sequenceserver 2.0.0.rc7 → 2.0.0.rc8

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Files changed (530) hide show
  1. checksums.yaml +4 -4
  2. data/bin/chromedriver +0 -0
  3. data/bin/geckodriver +0 -0
  4. data/bin/sequenceserver +31 -4
  5. data/lib/sequenceserver.rb +6 -1
  6. data/lib/sequenceserver/database.rb +7 -42
  7. data/lib/sequenceserver/exceptions.rb +14 -0
  8. data/lib/sequenceserver/makeblastdb.rb +121 -41
  9. data/lib/sequenceserver/routes.rb +1 -1
  10. data/lib/sequenceserver/version.rb +1 -1
  11. data/public/css/sequenceserver.css +8 -2
  12. data/public/css/sequenceserver.min.css +1 -1
  13. data/public/js/jquery_world.js +1 -1
  14. data/public/js/report.js +1 -2
  15. data/public/js/search.js +40 -18
  16. data/public/js/sidebar.js +50 -26
  17. data/public/sequenceserver-report.min.js +17 -17
  18. data/public/sequenceserver-search.min.js +2 -2
  19. data/views/layout.erb +1 -1
  20. data/views/report.erb +1 -1
  21. data/views/search.erb +1 -1
  22. metadata +4 -510
  23. data/.bootstrap/config.json +0 -433
  24. data/.codeclimate.yml +0 -31
  25. data/.csslintrc +0 -2
  26. data/.dockerignore +0 -1
  27. data/.eslintignore +0 -1
  28. data/.eslintrc.json +0 -36
  29. data/.gitignore +0 -56
  30. data/.mailmap +0 -5
  31. data/.rspec +0 -3
  32. data/.rubocop.yml +0 -61
  33. data/.travis.yml +0 -74
  34. data/AppImage/recipe.yml +0 -15
  35. data/AppImage/sequenceserver.desktop +0 -8
  36. data/AppImage/sequenceserver.png +0 -0
  37. data/AppImage/sequenceserver.sh +0 -16
  38. data/Dockerfile +0 -25
  39. data/LICENSE.txt +0 -661
  40. data/LICENSE/Apache.txt +0 -176
  41. data/LICENSE/d3.txt +0 -26
  42. data/README.md +0 -161
  43. data/package.json +0 -48
  44. data/public/vendor/.dependencies.json +0 -18
  45. data/public/vendor/.loaderversions +0 -1
  46. data/public/vendor/github/components/jquery@2.1.4/.gitignore +0 -1
  47. data/public/vendor/github/components/jquery@2.1.4/.jspm-hash +0 -1
  48. data/public/vendor/github/components/jquery@2.1.4/.jspm.json +0 -37
  49. data/public/vendor/github/components/jqueryui@1.11.4/.gitignore +0 -4
  50. data/public/vendor/github/components/jqueryui@1.11.4/.jspm-hash +0 -1
  51. data/public/vendor/github/components/jqueryui@1.11.4/.jspm.json +0 -136
  52. data/public/vendor/github/components/jqueryui@1.11.4/ui/.jshintrc +0 -24
  53. data/public/vendor/github/jspm/nodelibs-buffer@0.1.0/.jspm-hash +0 -1
  54. data/public/vendor/github/jspm/nodelibs-buffer@0.1.0/.jspm.json +0 -10
  55. data/public/vendor/github/jspm/nodelibs-events@0.1.1/.jspm-hash +0 -1
  56. data/public/vendor/github/jspm/nodelibs-events@0.1.1/.jspm.json +0 -10
  57. data/public/vendor/github/jspm/nodelibs-fs@0.1.2/.jspm-hash +0 -1
  58. data/public/vendor/github/jspm/nodelibs-module@0.1.0/.jspm-hash +0 -1
  59. data/public/vendor/github/jspm/nodelibs-module@0.1.0/.jspm.json +0 -3
  60. data/public/vendor/github/jspm/nodelibs-path@0.1.0/.jspm-hash +0 -1
  61. data/public/vendor/github/jspm/nodelibs-path@0.1.0/.jspm.json +0 -10
  62. data/public/vendor/github/jspm/nodelibs-process@0.1.1/.jspm-hash +0 -1
  63. data/public/vendor/github/jspm/nodelibs-stream@0.1.0/.jspm-hash +0 -1
  64. data/public/vendor/github/jspm/nodelibs-stream@0.1.0/.jspm.json +0 -10
  65. data/public/vendor/github/jspm/nodelibs-util@0.1.0/.jspm-hash +0 -1
  66. data/public/vendor/github/jspm/nodelibs-util@0.1.0/.jspm.json +0 -10
  67. data/public/vendor/github/mbostock/d3@3.5.6/.jspm-hash +0 -1
  68. data/public/vendor/github/mbostock/d3@3.5.6/.jspm.json +0 -76
  69. data/public/vendor/github/nicgirault/circosJs@1.7.0/.gitignore +0 -10
  70. data/public/vendor/github/nicgirault/circosJs@1.7.0/.jspm-hash +0 -1
  71. data/public/vendor/github/systemjs/plugin-css@0.1.15/.gitignore +0 -1
  72. data/public/vendor/github/systemjs/plugin-css@0.1.15/.jspm-hash +0 -1
  73. data/public/vendor/github/systemjs/plugin-css@0.1.15/.jspm.json +0 -4
  74. data/public/vendor/github/systemjs/plugin-json@0.1.0/.jspm-hash +0 -1
  75. data/public/vendor/github/twbs/bootstrap@3.3.5/.jspm-hash +0 -1
  76. data/public/vendor/github/twbs/bootstrap@3.3.5/.jspm.json +0 -100
  77. data/public/vendor/npm/amdefine@1.0.0/.jspm-hash +0 -1
  78. data/public/vendor/npm/amdefine@1.0.0/.jspm.json +0 -55
  79. data/public/vendor/npm/babel-core@5.8.23/.jspm-hash +0 -1
  80. data/public/vendor/npm/babel-runtime@5.8.20/.jspm-hash +0 -1
  81. data/public/vendor/npm/babel-runtime@5.8.20/.npmignore +0 -2
  82. data/public/vendor/npm/base62@0.1.1/.jspm-hash +0 -1
  83. data/public/vendor/npm/base62@0.1.1/.jspm.json +0 -49
  84. data/public/vendor/npm/base62@0.1.1/.travis.yml +0 -4
  85. data/public/vendor/npm/base64-js@0.0.8/.jspm-hash +0 -1
  86. data/public/vendor/npm/base64-js@0.0.8/.jspm.json +0 -77
  87. data/public/vendor/npm/base64-js@0.0.8/.travis.yml +0 -5
  88. data/public/vendor/npm/buffer@3.4.3/.jspm-hash +0 -1
  89. data/public/vendor/npm/buffer@3.4.3/.jspm.json +0 -105
  90. data/public/vendor/npm/buffer@3.4.3/.npmignore +0 -1
  91. data/public/vendor/npm/buffer@3.4.3/.travis.yml +0 -8
  92. data/public/vendor/npm/buffer@3.4.3/.zuul.yml +0 -20
  93. data/public/vendor/npm/core-js@1.1.2/.eslintrc +0 -36
  94. data/public/vendor/npm/core-js@1.1.2/.gitattributes +0 -1
  95. data/public/vendor/npm/core-js@1.1.2/.jspm-hash +0 -1
  96. data/public/vendor/npm/core-js@1.1.2/.npmignore +0 -10
  97. data/public/vendor/npm/core-js@1.1.2/.travis.yml +0 -3
  98. data/public/vendor/npm/core-util-is@1.0.1/.jspm-hash +0 -1
  99. data/public/vendor/npm/core-util-is@1.0.1/.jspm.json +0 -58
  100. data/public/vendor/npm/envify@3.4.0/.jspm-hash +0 -1
  101. data/public/vendor/npm/envify@3.4.0/.jspm.json +0 -72
  102. data/public/vendor/npm/envify@3.4.0/.npmignore +0 -2
  103. data/public/vendor/npm/esprima-fb@13001.1001.0-dev-harmony-fb/.jspm-hash +0 -1
  104. data/public/vendor/npm/esprima-fb@13001.1001.0-dev-harmony-fb/.jspm.json +0 -102
  105. data/public/vendor/npm/events@1.0.2/.jspm-hash +0 -1
  106. data/public/vendor/npm/events@1.0.2/.jspm.json +0 -67
  107. data/public/vendor/npm/events@1.0.2/.npmignore +0 -1
  108. data/public/vendor/npm/events@1.0.2/.travis.yml +0 -7
  109. data/public/vendor/npm/events@1.0.2/.zuul.yml +0 -12
  110. data/public/vendor/npm/font-awesome@4.4.0/.jspm-hash +0 -1
  111. data/public/vendor/npm/font-awesome@4.4.0/.jspm.json +0 -81
  112. data/public/vendor/npm/font-awesome@4.4.0/.npmignore +0 -42
  113. data/public/vendor/npm/ieee754@1.1.6/.jspm-hash +0 -1
  114. data/public/vendor/npm/ieee754@1.1.6/.jspm.json +0 -70
  115. data/public/vendor/npm/ieee754@1.1.6/.travis.yml +0 -7
  116. data/public/vendor/npm/ieee754@1.1.6/.zuul.yml +0 -20
  117. data/public/vendor/npm/inherits@2.0.1/.jspm-hash +0 -1
  118. data/public/vendor/npm/inherits@2.0.1/.jspm.json +0 -60
  119. data/public/vendor/npm/is-array@1.0.1/.jepso-ci.json +0 -3
  120. data/public/vendor/npm/is-array@1.0.1/.jspm-hash +0 -1
  121. data/public/vendor/npm/is-array@1.0.1/.jspm.json +0 -42
  122. data/public/vendor/npm/is-array@1.0.1/.npmignore +0 -0
  123. data/public/vendor/npm/isarray@0.0.1/.jspm-hash +0 -1
  124. data/public/vendor/npm/isarray@0.0.1/.jspm.json +0 -51
  125. data/public/vendor/npm/jstransform@10.1.0/.jshintrc +0 -28
  126. data/public/vendor/npm/jstransform@10.1.0/.jspm-hash +0 -1
  127. data/public/vendor/npm/jstransform@10.1.0/.jspm.json +0 -95
  128. data/public/vendor/npm/jstransform@10.1.0/.npmignore +0 -4
  129. data/public/vendor/npm/jstransform@10.1.0/.travis.yml +0 -8
  130. data/public/vendor/npm/path-browserify@0.0.0/.jspm-hash +0 -1
  131. data/public/vendor/npm/path-browserify@0.0.0/.jspm.json +0 -56
  132. data/public/vendor/npm/process@0.10.1/.jspm-hash +0 -1
  133. data/public/vendor/npm/react@0.13.3/.jspm-hash +0 -1
  134. data/public/vendor/npm/react@0.13.3/.jspm.json +0 -77
  135. data/public/vendor/npm/readable-stream@1.1.13/.jspm-hash +0 -1
  136. data/public/vendor/npm/readable-stream@1.1.13/.jspm.json +0 -95
  137. data/public/vendor/npm/readable-stream@1.1.13/.npmignore +0 -5
  138. data/public/vendor/npm/source-map@0.1.31/.jspm-hash +0 -1
  139. data/public/vendor/npm/source-map@0.1.31/.jspm.json +0 -133
  140. data/public/vendor/npm/source-map@0.1.31/.npmignore +0 -2
  141. data/public/vendor/npm/source-map@0.1.31/.travis.yml +0 -4
  142. data/public/vendor/npm/stream-browserify@1.0.0/.jspm-hash +0 -1
  143. data/public/vendor/npm/stream-browserify@1.0.0/.jspm.json +0 -77
  144. data/public/vendor/npm/stream-browserify@1.0.0/.travis.yml +0 -4
  145. data/public/vendor/npm/string_decoder@0.10.31/.jspm-hash +0 -1
  146. data/public/vendor/npm/string_decoder@0.10.31/.jspm.json +0 -58
  147. data/public/vendor/npm/string_decoder@0.10.31/.npmignore +0 -2
  148. data/public/vendor/npm/through@2.3.8/.jspm-hash +0 -1
  149. data/public/vendor/npm/through@2.3.8/.jspm.json +0 -72
  150. data/public/vendor/npm/through@2.3.8/.travis.yml +0 -5
  151. data/public/vendor/npm/underscore@1.8.3/.jspm-hash +0 -1
  152. data/public/vendor/npm/underscore@1.8.3/.jspm.json +0 -74
  153. data/public/vendor/npm/util@0.10.3/.jspm-hash +0 -1
  154. data/public/vendor/npm/util@0.10.3/.jspm.json +0 -58
  155. data/public/vendor/npm/util@0.10.3/.npmignore +0 -1
  156. data/public/vendor/npm/util@0.10.3/.travis.yml +0 -8
  157. data/public/vendor/npm/util@0.10.3/.zuul.yml +0 -10
  158. data/public/vendor/npm/webshim@1.15.8/.gitattributes +0 -12
  159. data/public/vendor/npm/webshim@1.15.8/.jspm-hash +0 -1
  160. data/public/vendor/npm/webshim@1.15.8/.jspm.json +0 -92
  161. data/public/vendor/npm/webshim@1.15.8/.npmignore +0 -16
  162. data/public/vendor/npm/webshim@1.15.8/.project +0 -12
  163. data/public/vendor/npm/webshim@1.15.8/demos/demos/filereader/upload/.keep +0 -0
  164. data/sequenceserver.gemspec +0 -55
  165. data/spec/blast_versions/blast_2.2.30/blast_2.2.30_spec.rb +0 -228
  166. data/spec/blast_versions/blast_2.2.30/import_spec_capybara_local_2.2.30.rb +0 -583
  167. data/spec/blast_versions/blast_2.2.31/blast_2.2.31_spec.rb +0 -228
  168. data/spec/blast_versions/blast_2.2.31/import_spec_capybara_local_2.2.31.rb +0 -587
  169. data/spec/blast_versions/blast_2.3.0/blast_2.3.0_spec.rb +0 -229
  170. data/spec/blast_versions/blast_2.3.0/import_spec_capybara_local_2.3.0.rb +0 -587
  171. data/spec/blast_versions/blast_2.4.0/blast_2.4.0_spec.rb +0 -228
  172. data/spec/blast_versions/blast_2.4.0/import_spec_capybara_local_2.4.0.rb +0 -588
  173. data/spec/blast_versions/blast_2.5.0/blast_2.5.0_spec.rb +0 -228
  174. data/spec/blast_versions/blast_2.5.0/import_spec_capybara_local_2.5.0.rb +0 -587
  175. data/spec/blast_versions/blast_2.6.0/blast_2.6.0_spec.rb +0 -228
  176. data/spec/blast_versions/blast_2.6.0/import_spec_capybara_local_2.6.0.rb +0 -587
  177. data/spec/blast_versions/blast_2.7.1/blast_2.7.1_spec.rb +0 -228
  178. data/spec/blast_versions/blast_2.7.1/import_spec_capybara_local_2.7.1.rb +0 -587
  179. data/spec/blast_versions/blast_2.8.1/blast_2.8.1_spec.rb +0 -228
  180. data/spec/blast_versions/blast_2.8.1/import_spec_capybara_local_2.8.1.rb +0 -587
  181. data/spec/blast_versions/blast_2.9.0/blast_2.9.0_spec.rb +0 -228
  182. data/spec/blast_versions/blast_2.9.0/import_spec_capybara_local_2.9.0.rb +0 -585
  183. data/spec/blast_versions/diamond_0.9.24/diamond_0.9.24_spec.rb +0 -176
  184. data/spec/blast_versions/diamond_0.9.24/import_spec_capybara_local_0.9.24.rb +0 -237
  185. data/spec/capybara_spec.rb +0 -345
  186. data/spec/config_spec.rb +0 -87
  187. data/spec/database/funky_ids/funky_ids.fa +0 -16
  188. data/spec/database/funky_ids/v4/funky_ids.fa.nhd +0 -8
  189. data/spec/database/funky_ids/v4/funky_ids.fa.nhi +0 -0
  190. data/spec/database/funky_ids/v4/funky_ids.fa.nhr +0 -0
  191. data/spec/database/funky_ids/v4/funky_ids.fa.nin +0 -0
  192. data/spec/database/funky_ids/v4/funky_ids.fa.nog +0 -0
  193. data/spec/database/funky_ids/v4/funky_ids.fa.nsd +0 -15
  194. data/spec/database/funky_ids/v4/funky_ids.fa.nsi +0 -0
  195. data/spec/database/funky_ids/v4/funky_ids.fa.nsq +0 -0
  196. data/spec/database/funky_ids/v5/funky_ids.fa.ndb +0 -0
  197. data/spec/database/funky_ids/v5/funky_ids.fa.nhd +0 -8
  198. data/spec/database/funky_ids/v5/funky_ids.fa.nhi +0 -0
  199. data/spec/database/funky_ids/v5/funky_ids.fa.nhr +0 -0
  200. data/spec/database/funky_ids/v5/funky_ids.fa.nin +0 -0
  201. data/spec/database/funky_ids/v5/funky_ids.fa.nog +0 -0
  202. data/spec/database/funky_ids/v5/funky_ids.fa.nos +0 -0
  203. data/spec/database/funky_ids/v5/funky_ids.fa.not +0 -0
  204. data/spec/database/funky_ids/v5/funky_ids.fa.nsq +0 -0
  205. data/spec/database/funky_ids/v5/funky_ids.fa.ntf +0 -0
  206. data/spec/database/funky_ids/v5/funky_ids.fa.nto +0 -0
  207. data/spec/database/funky_sequences/README.md +0 -14
  208. data/spec/database/funky_sequences/funky_aa_sequences.fa +0 -7
  209. data/spec/database/funky_sequences/funky_aa_sequences.fa.phd +0 -3
  210. data/spec/database/funky_sequences/funky_aa_sequences.fa.phi +0 -0
  211. data/spec/database/funky_sequences/funky_aa_sequences.fa.phr +0 -0
  212. data/spec/database/funky_sequences/funky_aa_sequences.fa.pin +0 -0
  213. data/spec/database/funky_sequences/funky_aa_sequences.fa.pog +0 -0
  214. data/spec/database/funky_sequences/funky_aa_sequences.fa.psd +0 -6
  215. data/spec/database/funky_sequences/funky_aa_sequences.fa.psi +0 -0
  216. data/spec/database/funky_sequences/funky_aa_sequences.fa.psq +0 -0
  217. data/spec/database/funky_sequences/funky_na_sequences.fa +0 -2
  218. data/spec/database/funky_sequences/funky_na_sequences.fa.nhr +0 -0
  219. data/spec/database/funky_sequences/funky_na_sequences.fa.nin +0 -0
  220. data/spec/database/funky_sequences/funky_na_sequences.fa.nog +0 -0
  221. data/spec/database/funky_sequences/funky_na_sequences.fa.nsd +0 -2
  222. data/spec/database/funky_sequences/funky_na_sequences.fa.nsi +0 -0
  223. data/spec/database/funky_sequences/funky_na_sequences.fa.nsq +0 -0
  224. data/spec/database/ox_parse_error/query.fa +0 -1
  225. data/spec/database/ox_parse_error/rand1.fa +0 -2
  226. data/spec/database/ox_parse_error/rand1.fa.nhd +0 -1
  227. data/spec/database/ox_parse_error/rand1.fa.nhi +0 -0
  228. data/spec/database/ox_parse_error/rand1.fa.nhr +0 -0
  229. data/spec/database/ox_parse_error/rand1.fa.nin +0 -0
  230. data/spec/database/ox_parse_error/rand1.fa.nog +0 -0
  231. data/spec/database/ox_parse_error/rand1.fa.nsd +0 -2
  232. data/spec/database/ox_parse_error/rand1.fa.nsi +0 -0
  233. data/spec/database/ox_parse_error/rand1.fa.nsq +0 -0
  234. data/spec/database/ox_parse_error/rand2.fa +0 -2
  235. data/spec/database/ox_parse_error/rand2.fa.nhd +0 -1
  236. data/spec/database/ox_parse_error/rand2.fa.nhi +0 -0
  237. data/spec/database/ox_parse_error/rand2.fa.nhr +0 -0
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  240. data/spec/database/ox_parse_error/rand2.fa.nsd +0 -2
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  242. data/spec/database/ox_parse_error/rand2.fa.nsq +0 -0
  243. data/spec/database/ox_parse_error_unique_ids/query.fa +0 -1
  244. data/spec/database/ox_parse_error_unique_ids/rand1.fa +0 -2
  245. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nhd +0 -1
  246. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nhi +0 -0
  247. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nhr +0 -0
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  249. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nog +0 -0
  250. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nsd +0 -2
  251. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nsi +0 -0
  252. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nsq +0 -0
  253. data/spec/database/ox_parse_error_unique_ids/rand2.fa +0 -2
  254. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nhd +0 -1
  255. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nhi +0 -0
  256. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nhr +0 -0
  257. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nin +0 -0
  258. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nog +0 -0
  259. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nsd +0 -2
  260. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nsi +0 -0
  261. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nsq +0 -0
  262. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa +0 -6
  263. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nhd +0 -1
  264. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nhi +0 -0
  265. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nhr +0 -0
  266. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nin +0 -0
  267. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nog +0 -0
  268. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nsd +0 -2
  269. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nsi +0 -0
  270. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nsq +0 -0
  271. data/spec/database/sample/genome/Solenopsis_invicta/Solenopsis_invicta_gnG_subset.fasta.ndb +0 -0
  272. data/spec/database/sample/genome/Solenopsis_invicta/Solenopsis_invicta_gnG_subset.fasta.nhd +0 -8
  273. data/spec/database/sample/genome/Solenopsis_invicta/Solenopsis_invicta_gnG_subset.fasta.nhi +0 -0
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  481. data/spec/dotdir/diamond_0.9.24/blastx/job.yaml +0 -8
  482. data/spec/dotdir/diamond_0.9.24/blastx_nohits/DIAMOND_BLASTX_NOHITS_0.9.24.xml +0 -41
  483. data/spec/dotdir/diamond_0.9.24/blastx_nohits/job.yaml +0 -8
  484. data/spec/download_helper.rb +0 -35
  485. data/spec/empty_config.yml +0 -0
  486. data/spec/makeblastdb_spec.rb +0 -121
  487. data/spec/routes_spec.rb +0 -93
  488. data/spec/sample.conf +0 -2
  489. data/spec/sequence_spec.rb +0 -99
  490. data/spec/sequences/MH011443_1_gi_1486783306_gb_MH011443_1.txt +0 -6
  491. data/spec/sequences/MH011443_1_gi_1486783307_gb_AYF55702_1.txt +0 -6
  492. data/spec/sequences/MH011443_1_gi_1528997474_gb_MH447967_1.txt +0 -30
  493. data/spec/sequences/MH011443_1_sp_P04637_P53_HUMAN.txt +0 -6
  494. data/spec/sequences/Nucleotide_TP53_COX41.fasta +0 -15
  495. data/spec/sequences/Protein_TP53_COX41.fasta +0 -12
  496. data/spec/sequences/Query_1_SI2_2_0_06267.txt +0 -6
  497. data/spec/sequences/alignment-2_hits.txt +0 -12
  498. data/spec/sequences/alignment-35_hits_diamond_blastp.txt +0 -210
  499. data/spec/sequences/alignment-35_hits_diamond_blastx.txt +0 -210
  500. data/spec/sequences/alignment-3_hits.txt +0 -18
  501. data/spec/sequences/alignment-40_hits_blastn.txt +0 -246
  502. data/spec/sequences/alignment-40_hits_blastp.txt +0 -240
  503. data/spec/sequences/alignment-40_hits_blastp_2.2.30.txt +0 -240
  504. data/spec/sequences/alignment-40_hits_blastx.txt +0 -240
  505. data/spec/sequences/alignment-40_hits_tblastn.txt +0 -240
  506. data/spec/sequences/alignment-40_hits_tblastn_2.2.30.txt +0 -240
  507. data/spec/sequences/alignment-40_hits_tblastx.txt +0 -2664
  508. data/spec/sequences/alignment-4_hits.txt +0 -24
  509. data/spec/sequences/alignment-4_hits_blastn.txt +0 -24
  510. data/spec/sequences/alignment-4_hits_blastp.txt +0 -24
  511. data/spec/sequences/alignment-4_hits_blastp_2.2.30.txt +0 -24
  512. data/spec/sequences/alignment-4_hits_blastx.txt +0 -24
  513. data/spec/sequences/alignment-4_hits_diamond_blastp.txt +0 -24
  514. data/spec/sequences/alignment-4_hits_diamond_blastx.txt +0 -24
  515. data/spec/sequences/alignment-4_hits_tblastn.txt +0 -24
  516. data/spec/sequences/alignment-4_hits_tblastn_2.2.30.txt +0 -24
  517. data/spec/sequences/alignment-4_hits_tblastx.txt +0 -318
  518. data/spec/sequences/nucleotide_query.fa +0 -21
  519. data/spec/sequences/problematic_query.fa +0 -5
  520. data/spec/sequences/protein_query.fa +0 -9
  521. data/spec/sequences/sample_query_fire_ant_obps.fa +0 -44
  522. data/spec/sequences/sequenceserver-2_hits.fa +0 -10
  523. data/spec/sequences/sequenceserver-SI2.2.0_06267.fa +0 -5
  524. data/spec/sequences/sp_P04637_P53_HUMAN_gi_1099170394_ref_XP_018868681_1.txt +0 -6
  525. data/spec/sequences/sp_P04637_P53_HUMAN_gi_120407068_ref_NP_000537_3.txt +0 -6
  526. data/spec/sequences/sp_P04637_P53_HUMAN_gi_1484127324_gb_MG595988_1.txt +0 -6
  527. data/spec/sequences/sp_P04637_P53_HUMAN_gi_395440626_gb_JQ694049_1.txt +0 -6
  528. data/spec/sequences/sp_P04637_P53_HUMAN_sp_P04637_P53_HUMAN.txt +0 -6
  529. data/spec/sequenceserver_spec.rb +0 -90
  530. data/spec/spec_helper.rb +0 -63
data/spec/dotdir/blast_2.7.1/blastn/job.yaml DELETED
@@ -1,8 +0,0 @@
1
- --- !ruby/object:SequenceServer::BLAST::Job
2
- id: 'blast_2.7.1/blastn'
3
- submitted_at: 2019-06-23 13:36:09.744957200 +01:00
4
- imported_xml_file: BLASTN_XML_2.7.1.xml
5
- advanced_params: {}
6
- databases: []
7
- completed_at: 2019-06-23 13:36:09.766294600 +01:00
8
- exitstatus: 0
data/spec/dotdir/blast_2.7.1/blastn_nohits/BLASTN_NO_HITS_XML_2.7.1.xml DELETED
@@ -1,866 +0,0 @@
1
- <?xml version="1.0"?>
2
- <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
3
- <BlastOutput>
4
- <BlastOutput_program>blastn</BlastOutput_program>
5
- <BlastOutput_version>BLASTN 2.7.1+</BlastOutput_version>
6
- <BlastOutput_reference>Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), &quot;A greedy algorithm for aligning DNA sequences&quot;, J Comput Biol 2000; 7(1-2):203-14.</BlastOutput_reference>
7
- <BlastOutput_db>nt_db/nt</BlastOutput_db>
8
- <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
9
- <BlastOutput_query-def>No definition line</BlastOutput_query-def>
10
- <BlastOutput_query-len>703</BlastOutput_query-len>
11
- <BlastOutput_param>
12
- <Parameters>
13
- <Parameters_expect>10</Parameters_expect>
14
- <Parameters_sc-match>1</Parameters_sc-match>
15
- <Parameters_sc-mismatch>-2</Parameters_sc-mismatch>
16
- <Parameters_gap-open>0</Parameters_gap-open>
17
- <Parameters_gap-extend>0</Parameters_gap-extend>
18
- <Parameters_filter>L;m;</Parameters_filter>
19
- </Parameters>
20
- </BlastOutput_param>
21
- <BlastOutput_iterations>
22
- <Iteration>
23
- <Iteration_iter-num>1</Iteration_iter-num>
24
- <Iteration_query-ID>Query_1</Iteration_query-ID>
25
- <Iteration_query-def>No definition line</Iteration_query-def>
26
- <Iteration_query-len>703</Iteration_query-len>
27
- <Iteration_hits>
28
- </Iteration_hits>
29
- <Iteration_stat>
30
- <Statistics>
31
- <Statistics_db-num>52085306</Statistics_db-num>
32
- <Statistics_db-len>214274604493</Statistics_db-len>
33
- <Statistics_hsp-len>35</Statistics_hsp-len>
34
- <Statistics_eff-space>141917681347044</Statistics_eff-space>
35
- <Statistics_kappa>0.46</Statistics_kappa>
36
- <Statistics_lambda>1.28</Statistics_lambda>
37
- <Statistics_entropy>0.85</Statistics_entropy>
38
- </Statistics>
39
- </Iteration_stat>
40
- <Iteration_message>No hits found</Iteration_message>
41
- </Iteration>
42
- <Iteration>
43
- <Iteration_iter-num>2</Iteration_iter-num>
44
- <Iteration_query-ID>Query_2</Iteration_query-ID>
45
- <Iteration_query-def>SI2.2.0_13722 Si_gnF.scaffold06207[1925625..1928536].pep_1</Iteration_query-def>
46
- <Iteration_query-len>558</Iteration_query-len>
47
- <Iteration_hits>
48
- <Hit>
49
- <Hit_num>1</Hit_num>
50
- <Hit_id>gi|1465601839|ref|XM_011168454.2|</Hit_id>
51
- <Hit_def>PREDICTED: Solenopsis invicta LIRP (LOC105200753), mRNA</Hit_def>
52
- <Hit_accession>XM_011168454</Hit_accession>
53
- <Hit_len>3851</Hit_len>
54
- <Hit_hsps>
55
- <Hsp>
56
- <Hsp_num>1</Hsp_num>
57
- <Hsp_bit-score>409.23</Hsp_bit-score>
58
- <Hsp_score>221</Hsp_score>
59
- <Hsp_evalue>7.18179e-110</Hsp_evalue>
60
- <Hsp_query-from>1</Hsp_query-from>
61
- <Hsp_query-to>221</Hsp_query-to>
62
- <Hsp_hit-from>1018</Hsp_hit-from>
63
- <Hsp_hit-to>1238</Hsp_hit-to>
64
- <Hsp_query-frame>1</Hsp_query-frame>
65
- <Hsp_hit-frame>1</Hsp_hit-frame>
66
- <Hsp_identity>221</Hsp_identity>
67
- <Hsp_positive>221</Hsp_positive>
68
- <Hsp_gaps>0</Hsp_gaps>
69
- <Hsp_align-len>221</Hsp_align-len>
70
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAGA</Hsp_qseq>
71
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAGA</Hsp_hseq>
72
- <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
73
- </Hsp>
74
- <Hsp>
75
- <Hsp_num>2</Hsp_num>
76
- <Hsp_bit-score>368.604</Hsp_bit-score>
77
- <Hsp_score>199</Hsp_score>
78
- <Hsp_evalue>1.21889e-97</Hsp_evalue>
79
- <Hsp_query-from>360</Hsp_query-from>
80
- <Hsp_query-to>558</Hsp_query-to>
81
- <Hsp_hit-from>1236</Hsp_hit-from>
82
- <Hsp_hit-to>1434</Hsp_hit-to>
83
- <Hsp_query-frame>1</Hsp_query-frame>
84
- <Hsp_hit-frame>1</Hsp_hit-frame>
85
- <Hsp_identity>199</Hsp_identity>
86
- <Hsp_positive>199</Hsp_positive>
87
- <Hsp_gaps>0</Hsp_gaps>
88
- <Hsp_align-len>199</Hsp_align-len>
89
- <Hsp_qseq>AGAGATGGAAATGGCCGATTACCCGCTCGCCTATGATATTTCCCCGTATCTTCCGCCGTTCCTGTCGCGAGCGAGGGCACGGGGAATGTTAGACGGTCGCTTCGCCGGCAGACGCTACCGAAGGGAGTCGCGGGGCATTCACGAGGAGTGTTGCATCAACGGATGTACGATAAACGAATTGACCAGCTACTGCGGCCCC</Hsp_qseq>
90
- <Hsp_hseq>AGAGATGGAAATGGCCGATTACCCGCTCGCCTATGATATTTCCCCGTATCTTCCGCCGTTCCTGTCGCGAGCGAGGGCACGGGGAATGTTAGACGGTCGCTTCGCCGGCAGACGCTACCGAAGGGAGTCGCGGGGCATTCACGAGGAGTGTTGCATCAACGGATGTACGATAAACGAATTGACCAGCTACTGCGGCCCC</Hsp_hseq>
91
- <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
92
- </Hsp>
93
- </Hit_hsps>
94
- </Hit>
95
- <Hit>
96
- <Hit_num>2</Hit_num>
97
- <Hit_id>gi|1580165348|ref|XM_012674223.2|</Hit_id>
98
- <Hit_def>PREDICTED: Monomorium pharaonis LIRP (LOC105832901), transcript variant X2, mRNA</Hit_def>
99
- <Hit_accession>XM_012674223</Hit_accession>
100
- <Hit_len>2896</Hit_len>
101
- <Hit_hsps>
102
- <Hsp>
103
- <Hsp_num>1</Hsp_num>
104
- <Hsp_bit-score>364.91</Hsp_bit-score>
105
- <Hsp_score>197</Hsp_score>
106
- <Hsp_evalue>1.57674e-96</Hsp_evalue>
107
- <Hsp_query-from>1</Hsp_query-from>
108
- <Hsp_query-to>221</Hsp_query-to>
109
- <Hsp_hit-from>152</Hsp_hit-from>
110
- <Hsp_hit-to>372</Hsp_hit-to>
111
- <Hsp_query-frame>1</Hsp_query-frame>
112
- <Hsp_hit-frame>1</Hsp_hit-frame>
113
- <Hsp_identity>213</Hsp_identity>
114
- <Hsp_positive>213</Hsp_positive>
115
- <Hsp_gaps>0</Hsp_gaps>
116
- <Hsp_align-len>221</Hsp_align-len>
117
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAGA</Hsp_qseq>
118
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCCCCAATTCAATCTGAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAGAAGCTCTCCAATGCTCTACAGATTATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAGA</Hsp_hseq>
119
- <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
120
- </Hsp>
121
- </Hit_hsps>
122
- </Hit>
123
- <Hit>
124
- <Hit_num>3</Hit_num>
125
- <Hit_id>gi|1580165347|ref|XM_012674224.2|</Hit_id>
126
- <Hit_def>PREDICTED: Monomorium pharaonis LIRP (LOC105832901), transcript variant X1, mRNA</Hit_def>
127
- <Hit_accession>XM_012674224</Hit_accession>
128
- <Hit_len>2810</Hit_len>
129
- <Hit_hsps>
130
- <Hsp>
131
- <Hsp_num>1</Hsp_num>
132
- <Hsp_bit-score>364.91</Hsp_bit-score>
133
- <Hsp_score>197</Hsp_score>
134
- <Hsp_evalue>1.57674e-96</Hsp_evalue>
135
- <Hsp_query-from>1</Hsp_query-from>
136
- <Hsp_query-to>221</Hsp_query-to>
137
- <Hsp_hit-from>66</Hsp_hit-from>
138
- <Hsp_hit-to>286</Hsp_hit-to>
139
- <Hsp_query-frame>1</Hsp_query-frame>
140
- <Hsp_hit-frame>1</Hsp_hit-frame>
141
- <Hsp_identity>213</Hsp_identity>
142
- <Hsp_positive>213</Hsp_positive>
143
- <Hsp_gaps>0</Hsp_gaps>
144
- <Hsp_align-len>221</Hsp_align-len>
145
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAGA</Hsp_qseq>
146
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCCCCAATTCAATCTGAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAGAAGCTCTCCAATGCTCTACAGATTATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAGA</Hsp_hseq>
147
- <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
148
- </Hsp>
149
- </Hit_hsps>
150
- </Hit>
151
- <Hit>
152
- <Hit_num>4</Hit_num>
153
- <Hit_id>gi|1069706636|ref|XM_018455917.1|</Hit_id>
154
- <Hit_def>PREDICTED: Trachymyrmex zeteki LIRP (LOC108727709), mRNA</Hit_def>
155
- <Hit_accession>XM_018455917</Hit_accession>
156
- <Hit_len>1151</Hit_len>
157
- <Hit_hsps>
158
- <Hsp>
159
- <Hsp_num>1</Hsp_num>
160
- <Hsp_bit-score>329.824</Hsp_bit-score>
161
- <Hsp_score>178</Hsp_score>
162
- <Hsp_evalue>5.75176e-86</Hsp_evalue>
163
- <Hsp_query-from>1</Hsp_query-from>
164
- <Hsp_query-to>220</Hsp_query-to>
165
- <Hsp_hit-from>354</Hsp_hit-from>
166
- <Hsp_hit-to>573</Hsp_hit-to>
167
- <Hsp_query-frame>1</Hsp_query-frame>
168
- <Hsp_hit-frame>1</Hsp_hit-frame>
169
- <Hsp_identity>206</Hsp_identity>
170
- <Hsp_positive>206</Hsp_positive>
171
- <Hsp_gaps>0</Hsp_gaps>
172
- <Hsp_align-len>220</Hsp_align-len>
173
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
174
- <Hsp_hseq>ATGTCCGCGAATCGATTAAACGTGCTGGTGATCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAACGCACAGGTGGATGGCTATCCGCAATTCGGCTCGAAGCGATCCGCCGTGAGTGCGCCGCAGAAATATTGCGGCAAGAAGCTTTCCAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_hseq>
175
- <Hsp_midline>||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| | | ||||||||||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
176
- </Hsp>
177
- </Hit_hsps>
178
- </Hit>
179
- <Hit>
180
- <Hit_num>5</Hit_num>
181
- <Hit_id>gi|746853074|ref|XM_011058818.1|</Hit_id>
182
- <Hit_def>PREDICTED: Acromyrmex echinatior LIRP (LOC105147653), transcript variant X5, mRNA</Hit_def>
183
- <Hit_accession>XM_011058818</Hit_accession>
184
- <Hit_len>2481</Hit_len>
185
- <Hit_hsps>
186
- <Hsp>
187
- <Hsp_num>1</Hsp_num>
188
- <Hsp_bit-score>318.744</Hsp_bit-score>
189
- <Hsp_score>172</Hsp_score>
190
- <Hsp_evalue>1.24504e-82</Hsp_evalue>
191
- <Hsp_query-from>1</Hsp_query-from>
192
- <Hsp_query-to>220</Hsp_query-to>
193
- <Hsp_hit-from>37</Hsp_hit-from>
194
- <Hsp_hit-to>256</Hsp_hit-to>
195
- <Hsp_query-frame>1</Hsp_query-frame>
196
- <Hsp_hit-frame>1</Hsp_hit-frame>
197
- <Hsp_identity>204</Hsp_identity>
198
- <Hsp_positive>204</Hsp_positive>
199
- <Hsp_gaps>0</Hsp_gaps>
200
- <Hsp_align-len>220</Hsp_align-len>
201
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
202
- <Hsp_hseq>ATGTCCGCGAATCGATTAAACGTGCTGGTGACCCTGCTGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAACGCACAGGTAGATGGTTATCCCCAATTCAGCTCGAAGCGATCTGCCGTGAGTGCGCCGCAGAAGTATTGCGGCAAGAAGCTTTCGAATGCTCTACAAATAATCTGTGATGGCGTGTACAACTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_hseq>
203
- <Hsp_midline>||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||| | | |||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||</Hsp_midline>
204
- </Hsp>
205
- </Hit_hsps>
206
- </Hit>
207
- <Hit>
208
- <Hit_num>6</Hit_num>
209
- <Hit_id>gi|746853072|ref|XM_011058817.1|</Hit_id>
210
- <Hit_def>PREDICTED: Acromyrmex echinatior LIRP (LOC105147653), transcript variant X4, mRNA</Hit_def>
211
- <Hit_accession>XM_011058817</Hit_accession>
212
- <Hit_len>2523</Hit_len>
213
- <Hit_hsps>
214
- <Hsp>
215
- <Hsp_num>1</Hsp_num>
216
- <Hsp_bit-score>318.744</Hsp_bit-score>
217
- <Hsp_score>172</Hsp_score>
218
- <Hsp_evalue>1.24504e-82</Hsp_evalue>
219
- <Hsp_query-from>1</Hsp_query-from>
220
- <Hsp_query-to>220</Hsp_query-to>
221
- <Hsp_hit-from>79</Hsp_hit-from>
222
- <Hsp_hit-to>298</Hsp_hit-to>
223
- <Hsp_query-frame>1</Hsp_query-frame>
224
- <Hsp_hit-frame>1</Hsp_hit-frame>
225
- <Hsp_identity>204</Hsp_identity>
226
- <Hsp_positive>204</Hsp_positive>
227
- <Hsp_gaps>0</Hsp_gaps>
228
- <Hsp_align-len>220</Hsp_align-len>
229
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
230
- <Hsp_hseq>ATGTCCGCGAATCGATTAAACGTGCTGGTGACCCTGCTGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAACGCACAGGTAGATGGTTATCCCCAATTCAGCTCGAAGCGATCTGCCGTGAGTGCGCCGCAGAAGTATTGCGGCAAGAAGCTTTCGAATGCTCTACAAATAATCTGTGATGGCGTGTACAACTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_hseq>
231
- <Hsp_midline>||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||| | | |||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||</Hsp_midline>
232
- </Hsp>
233
- </Hit_hsps>
234
- </Hit>
235
- <Hit>
236
- <Hit_num>7</Hit_num>
237
- <Hit_id>gi|746853070|ref|XM_011058815.1|</Hit_id>
238
- <Hit_def>PREDICTED: Acromyrmex echinatior LIRP (LOC105147653), transcript variant X3, mRNA</Hit_def>
239
- <Hit_accession>XM_011058815</Hit_accession>
240
- <Hit_len>3284</Hit_len>
241
- <Hit_hsps>
242
- <Hsp>
243
- <Hsp_num>1</Hsp_num>
244
- <Hsp_bit-score>318.744</Hsp_bit-score>
245
- <Hsp_score>172</Hsp_score>
246
- <Hsp_evalue>1.24504e-82</Hsp_evalue>
247
- <Hsp_query-from>1</Hsp_query-from>
248
- <Hsp_query-to>220</Hsp_query-to>
249
- <Hsp_hit-from>840</Hsp_hit-from>
250
- <Hsp_hit-to>1059</Hsp_hit-to>
251
- <Hsp_query-frame>1</Hsp_query-frame>
252
- <Hsp_hit-frame>1</Hsp_hit-frame>
253
- <Hsp_identity>204</Hsp_identity>
254
- <Hsp_positive>204</Hsp_positive>
255
- <Hsp_gaps>0</Hsp_gaps>
256
- <Hsp_align-len>220</Hsp_align-len>
257
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
258
- <Hsp_hseq>ATGTCCGCGAATCGATTAAACGTGCTGGTGACCCTGCTGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAACGCACAGGTAGATGGTTATCCCCAATTCAGCTCGAAGCGATCTGCCGTGAGTGCGCCGCAGAAGTATTGCGGCAAGAAGCTTTCGAATGCTCTACAAATAATCTGTGATGGCGTGTACAACTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_hseq>
259
- <Hsp_midline>||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||| | | |||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||</Hsp_midline>
260
- </Hsp>
261
- </Hit_hsps>
262
- </Hit>
263
- <Hit>
264
- <Hit_num>8</Hit_num>
265
- <Hit_id>gi|746853068|ref|XM_011058814.1|</Hit_id>
266
- <Hit_def>PREDICTED: Acromyrmex echinatior LIRP (LOC105147653), transcript variant X2, mRNA</Hit_def>
267
- <Hit_accession>XM_011058814</Hit_accession>
268
- <Hit_len>3262</Hit_len>
269
- <Hit_hsps>
270
- <Hsp>
271
- <Hsp_num>1</Hsp_num>
272
- <Hsp_bit-score>318.744</Hsp_bit-score>
273
- <Hsp_score>172</Hsp_score>
274
- <Hsp_evalue>1.24504e-82</Hsp_evalue>
275
- <Hsp_query-from>1</Hsp_query-from>
276
- <Hsp_query-to>220</Hsp_query-to>
277
- <Hsp_hit-from>818</Hsp_hit-from>
278
- <Hsp_hit-to>1037</Hsp_hit-to>
279
- <Hsp_query-frame>1</Hsp_query-frame>
280
- <Hsp_hit-frame>1</Hsp_hit-frame>
281
- <Hsp_identity>204</Hsp_identity>
282
- <Hsp_positive>204</Hsp_positive>
283
- <Hsp_gaps>0</Hsp_gaps>
284
- <Hsp_align-len>220</Hsp_align-len>
285
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
286
- <Hsp_hseq>ATGTCCGCGAATCGATTAAACGTGCTGGTGACCCTGCTGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAACGCACAGGTAGATGGTTATCCCCAATTCAGCTCGAAGCGATCTGCCGTGAGTGCGCCGCAGAAGTATTGCGGCAAGAAGCTTTCGAATGCTCTACAAATAATCTGTGATGGCGTGTACAACTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_hseq>
287
- <Hsp_midline>||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||| | | |||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||</Hsp_midline>
288
- </Hsp>
289
- </Hit_hsps>
290
- </Hit>
291
- <Hit>
292
- <Hit_num>9</Hit_num>
293
- <Hit_id>gi|746853066|ref|XM_011058813.1|</Hit_id>
294
- <Hit_def>PREDICTED: Acromyrmex echinatior LIRP (LOC105147653), transcript variant X1, mRNA</Hit_def>
295
- <Hit_accession>XM_011058813</Hit_accession>
296
- <Hit_len>3057</Hit_len>
297
- <Hit_hsps>
298
- <Hsp>
299
- <Hsp_num>1</Hsp_num>
300
- <Hsp_bit-score>318.744</Hsp_bit-score>
301
- <Hsp_score>172</Hsp_score>
302
- <Hsp_evalue>1.24504e-82</Hsp_evalue>
303
- <Hsp_query-from>1</Hsp_query-from>
304
- <Hsp_query-to>220</Hsp_query-to>
305
- <Hsp_hit-from>613</Hsp_hit-from>
306
- <Hsp_hit-to>832</Hsp_hit-to>
307
- <Hsp_query-frame>1</Hsp_query-frame>
308
- <Hsp_hit-frame>1</Hsp_hit-frame>
309
- <Hsp_identity>204</Hsp_identity>
310
- <Hsp_positive>204</Hsp_positive>
311
- <Hsp_gaps>0</Hsp_gaps>
312
- <Hsp_align-len>220</Hsp_align-len>
313
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
314
- <Hsp_hseq>ATGTCCGCGAATCGATTAAACGTGCTGGTGACCCTGCTGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAACGCACAGGTAGATGGTTATCCCCAATTCAGCTCGAAGCGATCTGCCGTGAGTGCGCCGCAGAAGTATTGCGGCAAGAAGCTTTCGAATGCTCTACAAATAATCTGTGATGGCGTGTACAACTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_hseq>
315
- <Hsp_midline>||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||| | | |||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||</Hsp_midline>
316
- </Hsp>
317
- </Hit_hsps>
318
- </Hit>
319
- <Hit>
320
- <Hit_num>10</Hit_num>
321
- <Hit_id>gi|1070595389|ref|XM_018539340.1|</Hit_id>
322
- <Hit_def>PREDICTED: Cyphomyrmex costatus LIRP (LOC108773507), mRNA</Hit_def>
323
- <Hit_accession>XM_018539340</Hit_accession>
324
- <Hit_len>486</Hit_len>
325
- <Hit_hsps>
326
- <Hsp>
327
- <Hsp_num>1</Hsp_num>
328
- <Hsp_bit-score>307.664</Hsp_bit-score>
329
- <Hsp_score>166</Hsp_score>
330
- <Hsp_evalue>2.69503e-79</Hsp_evalue>
331
- <Hsp_query-from>1</Hsp_query-from>
332
- <Hsp_query-to>220</Hsp_query-to>
333
- <Hsp_hit-from>1</Hsp_hit-from>
334
- <Hsp_hit-to>220</Hsp_hit-to>
335
- <Hsp_query-frame>1</Hsp_query-frame>
336
- <Hsp_hit-frame>1</Hsp_hit-frame>
337
- <Hsp_identity>202</Hsp_identity>
338
- <Hsp_positive>202</Hsp_positive>
339
- <Hsp_gaps>0</Hsp_gaps>
340
- <Hsp_align-len>220</Hsp_align-len>
341
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
342
- <Hsp_hseq>ATGTCCGCAAACCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGATGGAATCGGGAAACGCACAGGTGGATGGCTATCCCCAATTCGGCTCGAAGCGATCCGCCGTAAATGCGCCACAGAAATATTGCGGCAAGAAGCTTTCCAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_hseq>
343
- <Hsp_midline>|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||| ||||||| | | |||||||||||||| | |||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
344
- </Hsp>
345
- </Hit_hsps>
346
- </Hit>
347
- <Hit>
348
- <Hit_num>11</Hit_num>
349
- <Hit_id>gi|1070193583|ref|XM_018497470.1|</Hit_id>
350
- <Hit_def>PREDICTED: Trachymyrmex septentrionalis LIRP (LOC108754847), mRNA</Hit_def>
351
- <Hit_accession>XM_018497470</Hit_accession>
352
- <Hit_len>1163</Hit_len>
353
- <Hit_hsps>
354
- <Hsp>
355
- <Hsp_num>1</Hsp_num>
356
- <Hsp_bit-score>307.664</Hsp_bit-score>
357
- <Hsp_score>166</Hsp_score>
358
- <Hsp_evalue>2.69503e-79</Hsp_evalue>
359
- <Hsp_query-from>1</Hsp_query-from>
360
- <Hsp_query-to>220</Hsp_query-to>
361
- <Hsp_hit-from>359</Hsp_hit-from>
362
- <Hsp_hit-to>578</Hsp_hit-to>
363
- <Hsp_query-frame>1</Hsp_query-frame>
364
- <Hsp_hit-frame>1</Hsp_hit-frame>
365
- <Hsp_identity>202</Hsp_identity>
366
- <Hsp_positive>202</Hsp_positive>
367
- <Hsp_gaps>0</Hsp_gaps>
368
- <Hsp_align-len>220</Hsp_align-len>
369
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
370
- <Hsp_hseq>ATGTCCGCGAATCGATTAAACGTGCTGGTGAGCCTGCTGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAACGCACAGGTAGATGGTTATCCCCAATTCAGCTCGAAGCGATCTGCCGTGAGTGCGCCGCAGAAATATTGCGGCAAGAAGCTTTCGAATGCTCTACAAATAATCTGTGATGGCGTGTACAACTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_hseq>
371
- <Hsp_midline>||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||| | | |||||||| |||||||| |||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||</Hsp_midline>
372
- </Hsp>
373
- </Hit_hsps>
374
- </Hit>
375
- <Hit>
376
- <Hit_num>12</Hit_num>
377
- <Hit_id>gi|1068419306|ref|XM_018199314.1|</Hit_id>
378
- <Hit_def>PREDICTED: Atta colombica LIRP (LOC108691535), mRNA</Hit_def>
379
- <Hit_accession>XM_018199314</Hit_accession>
380
- <Hit_len>805</Hit_len>
381
- <Hit_hsps>
382
- <Hsp>
383
- <Hsp_num>1</Hsp_num>
384
- <Hsp_bit-score>302.124</Hsp_bit-score>
385
- <Hsp_score>163</Hsp_score>
386
- <Hsp_evalue>1.25388e-77</Hsp_evalue>
387
- <Hsp_query-from>1</Hsp_query-from>
388
- <Hsp_query-to>220</Hsp_query-to>
389
- <Hsp_hit-from>1</Hsp_hit-from>
390
- <Hsp_hit-to>220</Hsp_hit-to>
391
- <Hsp_query-frame>1</Hsp_query-frame>
392
- <Hsp_hit-frame>1</Hsp_hit-frame>
393
- <Hsp_identity>201</Hsp_identity>
394
- <Hsp_positive>201</Hsp_positive>
395
- <Hsp_gaps>0</Hsp_gaps>
396
- <Hsp_align-len>220</Hsp_align-len>
397
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
398
- <Hsp_hseq>ATGTCCGCGAATCGATTAAACGTGCTGGTGACTCTGCTGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAACGCACAGGTAGATGGTTATCCCCAATTCAGCTCGAAGCGATCTGCTGTGAGTGCGCCGCAGAAATATTGCGGCAAGAAGCTTTCGAATGCTCTACAAATAATCTGTGATGGCGTGTACAACTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_hseq>
399
- <Hsp_midline>||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||| | | |||||||| || ||||| |||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||</Hsp_midline>
400
- </Hsp>
401
- </Hit_hsps>
402
- </Hit>
403
- <Hit>
404
- <Hit_num>13</Hit_num>
405
- <Hit_id>gi|801371229|ref|XM_012206899.1|</Hit_id>
406
- <Hit_def>PREDICTED: Atta cephalotes LIRP (LOC105625577), mRNA</Hit_def>
407
- <Hit_accession>XM_012206899</Hit_accession>
408
- <Hit_len>486</Hit_len>
409
- <Hit_hsps>
410
- <Hsp>
411
- <Hsp_num>1</Hsp_num>
412
- <Hsp_bit-score>302.124</Hsp_bit-score>
413
- <Hsp_score>163</Hsp_score>
414
- <Hsp_evalue>1.25388e-77</Hsp_evalue>
415
- <Hsp_query-from>1</Hsp_query-from>
416
- <Hsp_query-to>220</Hsp_query-to>
417
- <Hsp_hit-from>1</Hsp_hit-from>
418
- <Hsp_hit-to>220</Hsp_hit-to>
419
- <Hsp_query-frame>1</Hsp_query-frame>
420
- <Hsp_hit-frame>1</Hsp_hit-frame>
421
- <Hsp_identity>201</Hsp_identity>
422
- <Hsp_positive>201</Hsp_positive>
423
- <Hsp_gaps>0</Hsp_gaps>
424
- <Hsp_align-len>220</Hsp_align-len>
425
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
426
- <Hsp_hseq>ATGTCCGCGAATCGATTAAACGTGCTGGTGACTCTGCTGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAACGCACAGGTAGATGGTTATCCCCAATTCAGCTCGAAGCGATCTGCTGTGAGTGCGCCGCAGAAATATTGCGGCAAGAAGCTTTCGAATGCTCTACAAATAATCTGTGATGGCGTGTACAACTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_hseq>
427
- <Hsp_midline>||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||| | | |||||||| || ||||| |||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||</Hsp_midline>
428
- </Hsp>
429
- </Hit_hsps>
430
- </Hit>
431
- <Hit>
432
- <Hit_num>14</Hit_num>
433
- <Hit_id>gi|815796215|ref|XM_012363353.1|</Hit_id>
434
- <Hit_def>PREDICTED: Linepithema humile LIRP (LOC105670049), transcript variant X2, mRNA</Hit_def>
435
- <Hit_accession>XM_012363353</Hit_accession>
436
- <Hit_len>1354</Hit_len>
437
- <Hit_hsps>
438
- <Hsp>
439
- <Hsp_num>1</Hsp_num>
440
- <Hsp_bit-score>248.571</Hsp_bit-score>
441
- <Hsp_score>134</Hsp_score>
442
- <Hsp_evalue>1.65678e-61</Hsp_evalue>
443
- <Hsp_query-from>1</Hsp_query-from>
444
- <Hsp_query-to>221</Hsp_query-to>
445
- <Hsp_hit-from>235</Hsp_hit-from>
446
- <Hsp_hit-to>455</Hsp_hit-to>
447
- <Hsp_query-frame>1</Hsp_query-frame>
448
- <Hsp_hit-frame>1</Hsp_hit-frame>
449
- <Hsp_identity>192</Hsp_identity>
450
- <Hsp_positive>192</Hsp_positive>
451
- <Hsp_gaps>0</Hsp_gaps>
452
- <Hsp_align-len>221</Hsp_align-len>
453
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAGA</Hsp_qseq>
454
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTGGTCGTGACCCTGGTGCTCGCCGTCGCGTTTCTCGCGGCGGAATCGGGGAACGCACAGGCGGATGGCTATCCGCAATTCGGCCCGAAACGACCCTCCATGAGCGCGCCGCAAAAATATTGCGGCAAGAAGCTATCCAATGCTCTACAGATAATCTGTGATGGCGTGTATAATTCCATGTTTAAAAAGAGTGTTCAAGA</Hsp_hseq>
455
- <Hsp_midline>|||||||||||||||||||||||| | ||||||||| |||||||||||||| |||| | | ||||||| || || ||||||| ||||||||||| |||||| ||| || ||| || || ||||| ||||||| || ||||||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||</Hsp_midline>
456
- </Hsp>
457
- </Hit_hsps>
458
- </Hit>
459
- <Hit>
460
- <Hit_num>15</Hit_num>
461
- <Hit_id>gi|815796221|ref|XM_012363356.1|</Hit_id>
462
- <Hit_def>PREDICTED: Linepithema humile LIRP (LOC105670049), transcript variant X5, mRNA</Hit_def>
463
- <Hit_accession>XM_012363356</Hit_accession>
464
- <Hit_len>1248</Hit_len>
465
- <Hit_hsps>
466
- <Hsp>
467
- <Hsp_num>1</Hsp_num>
468
- <Hsp_bit-score>246.725</Hsp_bit-score>
469
- <Hsp_score>133</Hsp_score>
470
- <Hsp_evalue>5.95886e-61</Hsp_evalue>
471
- <Hsp_query-from>1</Hsp_query-from>
472
- <Hsp_query-to>220</Hsp_query-to>
473
- <Hsp_hit-from>69</Hsp_hit-from>
474
- <Hsp_hit-to>288</Hsp_hit-to>
475
- <Hsp_query-frame>1</Hsp_query-frame>
476
- <Hsp_hit-frame>1</Hsp_hit-frame>
477
- <Hsp_identity>191</Hsp_identity>
478
- <Hsp_positive>191</Hsp_positive>
479
- <Hsp_gaps>0</Hsp_gaps>
480
- <Hsp_align-len>220</Hsp_align-len>
481
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
482
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTGGTCGTGACCCTGGTGCTCGCCGTCGCGTTTCTCGCGGCGGAATCGGGGAACGCACAGGCGGATGGCTATCCGCAATTCGGCCCGAAACGACCCTCCATGAGCGCGCCGCAAAAATATTGCGGCAAGAAGCTATCCAATGCTCTACAGATAATCTGTGATGGCGTGTATAATTCCATGTTTAAAAAGAGTGTTCAAG</Hsp_hseq>
483
- <Hsp_midline>|||||||||||||||||||||||| | ||||||||| |||||||||||||| |||| | | ||||||| || || ||||||| ||||||||||| |||||| ||| || ||| || || ||||| ||||||| || ||||||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||</Hsp_midline>
484
- </Hsp>
485
- </Hit_hsps>
486
- </Hit>
487
- <Hit>
488
- <Hit_num>16</Hit_num>
489
- <Hit_id>gi|815796219|ref|XM_012363355.1|</Hit_id>
490
- <Hit_def>PREDICTED: Linepithema humile LIRP (LOC105670049), transcript variant X4, mRNA</Hit_def>
491
- <Hit_accession>XM_012363355</Hit_accession>
492
- <Hit_len>1514</Hit_len>
493
- <Hit_hsps>
494
- <Hsp>
495
- <Hsp_num>1</Hsp_num>
496
- <Hsp_bit-score>246.725</Hsp_bit-score>
497
- <Hsp_score>133</Hsp_score>
498
- <Hsp_evalue>5.95886e-61</Hsp_evalue>
499
- <Hsp_query-from>1</Hsp_query-from>
500
- <Hsp_query-to>220</Hsp_query-to>
501
- <Hsp_hit-from>335</Hsp_hit-from>
502
- <Hsp_hit-to>554</Hsp_hit-to>
503
- <Hsp_query-frame>1</Hsp_query-frame>
504
- <Hsp_hit-frame>1</Hsp_hit-frame>
505
- <Hsp_identity>191</Hsp_identity>
506
- <Hsp_positive>191</Hsp_positive>
507
- <Hsp_gaps>0</Hsp_gaps>
508
- <Hsp_align-len>220</Hsp_align-len>
509
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
510
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTGGTCGTGACCCTGGTGCTCGCCGTCGCGTTTCTCGCGGCGGAATCGGGGAACGCACAGGCGGATGGCTATCCGCAATTCGGCCCGAAACGACCCTCCATGAGCGCGCCGCAAAAATATTGCGGCAAGAAGCTATCCAATGCTCTACAGATAATCTGTGATGGCGTGTATAATTCCATGTTTAAAAAGAGTGTTCAAG</Hsp_hseq>
511
- <Hsp_midline>|||||||||||||||||||||||| | ||||||||| |||||||||||||| |||| | | ||||||| || || ||||||| ||||||||||| |||||| ||| || ||| || || ||||| ||||||| || ||||||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||</Hsp_midline>
512
- </Hsp>
513
- </Hit_hsps>
514
- </Hit>
515
- <Hit>
516
- <Hit_num>17</Hit_num>
517
- <Hit_id>gi|815796217|ref|XM_012363354.1|</Hit_id>
518
- <Hit_def>PREDICTED: Linepithema humile LIRP (LOC105670049), transcript variant X3, mRNA</Hit_def>
519
- <Hit_accession>XM_012363354</Hit_accession>
520
- <Hit_len>2238</Hit_len>
521
- <Hit_hsps>
522
- <Hsp>
523
- <Hsp_num>1</Hsp_num>
524
- <Hsp_bit-score>246.725</Hsp_bit-score>
525
- <Hsp_score>133</Hsp_score>
526
- <Hsp_evalue>5.95886e-61</Hsp_evalue>
527
- <Hsp_query-from>1</Hsp_query-from>
528
- <Hsp_query-to>220</Hsp_query-to>
529
- <Hsp_hit-from>1059</Hsp_hit-from>
530
- <Hsp_hit-to>1278</Hsp_hit-to>
531
- <Hsp_query-frame>1</Hsp_query-frame>
532
- <Hsp_hit-frame>1</Hsp_hit-frame>
533
- <Hsp_identity>191</Hsp_identity>
534
- <Hsp_positive>191</Hsp_positive>
535
- <Hsp_gaps>0</Hsp_gaps>
536
- <Hsp_align-len>220</Hsp_align-len>
537
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
538
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTGGTCGTGACCCTGGTGCTCGCCGTCGCGTTTCTCGCGGCGGAATCGGGGAACGCACAGGCGGATGGCTATCCGCAATTCGGCCCGAAACGACCCTCCATGAGCGCGCCGCAAAAATATTGCGGCAAGAAGCTATCCAATGCTCTACAGATAATCTGTGATGGCGTGTATAATTCCATGTTTAAAAAGAGTGTTCAAG</Hsp_hseq>
539
- <Hsp_midline>|||||||||||||||||||||||| | ||||||||| |||||||||||||| |||| | | ||||||| || || ||||||| ||||||||||| |||||| ||| || ||| || || ||||| ||||||| || ||||||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||</Hsp_midline>
540
- </Hsp>
541
- </Hit_hsps>
542
- </Hit>
543
- <Hit>
544
- <Hit_num>18</Hit_num>
545
- <Hit_id>gi|815796213|ref|XM_012363352.1|</Hit_id>
546
- <Hit_def>PREDICTED: Linepithema humile LIRP (LOC105670049), transcript variant X1, mRNA</Hit_def>
547
- <Hit_accession>XM_012363352</Hit_accession>
548
- <Hit_len>1406</Hit_len>
549
- <Hit_hsps>
550
- <Hsp>
551
- <Hsp_num>1</Hsp_num>
552
- <Hsp_bit-score>246.725</Hsp_bit-score>
553
- <Hsp_score>133</Hsp_score>
554
- <Hsp_evalue>5.95886e-61</Hsp_evalue>
555
- <Hsp_query-from>1</Hsp_query-from>
556
- <Hsp_query-to>220</Hsp_query-to>
557
- <Hsp_hit-from>227</Hsp_hit-from>
558
- <Hsp_hit-to>446</Hsp_hit-to>
559
- <Hsp_query-frame>1</Hsp_query-frame>
560
- <Hsp_hit-frame>1</Hsp_hit-frame>
561
- <Hsp_identity>191</Hsp_identity>
562
- <Hsp_positive>191</Hsp_positive>
563
- <Hsp_gaps>0</Hsp_gaps>
564
- <Hsp_align-len>220</Hsp_align-len>
565
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
566
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTGGTCGTGACCCTGGTGCTCGCCGTCGCGTTTCTCGCGGCGGAATCGGGGAACGCACAGGCGGATGGCTATCCGCAATTCGGCCCGAAACGACCCTCCATGAGCGCGCCGCAAAAATATTGCGGCAAGAAGCTATCCAATGCTCTACAGATAATCTGTGATGGCGTGTATAATTCCATGTTTAAAAAGAGTGTTCAAG</Hsp_hseq>
567
- <Hsp_midline>|||||||||||||||||||||||| | ||||||||| |||||||||||||| |||| | | ||||||| || || ||||||| ||||||||||| |||||| ||| || ||| || || ||||| ||||||| || ||||||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||</Hsp_midline>
568
- </Hsp>
569
- </Hit_hsps>
570
- </Hit>
571
- <Hit>
572
- <Hit_num>19</Hit_num>
573
- <Hit_id>gi|795032174|ref|XM_012008454.1|</Hit_id>
574
- <Hit_def>PREDICTED: Vollenhovia emeryi LIRP-like (LOC105559845), transcript variant X2, mRNA</Hit_def>
575
- <Hit_accession>XM_012008454</Hit_accession>
576
- <Hit_len>3017</Hit_len>
577
- <Hit_hsps>
578
- <Hsp>
579
- <Hsp_num>1</Hsp_num>
580
- <Hsp_bit-score>235.645</Hsp_bit-score>
581
- <Hsp_score>127</Hsp_score>
582
- <Hsp_evalue>1.28987e-57</Hsp_evalue>
583
- <Hsp_query-from>1</Hsp_query-from>
584
- <Hsp_query-to>211</Hsp_query-to>
585
- <Hsp_hit-from>153</Hsp_hit-from>
586
- <Hsp_hit-to>363</Hsp_hit-to>
587
- <Hsp_query-frame>1</Hsp_query-frame>
588
- <Hsp_hit-frame>1</Hsp_hit-frame>
589
- <Hsp_identity>184</Hsp_identity>
590
- <Hsp_positive>184</Hsp_positive>
591
- <Hsp_gaps>2</Hsp_gaps>
592
- <Hsp_align-len>212</Hsp_align-len>
593
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTA-TCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGA</Hsp_qseq>
594
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTCCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCGGGAAACGCACAGATGAACGGCAACTCTC-AATCCAGATCGGCGGGATCCGCCAGAAGCCCGCCGCAGAGATATTGCGGCAAGAAGCTCTCCAATGCTCTACAGTTAATCTGTGATGGCGTGTACAATTCGATGTTTAAGAAGA</Hsp_hseq>
595
- <Hsp_midline>||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| || | ||| | |||| ||| || | | |||||||| ||| ||||||||| ||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||||| |||||||||||||</Hsp_midline>
596
- </Hsp>
597
- </Hit_hsps>
598
- </Hit>
599
- <Hit>
600
- <Hit_num>20</Hit_num>
601
- <Hit_id>gi|795032171|ref|XM_012008453.1|</Hit_id>
602
- <Hit_def>PREDICTED: Vollenhovia emeryi LIRP-like (LOC105559845), transcript variant X1, mRNA</Hit_def>
603
- <Hit_accession>XM_012008453</Hit_accession>
604
- <Hit_len>2942</Hit_len>
605
- <Hit_hsps>
606
- <Hsp>
607
- <Hsp_num>1</Hsp_num>
608
- <Hsp_bit-score>235.645</Hsp_bit-score>
609
- <Hsp_score>127</Hsp_score>
610
- <Hsp_evalue>1.28987e-57</Hsp_evalue>
611
- <Hsp_query-from>1</Hsp_query-from>
612
- <Hsp_query-to>211</Hsp_query-to>
613
- <Hsp_hit-from>78</Hsp_hit-from>
614
- <Hsp_hit-to>288</Hsp_hit-to>
615
- <Hsp_query-frame>1</Hsp_query-frame>
616
- <Hsp_hit-frame>1</Hsp_hit-frame>
617
- <Hsp_identity>184</Hsp_identity>
618
- <Hsp_positive>184</Hsp_positive>
619
- <Hsp_gaps>2</Hsp_gaps>
620
- <Hsp_align-len>212</Hsp_align-len>
621
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTA-TCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGA</Hsp_qseq>
622
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTCCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCGGGAAACGCACAGATGAACGGCAACTCTC-AATCCAGATCGGCGGGATCCGCCAGAAGCCCGCCGCAGAGATATTGCGGCAAGAAGCTCTCCAATGCTCTACAGTTAATCTGTGATGGCGTGTACAATTCGATGTTTAAGAAGA</Hsp_hseq>
623
- <Hsp_midline>||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| || | ||| | |||| ||| || | | |||||||| ||| ||||||||| ||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||||| |||||||||||||</Hsp_midline>
624
- </Hsp>
625
- </Hit_hsps>
626
- </Hit>
627
- <Hit>
628
- <Hit_num>21</Hit_num>
629
- <Hit_id>gi|780720041|ref|XM_011708386.1|</Hit_id>
630
- <Hit_def>PREDICTED: Wasmannia auropunctata LIRP (LOC105461874), transcript variant X4, mRNA</Hit_def>
631
- <Hit_accession>XM_011708386</Hit_accession>
632
- <Hit_len>747</Hit_len>
633
- <Hit_hsps>
634
- <Hsp>
635
- <Hsp_num>1</Hsp_num>
636
- <Hsp_bit-score>209.792</Hsp_bit-score>
637
- <Hsp_score>113</Hsp_score>
638
- <Hsp_evalue>7.81811e-50</Hsp_evalue>
639
- <Hsp_query-from>1</Hsp_query-from>
640
- <Hsp_query-to>220</Hsp_query-to>
641
- <Hsp_hit-from>56</Hsp_hit-from>
642
- <Hsp_hit-to>284</Hsp_hit-to>
643
- <Hsp_query-frame>1</Hsp_query-frame>
644
- <Hsp_hit-frame>1</Hsp_hit-frame>
645
- <Hsp_identity>192</Hsp_identity>
646
- <Hsp_positive>192</Hsp_positive>
647
- <Hsp_gaps>9</Hsp_gaps>
648
- <Hsp_align-len>229</Hsp_align-len>
649
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTC-AACCCA-A-AG---CGATCCGCCGTGAGCT--CGCC-GCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
650
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTGCTGATGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAAGAAACGCACAGGTGGATGGCTATTCCCAATACGAATCAATAGAGAATCGAGCCGCCGCGAGAAAACCCCAGCACAAGTATTGCGGCATGAGGCTCTCCAGTGCTCTACAGATAGTCTGTGCGGGCAATTACAATGCCATGTTTAAGAAGAATGGTCAAG</Hsp_hseq>
651
- <Hsp_midline>||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| | || | | | || ||| |||||| ||| | || ||| ||||||||||||| | ||| || | ||||||||||||| |||||| ||| |||||| ||||||||||||||| ||||||||</Hsp_midline>
652
- </Hsp>
653
- </Hit_hsps>
654
- </Hit>
655
- <Hit>
656
- <Hit_num>22</Hit_num>
657
- <Hit_id>gi|780720036|ref|XM_011708385.1|</Hit_id>
658
- <Hit_def>PREDICTED: Wasmannia auropunctata LIRP (LOC105461874), transcript variant X3, mRNA</Hit_def>
659
- <Hit_accession>XM_011708385</Hit_accession>
660
- <Hit_len>1679</Hit_len>
661
- <Hit_hsps>
662
- <Hsp>
663
- <Hsp_num>1</Hsp_num>
664
- <Hsp_bit-score>209.792</Hsp_bit-score>
665
- <Hsp_score>113</Hsp_score>
666
- <Hsp_evalue>7.81811e-50</Hsp_evalue>
667
- <Hsp_query-from>1</Hsp_query-from>
668
- <Hsp_query-to>220</Hsp_query-to>
669
- <Hsp_hit-from>988</Hsp_hit-from>
670
- <Hsp_hit-to>1216</Hsp_hit-to>
671
- <Hsp_query-frame>1</Hsp_query-frame>
672
- <Hsp_hit-frame>1</Hsp_hit-frame>
673
- <Hsp_identity>192</Hsp_identity>
674
- <Hsp_positive>192</Hsp_positive>
675
- <Hsp_gaps>9</Hsp_gaps>
676
- <Hsp_align-len>229</Hsp_align-len>
677
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTC-AACCCA-A-AG---CGATCCGCCGTGAGCT--CGCC-GCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
678
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTGCTGATGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAAGAAACGCACAGGTGGATGGCTATTCCCAATACGAATCAATAGAGAATCGAGCCGCCGCGAGAAAACCCCAGCACAAGTATTGCGGCATGAGGCTCTCCAGTGCTCTACAGATAGTCTGTGCGGGCAATTACAATGCCATGTTTAAGAAGAATGGTCAAG</Hsp_hseq>
679
- <Hsp_midline>||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| | || | | | || ||| |||||| ||| | || ||| ||||||||||||| | ||| || | ||||||||||||| |||||| ||| |||||| ||||||||||||||| ||||||||</Hsp_midline>
680
- </Hsp>
681
- </Hit_hsps>
682
- </Hit>
683
- <Hit>
684
- <Hit_num>23</Hit_num>
685
- <Hit_id>gi|780720032|ref|XM_011708383.1|</Hit_id>
686
- <Hit_def>PREDICTED: Wasmannia auropunctata LIRP (LOC105461874), transcript variant X2, mRNA</Hit_def>
687
- <Hit_accession>XM_011708383</Hit_accession>
688
- <Hit_len>837</Hit_len>
689
- <Hit_hsps>
690
- <Hsp>
691
- <Hsp_num>1</Hsp_num>
692
- <Hsp_bit-score>209.792</Hsp_bit-score>
693
- <Hsp_score>113</Hsp_score>
694
- <Hsp_evalue>7.81811e-50</Hsp_evalue>
695
- <Hsp_query-from>1</Hsp_query-from>
696
- <Hsp_query-to>220</Hsp_query-to>
697
- <Hsp_hit-from>209</Hsp_hit-from>
698
- <Hsp_hit-to>437</Hsp_hit-to>
699
- <Hsp_query-frame>1</Hsp_query-frame>
700
- <Hsp_hit-frame>1</Hsp_hit-frame>
701
- <Hsp_identity>192</Hsp_identity>
702
- <Hsp_positive>192</Hsp_positive>
703
- <Hsp_gaps>9</Hsp_gaps>
704
- <Hsp_align-len>229</Hsp_align-len>
705
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTC-AACCCA-A-AG---CGATCCGCCGTGAGCT--CGCC-GCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
706
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTGCTGATGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAAGAAACGCACAGGTGGATGGCTATTCCCAATACGAATCAATAGAGAATCGAGCCGCCGCGAGAAAACCCCAGCACAAGTATTGCGGCATGAGGCTCTCCAGTGCTCTACAGATAGTCTGTGCGGGCAATTACAATGCCATGTTTAAGAAGAATGGTCAAG</Hsp_hseq>
707
- <Hsp_midline>||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| | || | | | || ||| |||||| ||| | || ||| ||||||||||||| | ||| || | ||||||||||||| |||||| ||| |||||| ||||||||||||||| ||||||||</Hsp_midline>
708
- </Hsp>
709
- </Hit_hsps>
710
- </Hit>
711
- <Hit>
712
- <Hit_num>24</Hit_num>
713
- <Hit_id>gi|780720028|ref|XM_011708382.1|</Hit_id>
714
- <Hit_def>PREDICTED: Wasmannia auropunctata LIRP (LOC105461874), transcript variant X1, mRNA</Hit_def>
715
- <Hit_accession>XM_011708382</Hit_accession>
716
- <Hit_len>900</Hit_len>
717
- <Hit_hsps>
718
- <Hsp>
719
- <Hsp_num>1</Hsp_num>
720
- <Hsp_bit-score>209.792</Hsp_bit-score>
721
- <Hsp_score>113</Hsp_score>
722
- <Hsp_evalue>7.81811e-50</Hsp_evalue>
723
- <Hsp_query-from>1</Hsp_query-from>
724
- <Hsp_query-to>220</Hsp_query-to>
725
- <Hsp_hit-from>209</Hsp_hit-from>
726
- <Hsp_hit-to>437</Hsp_hit-to>
727
- <Hsp_query-frame>1</Hsp_query-frame>
728
- <Hsp_hit-frame>1</Hsp_hit-frame>
729
- <Hsp_identity>192</Hsp_identity>
730
- <Hsp_positive>192</Hsp_positive>
731
- <Hsp_gaps>9</Hsp_gaps>
732
- <Hsp_align-len>229</Hsp_align-len>
733
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTC-AACCCA-A-AG---CGATCCGCCGTGAGCT--CGCC-GCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
734
- <Hsp_hseq>ATGTCCGCGAATCGATTGAACGTGCTGATGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAAGAAACGCACAGGTGGATGGCTATTCCCAATACGAATCAATAGAGAATCGAGCCGCCGCGAGAAAACCCCAGCACAAGTATTGCGGCATGAGGCTCTCCAGTGCTCTACAGATAGTCTGTGCGGGCAATTACAATGCCATGTTTAAGAAGAATGGTCAAG</Hsp_hseq>
735
- <Hsp_midline>||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| | || | | | || ||| |||||| ||| | || ||| ||||||||||||| | ||| || | ||||||||||||| |||||| ||| |||||| ||||||||||||||| ||||||||</Hsp_midline>
736
- </Hsp>
737
- </Hit_hsps>
738
- </Hit>
739
- <Hit>
740
- <Hit_num>25</Hit_num>
741
- <Hit_id>gi|1418076167|ref|XM_025411542.1|</Hit_id>
742
- <Hit_def>PREDICTED: Camponotus floridanus LIRP (LOC105257206), transcript variant X2, mRNA</Hit_def>
743
- <Hit_accession>XM_025411542</Hit_accession>
744
- <Hit_len>821</Hit_len>
745
- <Hit_hsps>
746
- <Hsp>
747
- <Hsp_num>1</Hsp_num>
748
- <Hsp_bit-score>172.859</Hsp_bit-score>
749
- <Hsp_score>93</Hsp_score>
750
- <Hsp_evalue>1.02575e-38</Hsp_evalue>
751
- <Hsp_query-from>1</Hsp_query-from>
752
- <Hsp_query-to>213</Hsp_query-to>
753
- <Hsp_hit-from>25</Hsp_hit-from>
754
- <Hsp_hit-to>231</Hsp_hit-to>
755
- <Hsp_query-frame>1</Hsp_query-frame>
756
- <Hsp_hit-frame>1</Hsp_hit-frame>
757
- <Hsp_identity>174</Hsp_identity>
758
- <Hsp_positive>174</Hsp_positive>
759
- <Hsp_gaps>6</Hsp_gaps>
760
- <Hsp_align-len>213</Hsp_align-len>
761
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGT</Hsp_qseq>
762
- <Hsp_hseq>ATGTCCACGAACCATTTGAACGTGTTTGTGAGCTTGATGATCGCCATCGCGTTTCTTGTGTCGGAATCAAGAAACGCACAAGCGAACGGCTACCCCCAATTTAACC---AGAAACCTG-CG-G-GCGTGCCCCAGAAATATTGTGGCAAGAAGCTTTCTAATGCTCTACAGATAGTCTGTGATGGCGTGTACAATTCCATGTTTAAAAAGAGT</Hsp_hseq>
763
- <Hsp_midline>|||||| |||| | ||||||||| | |||| | ||||| ||||| ||||| |||||||| |||||||| |||| ||||| | | | ||||| | |||||| |||| || | | | || | || ||| ||||| ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||</Hsp_midline>
764
- </Hsp>
765
- </Hit_hsps>
766
- </Hit>
767
- <Hit>
768
- <Hit_num>26</Hit_num>
769
- <Hit_id>gi|1418076166|ref|XM_011267669.3|</Hit_id>
770
- <Hit_def>PREDICTED: Camponotus floridanus LIRP (LOC105257206), transcript variant X1, mRNA</Hit_def>
771
- <Hit_accession>XM_011267669</Hit_accession>
772
- <Hit_len>1722</Hit_len>
773
- <Hit_hsps>
774
- <Hsp>
775
- <Hsp_num>1</Hsp_num>
776
- <Hsp_bit-score>172.859</Hsp_bit-score>
777
- <Hsp_score>93</Hsp_score>
778
- <Hsp_evalue>1.02575e-38</Hsp_evalue>
779
- <Hsp_query-from>1</Hsp_query-from>
780
- <Hsp_query-to>213</Hsp_query-to>
781
- <Hsp_hit-from>926</Hsp_hit-from>
782
- <Hsp_hit-to>1132</Hsp_hit-to>
783
- <Hsp_query-frame>1</Hsp_query-frame>
784
- <Hsp_hit-frame>1</Hsp_hit-frame>
785
- <Hsp_identity>174</Hsp_identity>
786
- <Hsp_positive>174</Hsp_positive>
787
- <Hsp_gaps>6</Hsp_gaps>
788
- <Hsp_align-len>213</Hsp_align-len>
789
- <Hsp_qseq>ATGTCCGCGAATCGATTGAACGTGCTGGTGACCCTGATGCTCGCCGTCGCGCTTCTTGTGACGGAATCAGGAAATGCACAGGTGGATGGCTATCTCCAATTCAACCCAAAGCGATCCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGT</Hsp_qseq>
790
- <Hsp_hseq>ATGTCCACGAACCATTTGAACGTGTTTGTGAGCTTGATGATCGCCATCGCGTTTCTTGTGTCGGAATCAAGAAACGCACAAGCGAACGGCTACCCCCAATTTAACC---AGAAACCTG-CG-G-GCGTGCCCCAGAAATATTGTGGCAAGAAGCTTTCTAATGCTCTACAGATAGTCTGTGATGGCGTGTACAATTCCATGTTTAAAAAGAGT</Hsp_hseq>
791
- <Hsp_midline>|||||| |||| | ||||||||| | |||| | ||||| ||||| ||||| |||||||| |||||||| |||| ||||| | | | ||||| | |||||| |||| || | | | || | || ||| ||||| ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||</Hsp_midline>
792
- </Hsp>
793
- </Hit_hsps>
794
- </Hit>
795
- <Hit>
796
- <Hit_num>27</Hit_num>
797
- <Hit_id>gi|1398058614|ref|XM_011647420.2|</Hit_id>
798
- <Hit_def>PREDICTED: Pogonomyrmex barbatus LIRP-like (LOC105432563), transcript variant X2, mRNA</Hit_def>
799
- <Hit_accession>XM_011647420</Hit_accession>
800
- <Hit_len>5348</Hit_len>
801
- <Hit_hsps>
802
- <Hsp>
803
- <Hsp_num>1</Hsp_num>
804
- <Hsp_bit-score>150.699</Hsp_bit-score>
805
- <Hsp_score>81</Hsp_score>
806
- <Hsp_evalue>4.80622e-32</Hsp_evalue>
807
- <Hsp_query-from>116</Hsp_query-from>
808
- <Hsp_query-to>220</Hsp_query-to>
809
- <Hsp_hit-from>1096</Hsp_hit-from>
810
- <Hsp_hit-to>1200</Hsp_hit-to>
811
- <Hsp_query-frame>1</Hsp_query-frame>
812
- <Hsp_hit-frame>1</Hsp_hit-frame>
813
- <Hsp_identity>97</Hsp_identity>
814
- <Hsp_positive>97</Hsp_positive>
815
- <Hsp_gaps>0</Hsp_gaps>
816
- <Hsp_align-len>105</Hsp_align-len>
817
- <Hsp_qseq>CCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
818
- <Hsp_hseq>CCCCCGTGAATGCGCCGCAGAAATATTGCGGCAAAAAGCTGTCCAATGCTCTACAGATAATCTGTGATGGCGTGTATAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_hseq>
819
- <Hsp_midline>|| |||||| |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||</Hsp_midline>
820
- </Hsp>
821
- </Hit_hsps>
822
- </Hit>
823
- <Hit>
824
- <Hit_num>28</Hit_num>
825
- <Hit_id>gi|769867415|ref|XM_011647419.1|</Hit_id>
826
- <Hit_def>PREDICTED: Pogonomyrmex barbatus LIRP-like (LOC105432563), transcript variant X1, mRNA</Hit_def>
827
- <Hit_accession>XM_011647419</Hit_accession>
828
- <Hit_len>4478</Hit_len>
829
- <Hit_hsps>
830
- <Hsp>
831
- <Hsp_num>1</Hsp_num>
832
- <Hsp_bit-score>150.699</Hsp_bit-score>
833
- <Hsp_score>81</Hsp_score>
834
- <Hsp_evalue>4.80622e-32</Hsp_evalue>
835
- <Hsp_query-from>116</Hsp_query-from>
836
- <Hsp_query-to>220</Hsp_query-to>
837
- <Hsp_hit-from>226</Hsp_hit-from>
838
- <Hsp_hit-to>330</Hsp_hit-to>
839
- <Hsp_query-frame>1</Hsp_query-frame>
840
- <Hsp_hit-frame>1</Hsp_hit-frame>
841
- <Hsp_identity>97</Hsp_identity>
842
- <Hsp_positive>97</Hsp_positive>
843
- <Hsp_gaps>0</Hsp_gaps>
844
- <Hsp_align-len>105</Hsp_align-len>
845
- <Hsp_qseq>CCGCCGTGAGCTCGCCGCAGAAGTATTGCGGCAAAAAGCTTTCTAATGCTCTACAGATAATCTGTGATGGCGTGTACAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_qseq>
846
- <Hsp_hseq>CCCCCGTGAATGCGCCGCAGAAATATTGCGGCAAAAAGCTGTCCAATGCTCTACAGATAATCTGTGATGGCGTGTATAATTCCATGTTTAAGAAGAGTGGTCAAG</Hsp_hseq>
847
- <Hsp_midline>|| |||||| |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||</Hsp_midline>
848
- </Hsp>
849
- </Hit_hsps>
850
- </Hit>
851
- </Iteration_hits>
852
- <Iteration_stat>
853
- <Statistics>
854
- <Statistics_db-num>52085306</Statistics_db-num>
855
- <Statistics_db-len>214274604493</Statistics_db-len>
856
- <Statistics_hsp-len>34</Statistics_hsp-len>
857
- <Statistics_eff-space>111351940942636</Statistics_eff-space>
858
- <Statistics_kappa>0.46</Statistics_kappa>
859
- <Statistics_lambda>1.28</Statistics_lambda>
860
- <Statistics_entropy>0.85</Statistics_entropy>
861
- </Statistics>
862
- </Iteration_stat>
863
- </Iteration>
864
- </BlastOutput_iterations>
865
- </BlastOutput>
866
-