tomoto 0.2.3 → 0.3.0

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Files changed (347) hide show
  1. checksums.yaml +4 -4
  2. data/CHANGELOG.md +6 -0
  3. data/README.md +8 -10
  4. data/ext/tomoto/extconf.rb +6 -2
  5. data/ext/tomoto/{ext.cpp → tomoto.cpp} +1 -1
  6. data/lib/tomoto/version.rb +1 -1
  7. data/lib/tomoto.rb +5 -1
  8. data/vendor/EigenRand/EigenRand/Core.h +10 -10
  9. data/vendor/EigenRand/EigenRand/Dists/Basic.h +208 -9
  10. data/vendor/EigenRand/EigenRand/Dists/Discrete.h +52 -31
  11. data/vendor/EigenRand/EigenRand/Dists/GammaPoisson.h +9 -8
  12. data/vendor/EigenRand/EigenRand/Dists/NormalExp.h +28 -21
  13. data/vendor/EigenRand/EigenRand/EigenRand +11 -6
  14. data/vendor/EigenRand/EigenRand/Macro.h +13 -7
  15. data/vendor/EigenRand/EigenRand/MorePacketMath.h +348 -740
  16. data/vendor/EigenRand/EigenRand/MvDists/Multinomial.h +5 -3
  17. data/vendor/EigenRand/EigenRand/MvDists/MvNormal.h +9 -3
  18. data/vendor/EigenRand/EigenRand/PacketFilter.h +11 -253
  19. data/vendor/EigenRand/EigenRand/PacketRandomEngine.h +21 -47
  20. data/vendor/EigenRand/EigenRand/RandUtils.h +50 -344
  21. data/vendor/EigenRand/EigenRand/arch/AVX/MorePacketMath.h +619 -0
  22. data/vendor/EigenRand/EigenRand/arch/AVX/PacketFilter.h +149 -0
  23. data/vendor/EigenRand/EigenRand/arch/AVX/RandUtils.h +228 -0
  24. data/vendor/EigenRand/EigenRand/arch/NEON/MorePacketMath.h +473 -0
  25. data/vendor/EigenRand/EigenRand/arch/NEON/PacketFilter.h +142 -0
  26. data/vendor/EigenRand/EigenRand/arch/NEON/RandUtils.h +126 -0
  27. data/vendor/EigenRand/EigenRand/arch/SSE/MorePacketMath.h +501 -0
  28. data/vendor/EigenRand/EigenRand/arch/SSE/PacketFilter.h +133 -0
  29. data/vendor/EigenRand/EigenRand/arch/SSE/RandUtils.h +120 -0
  30. data/vendor/EigenRand/EigenRand/doc.h +24 -12
  31. data/vendor/EigenRand/README.md +57 -4
  32. data/vendor/eigen/COPYING.APACHE +203 -0
  33. data/vendor/eigen/COPYING.BSD +1 -1
  34. data/vendor/eigen/COPYING.MINPACK +51 -52
  35. data/vendor/eigen/Eigen/Cholesky +0 -1
  36. data/vendor/eigen/Eigen/Core +112 -265
  37. data/vendor/eigen/Eigen/Eigenvalues +2 -3
  38. data/vendor/eigen/Eigen/Geometry +5 -8
  39. data/vendor/eigen/Eigen/Householder +0 -1
  40. data/vendor/eigen/Eigen/Jacobi +0 -1
  41. data/vendor/eigen/Eigen/KLUSupport +41 -0
  42. data/vendor/eigen/Eigen/LU +2 -5
  43. data/vendor/eigen/Eigen/OrderingMethods +0 -3
  44. data/vendor/eigen/Eigen/PaStiXSupport +1 -0
  45. data/vendor/eigen/Eigen/PardisoSupport +0 -0
  46. data/vendor/eigen/Eigen/QR +2 -3
  47. data/vendor/eigen/Eigen/QtAlignedMalloc +0 -1
  48. data/vendor/eigen/Eigen/SVD +0 -1
  49. data/vendor/eigen/Eigen/Sparse +0 -2
  50. data/vendor/eigen/Eigen/SparseCholesky +0 -8
  51. data/vendor/eigen/Eigen/SparseLU +4 -0
  52. data/vendor/eigen/Eigen/SparseQR +0 -1
  53. data/vendor/eigen/Eigen/src/Cholesky/LDLT.h +42 -27
  54. data/vendor/eigen/Eigen/src/Cholesky/LLT.h +39 -23
  55. data/vendor/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +90 -47
  56. data/vendor/eigen/Eigen/src/Core/ArithmeticSequence.h +413 -0
  57. data/vendor/eigen/Eigen/src/Core/Array.h +99 -11
  58. data/vendor/eigen/Eigen/src/Core/ArrayBase.h +3 -3
  59. data/vendor/eigen/Eigen/src/Core/ArrayWrapper.h +21 -21
  60. data/vendor/eigen/Eigen/src/Core/Assign.h +1 -1
  61. data/vendor/eigen/Eigen/src/Core/AssignEvaluator.h +125 -50
  62. data/vendor/eigen/Eigen/src/Core/Assign_MKL.h +10 -10
  63. data/vendor/eigen/Eigen/src/Core/BandMatrix.h +16 -16
  64. data/vendor/eigen/Eigen/src/Core/Block.h +56 -60
  65. data/vendor/eigen/Eigen/src/Core/BooleanRedux.h +29 -31
  66. data/vendor/eigen/Eigen/src/Core/CommaInitializer.h +7 -3
  67. data/vendor/eigen/Eigen/src/Core/CoreEvaluators.h +325 -272
  68. data/vendor/eigen/Eigen/src/Core/CoreIterators.h +5 -0
  69. data/vendor/eigen/Eigen/src/Core/CwiseBinaryOp.h +21 -22
  70. data/vendor/eigen/Eigen/src/Core/CwiseNullaryOp.h +153 -18
  71. data/vendor/eigen/Eigen/src/Core/CwiseUnaryOp.h +6 -6
  72. data/vendor/eigen/Eigen/src/Core/CwiseUnaryView.h +14 -10
  73. data/vendor/eigen/Eigen/src/Core/DenseBase.h +132 -42
  74. data/vendor/eigen/Eigen/src/Core/DenseCoeffsBase.h +25 -21
  75. data/vendor/eigen/Eigen/src/Core/DenseStorage.h +153 -71
  76. data/vendor/eigen/Eigen/src/Core/Diagonal.h +21 -23
  77. data/vendor/eigen/Eigen/src/Core/DiagonalMatrix.h +50 -2
  78. data/vendor/eigen/Eigen/src/Core/DiagonalProduct.h +1 -1
  79. data/vendor/eigen/Eigen/src/Core/Dot.h +10 -10
  80. data/vendor/eigen/Eigen/src/Core/EigenBase.h +10 -9
  81. data/vendor/eigen/Eigen/src/Core/ForceAlignedAccess.h +8 -4
  82. data/vendor/eigen/Eigen/src/Core/Fuzzy.h +3 -3
  83. data/vendor/eigen/Eigen/src/Core/GeneralProduct.h +20 -10
  84. data/vendor/eigen/Eigen/src/Core/GenericPacketMath.h +599 -152
  85. data/vendor/eigen/Eigen/src/Core/GlobalFunctions.h +40 -33
  86. data/vendor/eigen/Eigen/src/Core/IO.h +40 -7
  87. data/vendor/eigen/Eigen/src/Core/IndexedView.h +237 -0
  88. data/vendor/eigen/Eigen/src/Core/Inverse.h +9 -10
  89. data/vendor/eigen/Eigen/src/Core/Map.h +7 -7
  90. data/vendor/eigen/Eigen/src/Core/MapBase.h +10 -3
  91. data/vendor/eigen/Eigen/src/Core/MathFunctions.h +767 -125
  92. data/vendor/eigen/Eigen/src/Core/MathFunctionsImpl.h +118 -19
  93. data/vendor/eigen/Eigen/src/Core/Matrix.h +131 -25
  94. data/vendor/eigen/Eigen/src/Core/MatrixBase.h +21 -3
  95. data/vendor/eigen/Eigen/src/Core/NestByValue.h +25 -50
  96. data/vendor/eigen/Eigen/src/Core/NoAlias.h +4 -3
  97. data/vendor/eigen/Eigen/src/Core/NumTraits.h +107 -20
  98. data/vendor/eigen/Eigen/src/Core/PartialReduxEvaluator.h +232 -0
  99. data/vendor/eigen/Eigen/src/Core/PermutationMatrix.h +3 -31
  100. data/vendor/eigen/Eigen/src/Core/PlainObjectBase.h +152 -59
  101. data/vendor/eigen/Eigen/src/Core/Product.h +30 -25
  102. data/vendor/eigen/Eigen/src/Core/ProductEvaluators.h +192 -125
  103. data/vendor/eigen/Eigen/src/Core/Random.h +37 -1
  104. data/vendor/eigen/Eigen/src/Core/Redux.h +180 -170
  105. data/vendor/eigen/Eigen/src/Core/Ref.h +121 -23
  106. data/vendor/eigen/Eigen/src/Core/Replicate.h +8 -8
  107. data/vendor/eigen/Eigen/src/Core/Reshaped.h +454 -0
  108. data/vendor/eigen/Eigen/src/Core/ReturnByValue.h +7 -5
  109. data/vendor/eigen/Eigen/src/Core/Reverse.h +18 -12
  110. data/vendor/eigen/Eigen/src/Core/Select.h +8 -6
  111. data/vendor/eigen/Eigen/src/Core/SelfAdjointView.h +33 -20
  112. data/vendor/eigen/Eigen/src/Core/Solve.h +14 -14
  113. data/vendor/eigen/Eigen/src/Core/SolveTriangular.h +16 -16
  114. data/vendor/eigen/Eigen/src/Core/SolverBase.h +41 -3
  115. data/vendor/eigen/Eigen/src/Core/StableNorm.h +100 -70
  116. data/vendor/eigen/Eigen/src/Core/StlIterators.h +463 -0
  117. data/vendor/eigen/Eigen/src/Core/Stride.h +9 -4
  118. data/vendor/eigen/Eigen/src/Core/Swap.h +5 -4
  119. data/vendor/eigen/Eigen/src/Core/Transpose.h +88 -27
  120. data/vendor/eigen/Eigen/src/Core/Transpositions.h +26 -47
  121. data/vendor/eigen/Eigen/src/Core/TriangularMatrix.h +93 -75
  122. data/vendor/eigen/Eigen/src/Core/VectorBlock.h +5 -5
  123. data/vendor/eigen/Eigen/src/Core/VectorwiseOp.h +159 -70
  124. data/vendor/eigen/Eigen/src/Core/Visitor.h +137 -29
  125. data/vendor/eigen/Eigen/src/Core/arch/AVX/Complex.h +50 -129
  126. data/vendor/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +126 -337
  127. data/vendor/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +1092 -155
  128. data/vendor/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +65 -1
  129. data/vendor/eigen/Eigen/src/Core/arch/AVX512/Complex.h +422 -0
  130. data/vendor/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +207 -236
  131. data/vendor/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1482 -495
  132. data/vendor/eigen/Eigen/src/Core/arch/AVX512/TypeCasting.h +89 -0
  133. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +152 -165
  134. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +19 -251
  135. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2937 -0
  136. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +221 -0
  137. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +629 -0
  138. data/vendor/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +2042 -392
  139. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Complex.h +235 -80
  140. data/vendor/eigen/Eigen/src/Core/arch/Default/BFloat16.h +700 -0
  141. data/vendor/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +102 -14
  142. data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1649 -0
  143. data/vendor/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +110 -0
  144. data/vendor/eigen/Eigen/src/Core/arch/Default/Half.h +942 -0
  145. data/vendor/eigen/Eigen/src/Core/arch/Default/Settings.h +1 -1
  146. data/vendor/eigen/Eigen/src/Core/arch/Default/TypeCasting.h +120 -0
  147. data/vendor/eigen/Eigen/src/Core/arch/{CUDA → GPU}/MathFunctions.h +16 -4
  148. data/vendor/eigen/Eigen/src/Core/arch/GPU/PacketMath.h +1685 -0
  149. data/vendor/eigen/Eigen/src/Core/arch/GPU/TypeCasting.h +80 -0
  150. data/vendor/eigen/Eigen/src/Core/arch/HIP/hcc/math_constants.h +23 -0
  151. data/vendor/eigen/Eigen/src/Core/arch/MSA/Complex.h +648 -0
  152. data/vendor/eigen/Eigen/src/Core/arch/MSA/MathFunctions.h +387 -0
  153. data/vendor/eigen/Eigen/src/Core/arch/MSA/PacketMath.h +1233 -0
  154. data/vendor/eigen/Eigen/src/Core/arch/NEON/Complex.h +313 -219
  155. data/vendor/eigen/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +183 -0
  156. data/vendor/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +54 -70
  157. data/vendor/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +4376 -549
  158. data/vendor/eigen/Eigen/src/Core/arch/NEON/TypeCasting.h +1419 -0
  159. data/vendor/eigen/Eigen/src/Core/arch/SSE/Complex.h +59 -179
  160. data/vendor/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +65 -428
  161. data/vendor/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +893 -283
  162. data/vendor/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +65 -0
  163. data/vendor/eigen/Eigen/src/Core/arch/SVE/MathFunctions.h +44 -0
  164. data/vendor/eigen/Eigen/src/Core/arch/SVE/PacketMath.h +752 -0
  165. data/vendor/eigen/Eigen/src/Core/arch/SVE/TypeCasting.h +49 -0
  166. data/vendor/eigen/Eigen/src/Core/arch/SYCL/InteropHeaders.h +232 -0
  167. data/vendor/eigen/Eigen/src/Core/arch/SYCL/MathFunctions.h +301 -0
  168. data/vendor/eigen/Eigen/src/Core/arch/SYCL/PacketMath.h +670 -0
  169. data/vendor/eigen/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +694 -0
  170. data/vendor/eigen/Eigen/src/Core/arch/SYCL/TypeCasting.h +85 -0
  171. data/vendor/eigen/Eigen/src/Core/arch/ZVector/Complex.h +212 -183
  172. data/vendor/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +101 -5
  173. data/vendor/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +510 -395
  174. data/vendor/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +11 -2
  175. data/vendor/eigen/Eigen/src/Core/functors/BinaryFunctors.h +112 -46
  176. data/vendor/eigen/Eigen/src/Core/functors/NullaryFunctors.h +31 -30
  177. data/vendor/eigen/Eigen/src/Core/functors/StlFunctors.h +32 -2
  178. data/vendor/eigen/Eigen/src/Core/functors/UnaryFunctors.h +355 -16
  179. data/vendor/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +1075 -586
  180. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +49 -24
  181. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +41 -35
  182. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +6 -6
  183. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +4 -2
  184. data/vendor/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +382 -483
  185. data/vendor/eigen/Eigen/src/Core/products/Parallelizer.h +22 -5
  186. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +53 -30
  187. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +16 -8
  188. data/vendor/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +8 -6
  189. data/vendor/eigen/Eigen/src/Core/products/SelfadjointProduct.h +4 -4
  190. data/vendor/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +5 -4
  191. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +33 -27
  192. data/vendor/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +14 -12
  193. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +36 -34
  194. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +8 -4
  195. data/vendor/eigen/Eigen/src/Core/products/TriangularSolverVector.h +13 -10
  196. data/vendor/eigen/Eigen/src/Core/util/BlasUtil.h +304 -119
  197. data/vendor/eigen/Eigen/src/Core/util/ConfigureVectorization.h +512 -0
  198. data/vendor/eigen/Eigen/src/Core/util/Constants.h +25 -9
  199. data/vendor/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +26 -3
  200. data/vendor/eigen/Eigen/src/Core/util/ForwardDeclarations.h +29 -9
  201. data/vendor/eigen/Eigen/src/Core/util/IndexedViewHelper.h +186 -0
  202. data/vendor/eigen/Eigen/src/Core/util/IntegralConstant.h +272 -0
  203. data/vendor/eigen/Eigen/src/Core/util/MKL_support.h +8 -1
  204. data/vendor/eigen/Eigen/src/Core/util/Macros.h +709 -246
  205. data/vendor/eigen/Eigen/src/Core/util/Memory.h +222 -52
  206. data/vendor/eigen/Eigen/src/Core/util/Meta.h +355 -77
  207. data/vendor/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +5 -1
  208. data/vendor/eigen/Eigen/src/Core/util/ReshapedHelper.h +51 -0
  209. data/vendor/eigen/Eigen/src/Core/util/StaticAssert.h +8 -5
  210. data/vendor/eigen/Eigen/src/Core/util/SymbolicIndex.h +293 -0
  211. data/vendor/eigen/Eigen/src/Core/util/XprHelper.h +65 -30
  212. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +1 -1
  213. data/vendor/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +7 -4
  214. data/vendor/eigen/Eigen/src/Eigenvalues/EigenSolver.h +2 -2
  215. data/vendor/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +1 -1
  216. data/vendor/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +2 -2
  217. data/vendor/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +2 -2
  218. data/vendor/eigen/Eigen/src/Eigenvalues/RealQZ.h +9 -6
  219. data/vendor/eigen/Eigen/src/Eigenvalues/RealSchur.h +21 -9
  220. data/vendor/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +77 -43
  221. data/vendor/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +20 -15
  222. data/vendor/eigen/Eigen/src/Geometry/AlignedBox.h +99 -5
  223. data/vendor/eigen/Eigen/src/Geometry/AngleAxis.h +4 -4
  224. data/vendor/eigen/Eigen/src/Geometry/EulerAngles.h +3 -3
  225. data/vendor/eigen/Eigen/src/Geometry/Homogeneous.h +15 -11
  226. data/vendor/eigen/Eigen/src/Geometry/Hyperplane.h +1 -1
  227. data/vendor/eigen/Eigen/src/Geometry/OrthoMethods.h +3 -2
  228. data/vendor/eigen/Eigen/src/Geometry/ParametrizedLine.h +39 -2
  229. data/vendor/eigen/Eigen/src/Geometry/Quaternion.h +70 -14
  230. data/vendor/eigen/Eigen/src/Geometry/Rotation2D.h +3 -3
  231. data/vendor/eigen/Eigen/src/Geometry/Scaling.h +23 -5
  232. data/vendor/eigen/Eigen/src/Geometry/Transform.h +88 -67
  233. data/vendor/eigen/Eigen/src/Geometry/Translation.h +6 -12
  234. data/vendor/eigen/Eigen/src/Geometry/Umeyama.h +1 -1
  235. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +168 -0
  236. data/vendor/eigen/Eigen/src/Householder/BlockHouseholder.h +9 -2
  237. data/vendor/eigen/Eigen/src/Householder/Householder.h +8 -4
  238. data/vendor/eigen/Eigen/src/Householder/HouseholderSequence.h +123 -48
  239. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +15 -15
  240. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +7 -23
  241. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +5 -22
  242. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +41 -47
  243. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +51 -60
  244. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +70 -20
  245. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +2 -20
  246. data/vendor/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +11 -9
  247. data/vendor/eigen/Eigen/src/Jacobi/Jacobi.h +31 -10
  248. data/vendor/eigen/Eigen/src/KLUSupport/KLUSupport.h +358 -0
  249. data/vendor/eigen/Eigen/src/LU/Determinant.h +35 -19
  250. data/vendor/eigen/Eigen/src/LU/FullPivLU.h +29 -43
  251. data/vendor/eigen/Eigen/src/LU/InverseImpl.h +25 -8
  252. data/vendor/eigen/Eigen/src/LU/PartialPivLU.h +71 -58
  253. data/vendor/eigen/Eigen/src/LU/arch/InverseSize4.h +351 -0
  254. data/vendor/eigen/Eigen/src/OrderingMethods/Amd.h +7 -17
  255. data/vendor/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +297 -277
  256. data/vendor/eigen/Eigen/src/OrderingMethods/Ordering.h +6 -10
  257. data/vendor/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +1 -1
  258. data/vendor/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +9 -7
  259. data/vendor/eigen/Eigen/src/QR/ColPivHouseholderQR.h +41 -20
  260. data/vendor/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +100 -27
  261. data/vendor/eigen/Eigen/src/QR/FullPivHouseholderQR.h +59 -22
  262. data/vendor/eigen/Eigen/src/QR/HouseholderQR.h +48 -23
  263. data/vendor/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +25 -3
  264. data/vendor/eigen/Eigen/src/SVD/BDCSVD.h +183 -63
  265. data/vendor/eigen/Eigen/src/SVD/JacobiSVD.h +22 -14
  266. data/vendor/eigen/Eigen/src/SVD/SVDBase.h +83 -22
  267. data/vendor/eigen/Eigen/src/SVD/UpperBidiagonalization.h +3 -3
  268. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +17 -9
  269. data/vendor/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +12 -37
  270. data/vendor/eigen/Eigen/src/SparseCore/AmbiVector.h +3 -2
  271. data/vendor/eigen/Eigen/src/SparseCore/CompressedStorage.h +16 -0
  272. data/vendor/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +6 -6
  273. data/vendor/eigen/Eigen/src/SparseCore/SparseAssign.h +81 -27
  274. data/vendor/eigen/Eigen/src/SparseCore/SparseBlock.h +25 -57
  275. data/vendor/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +40 -11
  276. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +11 -15
  277. data/vendor/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +4 -2
  278. data/vendor/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +30 -8
  279. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrix.h +126 -11
  280. data/vendor/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +5 -12
  281. data/vendor/eigen/Eigen/src/SparseCore/SparseProduct.h +13 -1
  282. data/vendor/eigen/Eigen/src/SparseCore/SparseRef.h +7 -7
  283. data/vendor/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +5 -2
  284. data/vendor/eigen/Eigen/src/SparseCore/SparseUtil.h +8 -0
  285. data/vendor/eigen/Eigen/src/SparseCore/SparseVector.h +1 -1
  286. data/vendor/eigen/Eigen/src/SparseCore/SparseView.h +1 -0
  287. data/vendor/eigen/Eigen/src/SparseLU/SparseLU.h +162 -12
  288. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +1 -1
  289. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +76 -2
  290. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +2 -2
  291. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +1 -1
  292. data/vendor/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +1 -1
  293. data/vendor/eigen/Eigen/src/SparseQR/SparseQR.h +19 -6
  294. data/vendor/eigen/Eigen/src/StlSupport/StdDeque.h +2 -12
  295. data/vendor/eigen/Eigen/src/StlSupport/StdList.h +2 -2
  296. data/vendor/eigen/Eigen/src/StlSupport/StdVector.h +2 -2
  297. data/vendor/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +6 -8
  298. data/vendor/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +175 -39
  299. data/vendor/eigen/Eigen/src/misc/lapacke.h +5 -4
  300. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +28 -2
  301. data/vendor/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +155 -11
  302. data/vendor/eigen/Eigen/src/plugins/BlockMethods.h +626 -242
  303. data/vendor/eigen/Eigen/src/plugins/CommonCwiseUnaryOps.h +14 -0
  304. data/vendor/eigen/Eigen/src/plugins/IndexedViewMethods.h +262 -0
  305. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +4 -4
  306. data/vendor/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +10 -0
  307. data/vendor/eigen/Eigen/src/plugins/ReshapedMethods.h +149 -0
  308. data/vendor/eigen/README.md +2 -0
  309. data/vendor/eigen/bench/btl/README +1 -1
  310. data/vendor/eigen/bench/tensors/README +6 -7
  311. data/vendor/eigen/ci/README.md +56 -0
  312. data/vendor/eigen/demos/mix_eigen_and_c/README +1 -1
  313. data/vendor/eigen/unsupported/Eigen/CXX11/src/Tensor/README.md +213 -158
  314. data/vendor/eigen/unsupported/README.txt +1 -1
  315. data/vendor/tomotopy/README.kr.rst +21 -0
  316. data/vendor/tomotopy/README.rst +20 -0
  317. data/vendor/tomotopy/src/Labeling/FoRelevance.cpp +2 -2
  318. data/vendor/tomotopy/src/Labeling/Phraser.hpp +1 -1
  319. data/vendor/tomotopy/src/TopicModel/CTModel.hpp +2 -1
  320. data/vendor/tomotopy/src/TopicModel/DMRModel.hpp +2 -1
  321. data/vendor/tomotopy/src/TopicModel/DTModel.hpp +1 -1
  322. data/vendor/tomotopy/src/TopicModel/GDMRModel.hpp +2 -2
  323. data/vendor/tomotopy/src/TopicModel/HDP.h +1 -0
  324. data/vendor/tomotopy/src/TopicModel/HDPModel.hpp +53 -2
  325. data/vendor/tomotopy/src/TopicModel/HLDAModel.hpp +1 -1
  326. data/vendor/tomotopy/src/TopicModel/HPAModel.hpp +1 -0
  327. data/vendor/tomotopy/src/TopicModel/LDACVB0Model.hpp +2 -2
  328. data/vendor/tomotopy/src/TopicModel/LDAModel.hpp +16 -5
  329. data/vendor/tomotopy/src/TopicModel/LLDAModel.hpp +1 -0
  330. data/vendor/tomotopy/src/TopicModel/MGLDAModel.hpp +1 -0
  331. data/vendor/tomotopy/src/TopicModel/PLDAModel.hpp +1 -0
  332. data/vendor/tomotopy/src/TopicModel/PT.h +3 -1
  333. data/vendor/tomotopy/src/TopicModel/PTModel.hpp +31 -1
  334. data/vendor/tomotopy/src/TopicModel/SLDAModel.hpp +2 -2
  335. data/vendor/tomotopy/src/TopicModel/TopicModel.hpp +7 -5
  336. data/vendor/tomotopy/src/Utils/EigenAddonOps.hpp +36 -1
  337. data/vendor/tomotopy/src/Utils/exception.h +6 -0
  338. data/vendor/tomotopy/src/Utils/sample.hpp +14 -12
  339. data/vendor/tomotopy/src/Utils/sse_gamma.h +0 -3
  340. metadata +60 -14
  341. data/vendor/eigen/Eigen/CMakeLists.txt +0 -19
  342. data/vendor/eigen/Eigen/src/Core/arch/CUDA/Half.h +0 -674
  343. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMath.h +0 -333
  344. data/vendor/eigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h +0 -1124
  345. data/vendor/eigen/Eigen/src/Core/arch/CUDA/TypeCasting.h +0 -212
  346. data/vendor/eigen/Eigen/src/Geometry/arch/Geometry_SSE.h +0 -161
  347. data/vendor/eigen/Eigen/src/LU/arch/Inverse_SSE.h +0 -338
@@ -1,333 +0,0 @@
1
- // This file is part of Eigen, a lightweight C++ template library
2
- // for linear algebra.
3
- //
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- // Copyright (C) 2014 Benoit Steiner <benoit.steiner.goog@gmail.com>
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- //
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- // This Source Code Form is subject to the terms of the Mozilla
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- // Public License v. 2.0. If a copy of the MPL was not distributed
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- // with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
-
10
- #ifndef EIGEN_PACKET_MATH_CUDA_H
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- #define EIGEN_PACKET_MATH_CUDA_H
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-
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- namespace Eigen {
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-
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- namespace internal {
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-
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- // Make sure this is only available when targeting a GPU: we don't want to
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- // introduce conflicts between these packet_traits definitions and the ones
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- // we'll use on the host side (SSE, AVX, ...)
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- #if defined(__CUDACC__) && defined(EIGEN_USE_GPU)
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- template<> struct is_arithmetic<float4> { enum { value = true }; };
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- template<> struct is_arithmetic<double2> { enum { value = true }; };
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-
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- template<> struct packet_traits<float> : default_packet_traits
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- {
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- typedef float4 type;
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- typedef float4 half;
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- enum {
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- Vectorizable = 1,
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- AlignedOnScalar = 1,
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- size=4,
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- HasHalfPacket = 0,
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-
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- HasDiv = 1,
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- HasSin = 0,
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- HasCos = 0,
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- HasLog = 1,
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- HasExp = 1,
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- HasSqrt = 1,
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- HasRsqrt = 1,
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- HasLGamma = 1,
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- HasDiGamma = 1,
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- HasZeta = 1,
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- HasPolygamma = 1,
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- HasErf = 1,
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- HasErfc = 1,
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- HasIGamma = 1,
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- HasIGammac = 1,
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- HasBetaInc = 1,
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-
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- HasBlend = 0,
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- };
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- };
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-
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- template<> struct packet_traits<double> : default_packet_traits
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- {
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- typedef double2 type;
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- typedef double2 half;
59
- enum {
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- Vectorizable = 1,
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- AlignedOnScalar = 1,
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- size=2,
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- HasHalfPacket = 0,
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-
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- HasDiv = 1,
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- HasLog = 1,
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- HasExp = 1,
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- HasSqrt = 1,
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- HasRsqrt = 1,
70
- HasLGamma = 1,
71
- HasDiGamma = 1,
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- HasZeta = 1,
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- HasPolygamma = 1,
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- HasErf = 1,
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- HasErfc = 1,
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- HasIGamma = 1,
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- HasIGammac = 1,
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- HasBetaInc = 1,
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-
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- HasBlend = 0,
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- };
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- };
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-
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-
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- template<> struct unpacket_traits<float4> { typedef float type; enum {size=4, alignment=Aligned16}; typedef float4 half; };
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- template<> struct unpacket_traits<double2> { typedef double type; enum {size=2, alignment=Aligned16}; typedef double2 half; };
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-
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- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float4 pset1<float4>(const float& from) {
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- return make_float4(from, from, from, from);
90
- }
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- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE double2 pset1<double2>(const double& from) {
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- return make_double2(from, from);
93
- }
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-
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-
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- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float4 plset<float4>(const float& a) {
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- return make_float4(a, a+1, a+2, a+3);
98
- }
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- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE double2 plset<double2>(const double& a) {
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- return make_double2(a, a+1);
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- }
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-
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- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float4 padd<float4>(const float4& a, const float4& b) {
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- return make_float4(a.x+b.x, a.y+b.y, a.z+b.z, a.w+b.w);
105
- }
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- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE double2 padd<double2>(const double2& a, const double2& b) {
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- return make_double2(a.x+b.x, a.y+b.y);
108
- }
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-
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- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float4 psub<float4>(const float4& a, const float4& b) {
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- return make_float4(a.x-b.x, a.y-b.y, a.z-b.z, a.w-b.w);
112
- }
113
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE double2 psub<double2>(const double2& a, const double2& b) {
114
- return make_double2(a.x-b.x, a.y-b.y);
115
- }
116
-
117
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float4 pnegate(const float4& a) {
118
- return make_float4(-a.x, -a.y, -a.z, -a.w);
119
- }
120
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE double2 pnegate(const double2& a) {
121
- return make_double2(-a.x, -a.y);
122
- }
123
-
124
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float4 pconj(const float4& a) { return a; }
125
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE double2 pconj(const double2& a) { return a; }
126
-
127
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float4 pmul<float4>(const float4& a, const float4& b) {
128
- return make_float4(a.x*b.x, a.y*b.y, a.z*b.z, a.w*b.w);
129
- }
130
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE double2 pmul<double2>(const double2& a, const double2& b) {
131
- return make_double2(a.x*b.x, a.y*b.y);
132
- }
133
-
134
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float4 pdiv<float4>(const float4& a, const float4& b) {
135
- return make_float4(a.x/b.x, a.y/b.y, a.z/b.z, a.w/b.w);
136
- }
137
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE double2 pdiv<double2>(const double2& a, const double2& b) {
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- return make_double2(a.x/b.x, a.y/b.y);
139
- }
140
-
141
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float4 pmin<float4>(const float4& a, const float4& b) {
142
- return make_float4(fminf(a.x, b.x), fminf(a.y, b.y), fminf(a.z, b.z), fminf(a.w, b.w));
143
- }
144
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE double2 pmin<double2>(const double2& a, const double2& b) {
145
- return make_double2(fmin(a.x, b.x), fmin(a.y, b.y));
146
- }
147
-
148
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float4 pmax<float4>(const float4& a, const float4& b) {
149
- return make_float4(fmaxf(a.x, b.x), fmaxf(a.y, b.y), fmaxf(a.z, b.z), fmaxf(a.w, b.w));
150
- }
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- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE double2 pmax<double2>(const double2& a, const double2& b) {
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- return make_double2(fmax(a.x, b.x), fmax(a.y, b.y));
153
- }
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-
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- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float4 pload<float4>(const float* from) {
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- return *reinterpret_cast<const float4*>(from);
157
- }
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-
159
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE double2 pload<double2>(const double* from) {
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- return *reinterpret_cast<const double2*>(from);
161
- }
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-
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- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE float4 ploadu<float4>(const float* from) {
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- return make_float4(from[0], from[1], from[2], from[3]);
165
- }
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- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE double2 ploadu<double2>(const double* from) {
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- return make_double2(from[0], from[1]);
168
- }
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-
170
- template<> EIGEN_STRONG_INLINE float4 ploaddup<float4>(const float* from) {
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- return make_float4(from[0], from[0], from[1], from[1]);
172
- }
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- template<> EIGEN_STRONG_INLINE double2 ploaddup<double2>(const double* from) {
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- return make_double2(from[0], from[0]);
175
- }
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-
177
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void pstore<float>(float* to, const float4& from) {
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- *reinterpret_cast<float4*>(to) = from;
179
- }
180
-
181
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void pstore<double>(double* to, const double2& from) {
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- *reinterpret_cast<double2*>(to) = from;
183
- }
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-
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- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void pstoreu<float>(float* to, const float4& from) {
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- to[0] = from.x;
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- to[1] = from.y;
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- to[2] = from.z;
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- to[3] = from.w;
190
- }
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-
192
- template<> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void pstoreu<double>(double* to, const double2& from) {
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- to[0] = from.x;
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- to[1] = from.y;
195
- }
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-
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- template<>
198
- EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE float4 ploadt_ro<float4, Aligned>(const float* from) {
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- #if defined(__CUDA_ARCH__) && __CUDA_ARCH__ >= 350
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- return __ldg((const float4*)from);
201
- #else
202
- return make_float4(from[0], from[1], from[2], from[3]);
203
- #endif
204
- }
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- template<>
206
- EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE double2 ploadt_ro<double2, Aligned>(const double* from) {
207
- #if defined(__CUDA_ARCH__) && __CUDA_ARCH__ >= 350
208
- return __ldg((const double2*)from);
209
- #else
210
- return make_double2(from[0], from[1]);
211
- #endif
212
- }
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-
214
- template<>
215
- EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE float4 ploadt_ro<float4, Unaligned>(const float* from) {
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- #if defined(__CUDA_ARCH__) && __CUDA_ARCH__ >= 350
217
- return make_float4(__ldg(from+0), __ldg(from+1), __ldg(from+2), __ldg(from+3));
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- #else
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- return make_float4(from[0], from[1], from[2], from[3]);
220
- #endif
221
- }
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- template<>
223
- EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE double2 ploadt_ro<double2, Unaligned>(const double* from) {
224
- #if defined(__CUDA_ARCH__) && __CUDA_ARCH__ >= 350
225
- return make_double2(__ldg(from+0), __ldg(from+1));
226
- #else
227
- return make_double2(from[0], from[1]);
228
- #endif
229
- }
230
-
231
- template<> EIGEN_DEVICE_FUNC inline float4 pgather<float, float4>(const float* from, Index stride) {
232
- return make_float4(from[0*stride], from[1*stride], from[2*stride], from[3*stride]);
233
- }
234
-
235
- template<> EIGEN_DEVICE_FUNC inline double2 pgather<double, double2>(const double* from, Index stride) {
236
- return make_double2(from[0*stride], from[1*stride]);
237
- }
238
-
239
- template<> EIGEN_DEVICE_FUNC inline void pscatter<float, float4>(float* to, const float4& from, Index stride) {
240
- to[stride*0] = from.x;
241
- to[stride*1] = from.y;
242
- to[stride*2] = from.z;
243
- to[stride*3] = from.w;
244
- }
245
- template<> EIGEN_DEVICE_FUNC inline void pscatter<double, double2>(double* to, const double2& from, Index stride) {
246
- to[stride*0] = from.x;
247
- to[stride*1] = from.y;
248
- }
249
-
250
- template<> EIGEN_DEVICE_FUNC inline float pfirst<float4>(const float4& a) {
251
- return a.x;
252
- }
253
- template<> EIGEN_DEVICE_FUNC inline double pfirst<double2>(const double2& a) {
254
- return a.x;
255
- }
256
-
257
- template<> EIGEN_DEVICE_FUNC inline float predux<float4>(const float4& a) {
258
- return a.x + a.y + a.z + a.w;
259
- }
260
- template<> EIGEN_DEVICE_FUNC inline double predux<double2>(const double2& a) {
261
- return a.x + a.y;
262
- }
263
-
264
- template<> EIGEN_DEVICE_FUNC inline float predux_max<float4>(const float4& a) {
265
- return fmaxf(fmaxf(a.x, a.y), fmaxf(a.z, a.w));
266
- }
267
- template<> EIGEN_DEVICE_FUNC inline double predux_max<double2>(const double2& a) {
268
- return fmax(a.x, a.y);
269
- }
270
-
271
- template<> EIGEN_DEVICE_FUNC inline float predux_min<float4>(const float4& a) {
272
- return fminf(fminf(a.x, a.y), fminf(a.z, a.w));
273
- }
274
- template<> EIGEN_DEVICE_FUNC inline double predux_min<double2>(const double2& a) {
275
- return fmin(a.x, a.y);
276
- }
277
-
278
- template<> EIGEN_DEVICE_FUNC inline float predux_mul<float4>(const float4& a) {
279
- return a.x * a.y * a.z * a.w;
280
- }
281
- template<> EIGEN_DEVICE_FUNC inline double predux_mul<double2>(const double2& a) {
282
- return a.x * a.y;
283
- }
284
-
285
- template<> EIGEN_DEVICE_FUNC inline float4 pabs<float4>(const float4& a) {
286
- return make_float4(fabsf(a.x), fabsf(a.y), fabsf(a.z), fabsf(a.w));
287
- }
288
- template<> EIGEN_DEVICE_FUNC inline double2 pabs<double2>(const double2& a) {
289
- return make_double2(fabs(a.x), fabs(a.y));
290
- }
291
-
292
- EIGEN_DEVICE_FUNC inline void
293
- ptranspose(PacketBlock<float4,4>& kernel) {
294
- float tmp = kernel.packet[0].y;
295
- kernel.packet[0].y = kernel.packet[1].x;
296
- kernel.packet[1].x = tmp;
297
-
298
- tmp = kernel.packet[0].z;
299
- kernel.packet[0].z = kernel.packet[2].x;
300
- kernel.packet[2].x = tmp;
301
-
302
- tmp = kernel.packet[0].w;
303
- kernel.packet[0].w = kernel.packet[3].x;
304
- kernel.packet[3].x = tmp;
305
-
306
- tmp = kernel.packet[1].z;
307
- kernel.packet[1].z = kernel.packet[2].y;
308
- kernel.packet[2].y = tmp;
309
-
310
- tmp = kernel.packet[1].w;
311
- kernel.packet[1].w = kernel.packet[3].y;
312
- kernel.packet[3].y = tmp;
313
-
314
- tmp = kernel.packet[2].w;
315
- kernel.packet[2].w = kernel.packet[3].z;
316
- kernel.packet[3].z = tmp;
317
- }
318
-
319
- EIGEN_DEVICE_FUNC inline void
320
- ptranspose(PacketBlock<double2,2>& kernel) {
321
- double tmp = kernel.packet[0].y;
322
- kernel.packet[0].y = kernel.packet[1].x;
323
- kernel.packet[1].x = tmp;
324
- }
325
-
326
- #endif
327
-
328
- } // end namespace internal
329
-
330
- } // end namespace Eigen
331
-
332
-
333
- #endif // EIGEN_PACKET_MATH_CUDA_H