sequenceserver 2.0.0.rc7 → 2.0.0.rc8

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Files changed (530) hide show
  1. checksums.yaml +4 -4
  2. data/bin/chromedriver +0 -0
  3. data/bin/geckodriver +0 -0
  4. data/bin/sequenceserver +31 -4
  5. data/lib/sequenceserver.rb +6 -1
  6. data/lib/sequenceserver/database.rb +7 -42
  7. data/lib/sequenceserver/exceptions.rb +14 -0
  8. data/lib/sequenceserver/makeblastdb.rb +121 -41
  9. data/lib/sequenceserver/routes.rb +1 -1
  10. data/lib/sequenceserver/version.rb +1 -1
  11. data/public/css/sequenceserver.css +8 -2
  12. data/public/css/sequenceserver.min.css +1 -1
  13. data/public/js/jquery_world.js +1 -1
  14. data/public/js/report.js +1 -2
  15. data/public/js/search.js +40 -18
  16. data/public/js/sidebar.js +50 -26
  17. data/public/sequenceserver-report.min.js +17 -17
  18. data/public/sequenceserver-search.min.js +2 -2
  19. data/views/layout.erb +1 -1
  20. data/views/report.erb +1 -1
  21. data/views/search.erb +1 -1
  22. metadata +4 -510
  23. data/.bootstrap/config.json +0 -433
  24. data/.codeclimate.yml +0 -31
  25. data/.csslintrc +0 -2
  26. data/.dockerignore +0 -1
  27. data/.eslintignore +0 -1
  28. data/.eslintrc.json +0 -36
  29. data/.gitignore +0 -56
  30. data/.mailmap +0 -5
  31. data/.rspec +0 -3
  32. data/.rubocop.yml +0 -61
  33. data/.travis.yml +0 -74
  34. data/AppImage/recipe.yml +0 -15
  35. data/AppImage/sequenceserver.desktop +0 -8
  36. data/AppImage/sequenceserver.png +0 -0
  37. data/AppImage/sequenceserver.sh +0 -16
  38. data/Dockerfile +0 -25
  39. data/LICENSE.txt +0 -661
  40. data/LICENSE/Apache.txt +0 -176
  41. data/LICENSE/d3.txt +0 -26
  42. data/README.md +0 -161
  43. data/package.json +0 -48
  44. data/public/vendor/.dependencies.json +0 -18
  45. data/public/vendor/.loaderversions +0 -1
  46. data/public/vendor/github/components/jquery@2.1.4/.gitignore +0 -1
  47. data/public/vendor/github/components/jquery@2.1.4/.jspm-hash +0 -1
  48. data/public/vendor/github/components/jquery@2.1.4/.jspm.json +0 -37
  49. data/public/vendor/github/components/jqueryui@1.11.4/.gitignore +0 -4
  50. data/public/vendor/github/components/jqueryui@1.11.4/.jspm-hash +0 -1
  51. data/public/vendor/github/components/jqueryui@1.11.4/.jspm.json +0 -136
  52. data/public/vendor/github/components/jqueryui@1.11.4/ui/.jshintrc +0 -24
  53. data/public/vendor/github/jspm/nodelibs-buffer@0.1.0/.jspm-hash +0 -1
  54. data/public/vendor/github/jspm/nodelibs-buffer@0.1.0/.jspm.json +0 -10
  55. data/public/vendor/github/jspm/nodelibs-events@0.1.1/.jspm-hash +0 -1
  56. data/public/vendor/github/jspm/nodelibs-events@0.1.1/.jspm.json +0 -10
  57. data/public/vendor/github/jspm/nodelibs-fs@0.1.2/.jspm-hash +0 -1
  58. data/public/vendor/github/jspm/nodelibs-module@0.1.0/.jspm-hash +0 -1
  59. data/public/vendor/github/jspm/nodelibs-module@0.1.0/.jspm.json +0 -3
  60. data/public/vendor/github/jspm/nodelibs-path@0.1.0/.jspm-hash +0 -1
  61. data/public/vendor/github/jspm/nodelibs-path@0.1.0/.jspm.json +0 -10
  62. data/public/vendor/github/jspm/nodelibs-process@0.1.1/.jspm-hash +0 -1
  63. data/public/vendor/github/jspm/nodelibs-stream@0.1.0/.jspm-hash +0 -1
  64. data/public/vendor/github/jspm/nodelibs-stream@0.1.0/.jspm.json +0 -10
  65. data/public/vendor/github/jspm/nodelibs-util@0.1.0/.jspm-hash +0 -1
  66. data/public/vendor/github/jspm/nodelibs-util@0.1.0/.jspm.json +0 -10
  67. data/public/vendor/github/mbostock/d3@3.5.6/.jspm-hash +0 -1
  68. data/public/vendor/github/mbostock/d3@3.5.6/.jspm.json +0 -76
  69. data/public/vendor/github/nicgirault/circosJs@1.7.0/.gitignore +0 -10
  70. data/public/vendor/github/nicgirault/circosJs@1.7.0/.jspm-hash +0 -1
  71. data/public/vendor/github/systemjs/plugin-css@0.1.15/.gitignore +0 -1
  72. data/public/vendor/github/systemjs/plugin-css@0.1.15/.jspm-hash +0 -1
  73. data/public/vendor/github/systemjs/plugin-css@0.1.15/.jspm.json +0 -4
  74. data/public/vendor/github/systemjs/plugin-json@0.1.0/.jspm-hash +0 -1
  75. data/public/vendor/github/twbs/bootstrap@3.3.5/.jspm-hash +0 -1
  76. data/public/vendor/github/twbs/bootstrap@3.3.5/.jspm.json +0 -100
  77. data/public/vendor/npm/amdefine@1.0.0/.jspm-hash +0 -1
  78. data/public/vendor/npm/amdefine@1.0.0/.jspm.json +0 -55
  79. data/public/vendor/npm/babel-core@5.8.23/.jspm-hash +0 -1
  80. data/public/vendor/npm/babel-runtime@5.8.20/.jspm-hash +0 -1
  81. data/public/vendor/npm/babel-runtime@5.8.20/.npmignore +0 -2
  82. data/public/vendor/npm/base62@0.1.1/.jspm-hash +0 -1
  83. data/public/vendor/npm/base62@0.1.1/.jspm.json +0 -49
  84. data/public/vendor/npm/base62@0.1.1/.travis.yml +0 -4
  85. data/public/vendor/npm/base64-js@0.0.8/.jspm-hash +0 -1
  86. data/public/vendor/npm/base64-js@0.0.8/.jspm.json +0 -77
  87. data/public/vendor/npm/base64-js@0.0.8/.travis.yml +0 -5
  88. data/public/vendor/npm/buffer@3.4.3/.jspm-hash +0 -1
  89. data/public/vendor/npm/buffer@3.4.3/.jspm.json +0 -105
  90. data/public/vendor/npm/buffer@3.4.3/.npmignore +0 -1
  91. data/public/vendor/npm/buffer@3.4.3/.travis.yml +0 -8
  92. data/public/vendor/npm/buffer@3.4.3/.zuul.yml +0 -20
  93. data/public/vendor/npm/core-js@1.1.2/.eslintrc +0 -36
  94. data/public/vendor/npm/core-js@1.1.2/.gitattributes +0 -1
  95. data/public/vendor/npm/core-js@1.1.2/.jspm-hash +0 -1
  96. data/public/vendor/npm/core-js@1.1.2/.npmignore +0 -10
  97. data/public/vendor/npm/core-js@1.1.2/.travis.yml +0 -3
  98. data/public/vendor/npm/core-util-is@1.0.1/.jspm-hash +0 -1
  99. data/public/vendor/npm/core-util-is@1.0.1/.jspm.json +0 -58
  100. data/public/vendor/npm/envify@3.4.0/.jspm-hash +0 -1
  101. data/public/vendor/npm/envify@3.4.0/.jspm.json +0 -72
  102. data/public/vendor/npm/envify@3.4.0/.npmignore +0 -2
  103. data/public/vendor/npm/esprima-fb@13001.1001.0-dev-harmony-fb/.jspm-hash +0 -1
  104. data/public/vendor/npm/esprima-fb@13001.1001.0-dev-harmony-fb/.jspm.json +0 -102
  105. data/public/vendor/npm/events@1.0.2/.jspm-hash +0 -1
  106. data/public/vendor/npm/events@1.0.2/.jspm.json +0 -67
  107. data/public/vendor/npm/events@1.0.2/.npmignore +0 -1
  108. data/public/vendor/npm/events@1.0.2/.travis.yml +0 -7
  109. data/public/vendor/npm/events@1.0.2/.zuul.yml +0 -12
  110. data/public/vendor/npm/font-awesome@4.4.0/.jspm-hash +0 -1
  111. data/public/vendor/npm/font-awesome@4.4.0/.jspm.json +0 -81
  112. data/public/vendor/npm/font-awesome@4.4.0/.npmignore +0 -42
  113. data/public/vendor/npm/ieee754@1.1.6/.jspm-hash +0 -1
  114. data/public/vendor/npm/ieee754@1.1.6/.jspm.json +0 -70
  115. data/public/vendor/npm/ieee754@1.1.6/.travis.yml +0 -7
  116. data/public/vendor/npm/ieee754@1.1.6/.zuul.yml +0 -20
  117. data/public/vendor/npm/inherits@2.0.1/.jspm-hash +0 -1
  118. data/public/vendor/npm/inherits@2.0.1/.jspm.json +0 -60
  119. data/public/vendor/npm/is-array@1.0.1/.jepso-ci.json +0 -3
  120. data/public/vendor/npm/is-array@1.0.1/.jspm-hash +0 -1
  121. data/public/vendor/npm/is-array@1.0.1/.jspm.json +0 -42
  122. data/public/vendor/npm/is-array@1.0.1/.npmignore +0 -0
  123. data/public/vendor/npm/isarray@0.0.1/.jspm-hash +0 -1
  124. data/public/vendor/npm/isarray@0.0.1/.jspm.json +0 -51
  125. data/public/vendor/npm/jstransform@10.1.0/.jshintrc +0 -28
  126. data/public/vendor/npm/jstransform@10.1.0/.jspm-hash +0 -1
  127. data/public/vendor/npm/jstransform@10.1.0/.jspm.json +0 -95
  128. data/public/vendor/npm/jstransform@10.1.0/.npmignore +0 -4
  129. data/public/vendor/npm/jstransform@10.1.0/.travis.yml +0 -8
  130. data/public/vendor/npm/path-browserify@0.0.0/.jspm-hash +0 -1
  131. data/public/vendor/npm/path-browserify@0.0.0/.jspm.json +0 -56
  132. data/public/vendor/npm/process@0.10.1/.jspm-hash +0 -1
  133. data/public/vendor/npm/react@0.13.3/.jspm-hash +0 -1
  134. data/public/vendor/npm/react@0.13.3/.jspm.json +0 -77
  135. data/public/vendor/npm/readable-stream@1.1.13/.jspm-hash +0 -1
  136. data/public/vendor/npm/readable-stream@1.1.13/.jspm.json +0 -95
  137. data/public/vendor/npm/readable-stream@1.1.13/.npmignore +0 -5
  138. data/public/vendor/npm/source-map@0.1.31/.jspm-hash +0 -1
  139. data/public/vendor/npm/source-map@0.1.31/.jspm.json +0 -133
  140. data/public/vendor/npm/source-map@0.1.31/.npmignore +0 -2
  141. data/public/vendor/npm/source-map@0.1.31/.travis.yml +0 -4
  142. data/public/vendor/npm/stream-browserify@1.0.0/.jspm-hash +0 -1
  143. data/public/vendor/npm/stream-browserify@1.0.0/.jspm.json +0 -77
  144. data/public/vendor/npm/stream-browserify@1.0.0/.travis.yml +0 -4
  145. data/public/vendor/npm/string_decoder@0.10.31/.jspm-hash +0 -1
  146. data/public/vendor/npm/string_decoder@0.10.31/.jspm.json +0 -58
  147. data/public/vendor/npm/string_decoder@0.10.31/.npmignore +0 -2
  148. data/public/vendor/npm/through@2.3.8/.jspm-hash +0 -1
  149. data/public/vendor/npm/through@2.3.8/.jspm.json +0 -72
  150. data/public/vendor/npm/through@2.3.8/.travis.yml +0 -5
  151. data/public/vendor/npm/underscore@1.8.3/.jspm-hash +0 -1
  152. data/public/vendor/npm/underscore@1.8.3/.jspm.json +0 -74
  153. data/public/vendor/npm/util@0.10.3/.jspm-hash +0 -1
  154. data/public/vendor/npm/util@0.10.3/.jspm.json +0 -58
  155. data/public/vendor/npm/util@0.10.3/.npmignore +0 -1
  156. data/public/vendor/npm/util@0.10.3/.travis.yml +0 -8
  157. data/public/vendor/npm/util@0.10.3/.zuul.yml +0 -10
  158. data/public/vendor/npm/webshim@1.15.8/.gitattributes +0 -12
  159. data/public/vendor/npm/webshim@1.15.8/.jspm-hash +0 -1
  160. data/public/vendor/npm/webshim@1.15.8/.jspm.json +0 -92
  161. data/public/vendor/npm/webshim@1.15.8/.npmignore +0 -16
  162. data/public/vendor/npm/webshim@1.15.8/.project +0 -12
  163. data/public/vendor/npm/webshim@1.15.8/demos/demos/filereader/upload/.keep +0 -0
  164. data/sequenceserver.gemspec +0 -55
  165. data/spec/blast_versions/blast_2.2.30/blast_2.2.30_spec.rb +0 -228
  166. data/spec/blast_versions/blast_2.2.30/import_spec_capybara_local_2.2.30.rb +0 -583
  167. data/spec/blast_versions/blast_2.2.31/blast_2.2.31_spec.rb +0 -228
  168. data/spec/blast_versions/blast_2.2.31/import_spec_capybara_local_2.2.31.rb +0 -587
  169. data/spec/blast_versions/blast_2.3.0/blast_2.3.0_spec.rb +0 -229
  170. data/spec/blast_versions/blast_2.3.0/import_spec_capybara_local_2.3.0.rb +0 -587
  171. data/spec/blast_versions/blast_2.4.0/blast_2.4.0_spec.rb +0 -228
  172. data/spec/blast_versions/blast_2.4.0/import_spec_capybara_local_2.4.0.rb +0 -588
  173. data/spec/blast_versions/blast_2.5.0/blast_2.5.0_spec.rb +0 -228
  174. data/spec/blast_versions/blast_2.5.0/import_spec_capybara_local_2.5.0.rb +0 -587
  175. data/spec/blast_versions/blast_2.6.0/blast_2.6.0_spec.rb +0 -228
  176. data/spec/blast_versions/blast_2.6.0/import_spec_capybara_local_2.6.0.rb +0 -587
  177. data/spec/blast_versions/blast_2.7.1/blast_2.7.1_spec.rb +0 -228
  178. data/spec/blast_versions/blast_2.7.1/import_spec_capybara_local_2.7.1.rb +0 -587
  179. data/spec/blast_versions/blast_2.8.1/blast_2.8.1_spec.rb +0 -228
  180. data/spec/blast_versions/blast_2.8.1/import_spec_capybara_local_2.8.1.rb +0 -587
  181. data/spec/blast_versions/blast_2.9.0/blast_2.9.0_spec.rb +0 -228
  182. data/spec/blast_versions/blast_2.9.0/import_spec_capybara_local_2.9.0.rb +0 -585
  183. data/spec/blast_versions/diamond_0.9.24/diamond_0.9.24_spec.rb +0 -176
  184. data/spec/blast_versions/diamond_0.9.24/import_spec_capybara_local_0.9.24.rb +0 -237
  185. data/spec/capybara_spec.rb +0 -345
  186. data/spec/config_spec.rb +0 -87
  187. data/spec/database/funky_ids/funky_ids.fa +0 -16
  188. data/spec/database/funky_ids/v4/funky_ids.fa.nhd +0 -8
  189. data/spec/database/funky_ids/v4/funky_ids.fa.nhi +0 -0
  190. data/spec/database/funky_ids/v4/funky_ids.fa.nhr +0 -0
  191. data/spec/database/funky_ids/v4/funky_ids.fa.nin +0 -0
  192. data/spec/database/funky_ids/v4/funky_ids.fa.nog +0 -0
  193. data/spec/database/funky_ids/v4/funky_ids.fa.nsd +0 -15
  194. data/spec/database/funky_ids/v4/funky_ids.fa.nsi +0 -0
  195. data/spec/database/funky_ids/v4/funky_ids.fa.nsq +0 -0
  196. data/spec/database/funky_ids/v5/funky_ids.fa.ndb +0 -0
  197. data/spec/database/funky_ids/v5/funky_ids.fa.nhd +0 -8
  198. data/spec/database/funky_ids/v5/funky_ids.fa.nhi +0 -0
  199. data/spec/database/funky_ids/v5/funky_ids.fa.nhr +0 -0
  200. data/spec/database/funky_ids/v5/funky_ids.fa.nin +0 -0
  201. data/spec/database/funky_ids/v5/funky_ids.fa.nog +0 -0
  202. data/spec/database/funky_ids/v5/funky_ids.fa.nos +0 -0
  203. data/spec/database/funky_ids/v5/funky_ids.fa.not +0 -0
  204. data/spec/database/funky_ids/v5/funky_ids.fa.nsq +0 -0
  205. data/spec/database/funky_ids/v5/funky_ids.fa.ntf +0 -0
  206. data/spec/database/funky_ids/v5/funky_ids.fa.nto +0 -0
  207. data/spec/database/funky_sequences/README.md +0 -14
  208. data/spec/database/funky_sequences/funky_aa_sequences.fa +0 -7
  209. data/spec/database/funky_sequences/funky_aa_sequences.fa.phd +0 -3
  210. data/spec/database/funky_sequences/funky_aa_sequences.fa.phi +0 -0
  211. data/spec/database/funky_sequences/funky_aa_sequences.fa.phr +0 -0
  212. data/spec/database/funky_sequences/funky_aa_sequences.fa.pin +0 -0
  213. data/spec/database/funky_sequences/funky_aa_sequences.fa.pog +0 -0
  214. data/spec/database/funky_sequences/funky_aa_sequences.fa.psd +0 -6
  215. data/spec/database/funky_sequences/funky_aa_sequences.fa.psi +0 -0
  216. data/spec/database/funky_sequences/funky_aa_sequences.fa.psq +0 -0
  217. data/spec/database/funky_sequences/funky_na_sequences.fa +0 -2
  218. data/spec/database/funky_sequences/funky_na_sequences.fa.nhr +0 -0
  219. data/spec/database/funky_sequences/funky_na_sequences.fa.nin +0 -0
  220. data/spec/database/funky_sequences/funky_na_sequences.fa.nog +0 -0
  221. data/spec/database/funky_sequences/funky_na_sequences.fa.nsd +0 -2
  222. data/spec/database/funky_sequences/funky_na_sequences.fa.nsi +0 -0
  223. data/spec/database/funky_sequences/funky_na_sequences.fa.nsq +0 -0
  224. data/spec/database/ox_parse_error/query.fa +0 -1
  225. data/spec/database/ox_parse_error/rand1.fa +0 -2
  226. data/spec/database/ox_parse_error/rand1.fa.nhd +0 -1
  227. data/spec/database/ox_parse_error/rand1.fa.nhi +0 -0
  228. data/spec/database/ox_parse_error/rand1.fa.nhr +0 -0
  229. data/spec/database/ox_parse_error/rand1.fa.nin +0 -0
  230. data/spec/database/ox_parse_error/rand1.fa.nog +0 -0
  231. data/spec/database/ox_parse_error/rand1.fa.nsd +0 -2
  232. data/spec/database/ox_parse_error/rand1.fa.nsi +0 -0
  233. data/spec/database/ox_parse_error/rand1.fa.nsq +0 -0
  234. data/spec/database/ox_parse_error/rand2.fa +0 -2
  235. data/spec/database/ox_parse_error/rand2.fa.nhd +0 -1
  236. data/spec/database/ox_parse_error/rand2.fa.nhi +0 -0
  237. data/spec/database/ox_parse_error/rand2.fa.nhr +0 -0
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  240. data/spec/database/ox_parse_error/rand2.fa.nsd +0 -2
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  242. data/spec/database/ox_parse_error/rand2.fa.nsq +0 -0
  243. data/spec/database/ox_parse_error_unique_ids/query.fa +0 -1
  244. data/spec/database/ox_parse_error_unique_ids/rand1.fa +0 -2
  245. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nhd +0 -1
  246. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nhi +0 -0
  247. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nhr +0 -0
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  249. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nog +0 -0
  250. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nsd +0 -2
  251. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nsi +0 -0
  252. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nsq +0 -0
  253. data/spec/database/ox_parse_error_unique_ids/rand2.fa +0 -2
  254. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nhd +0 -1
  255. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nhi +0 -0
  256. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nhr +0 -0
  257. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nin +0 -0
  258. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nog +0 -0
  259. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nsd +0 -2
  260. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nsi +0 -0
  261. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nsq +0 -0
  262. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa +0 -6
  263. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nhd +0 -1
  264. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nhi +0 -0
  265. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nhr +0 -0
  266. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nin +0 -0
  267. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nog +0 -0
  268. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nsd +0 -2
  269. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nsi +0 -0
  270. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nsq +0 -0
  271. data/spec/database/sample/genome/Solenopsis_invicta/Solenopsis_invicta_gnG_subset.fasta.ndb +0 -0
  272. data/spec/database/sample/genome/Solenopsis_invicta/Solenopsis_invicta_gnG_subset.fasta.nhd +0 -8
  273. data/spec/database/sample/genome/Solenopsis_invicta/Solenopsis_invicta_gnG_subset.fasta.nhi +0 -0
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  481. data/spec/dotdir/diamond_0.9.24/blastx/job.yaml +0 -8
  482. data/spec/dotdir/diamond_0.9.24/blastx_nohits/DIAMOND_BLASTX_NOHITS_0.9.24.xml +0 -41
  483. data/spec/dotdir/diamond_0.9.24/blastx_nohits/job.yaml +0 -8
  484. data/spec/download_helper.rb +0 -35
  485. data/spec/empty_config.yml +0 -0
  486. data/spec/makeblastdb_spec.rb +0 -121
  487. data/spec/routes_spec.rb +0 -93
  488. data/spec/sample.conf +0 -2
  489. data/spec/sequence_spec.rb +0 -99
  490. data/spec/sequences/MH011443_1_gi_1486783306_gb_MH011443_1.txt +0 -6
  491. data/spec/sequences/MH011443_1_gi_1486783307_gb_AYF55702_1.txt +0 -6
  492. data/spec/sequences/MH011443_1_gi_1528997474_gb_MH447967_1.txt +0 -30
  493. data/spec/sequences/MH011443_1_sp_P04637_P53_HUMAN.txt +0 -6
  494. data/spec/sequences/Nucleotide_TP53_COX41.fasta +0 -15
  495. data/spec/sequences/Protein_TP53_COX41.fasta +0 -12
  496. data/spec/sequences/Query_1_SI2_2_0_06267.txt +0 -6
  497. data/spec/sequences/alignment-2_hits.txt +0 -12
  498. data/spec/sequences/alignment-35_hits_diamond_blastp.txt +0 -210
  499. data/spec/sequences/alignment-35_hits_diamond_blastx.txt +0 -210
  500. data/spec/sequences/alignment-3_hits.txt +0 -18
  501. data/spec/sequences/alignment-40_hits_blastn.txt +0 -246
  502. data/spec/sequences/alignment-40_hits_blastp.txt +0 -240
  503. data/spec/sequences/alignment-40_hits_blastp_2.2.30.txt +0 -240
  504. data/spec/sequences/alignment-40_hits_blastx.txt +0 -240
  505. data/spec/sequences/alignment-40_hits_tblastn.txt +0 -240
  506. data/spec/sequences/alignment-40_hits_tblastn_2.2.30.txt +0 -240
  507. data/spec/sequences/alignment-40_hits_tblastx.txt +0 -2664
  508. data/spec/sequences/alignment-4_hits.txt +0 -24
  509. data/spec/sequences/alignment-4_hits_blastn.txt +0 -24
  510. data/spec/sequences/alignment-4_hits_blastp.txt +0 -24
  511. data/spec/sequences/alignment-4_hits_blastp_2.2.30.txt +0 -24
  512. data/spec/sequences/alignment-4_hits_blastx.txt +0 -24
  513. data/spec/sequences/alignment-4_hits_diamond_blastp.txt +0 -24
  514. data/spec/sequences/alignment-4_hits_diamond_blastx.txt +0 -24
  515. data/spec/sequences/alignment-4_hits_tblastn.txt +0 -24
  516. data/spec/sequences/alignment-4_hits_tblastn_2.2.30.txt +0 -24
  517. data/spec/sequences/alignment-4_hits_tblastx.txt +0 -318
  518. data/spec/sequences/nucleotide_query.fa +0 -21
  519. data/spec/sequences/problematic_query.fa +0 -5
  520. data/spec/sequences/protein_query.fa +0 -9
  521. data/spec/sequences/sample_query_fire_ant_obps.fa +0 -44
  522. data/spec/sequences/sequenceserver-2_hits.fa +0 -10
  523. data/spec/sequences/sequenceserver-SI2.2.0_06267.fa +0 -5
  524. data/spec/sequences/sp_P04637_P53_HUMAN_gi_1099170394_ref_XP_018868681_1.txt +0 -6
  525. data/spec/sequences/sp_P04637_P53_HUMAN_gi_120407068_ref_NP_000537_3.txt +0 -6
  526. data/spec/sequences/sp_P04637_P53_HUMAN_gi_1484127324_gb_MG595988_1.txt +0 -6
  527. data/spec/sequences/sp_P04637_P53_HUMAN_gi_395440626_gb_JQ694049_1.txt +0 -6
  528. data/spec/sequences/sp_P04637_P53_HUMAN_sp_P04637_P53_HUMAN.txt +0 -6
  529. data/spec/sequenceserver_spec.rb +0 -90
  530. data/spec/spec_helper.rb +0 -63
data/spec/dotdir/blast_2.3.0/blastx/job.yaml DELETED
@@ -1,8 +0,0 @@
1
- --- !ruby/object:SequenceServer::BLAST::Job
2
- id: 'blast_2.3.0/blastx'
3
- submitted_at: 2019-06-28 13:12:05.464325700 +01:00
4
- imported_xml_file: BLASTX_XML_2.3.0.xml
5
- advanced_params: {}
6
- databases: []
7
- completed_at: 2019-06-28 13:12:05.495208800 +01:00
8
- exitstatus: 0
data/spec/dotdir/blast_2.3.0/tblastn/TBLASTN_XML_2.3.0.xml DELETED
@@ -1,1181 +0,0 @@
1
- <?xml version="1.0"?>
2
- <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
3
- <BlastOutput>
4
- <BlastOutput_program>tblastn</BlastOutput_program>
5
- <BlastOutput_version>TBLASTN 2.3.0+</BlastOutput_version>
6
- <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
7
- <BlastOutput_db>nt_db/nt</BlastOutput_db>
8
- <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
9
- <BlastOutput_query-def>sp|P04637|P53_HUMAN Cellular tumor antigen p53 OS=Homo sapiens OX=9606 GN=TP53 PE=1 SV=4</BlastOutput_query-def>
10
- <BlastOutput_query-len>393</BlastOutput_query-len>
11
- <BlastOutput_param>
12
- <Parameters>
13
- <Parameters_matrix>BLOSUM62</Parameters_matrix>
14
- <Parameters_expect>10</Parameters_expect>
15
- <Parameters_gap-open>11</Parameters_gap-open>
16
- <Parameters_gap-extend>1</Parameters_gap-extend>
17
- <Parameters_filter>L;</Parameters_filter>
18
- </Parameters>
19
- </BlastOutput_param>
20
- <BlastOutput_iterations>
21
- <Iteration>
22
- <Iteration_iter-num>1</Iteration_iter-num>
23
- <Iteration_query-ID>Query_1</Iteration_query-ID>
24
- <Iteration_query-def>sp|P04637|P53_HUMAN Cellular tumor antigen p53 OS=Homo sapiens OX=9606 GN=TP53 PE=1 SV=4</Iteration_query-def>
25
- <Iteration_query-len>393</Iteration_query-len>
26
- <Iteration_hits>
27
- <Hit>
28
- <Hit_num>1</Hit_num>
29
- <Hit_id>gi|395440626|gb|JQ694049.1|</Hit_id>
30
- <Hit_def>Homo sapiens isolate iPCH358_Col1 tumor suppressor p53 (TP53) mRNA, complete cds &gt;gi|395440628|gb|JQ694050.1| Homo sapiens isolate iPCH358_Col3 tumor suppressor p53 (TP53) mRNA, complete cds</Hit_def>
31
- <Hit_accession>JQ694049</Hit_accession>
32
- <Hit_len>1270</Hit_len>
33
- <Hit_hsps>
34
- <Hsp>
35
- <Hsp_num>1</Hsp_num>
36
- <Hsp_bit-score>752.281</Hsp_bit-score>
37
- <Hsp_score>1941</Hsp_score>
38
- <Hsp_evalue>0</Hsp_evalue>
39
- <Hsp_query-from>1</Hsp_query-from>
40
- <Hsp_query-to>393</Hsp_query-to>
41
- <Hsp_hit-from>24</Hsp_hit-from>
42
- <Hsp_hit-to>1202</Hsp_hit-to>
43
- <Hsp_query-frame>0</Hsp_query-frame>
44
- <Hsp_hit-frame>3</Hsp_hit-frame>
45
- <Hsp_identity>393</Hsp_identity>
46
- <Hsp_positive>393</Hsp_positive>
47
- <Hsp_gaps>0</Hsp_gaps>
48
- <Hsp_align-len>393</Hsp_align-len>
49
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
50
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
51
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
52
- </Hsp>
53
- </Hit_hsps>
54
- </Hit>
55
- <Hit>
56
- <Hit_num>2</Hit_num>
57
- <Hit_id>gi|1367198996|ref|XM_001172077.5|</Hit_id>
58
- <Hit_def>PREDICTED: Pan troglodytes tumor protein p53 (TP53), transcript variant X2, mRNA</Hit_def>
59
- <Hit_accession>XM_001172077</Hit_accession>
60
- <Hit_len>2573</Hit_len>
61
- <Hit_hsps>
62
- <Hsp>
63
- <Hsp_num>1</Hsp_num>
64
- <Hsp_bit-score>751.51</Hsp_bit-score>
65
- <Hsp_score>1939</Hsp_score>
66
- <Hsp_evalue>0</Hsp_evalue>
67
- <Hsp_query-from>1</Hsp_query-from>
68
- <Hsp_query-to>393</Hsp_query-to>
69
- <Hsp_hit-from>203</Hsp_hit-from>
70
- <Hsp_hit-to>1381</Hsp_hit-to>
71
- <Hsp_query-frame>0</Hsp_query-frame>
72
- <Hsp_hit-frame>2</Hsp_hit-frame>
73
- <Hsp_identity>393</Hsp_identity>
74
- <Hsp_positive>393</Hsp_positive>
75
- <Hsp_gaps>0</Hsp_gaps>
76
- <Hsp_align-len>393</Hsp_align-len>
77
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
78
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
79
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
80
- </Hsp>
81
- </Hit_hsps>
82
- </Hit>
83
- <Hit>
84
- <Hit_num>3</Hit_num>
85
- <Hit_id>gi|675705924|ref|XM_003810066.2|</Hit_id>
86
- <Hit_def>PREDICTED: Pan paniscus tumor protein p53 (TP53), transcript variant X2, mRNA</Hit_def>
87
- <Hit_accession>XM_003810066</Hit_accession>
88
- <Hit_len>2562</Hit_len>
89
- <Hit_hsps>
90
- <Hsp>
91
- <Hsp_num>1</Hsp_num>
92
- <Hsp_bit-score>751.51</Hsp_bit-score>
93
- <Hsp_score>1939</Hsp_score>
94
- <Hsp_evalue>0</Hsp_evalue>
95
- <Hsp_query-from>1</Hsp_query-from>
96
- <Hsp_query-to>393</Hsp_query-to>
97
- <Hsp_hit-from>203</Hsp_hit-from>
98
- <Hsp_hit-to>1381</Hsp_hit-to>
99
- <Hsp_query-frame>0</Hsp_query-frame>
100
- <Hsp_hit-frame>2</Hsp_hit-frame>
101
- <Hsp_identity>393</Hsp_identity>
102
- <Hsp_positive>393</Hsp_positive>
103
- <Hsp_gaps>0</Hsp_gaps>
104
- <Hsp_align-len>393</Hsp_align-len>
105
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
106
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
107
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
108
- </Hsp>
109
- </Hit_hsps>
110
- </Hit>
111
- <Hit>
112
- <Hit_num>4</Hit_num>
113
- <Hit_id>gi|631786534|tpe|HG975427.1|</Hit_id>
114
- <Hit_def>TPA: Homo sapiens Processed transcript p53-mRNA (p53 gene)</Hit_def>
115
- <Hit_accession>HG975427</Hit_accession>
116
- <Hit_len>2586</Hit_len>
117
- <Hit_hsps>
118
- <Hsp>
119
- <Hsp_num>1</Hsp_num>
120
- <Hsp_bit-score>751.51</Hsp_bit-score>
121
- <Hsp_score>1939</Hsp_score>
122
- <Hsp_evalue>0</Hsp_evalue>
123
- <Hsp_query-from>1</Hsp_query-from>
124
- <Hsp_query-to>393</Hsp_query-to>
125
- <Hsp_hit-from>198</Hsp_hit-from>
126
- <Hsp_hit-to>1376</Hsp_hit-to>
127
- <Hsp_query-frame>0</Hsp_query-frame>
128
- <Hsp_hit-frame>3</Hsp_hit-frame>
129
- <Hsp_identity>393</Hsp_identity>
130
- <Hsp_positive>393</Hsp_positive>
131
- <Hsp_gaps>0</Hsp_gaps>
132
- <Hsp_align-len>393</Hsp_align-len>
133
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
134
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
135
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
136
- </Hsp>
137
- </Hit_hsps>
138
- </Hit>
139
- <Hit>
140
- <Hit_num>5</Hit_num>
141
- <Hit_id>gi|371502115|ref|NM_001126112.2|</Hit_id>
142
- <Hit_def>Homo sapiens tumor protein p53 (TP53), transcript variant 2, mRNA &gt;gi|454521556|ref|NM_001276761.1| Homo sapiens tumor protein p53 (TP53), transcript variant 2, mRNA</Hit_def>
143
- <Hit_accession>NM_001126112</Hit_accession>
144
- <Hit_len>2588</Hit_len>
145
- <Hit_hsps>
146
- <Hsp>
147
- <Hsp_num>1</Hsp_num>
148
- <Hsp_bit-score>751.51</Hsp_bit-score>
149
- <Hsp_score>1939</Hsp_score>
150
- <Hsp_evalue>0</Hsp_evalue>
151
- <Hsp_query-from>1</Hsp_query-from>
152
- <Hsp_query-to>393</Hsp_query-to>
153
- <Hsp_hit-from>200</Hsp_hit-from>
154
- <Hsp_hit-to>1378</Hsp_hit-to>
155
- <Hsp_query-frame>0</Hsp_query-frame>
156
- <Hsp_hit-frame>2</Hsp_hit-frame>
157
- <Hsp_identity>393</Hsp_identity>
158
- <Hsp_positive>393</Hsp_positive>
159
- <Hsp_gaps>0</Hsp_gaps>
160
- <Hsp_align-len>393</Hsp_align-len>
161
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
162
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
163
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
164
- </Hsp>
165
- </Hit_hsps>
166
- </Hit>
167
- <Hit>
168
- <Hit_num>6</Hit_num>
169
- <Hit_id>gi|371502114|ref|NM_000546.5|</Hit_id>
170
- <Hit_def>Homo sapiens tumor protein p53 (TP53), transcript variant 1, mRNA &gt;gi|454520872|ref|NM_001276760.1| Homo sapiens tumor protein p53 (TP53), transcript variant 1, mRNA</Hit_def>
171
- <Hit_accession>NM_000546</Hit_accession>
172
- <Hit_len>2591</Hit_len>
173
- <Hit_hsps>
174
- <Hsp>
175
- <Hsp_num>1</Hsp_num>
176
- <Hsp_bit-score>751.51</Hsp_bit-score>
177
- <Hsp_score>1939</Hsp_score>
178
- <Hsp_evalue>0</Hsp_evalue>
179
- <Hsp_query-from>1</Hsp_query-from>
180
- <Hsp_query-to>393</Hsp_query-to>
181
- <Hsp_hit-from>203</Hsp_hit-from>
182
- <Hsp_hit-to>1381</Hsp_hit-to>
183
- <Hsp_query-frame>0</Hsp_query-frame>
184
- <Hsp_hit-frame>2</Hsp_hit-frame>
185
- <Hsp_identity>393</Hsp_identity>
186
- <Hsp_positive>393</Hsp_positive>
187
- <Hsp_gaps>0</Hsp_gaps>
188
- <Hsp_align-len>393</Hsp_align-len>
189
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
190
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
191
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
192
- </Hsp>
193
- </Hit_hsps>
194
- </Hit>
195
- <Hit>
196
- <Hit_num>7</Hit_num>
197
- <Hit_id>gi|339813|gb|M14694.1|HUMTP53A</Hit_id>
198
- <Hit_def>Human p53 cellular tumor antigen mRNA, complete cds</Hit_def>
199
- <Hit_accession>M14694</Hit_accession>
200
- <Hit_len>1307</Hit_len>
201
- <Hit_hsps>
202
- <Hsp>
203
- <Hsp_num>1</Hsp_num>
204
- <Hsp_bit-score>751.51</Hsp_bit-score>
205
- <Hsp_score>1939</Hsp_score>
206
- <Hsp_evalue>0</Hsp_evalue>
207
- <Hsp_query-from>1</Hsp_query-from>
208
- <Hsp_query-to>393</Hsp_query-to>
209
- <Hsp_hit-from>126</Hsp_hit-from>
210
- <Hsp_hit-to>1304</Hsp_hit-to>
211
- <Hsp_query-frame>0</Hsp_query-frame>
212
- <Hsp_hit-frame>3</Hsp_hit-frame>
213
- <Hsp_identity>391</Hsp_identity>
214
- <Hsp_positive>391</Hsp_positive>
215
- <Hsp_gaps>0</Hsp_gaps>
216
- <Hsp_align-len>393</Hsp_align-len>
217
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
218
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPRVAPAPATPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
219
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAP VAPAPA PTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
220
- </Hsp>
221
- </Hit_hsps>
222
- </Hit>
223
- <Hit>
224
- <Hit_num>8</Hit_num>
225
- <Hit_id>gi|35209|emb|X02469.1|</Hit_id>
226
- <Hit_def>Human mRNA for p53 cellular tumor antigen</Hit_def>
227
- <Hit_accession>X02469</Hit_accession>
228
- <Hit_len>1317</Hit_len>
229
- <Hit_hsps>
230
- <Hsp>
231
- <Hsp_num>1</Hsp_num>
232
- <Hsp_bit-score>751.51</Hsp_bit-score>
233
- <Hsp_score>1939</Hsp_score>
234
- <Hsp_evalue>0</Hsp_evalue>
235
- <Hsp_query-from>1</Hsp_query-from>
236
- <Hsp_query-to>393</Hsp_query-to>
237
- <Hsp_hit-from>136</Hsp_hit-from>
238
- <Hsp_hit-to>1314</Hsp_hit-to>
239
- <Hsp_query-frame>0</Hsp_query-frame>
240
- <Hsp_hit-frame>1</Hsp_hit-frame>
241
- <Hsp_identity>393</Hsp_identity>
242
- <Hsp_positive>393</Hsp_positive>
243
- <Hsp_gaps>0</Hsp_gaps>
244
- <Hsp_align-len>393</Hsp_align-len>
245
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
246
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
247
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
248
- </Hsp>
249
- </Hit_hsps>
250
- </Hit>
251
- <Hit>
252
- <Hit_num>9</Hit_num>
253
- <Hit_id>gi|1484127324|gb|MG595988.1|</Hit_id>
254
- <Hit_def>Homo sapiens isolate HKSH-0182-0-1 mutant tumor protein p53 (TP53) mRNA, complete cds</Hit_def>
255
- <Hit_accession>MG595988</Hit_accession>
256
- <Hit_len>1182</Hit_len>
257
- <Hit_hsps>
258
- <Hsp>
259
- <Hsp_num>1</Hsp_num>
260
- <Hsp_bit-score>751.125</Hsp_bit-score>
261
- <Hsp_score>1938</Hsp_score>
262
- <Hsp_evalue>0</Hsp_evalue>
263
- <Hsp_query-from>1</Hsp_query-from>
264
- <Hsp_query-to>393</Hsp_query-to>
265
- <Hsp_hit-from>1</Hsp_hit-from>
266
- <Hsp_hit-to>1179</Hsp_hit-to>
267
- <Hsp_query-frame>0</Hsp_query-frame>
268
- <Hsp_hit-frame>1</Hsp_hit-frame>
269
- <Hsp_identity>393</Hsp_identity>
270
- <Hsp_positive>393</Hsp_positive>
271
- <Hsp_gaps>0</Hsp_gaps>
272
- <Hsp_align-len>393</Hsp_align-len>
273
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
274
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
275
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
276
- </Hsp>
277
- </Hit_hsps>
278
- </Hit>
279
- <Hit>
280
- <Hit_num>10</Hit_num>
281
- <Hit_id>gi|1099170393|ref|XM_019013136.1|</Hit_id>
282
- <Hit_def>PREDICTED: Gorilla gorilla gorilla tumor protein p53 (TP53), transcript variant X1, mRNA</Hit_def>
283
- <Hit_accession>XM_019013136</Hit_accession>
284
- <Hit_len>2691</Hit_len>
285
- <Hit_hsps>
286
- <Hsp>
287
- <Hsp_num>1</Hsp_num>
288
- <Hsp_bit-score>751.125</Hsp_bit-score>
289
- <Hsp_score>1938</Hsp_score>
290
- <Hsp_evalue>0</Hsp_evalue>
291
- <Hsp_query-from>1</Hsp_query-from>
292
- <Hsp_query-to>393</Hsp_query-to>
293
- <Hsp_hit-from>327</Hsp_hit-from>
294
- <Hsp_hit-to>1505</Hsp_hit-to>
295
- <Hsp_query-frame>0</Hsp_query-frame>
296
- <Hsp_hit-frame>3</Hsp_hit-frame>
297
- <Hsp_identity>392</Hsp_identity>
298
- <Hsp_positive>392</Hsp_positive>
299
- <Hsp_gaps>0</Hsp_gaps>
300
- <Hsp_align-len>393</Hsp_align-len>
301
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
302
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPTLNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
303
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSP LNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
304
- </Hsp>
305
- </Hit_hsps>
306
- </Hit>
307
- <Hit>
308
- <Hit_num>11</Hit_num>
309
- <Hit_id>gi|339815|gb|M14695.1|HUMTP53B</Hit_id>
310
- <Hit_def>Human p53 cellular tumor antigen mRNA, complete cds</Hit_def>
311
- <Hit_accession>M14695</Hit_accession>
312
- <Hit_len>1303</Hit_len>
313
- <Hit_hsps>
314
- <Hsp>
315
- <Hsp_num>1</Hsp_num>
316
- <Hsp_bit-score>751.125</Hsp_bit-score>
317
- <Hsp_score>1938</Hsp_score>
318
- <Hsp_evalue>0</Hsp_evalue>
319
- <Hsp_query-from>1</Hsp_query-from>
320
- <Hsp_query-to>393</Hsp_query-to>
321
- <Hsp_hit-from>122</Hsp_hit-from>
322
- <Hsp_hit-to>1300</Hsp_hit-to>
323
- <Hsp_query-frame>0</Hsp_query-frame>
324
- <Hsp_hit-frame>2</Hsp_hit-frame>
325
- <Hsp_identity>392</Hsp_identity>
326
- <Hsp_positive>392</Hsp_positive>
327
- <Hsp_gaps>0</Hsp_gaps>
328
- <Hsp_align-len>393</Hsp_align-len>
329
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
330
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPATPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
331
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPA PTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
332
- </Hsp>
333
- </Hit_hsps>
334
- </Hit>
335
- <Hit>
336
- <Hit_num>12</Hit_num>
337
- <Hit_id>gi|395440630|gb|JQ694051.1|</Hit_id>
338
- <Hit_def>Homo sapiens isolate iPCH358_Col11 tumor suppressor p53 (TP53) mRNA, complete cds</Hit_def>
339
- <Hit_accession>JQ694051</Hit_accession>
340
- <Hit_len>1270</Hit_len>
341
- <Hit_hsps>
342
- <Hsp>
343
- <Hsp_num>1</Hsp_num>
344
- <Hsp_bit-score>750.74</Hsp_bit-score>
345
- <Hsp_score>1937</Hsp_score>
346
- <Hsp_evalue>0</Hsp_evalue>
347
- <Hsp_query-from>1</Hsp_query-from>
348
- <Hsp_query-to>393</Hsp_query-to>
349
- <Hsp_hit-from>24</Hsp_hit-from>
350
- <Hsp_hit-to>1202</Hsp_hit-to>
351
- <Hsp_query-frame>0</Hsp_query-frame>
352
- <Hsp_hit-frame>3</Hsp_hit-frame>
353
- <Hsp_identity>392</Hsp_identity>
354
- <Hsp_positive>392</Hsp_positive>
355
- <Hsp_gaps>0</Hsp_gaps>
356
- <Hsp_align-len>393</Hsp_align-len>
357
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
358
- <Hsp_hseq>MEEPQSDPSVEPPXSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
359
- <Hsp_midline>MEEPQSDPSVEPP SQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
360
- </Hsp>
361
- </Hit_hsps>
362
- </Hit>
363
- <Hit>
364
- <Hit_num>13</Hit_num>
365
- <Hit_id>gi|7595311|gb|AF192534.1|AF192534</Hit_id>
366
- <Hit_def>Expression vector Ad5CMV-p53 tumor suppressor protein p53 (p53) expression cassette, complete sequence</Hit_def>
367
- <Hit_accession>AF192534</Hit_accession>
368
- <Hit_len>2355</Hit_len>
369
- <Hit_hsps>
370
- <Hsp>
371
- <Hsp_num>1</Hsp_num>
372
- <Hsp_bit-score>750.74</Hsp_bit-score>
373
- <Hsp_score>1937</Hsp_score>
374
- <Hsp_evalue>0</Hsp_evalue>
375
- <Hsp_query-from>1</Hsp_query-from>
376
- <Hsp_query-to>393</Hsp_query-to>
377
- <Hsp_hit-from>921</Hsp_hit-from>
378
- <Hsp_hit-to>2099</Hsp_hit-to>
379
- <Hsp_query-frame>0</Hsp_query-frame>
380
- <Hsp_hit-frame>3</Hsp_hit-frame>
381
- <Hsp_identity>393</Hsp_identity>
382
- <Hsp_positive>393</Hsp_positive>
383
- <Hsp_gaps>0</Hsp_gaps>
384
- <Hsp_align-len>393</Hsp_align-len>
385
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
386
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
387
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
388
- </Hsp>
389
- </Hit_hsps>
390
- </Hit>
391
- <Hit>
392
- <Hit_num>14</Hit_num>
393
- <Hit_id>gi|1484127332|gb|MG595992.1|</Hit_id>
394
- <Hit_def>Homo sapiens isolate TWH-0602-0-1 mutant tumor protein p53 (TP53) mRNA, complete cds</Hit_def>
395
- <Hit_accession>MG595992</Hit_accession>
396
- <Hit_len>1182</Hit_len>
397
- <Hit_hsps>
398
- <Hsp>
399
- <Hsp_num>1</Hsp_num>
400
- <Hsp_bit-score>750.355</Hsp_bit-score>
401
- <Hsp_score>1936</Hsp_score>
402
- <Hsp_evalue>0</Hsp_evalue>
403
- <Hsp_query-from>1</Hsp_query-from>
404
- <Hsp_query-to>393</Hsp_query-to>
405
- <Hsp_hit-from>1</Hsp_hit-from>
406
- <Hsp_hit-to>1179</Hsp_hit-to>
407
- <Hsp_query-frame>0</Hsp_query-frame>
408
- <Hsp_hit-frame>1</Hsp_hit-frame>
409
- <Hsp_identity>392</Hsp_identity>
410
- <Hsp_positive>392</Hsp_positive>
411
- <Hsp_gaps>0</Hsp_gaps>
412
- <Hsp_align-len>393</Hsp_align-len>
413
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
414
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENFRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
415
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEEN RKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
416
- </Hsp>
417
- </Hit_hsps>
418
- </Hit>
419
- <Hit>
420
- <Hit_num>15</Hit_num>
421
- <Hit_id>gi|1484127312|gb|MG595982.1|</Hit_id>
422
- <Hit_def>Homo sapiens isolate TWH-1016-0-1 mutant tumor protein p53 (TP53) mRNA, complete cds</Hit_def>
423
- <Hit_accession>MG595982</Hit_accession>
424
- <Hit_len>1182</Hit_len>
425
- <Hit_hsps>
426
- <Hsp>
427
- <Hsp_num>1</Hsp_num>
428
- <Hsp_bit-score>750.355</Hsp_bit-score>
429
- <Hsp_score>1936</Hsp_score>
430
- <Hsp_evalue>0</Hsp_evalue>
431
- <Hsp_query-from>1</Hsp_query-from>
432
- <Hsp_query-to>393</Hsp_query-to>
433
- <Hsp_hit-from>1</Hsp_hit-from>
434
- <Hsp_hit-to>1179</Hsp_hit-to>
435
- <Hsp_query-frame>0</Hsp_query-frame>
436
- <Hsp_hit-frame>1</Hsp_hit-frame>
437
- <Hsp_identity>392</Hsp_identity>
438
- <Hsp_positive>393</Hsp_positive>
439
- <Hsp_gaps>0</Hsp_gaps>
440
- <Hsp_align-len>393</Hsp_align-len>
441
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
442
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYRQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
443
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIY+QSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
444
- </Hsp>
445
- </Hit_hsps>
446
- </Hit>
447
- <Hit>
448
- <Hit_num>16</Hit_num>
449
- <Hit_id>gi|1484127320|gb|MG595986.1|</Hit_id>
450
- <Hit_def>Homo sapiens isolate TWH-1542-0-1 mutant tumor protein p53 (TP53) mRNA, complete cds</Hit_def>
451
- <Hit_accession>MG595986</Hit_accession>
452
- <Hit_len>1182</Hit_len>
453
- <Hit_hsps>
454
- <Hsp>
455
- <Hsp_num>1</Hsp_num>
456
- <Hsp_bit-score>749.969</Hsp_bit-score>
457
- <Hsp_score>1935</Hsp_score>
458
- <Hsp_evalue>0</Hsp_evalue>
459
- <Hsp_query-from>1</Hsp_query-from>
460
- <Hsp_query-to>393</Hsp_query-to>
461
- <Hsp_hit-from>1</Hsp_hit-from>
462
- <Hsp_hit-to>1179</Hsp_hit-to>
463
- <Hsp_query-frame>0</Hsp_query-frame>
464
- <Hsp_hit-frame>1</Hsp_hit-frame>
465
- <Hsp_identity>392</Hsp_identity>
466
- <Hsp_positive>393</Hsp_positive>
467
- <Hsp_gaps>0</Hsp_gaps>
468
- <Hsp_align-len>393</Hsp_align-len>
469
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
470
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFQHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
471
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTF+HSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
472
- </Hsp>
473
- </Hit_hsps>
474
- </Hit>
475
- <Hit>
476
- <Hit_num>17</Hit_num>
477
- <Hit_id>gi|1099170399|ref|XM_019013137.1|</Hit_id>
478
- <Hit_def>PREDICTED: Gorilla gorilla gorilla tumor protein p53 (TP53), transcript variant X2, mRNA</Hit_def>
479
- <Hit_accession>XM_019013137</Hit_accession>
480
- <Hit_len>2618</Hit_len>
481
- <Hit_hsps>
482
- <Hsp>
483
- <Hsp_num>1</Hsp_num>
484
- <Hsp_bit-score>749.969</Hsp_bit-score>
485
- <Hsp_score>1935</Hsp_score>
486
- <Hsp_evalue>0</Hsp_evalue>
487
- <Hsp_query-from>1</Hsp_query-from>
488
- <Hsp_query-to>393</Hsp_query-to>
489
- <Hsp_hit-from>254</Hsp_hit-from>
490
- <Hsp_hit-to>1432</Hsp_hit-to>
491
- <Hsp_query-frame>0</Hsp_query-frame>
492
- <Hsp_hit-frame>2</Hsp_hit-frame>
493
- <Hsp_identity>392</Hsp_identity>
494
- <Hsp_positive>392</Hsp_positive>
495
- <Hsp_gaps>0</Hsp_gaps>
496
- <Hsp_align-len>393</Hsp_align-len>
497
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
498
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPTLNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
499
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSP LNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
500
- </Hsp>
501
- </Hit_hsps>
502
- </Hit>
503
- <Hit>
504
- <Hit_num>18</Hit_num>
505
- <Hit_id>gi|1099170404|ref|XM_004058511.2|</Hit_id>
506
- <Hit_def>PREDICTED: Gorilla gorilla gorilla tumor protein p53 (TP53), transcript variant X3, mRNA</Hit_def>
507
- <Hit_accession>XM_004058511</Hit_accession>
508
- <Hit_len>2567</Hit_len>
509
- <Hit_hsps>
510
- <Hsp>
511
- <Hsp_num>1</Hsp_num>
512
- <Hsp_bit-score>749.584</Hsp_bit-score>
513
- <Hsp_score>1934</Hsp_score>
514
- <Hsp_evalue>0</Hsp_evalue>
515
- <Hsp_query-from>1</Hsp_query-from>
516
- <Hsp_query-to>393</Hsp_query-to>
517
- <Hsp_hit-from>203</Hsp_hit-from>
518
- <Hsp_hit-to>1381</Hsp_hit-to>
519
- <Hsp_query-frame>0</Hsp_query-frame>
520
- <Hsp_hit-frame>2</Hsp_hit-frame>
521
- <Hsp_identity>392</Hsp_identity>
522
- <Hsp_positive>392</Hsp_positive>
523
- <Hsp_gaps>0</Hsp_gaps>
524
- <Hsp_align-len>393</Hsp_align-len>
525
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
526
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPTLNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
527
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSP LNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
528
- </Hsp>
529
- </Hit_hsps>
530
- </Hit>
531
- <Hit>
532
- <Hit_num>19</Hit_num>
533
- <Hit_id>gi|110624274|dbj|AK225838.1|</Hit_id>
534
- <Hit_def>Homo sapiens mRNA for Cellular tumor antigen p53 variant, clone: FCC127A11</Hit_def>
535
- <Hit_accession>AK225838</Hit_accession>
536
- <Hit_len>1619</Hit_len>
537
- <Hit_hsps>
538
- <Hsp>
539
- <Hsp_num>1</Hsp_num>
540
- <Hsp_bit-score>749.584</Hsp_bit-score>
541
- <Hsp_score>1934</Hsp_score>
542
- <Hsp_evalue>0</Hsp_evalue>
543
- <Hsp_query-from>1</Hsp_query-from>
544
- <Hsp_query-to>393</Hsp_query-to>
545
- <Hsp_hit-from>141</Hsp_hit-from>
546
- <Hsp_hit-to>1319</Hsp_hit-to>
547
- <Hsp_query-frame>0</Hsp_query-frame>
548
- <Hsp_hit-frame>3</Hsp_hit-frame>
549
- <Hsp_identity>392</Hsp_identity>
550
- <Hsp_positive>392</Hsp_positive>
551
- <Hsp_gaps>0</Hsp_gaps>
552
- <Hsp_align-len>393</Hsp_align-len>
553
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
554
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSHHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
555
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQS HMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
556
- </Hsp>
557
- </Hit_hsps>
558
- </Hit>
559
- <Hit>
560
- <Hit_num>20</Hit_num>
561
- <Hit_id>gi|1484127336|gb|MG595994.1|</Hit_id>
562
- <Hit_def>Homo sapiens isolate TWH-1698-0-1 mutant tumor protein p53 (TP53) mRNA, complete cds</Hit_def>
563
- <Hit_accession>MG595994</Hit_accession>
564
- <Hit_len>1182</Hit_len>
565
- <Hit_hsps>
566
- <Hsp>
567
- <Hsp_num>1</Hsp_num>
568
- <Hsp_bit-score>749.199</Hsp_bit-score>
569
- <Hsp_score>1933</Hsp_score>
570
- <Hsp_evalue>0</Hsp_evalue>
571
- <Hsp_query-from>1</Hsp_query-from>
572
- <Hsp_query-to>393</Hsp_query-to>
573
- <Hsp_hit-from>1</Hsp_hit-from>
574
- <Hsp_hit-to>1179</Hsp_hit-to>
575
- <Hsp_query-frame>0</Hsp_query-frame>
576
- <Hsp_hit-frame>1</Hsp_hit-frame>
577
- <Hsp_identity>392</Hsp_identity>
578
- <Hsp_positive>392</Hsp_positive>
579
- <Hsp_gaps>0</Hsp_gaps>
580
- <Hsp_align-len>393</Hsp_align-len>
581
- <Hsp_qseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_qseq>
582
- <Hsp_hseq>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVHVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_hseq>
583
- <Hsp_midline>MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEV VCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDSD</Hsp_midline>
584
- </Hsp>
585
- </Hit_hsps>
586
- </Hit>
587
- </Iteration_hits>
588
- <Iteration_stat>
589
- <Statistics>
590
- <Statistics_db-num>52085306</Statistics_db-num>
591
- <Statistics_db-len>214274604493</Statistics_db-len>
592
- <Statistics_hsp-len>162</Statistics_hsp-len>
593
- <Statistics_eff-space>14550008224752</Statistics_eff-space>
594
- <Statistics_kappa>0.041</Statistics_kappa>
595
- <Statistics_lambda>0.267</Statistics_lambda>
596
- <Statistics_entropy>0.14</Statistics_entropy>
597
- </Statistics>
598
- </Iteration_stat>
599
- </Iteration>
600
- <Iteration>
601
- <Iteration_iter-num>2</Iteration_iter-num>
602
- <Iteration_query-ID>Query_2</Iteration_query-ID>
603
- <Iteration_query-def>sp|P13073|COX41_HUMAN Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Homo sapiens OX=9606 GN=COX4I1 PE=1 SV=1</Iteration_query-def>
604
- <Iteration_query-len>169</Iteration_query-len>
605
- <Iteration_hits>
606
- <Hit>
607
- <Hit_num>1</Hit_num>
608
- <Hit_id>gi|123992972|gb|DQ893162.2|</Hit_id>
609
- <Hit_def>Synthetic construct clone IMAGE:100005792; FLH194512.01X; RZPDo839C0280D cytochrome c oxidase subunit IV isoform 1 (COX4I1) gene, encodes complete protein</Hit_def>
610
- <Hit_accession>DQ893162</Hit_accession>
611
- <Hit_len>550</Hit_len>
612
- <Hit_hsps>
613
- <Hsp>
614
- <Hsp_num>1</Hsp_num>
615
- <Hsp_bit-score>351.673</Hsp_bit-score>
616
- <Hsp_score>901</Hsp_score>
617
- <Hsp_evalue>1.67791e-120</Hsp_evalue>
618
- <Hsp_query-from>1</Hsp_query-from>
619
- <Hsp_query-to>169</Hsp_query-to>
620
- <Hsp_hit-from>23</Hsp_hit-from>
621
- <Hsp_hit-to>529</Hsp_hit-to>
622
- <Hsp_query-frame>0</Hsp_query-frame>
623
- <Hsp_hit-frame>2</Hsp_hit-frame>
624
- <Hsp_identity>169</Hsp_identity>
625
- <Hsp_positive>169</Hsp_positive>
626
- <Hsp_gaps>0</Hsp_gaps>
627
- <Hsp_align-len>169</Hsp_align-len>
628
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
629
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
630
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
631
- </Hsp>
632
- </Hit_hsps>
633
- </Hit>
634
- <Hit>
635
- <Hit_num>2</Hit_num>
636
- <Hit_id>gi|54696511|gb|BT019825.1|</Hit_id>
637
- <Hit_def>Homo sapiens cytochrome c oxidase subunit IV isoform 1 mRNA, complete cds &gt;gi|61357718|gb|AY888491.1| Synthetic construct Homo sapiens clone FLH020808.01X cytochrome c oxidase subunit IV isoform 1 (COX4I1) mRNA, complete cds</Hit_def>
638
- <Hit_accession>BT019825</Hit_accession>
639
- <Hit_len>510</Hit_len>
640
- <Hit_hsps>
641
- <Hsp>
642
- <Hsp_num>1</Hsp_num>
643
- <Hsp_bit-score>350.903</Hsp_bit-score>
644
- <Hsp_score>899</Hsp_score>
645
- <Hsp_evalue>2.17845e-120</Hsp_evalue>
646
- <Hsp_query-from>1</Hsp_query-from>
647
- <Hsp_query-to>169</Hsp_query-to>
648
- <Hsp_hit-from>1</Hsp_hit-from>
649
- <Hsp_hit-to>507</Hsp_hit-to>
650
- <Hsp_query-frame>0</Hsp_query-frame>
651
- <Hsp_hit-frame>1</Hsp_hit-frame>
652
- <Hsp_identity>169</Hsp_identity>
653
- <Hsp_positive>169</Hsp_positive>
654
- <Hsp_gaps>0</Hsp_gaps>
655
- <Hsp_align-len>169</Hsp_align-len>
656
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
657
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
658
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
659
- </Hsp>
660
- </Hit_hsps>
661
- </Hit>
662
- <Hit>
663
- <Hit_num>3</Hit_num>
664
- <Hit_id>gi|123999898|gb|DQ896459.2|</Hit_id>
665
- <Hit_def>Synthetic construct Homo sapiens clone IMAGE:100010919; FLH194508.01L; RZPDo839C0270D cytochrome c oxidase subunit IV isoform 1 (COX4I1) gene, encodes complete protein</Hit_def>
666
- <Hit_accession>DQ896459</Hit_accession>
667
- <Hit_len>550</Hit_len>
668
- <Hit_hsps>
669
- <Hsp>
670
- <Hsp_num>1</Hsp_num>
671
- <Hsp_bit-score>350.903</Hsp_bit-score>
672
- <Hsp_score>899</Hsp_score>
673
- <Hsp_evalue>3.30446e-120</Hsp_evalue>
674
- <Hsp_query-from>1</Hsp_query-from>
675
- <Hsp_query-to>169</Hsp_query-to>
676
- <Hsp_hit-from>23</Hsp_hit-from>
677
- <Hsp_hit-to>529</Hsp_hit-to>
678
- <Hsp_query-frame>0</Hsp_query-frame>
679
- <Hsp_hit-frame>2</Hsp_hit-frame>
680
- <Hsp_identity>169</Hsp_identity>
681
- <Hsp_positive>169</Hsp_positive>
682
- <Hsp_gaps>0</Hsp_gaps>
683
- <Hsp_align-len>169</Hsp_align-len>
684
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
685
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
686
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
687
- </Hsp>
688
- </Hit_hsps>
689
- </Hit>
690
- <Hit>
691
- <Hit_num>4</Hit_num>
692
- <Hit_id>gi|164697580|dbj|AK311847.1|</Hit_id>
693
- <Hit_def>Homo sapiens cDNA, FLJ92112, Homo sapiens cytochrome c oxidase subunit IV isoform 1 (COX4I1),mRNA</Hit_def>
694
- <Hit_accession>AK311847</Hit_accession>
695
- <Hit_len>569</Hit_len>
696
- <Hit_hsps>
697
- <Hsp>
698
- <Hsp_num>1</Hsp_num>
699
- <Hsp_bit-score>350.903</Hsp_bit-score>
700
- <Hsp_score>899</Hsp_score>
701
- <Hsp_evalue>4.20272e-120</Hsp_evalue>
702
- <Hsp_query-from>1</Hsp_query-from>
703
- <Hsp_query-to>169</Hsp_query-to>
704
- <Hsp_hit-from>60</Hsp_hit-from>
705
- <Hsp_hit-to>566</Hsp_hit-to>
706
- <Hsp_query-frame>0</Hsp_query-frame>
707
- <Hsp_hit-frame>3</Hsp_hit-frame>
708
- <Hsp_identity>169</Hsp_identity>
709
- <Hsp_positive>169</Hsp_positive>
710
- <Hsp_gaps>0</Hsp_gaps>
711
- <Hsp_align-len>169</Hsp_align-len>
712
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
713
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
714
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
715
- </Hsp>
716
- </Hit_hsps>
717
- </Hit>
718
- <Hit>
719
- <Hit_num>5</Hit_num>
720
- <Hit_id>gi|649099305|gb|KJ890955.1|</Hit_id>
721
- <Hit_def>Synthetic construct Homo sapiens clone ccsbBroadEn_00349 COX4I1 gene, encodes complete protein</Hit_def>
722
- <Hit_accession>KJ890955</Hit_accession>
723
- <Hit_len>639</Hit_len>
724
- <Hit_hsps>
725
- <Hsp>
726
- <Hsp_num>1</Hsp_num>
727
- <Hsp_bit-score>351.288</Hsp_bit-score>
728
- <Hsp_score>900</Hsp_score>
729
- <Hsp_evalue>5.06135e-120</Hsp_evalue>
730
- <Hsp_query-from>1</Hsp_query-from>
731
- <Hsp_query-to>169</Hsp_query-to>
732
- <Hsp_hit-from>66</Hsp_hit-from>
733
- <Hsp_hit-to>572</Hsp_hit-to>
734
- <Hsp_query-frame>0</Hsp_query-frame>
735
- <Hsp_hit-frame>3</Hsp_hit-frame>
736
- <Hsp_identity>169</Hsp_identity>
737
- <Hsp_positive>169</Hsp_positive>
738
- <Hsp_gaps>0</Hsp_gaps>
739
- <Hsp_align-len>169</Hsp_align-len>
740
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
741
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
742
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
743
- </Hsp>
744
- </Hit_hsps>
745
- </Hit>
746
- <Hit>
747
- <Hit_num>6</Hit_num>
748
- <Hit_id>gi|180934|gb|M34600.1|HUMCOX4AA</Hit_id>
749
- <Hit_def>Human cytochrome c oxidase subunit IV (COX4) mRNA, complete cds</Hit_def>
750
- <Hit_accession>M34600</Hit_accession>
751
- <Hit_len>634</Hit_len>
752
- <Hit_hsps>
753
- <Hsp>
754
- <Hsp_num>1</Hsp_num>
755
- <Hsp_bit-score>350.903</Hsp_bit-score>
756
- <Hsp_score>899</Hsp_score>
757
- <Hsp_evalue>8.99894e-120</Hsp_evalue>
758
- <Hsp_query-from>1</Hsp_query-from>
759
- <Hsp_query-to>169</Hsp_query-to>
760
- <Hsp_hit-from>1</Hsp_hit-from>
761
- <Hsp_hit-to>507</Hsp_hit-to>
762
- <Hsp_query-frame>0</Hsp_query-frame>
763
- <Hsp_hit-frame>1</Hsp_hit-frame>
764
- <Hsp_identity>169</Hsp_identity>
765
- <Hsp_positive>169</Hsp_positive>
766
- <Hsp_gaps>0</Hsp_gaps>
767
- <Hsp_align-len>169</Hsp_align-len>
768
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
769
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
770
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
771
- </Hsp>
772
- </Hit_hsps>
773
- </Hit>
774
- <Hit>
775
- <Hit_num>7</Hit_num>
776
- <Hit_id>gi|1311702|gb|M21575.1|HUMCOX4A</Hit_id>
777
- <Hit_def>Human cytochrome c oxidase COX subunit IV (COX IV) mRNA, complete cds</Hit_def>
778
- <Hit_accession>M21575</Hit_accession>
779
- <Hit_len>669</Hit_len>
780
- <Hit_hsps>
781
- <Hsp>
782
- <Hsp_num>1</Hsp_num>
783
- <Hsp_bit-score>350.903</Hsp_bit-score>
784
- <Hsp_score>899</Hsp_score>
785
- <Hsp_evalue>1.13134e-119</Hsp_evalue>
786
- <Hsp_query-from>1</Hsp_query-from>
787
- <Hsp_query-to>169</Hsp_query-to>
788
- <Hsp_hit-from>35</Hsp_hit-from>
789
- <Hsp_hit-to>541</Hsp_hit-to>
790
- <Hsp_query-frame>0</Hsp_query-frame>
791
- <Hsp_hit-frame>2</Hsp_hit-frame>
792
- <Hsp_identity>169</Hsp_identity>
793
- <Hsp_positive>169</Hsp_positive>
794
- <Hsp_gaps>0</Hsp_gaps>
795
- <Hsp_align-len>169</Hsp_align-len>
796
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
797
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
798
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
799
- </Hsp>
800
- </Hit_hsps>
801
- </Hit>
802
- <Hit>
803
- <Hit_num>8</Hit_num>
804
- <Hit_id>gi|353681772|ref|NM_001251915.1|</Hit_id>
805
- <Hit_def>Pan troglodytes cytochrome c oxidase subunit 4I1 (COX4I1), mRNA</Hit_def>
806
- <Hit_accession>NM_001251915</Hit_accession>
807
- <Hit_len>671</Hit_len>
808
- <Hit_hsps>
809
- <Hsp>
810
- <Hsp_num>1</Hsp_num>
811
- <Hsp_bit-score>350.903</Hsp_bit-score>
812
- <Hsp_score>899</Hsp_score>
813
- <Hsp_evalue>1.36221e-119</Hsp_evalue>
814
- <Hsp_query-from>1</Hsp_query-from>
815
- <Hsp_query-to>169</Hsp_query-to>
816
- <Hsp_hit-from>64</Hsp_hit-from>
817
- <Hsp_hit-to>570</Hsp_hit-to>
818
- <Hsp_query-frame>0</Hsp_query-frame>
819
- <Hsp_hit-frame>1</Hsp_hit-frame>
820
- <Hsp_identity>169</Hsp_identity>
821
- <Hsp_positive>169</Hsp_positive>
822
- <Hsp_gaps>0</Hsp_gaps>
823
- <Hsp_align-len>169</Hsp_align-len>
824
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
825
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
826
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
827
- </Hsp>
828
- </Hit_hsps>
829
- </Hit>
830
- <Hit>
831
- <Hit_num>9</Hit_num>
832
- <Hit_id>gi|675760952|ref|XM_003820846.2|</Hit_id>
833
- <Hit_def>PREDICTED: Pan paniscus cytochrome c oxidase subunit 4 isoform 1, mitochondrial (LOC100969890), transcript variant X2, mRNA</Hit_def>
834
- <Hit_accession>XM_003820846</Hit_accession>
835
- <Hit_len>649</Hit_len>
836
- <Hit_hsps>
837
- <Hsp>
838
- <Hsp_num>1</Hsp_num>
839
- <Hsp_bit-score>350.517</Hsp_bit-score>
840
- <Hsp_score>898</Hsp_score>
841
- <Hsp_evalue>1.39036e-119</Hsp_evalue>
842
- <Hsp_query-from>1</Hsp_query-from>
843
- <Hsp_query-to>169</Hsp_query-to>
844
- <Hsp_hit-from>12</Hsp_hit-from>
845
- <Hsp_hit-to>518</Hsp_hit-to>
846
- <Hsp_query-frame>0</Hsp_query-frame>
847
- <Hsp_hit-frame>3</Hsp_hit-frame>
848
- <Hsp_identity>169</Hsp_identity>
849
- <Hsp_positive>169</Hsp_positive>
850
- <Hsp_gaps>0</Hsp_gaps>
851
- <Hsp_align-len>169</Hsp_align-len>
852
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
853
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
854
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
855
- </Hsp>
856
- </Hit_hsps>
857
- </Hit>
858
- <Hit>
859
- <Hit_num>10</Hit_num>
860
- <Hit_id>gi|517251|emb|X54802.1|</Hit_id>
861
- <Hit_def>Human mRNA for cytochrome c oxidase subunit IV (EC 1.9.3.1)</Hit_def>
862
- <Hit_accession>X54802</Hit_accession>
863
- <Hit_len>696</Hit_len>
864
- <Hit_hsps>
865
- <Hsp>
866
- <Hsp_num>1</Hsp_num>
867
- <Hsp_bit-score>350.903</Hsp_bit-score>
868
- <Hsp_score>899</Hsp_score>
869
- <Hsp_evalue>1.85788e-119</Hsp_evalue>
870
- <Hsp_query-from>1</Hsp_query-from>
871
- <Hsp_query-to>169</Hsp_query-to>
872
- <Hsp_hit-from>63</Hsp_hit-from>
873
- <Hsp_hit-to>569</Hsp_hit-to>
874
- <Hsp_query-frame>0</Hsp_query-frame>
875
- <Hsp_hit-frame>3</Hsp_hit-frame>
876
- <Hsp_identity>169</Hsp_identity>
877
- <Hsp_positive>169</Hsp_positive>
878
- <Hsp_gaps>0</Hsp_gaps>
879
- <Hsp_align-len>169</Hsp_align-len>
880
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
881
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
882
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
883
- </Hsp>
884
- </Hit_hsps>
885
- </Hit>
886
- <Hit>
887
- <Hit_num>11</Hit_num>
888
- <Hit_id>gi|39645193|gb|BC021236.2|</Hit_id>
889
- <Hit_def>Homo sapiens cytochrome c oxidase subunit IV isoform 1, mRNA (cDNA clone MGC:15331 IMAGE:4309698), complete cds</Hit_def>
890
- <Hit_accession>BC021236</Hit_accession>
891
- <Hit_len>717</Hit_len>
892
- <Hit_hsps>
893
- <Hsp>
894
- <Hsp_num>1</Hsp_num>
895
- <Hsp_bit-score>350.903</Hsp_bit-score>
896
- <Hsp_score>899</Hsp_score>
897
- <Hsp_evalue>2.36399e-119</Hsp_evalue>
898
- <Hsp_query-from>1</Hsp_query-from>
899
- <Hsp_query-to>169</Hsp_query-to>
900
- <Hsp_hit-from>39</Hsp_hit-from>
901
- <Hsp_hit-to>545</Hsp_hit-to>
902
- <Hsp_query-frame>0</Hsp_query-frame>
903
- <Hsp_hit-frame>3</Hsp_hit-frame>
904
- <Hsp_identity>169</Hsp_identity>
905
- <Hsp_positive>169</Hsp_positive>
906
- <Hsp_gaps>0</Hsp_gaps>
907
- <Hsp_align-len>169</Hsp_align-len>
908
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
909
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
910
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
911
- </Hsp>
912
- </Hit_hsps>
913
- </Hit>
914
- <Hit>
915
- <Hit_num>12</Hit_num>
916
- <Hit_id>gi|14250513|gb|BC008704.1|</Hit_id>
917
- <Hit_def>Homo sapiens cytochrome c oxidase subunit IV isoform 1, mRNA (cDNA clone MGC:15503 IMAGE:2990066), complete cds</Hit_def>
918
- <Hit_accession>BC008704</Hit_accession>
919
- <Hit_len>718</Hit_len>
920
- <Hit_hsps>
921
- <Hsp>
922
- <Hsp_num>1</Hsp_num>
923
- <Hsp_bit-score>350.903</Hsp_bit-score>
924
- <Hsp_score>899</Hsp_score>
925
- <Hsp_evalue>2.36399e-119</Hsp_evalue>
926
- <Hsp_query-from>1</Hsp_query-from>
927
- <Hsp_query-to>169</Hsp_query-to>
928
- <Hsp_hit-from>46</Hsp_hit-from>
929
- <Hsp_hit-to>552</Hsp_hit-to>
930
- <Hsp_query-frame>0</Hsp_query-frame>
931
- <Hsp_hit-frame>1</Hsp_hit-frame>
932
- <Hsp_identity>169</Hsp_identity>
933
- <Hsp_positive>169</Hsp_positive>
934
- <Hsp_gaps>0</Hsp_gaps>
935
- <Hsp_align-len>169</Hsp_align-len>
936
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
937
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
938
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
939
- </Hsp>
940
- </Hit_hsps>
941
- </Hit>
942
- <Hit>
943
- <Hit_num>13</Hit_num>
944
- <Hit_id>gi|1913895|gb|U90915.1|HSU90915</Hit_id>
945
- <Hit_def>Human clone 23600 cytochrome c oxidase subunit IV mRNA, complete cds</Hit_def>
946
- <Hit_accession>U90915</Hit_accession>
947
- <Hit_len>722</Hit_len>
948
- <Hit_hsps>
949
- <Hsp>
950
- <Hsp_num>1</Hsp_num>
951
- <Hsp_bit-score>350.903</Hsp_bit-score>
952
- <Hsp_score>899</Hsp_score>
953
- <Hsp_evalue>2.44668e-119</Hsp_evalue>
954
- <Hsp_query-from>1</Hsp_query-from>
955
- <Hsp_query-to>169</Hsp_query-to>
956
- <Hsp_hit-from>71</Hsp_hit-from>
957
- <Hsp_hit-to>577</Hsp_hit-to>
958
- <Hsp_query-frame>0</Hsp_query-frame>
959
- <Hsp_hit-frame>2</Hsp_hit-frame>
960
- <Hsp_identity>169</Hsp_identity>
961
- <Hsp_positive>169</Hsp_positive>
962
- <Hsp_gaps>0</Hsp_gaps>
963
- <Hsp_align-len>169</Hsp_align-len>
964
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
965
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
966
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
967
- </Hsp>
968
- </Hit_hsps>
969
- </Hit>
970
- <Hit>
971
- <Hit_num>14</Hit_num>
972
- <Hit_id>gi|974005291|ref|NM_001861.4|</Hit_id>
973
- <Hit_def>Homo sapiens cytochrome c oxidase subunit 4I1 (COX4I1), transcript variant 1, mRNA</Hit_def>
974
- <Hit_accession>NM_001861</Hit_accession>
975
- <Hit_len>832</Hit_len>
976
- <Hit_hsps>
977
- <Hsp>
978
- <Hsp_num>1</Hsp_num>
979
- <Hsp_bit-score>350.903</Hsp_bit-score>
980
- <Hsp_score>899</Hsp_score>
981
- <Hsp_evalue>8.66354e-119</Hsp_evalue>
982
- <Hsp_query-from>1</Hsp_query-from>
983
- <Hsp_query-to>169</Hsp_query-to>
984
- <Hsp_hit-from>188</Hsp_hit-from>
985
- <Hsp_hit-to>694</Hsp_hit-to>
986
- <Hsp_query-frame>0</Hsp_query-frame>
987
- <Hsp_hit-frame>2</Hsp_hit-frame>
988
- <Hsp_identity>169</Hsp_identity>
989
- <Hsp_positive>169</Hsp_positive>
990
- <Hsp_gaps>0</Hsp_gaps>
991
- <Hsp_align-len>169</Hsp_align-len>
992
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
993
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
994
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
995
- </Hsp>
996
- </Hit_hsps>
997
- </Hit>
998
- <Hit>
999
- <Hit_num>15</Hit_num>
1000
- <Hit_id>gi|38382822|gb|BC062437.1|</Hit_id>
1001
- <Hit_def>Homo sapiens cytochrome c oxidase subunit IV isoform 1, mRNA (cDNA clone MGC:72016 IMAGE:6451700), complete cds</Hit_def>
1002
- <Hit_accession>BC062437</Hit_accession>
1003
- <Hit_len>730</Hit_len>
1004
- <Hit_hsps>
1005
- <Hsp>
1006
- <Hsp_num>1</Hsp_num>
1007
- <Hsp_bit-score>349.362</Hsp_bit-score>
1008
- <Hsp_score>895</Hsp_score>
1009
- <Hsp_evalue>9.31575e-119</Hsp_evalue>
1010
- <Hsp_query-from>1</Hsp_query-from>
1011
- <Hsp_query-to>169</Hsp_query-to>
1012
- <Hsp_hit-from>67</Hsp_hit-from>
1013
- <Hsp_hit-to>573</Hsp_hit-to>
1014
- <Hsp_query-frame>0</Hsp_query-frame>
1015
- <Hsp_hit-frame>1</Hsp_hit-frame>
1016
- <Hsp_identity>168</Hsp_identity>
1017
- <Hsp_positive>168</Hsp_positive>
1018
- <Hsp_gaps>0</Hsp_gaps>
1019
- <Hsp_align-len>169</Hsp_align-len>
1020
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
1021
- <Hsp_hseq>MLTTRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
1022
- <Hsp_midline>ML TRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
1023
- </Hsp>
1024
- </Hit_hsps>
1025
- </Hit>
1026
- <Hit>
1027
- <Hit_num>16</Hit_num>
1028
- <Hit_id>gi|1370467948|ref|XM_024450156.1|</Hit_id>
1029
- <Hit_def>PREDICTED: Homo sapiens cytochrome c oxidase subunit 4I1 (COX4I1), transcript variant X1, mRNA</Hit_def>
1030
- <Hit_accession>XM_024450156</Hit_accession>
1031
- <Hit_len>764</Hit_len>
1032
- <Hit_hsps>
1033
- <Hsp>
1034
- <Hsp_num>1</Hsp_num>
1035
- <Hsp_bit-score>349.747</Hsp_bit-score>
1036
- <Hsp_score>896</Hsp_score>
1037
- <Hsp_evalue>1.07981e-118</Hsp_evalue>
1038
- <Hsp_query-from>1</Hsp_query-from>
1039
- <Hsp_query-to>169</Hsp_query-to>
1040
- <Hsp_hit-from>127</Hsp_hit-from>
1041
- <Hsp_hit-to>633</Hsp_hit-to>
1042
- <Hsp_query-frame>0</Hsp_query-frame>
1043
- <Hsp_hit-frame>1</Hsp_hit-frame>
1044
- <Hsp_identity>169</Hsp_identity>
1045
- <Hsp_positive>169</Hsp_positive>
1046
- <Hsp_gaps>0</Hsp_gaps>
1047
- <Hsp_align-len>169</Hsp_align-len>
1048
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
1049
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
1050
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
1051
- </Hsp>
1052
- </Hit_hsps>
1053
- </Hit>
1054
- <Hit>
1055
- <Hit_num>17</Hit_num>
1056
- <Hit_id>gi|974005292|ref|NM_001318786.1|</Hit_id>
1057
- <Hit_def>Homo sapiens cytochrome c oxidase subunit 4I1 (COX4I1), transcript variant 2, mRNA</Hit_def>
1058
- <Hit_accession>NM_001318786</Hit_accession>
1059
- <Hit_len>853</Hit_len>
1060
- <Hit_hsps>
1061
- <Hsp>
1062
- <Hsp_num>1</Hsp_num>
1063
- <Hsp_bit-score>350.903</Hsp_bit-score>
1064
- <Hsp_score>899</Hsp_score>
1065
- <Hsp_evalue>1.09834e-118</Hsp_evalue>
1066
- <Hsp_query-from>1</Hsp_query-from>
1067
- <Hsp_query-to>169</Hsp_query-to>
1068
- <Hsp_hit-from>209</Hsp_hit-from>
1069
- <Hsp_hit-to>715</Hsp_hit-to>
1070
- <Hsp_query-frame>0</Hsp_query-frame>
1071
- <Hsp_hit-frame>2</Hsp_hit-frame>
1072
- <Hsp_identity>169</Hsp_identity>
1073
- <Hsp_positive>169</Hsp_positive>
1074
- <Hsp_gaps>0</Hsp_gaps>
1075
- <Hsp_align-len>169</Hsp_align-len>
1076
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
1077
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
1078
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
1079
- </Hsp>
1080
- </Hit_hsps>
1081
- </Hit>
1082
- <Hit>
1083
- <Hit_num>18</Hit_num>
1084
- <Hit_id>gi|1367187339|ref|XM_009431356.3|</Hit_id>
1085
- <Hit_def>PREDICTED: Pan troglodytes cytochrome c oxidase subunit 4I1 (COX4I1), transcript variant X1, mRNA</Hit_def>
1086
- <Hit_accession>XM_009431356</Hit_accession>
1087
- <Hit_len>765</Hit_len>
1088
- <Hit_hsps>
1089
- <Hsp>
1090
- <Hsp_num>1</Hsp_num>
1091
- <Hsp_bit-score>349.747</Hsp_bit-score>
1092
- <Hsp_score>896</Hsp_score>
1093
- <Hsp_evalue>1.11739e-118</Hsp_evalue>
1094
- <Hsp_query-from>1</Hsp_query-from>
1095
- <Hsp_query-to>169</Hsp_query-to>
1096
- <Hsp_hit-from>128</Hsp_hit-from>
1097
- <Hsp_hit-to>634</Hsp_hit-to>
1098
- <Hsp_query-frame>0</Hsp_query-frame>
1099
- <Hsp_hit-frame>2</Hsp_hit-frame>
1100
- <Hsp_identity>169</Hsp_identity>
1101
- <Hsp_positive>169</Hsp_positive>
1102
- <Hsp_gaps>0</Hsp_gaps>
1103
- <Hsp_align-len>169</Hsp_align-len>
1104
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
1105
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
1106
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
1107
- </Hsp>
1108
- </Hit_hsps>
1109
- </Hit>
1110
- <Hit>
1111
- <Hit_num>19</Hit_num>
1112
- <Hit_id>gi|931598471|ref|XM_003820848.3|</Hit_id>
1113
- <Hit_def>PREDICTED: Pan paniscus cytochrome c oxidase subunit 4 isoform 1, mitochondrial (LOC100969890), transcript variant X1, mRNA</Hit_def>
1114
- <Hit_accession>XM_003820848</Hit_accession>
1115
- <Hit_len>765</Hit_len>
1116
- <Hit_hsps>
1117
- <Hsp>
1118
- <Hsp_num>1</Hsp_num>
1119
- <Hsp_bit-score>349.747</Hsp_bit-score>
1120
- <Hsp_score>896</Hsp_score>
1121
- <Hsp_evalue>1.15459e-118</Hsp_evalue>
1122
- <Hsp_query-from>1</Hsp_query-from>
1123
- <Hsp_query-to>169</Hsp_query-to>
1124
- <Hsp_hit-from>128</Hsp_hit-from>
1125
- <Hsp_hit-to>634</Hsp_hit-to>
1126
- <Hsp_query-frame>0</Hsp_query-frame>
1127
- <Hsp_hit-frame>2</Hsp_hit-frame>
1128
- <Hsp_identity>169</Hsp_identity>
1129
- <Hsp_positive>169</Hsp_positive>
1130
- <Hsp_gaps>0</Hsp_gaps>
1131
- <Hsp_align-len>169</Hsp_align-len>
1132
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
1133
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
1134
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
1135
- </Hsp>
1136
- </Hit_hsps>
1137
- </Hit>
1138
- <Hit>
1139
- <Hit_num>20</Hit_num>
1140
- <Hit_id>gi|1099162126|ref|XM_004058096.2|</Hit_id>
1141
- <Hit_def>PREDICTED: Gorilla gorilla gorilla cytochrome c oxidase subunit 4 isoform 1, mitochondrial (LOC101151536), mRNA</Hit_def>
1142
- <Hit_accession>XM_004058096</Hit_accession>
1143
- <Hit_len>825</Hit_len>
1144
- <Hit_hsps>
1145
- <Hsp>
1146
- <Hsp_num>1</Hsp_num>
1147
- <Hsp_bit-score>348.591</Hsp_bit-score>
1148
- <Hsp_score>893</Hsp_score>
1149
- <Hsp_evalue>4.74138e-118</Hsp_evalue>
1150
- <Hsp_query-from>1</Hsp_query-from>
1151
- <Hsp_query-to>169</Hsp_query-to>
1152
- <Hsp_hit-from>188</Hsp_hit-from>
1153
- <Hsp_hit-to>694</Hsp_hit-to>
1154
- <Hsp_query-frame>0</Hsp_query-frame>
1155
- <Hsp_hit-frame>2</Hsp_hit-frame>
1156
- <Hsp_identity>168</Hsp_identity>
1157
- <Hsp_positive>169</Hsp_positive>
1158
- <Hsp_gaps>0</Hsp_gaps>
1159
- <Hsp_align-len>169</Hsp_align-len>
1160
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
1161
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDYPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
1162
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRD+PLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
1163
- </Hsp>
1164
- </Hit_hsps>
1165
- </Hit>
1166
- </Iteration_hits>
1167
- <Iteration_stat>
1168
- <Statistics>
1169
- <Statistics_db-num>52085306</Statistics_db-num>
1170
- <Statistics_db-len>214274604493</Statistics_db-len>
1171
- <Statistics_hsp-len>141</Statistics_hsp-len>
1172
- <Statistics_eff-space>1794263520504</Statistics_eff-space>
1173
- <Statistics_kappa>0.041</Statistics_kappa>
1174
- <Statistics_lambda>0.267</Statistics_lambda>
1175
- <Statistics_entropy>0.14</Statistics_entropy>
1176
- </Statistics>
1177
- </Iteration_stat>
1178
- </Iteration>
1179
- </BlastOutput_iterations>
1180
- </BlastOutput>
1181
-