
|
|
23
|
+
};
|
|
24
|
+
|
|
25
|
+
export const useEtiologicalAgentsMapQuery = (): UseMap<EtiologicalAgent> => {
|
|
26
|
+
const etiologicalAgentsQuery = useEtiologicalAgentsQuery();
|
|
27
|
+
|
|
28
|
+
return useMemo(() => {
|
|
29
|
+
return DataHookUtil.createUseMapDataHook<EtiologicalAgent>(etiologicalAgentsQuery, item => item.id);
|
|
30
|
+
}, [etiologicalAgentsQuery]);
|
|
31
|
+
};
|
|
32
|
+
|
|
33
|
+
export const useEtiologicalAgentOptionsQuery = (): UseOptions<string> => {
|
|
34
|
+
const etiologicalAgentsQuery = useEtiologicalAgentsQuery();
|
|
35
|
+
|
|
36
|
+
return useMemo(() => {
|
|
37
|
+
return DataHookUtil.createUseOptionsDataHook<EtiologicalAgent>(etiologicalAgentsQuery, item => item.id, item => item.name);
|
|
38
|
+
}, [etiologicalAgentsQuery]);
|
|
39
|
+
};
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
export * from './useGeneticDistanceProtocolsQuery';
|
|
@@ -0,0 +1,29 @@
|
|
|
1
|
+
import type { UseQueryResult } from '@tanstack/react-query';
|
|
2
|
+
import { useMemo } from 'react';
|
|
3
|
+
|
|
4
|
+
import type { GeneticDistanceProtocol } from '../../api';
|
|
5
|
+
import { CaseApi } from '../../api';
|
|
6
|
+
import type { UseOptions } from '../../models/dataHooks';
|
|
7
|
+
import { QUERY_KEY } from '../../models/query';
|
|
8
|
+
import { DataHookUtil } from '../../utils/DataHookUtil';
|
|
9
|
+
import { QueryUtil } from '../../utils/QueryUtil';
|
|
10
|
+
import { useQueryMemo } from '../../hooks/useQueryMemo';
|
|
11
|
+
|
|
12
|
+
export const useGeneticDistanceProtocolsQuery = (): UseQueryResult<GeneticDistanceProtocol[]> => {
|
|
13
|
+
return useQueryMemo({
|
|
14
|
+
queryKey: QueryUtil.getGenericKey(QUERY_KEY.GENETIC_DISTANCE_PROTOCOLS),
|
|
15
|
+
queryFn: async ({ signal }) => {
|
|
16
|
+
const response = await CaseApi.instance.geneticDistanceProtocolsGetAll({ signal });
|
|
17
|
+
return response.data;
|
|
18
|
+
},
|
|
19
|
+
});
|
|
20
|
+
};
|
|
21
|
+
|
|
22
|
+
export const useGeneticDistanceProtocolOptionsQuery = (): UseOptions<string> => {
|
|
23
|
+
const geneticDistanceProtocolsQuery = useGeneticDistanceProtocolsQuery();
|
|
24
|
+
|
|
25
|
+
return useMemo(() => {
|
|
26
|
+
return DataHookUtil.createUseOptionsDataHook<GeneticDistanceProtocol>(geneticDistanceProtocolsQuery, item => item.id, item => item.name);
|
|
27
|
+
|
|
28
|
+
}, [geneticDistanceProtocolsQuery]);
|
|
29
|
+
};
|