sequenceserver 2.0.0.rc7 → 2.0.0.rc8

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Files changed (530) hide show
  1. checksums.yaml +4 -4
  2. data/bin/chromedriver +0 -0
  3. data/bin/geckodriver +0 -0
  4. data/bin/sequenceserver +31 -4
  5. data/lib/sequenceserver.rb +6 -1
  6. data/lib/sequenceserver/database.rb +7 -42
  7. data/lib/sequenceserver/exceptions.rb +14 -0
  8. data/lib/sequenceserver/makeblastdb.rb +121 -41
  9. data/lib/sequenceserver/routes.rb +1 -1
  10. data/lib/sequenceserver/version.rb +1 -1
  11. data/public/css/sequenceserver.css +8 -2
  12. data/public/css/sequenceserver.min.css +1 -1
  13. data/public/js/jquery_world.js +1 -1
  14. data/public/js/report.js +1 -2
  15. data/public/js/search.js +40 -18
  16. data/public/js/sidebar.js +50 -26
  17. data/public/sequenceserver-report.min.js +17 -17
  18. data/public/sequenceserver-search.min.js +2 -2
  19. data/views/layout.erb +1 -1
  20. data/views/report.erb +1 -1
  21. data/views/search.erb +1 -1
  22. metadata +4 -510
  23. data/.bootstrap/config.json +0 -433
  24. data/.codeclimate.yml +0 -31
  25. data/.csslintrc +0 -2
  26. data/.dockerignore +0 -1
  27. data/.eslintignore +0 -1
  28. data/.eslintrc.json +0 -36
  29. data/.gitignore +0 -56
  30. data/.mailmap +0 -5
  31. data/.rspec +0 -3
  32. data/.rubocop.yml +0 -61
  33. data/.travis.yml +0 -74
  34. data/AppImage/recipe.yml +0 -15
  35. data/AppImage/sequenceserver.desktop +0 -8
  36. data/AppImage/sequenceserver.png +0 -0
  37. data/AppImage/sequenceserver.sh +0 -16
  38. data/Dockerfile +0 -25
  39. data/LICENSE.txt +0 -661
  40. data/LICENSE/Apache.txt +0 -176
  41. data/LICENSE/d3.txt +0 -26
  42. data/README.md +0 -161
  43. data/package.json +0 -48
  44. data/public/vendor/.dependencies.json +0 -18
  45. data/public/vendor/.loaderversions +0 -1
  46. data/public/vendor/github/components/jquery@2.1.4/.gitignore +0 -1
  47. data/public/vendor/github/components/jquery@2.1.4/.jspm-hash +0 -1
  48. data/public/vendor/github/components/jquery@2.1.4/.jspm.json +0 -37
  49. data/public/vendor/github/components/jqueryui@1.11.4/.gitignore +0 -4
  50. data/public/vendor/github/components/jqueryui@1.11.4/.jspm-hash +0 -1
  51. data/public/vendor/github/components/jqueryui@1.11.4/.jspm.json +0 -136
  52. data/public/vendor/github/components/jqueryui@1.11.4/ui/.jshintrc +0 -24
  53. data/public/vendor/github/jspm/nodelibs-buffer@0.1.0/.jspm-hash +0 -1
  54. data/public/vendor/github/jspm/nodelibs-buffer@0.1.0/.jspm.json +0 -10
  55. data/public/vendor/github/jspm/nodelibs-events@0.1.1/.jspm-hash +0 -1
  56. data/public/vendor/github/jspm/nodelibs-events@0.1.1/.jspm.json +0 -10
  57. data/public/vendor/github/jspm/nodelibs-fs@0.1.2/.jspm-hash +0 -1
  58. data/public/vendor/github/jspm/nodelibs-module@0.1.0/.jspm-hash +0 -1
  59. data/public/vendor/github/jspm/nodelibs-module@0.1.0/.jspm.json +0 -3
  60. data/public/vendor/github/jspm/nodelibs-path@0.1.0/.jspm-hash +0 -1
  61. data/public/vendor/github/jspm/nodelibs-path@0.1.0/.jspm.json +0 -10
  62. data/public/vendor/github/jspm/nodelibs-process@0.1.1/.jspm-hash +0 -1
  63. data/public/vendor/github/jspm/nodelibs-stream@0.1.0/.jspm-hash +0 -1
  64. data/public/vendor/github/jspm/nodelibs-stream@0.1.0/.jspm.json +0 -10
  65. data/public/vendor/github/jspm/nodelibs-util@0.1.0/.jspm-hash +0 -1
  66. data/public/vendor/github/jspm/nodelibs-util@0.1.0/.jspm.json +0 -10
  67. data/public/vendor/github/mbostock/d3@3.5.6/.jspm-hash +0 -1
  68. data/public/vendor/github/mbostock/d3@3.5.6/.jspm.json +0 -76
  69. data/public/vendor/github/nicgirault/circosJs@1.7.0/.gitignore +0 -10
  70. data/public/vendor/github/nicgirault/circosJs@1.7.0/.jspm-hash +0 -1
  71. data/public/vendor/github/systemjs/plugin-css@0.1.15/.gitignore +0 -1
  72. data/public/vendor/github/systemjs/plugin-css@0.1.15/.jspm-hash +0 -1
  73. data/public/vendor/github/systemjs/plugin-css@0.1.15/.jspm.json +0 -4
  74. data/public/vendor/github/systemjs/plugin-json@0.1.0/.jspm-hash +0 -1
  75. data/public/vendor/github/twbs/bootstrap@3.3.5/.jspm-hash +0 -1
  76. data/public/vendor/github/twbs/bootstrap@3.3.5/.jspm.json +0 -100
  77. data/public/vendor/npm/amdefine@1.0.0/.jspm-hash +0 -1
  78. data/public/vendor/npm/amdefine@1.0.0/.jspm.json +0 -55
  79. data/public/vendor/npm/babel-core@5.8.23/.jspm-hash +0 -1
  80. data/public/vendor/npm/babel-runtime@5.8.20/.jspm-hash +0 -1
  81. data/public/vendor/npm/babel-runtime@5.8.20/.npmignore +0 -2
  82. data/public/vendor/npm/base62@0.1.1/.jspm-hash +0 -1
  83. data/public/vendor/npm/base62@0.1.1/.jspm.json +0 -49
  84. data/public/vendor/npm/base62@0.1.1/.travis.yml +0 -4
  85. data/public/vendor/npm/base64-js@0.0.8/.jspm-hash +0 -1
  86. data/public/vendor/npm/base64-js@0.0.8/.jspm.json +0 -77
  87. data/public/vendor/npm/base64-js@0.0.8/.travis.yml +0 -5
  88. data/public/vendor/npm/buffer@3.4.3/.jspm-hash +0 -1
  89. data/public/vendor/npm/buffer@3.4.3/.jspm.json +0 -105
  90. data/public/vendor/npm/buffer@3.4.3/.npmignore +0 -1
  91. data/public/vendor/npm/buffer@3.4.3/.travis.yml +0 -8
  92. data/public/vendor/npm/buffer@3.4.3/.zuul.yml +0 -20
  93. data/public/vendor/npm/core-js@1.1.2/.eslintrc +0 -36
  94. data/public/vendor/npm/core-js@1.1.2/.gitattributes +0 -1
  95. data/public/vendor/npm/core-js@1.1.2/.jspm-hash +0 -1
  96. data/public/vendor/npm/core-js@1.1.2/.npmignore +0 -10
  97. data/public/vendor/npm/core-js@1.1.2/.travis.yml +0 -3
  98. data/public/vendor/npm/core-util-is@1.0.1/.jspm-hash +0 -1
  99. data/public/vendor/npm/core-util-is@1.0.1/.jspm.json +0 -58
  100. data/public/vendor/npm/envify@3.4.0/.jspm-hash +0 -1
  101. data/public/vendor/npm/envify@3.4.0/.jspm.json +0 -72
  102. data/public/vendor/npm/envify@3.4.0/.npmignore +0 -2
  103. data/public/vendor/npm/esprima-fb@13001.1001.0-dev-harmony-fb/.jspm-hash +0 -1
  104. data/public/vendor/npm/esprima-fb@13001.1001.0-dev-harmony-fb/.jspm.json +0 -102
  105. data/public/vendor/npm/events@1.0.2/.jspm-hash +0 -1
  106. data/public/vendor/npm/events@1.0.2/.jspm.json +0 -67
  107. data/public/vendor/npm/events@1.0.2/.npmignore +0 -1
  108. data/public/vendor/npm/events@1.0.2/.travis.yml +0 -7
  109. data/public/vendor/npm/events@1.0.2/.zuul.yml +0 -12
  110. data/public/vendor/npm/font-awesome@4.4.0/.jspm-hash +0 -1
  111. data/public/vendor/npm/font-awesome@4.4.0/.jspm.json +0 -81
  112. data/public/vendor/npm/font-awesome@4.4.0/.npmignore +0 -42
  113. data/public/vendor/npm/ieee754@1.1.6/.jspm-hash +0 -1
  114. data/public/vendor/npm/ieee754@1.1.6/.jspm.json +0 -70
  115. data/public/vendor/npm/ieee754@1.1.6/.travis.yml +0 -7
  116. data/public/vendor/npm/ieee754@1.1.6/.zuul.yml +0 -20
  117. data/public/vendor/npm/inherits@2.0.1/.jspm-hash +0 -1
  118. data/public/vendor/npm/inherits@2.0.1/.jspm.json +0 -60
  119. data/public/vendor/npm/is-array@1.0.1/.jepso-ci.json +0 -3
  120. data/public/vendor/npm/is-array@1.0.1/.jspm-hash +0 -1
  121. data/public/vendor/npm/is-array@1.0.1/.jspm.json +0 -42
  122. data/public/vendor/npm/is-array@1.0.1/.npmignore +0 -0
  123. data/public/vendor/npm/isarray@0.0.1/.jspm-hash +0 -1
  124. data/public/vendor/npm/isarray@0.0.1/.jspm.json +0 -51
  125. data/public/vendor/npm/jstransform@10.1.0/.jshintrc +0 -28
  126. data/public/vendor/npm/jstransform@10.1.0/.jspm-hash +0 -1
  127. data/public/vendor/npm/jstransform@10.1.0/.jspm.json +0 -95
  128. data/public/vendor/npm/jstransform@10.1.0/.npmignore +0 -4
  129. data/public/vendor/npm/jstransform@10.1.0/.travis.yml +0 -8
  130. data/public/vendor/npm/path-browserify@0.0.0/.jspm-hash +0 -1
  131. data/public/vendor/npm/path-browserify@0.0.0/.jspm.json +0 -56
  132. data/public/vendor/npm/process@0.10.1/.jspm-hash +0 -1
  133. data/public/vendor/npm/react@0.13.3/.jspm-hash +0 -1
  134. data/public/vendor/npm/react@0.13.3/.jspm.json +0 -77
  135. data/public/vendor/npm/readable-stream@1.1.13/.jspm-hash +0 -1
  136. data/public/vendor/npm/readable-stream@1.1.13/.jspm.json +0 -95
  137. data/public/vendor/npm/readable-stream@1.1.13/.npmignore +0 -5
  138. data/public/vendor/npm/source-map@0.1.31/.jspm-hash +0 -1
  139. data/public/vendor/npm/source-map@0.1.31/.jspm.json +0 -133
  140. data/public/vendor/npm/source-map@0.1.31/.npmignore +0 -2
  141. data/public/vendor/npm/source-map@0.1.31/.travis.yml +0 -4
  142. data/public/vendor/npm/stream-browserify@1.0.0/.jspm-hash +0 -1
  143. data/public/vendor/npm/stream-browserify@1.0.0/.jspm.json +0 -77
  144. data/public/vendor/npm/stream-browserify@1.0.0/.travis.yml +0 -4
  145. data/public/vendor/npm/string_decoder@0.10.31/.jspm-hash +0 -1
  146. data/public/vendor/npm/string_decoder@0.10.31/.jspm.json +0 -58
  147. data/public/vendor/npm/string_decoder@0.10.31/.npmignore +0 -2
  148. data/public/vendor/npm/through@2.3.8/.jspm-hash +0 -1
  149. data/public/vendor/npm/through@2.3.8/.jspm.json +0 -72
  150. data/public/vendor/npm/through@2.3.8/.travis.yml +0 -5
  151. data/public/vendor/npm/underscore@1.8.3/.jspm-hash +0 -1
  152. data/public/vendor/npm/underscore@1.8.3/.jspm.json +0 -74
  153. data/public/vendor/npm/util@0.10.3/.jspm-hash +0 -1
  154. data/public/vendor/npm/util@0.10.3/.jspm.json +0 -58
  155. data/public/vendor/npm/util@0.10.3/.npmignore +0 -1
  156. data/public/vendor/npm/util@0.10.3/.travis.yml +0 -8
  157. data/public/vendor/npm/util@0.10.3/.zuul.yml +0 -10
  158. data/public/vendor/npm/webshim@1.15.8/.gitattributes +0 -12
  159. data/public/vendor/npm/webshim@1.15.8/.jspm-hash +0 -1
  160. data/public/vendor/npm/webshim@1.15.8/.jspm.json +0 -92
  161. data/public/vendor/npm/webshim@1.15.8/.npmignore +0 -16
  162. data/public/vendor/npm/webshim@1.15.8/.project +0 -12
  163. data/public/vendor/npm/webshim@1.15.8/demos/demos/filereader/upload/.keep +0 -0
  164. data/sequenceserver.gemspec +0 -55
  165. data/spec/blast_versions/blast_2.2.30/blast_2.2.30_spec.rb +0 -228
  166. data/spec/blast_versions/blast_2.2.30/import_spec_capybara_local_2.2.30.rb +0 -583
  167. data/spec/blast_versions/blast_2.2.31/blast_2.2.31_spec.rb +0 -228
  168. data/spec/blast_versions/blast_2.2.31/import_spec_capybara_local_2.2.31.rb +0 -587
  169. data/spec/blast_versions/blast_2.3.0/blast_2.3.0_spec.rb +0 -229
  170. data/spec/blast_versions/blast_2.3.0/import_spec_capybara_local_2.3.0.rb +0 -587
  171. data/spec/blast_versions/blast_2.4.0/blast_2.4.0_spec.rb +0 -228
  172. data/spec/blast_versions/blast_2.4.0/import_spec_capybara_local_2.4.0.rb +0 -588
  173. data/spec/blast_versions/blast_2.5.0/blast_2.5.0_spec.rb +0 -228
  174. data/spec/blast_versions/blast_2.5.0/import_spec_capybara_local_2.5.0.rb +0 -587
  175. data/spec/blast_versions/blast_2.6.0/blast_2.6.0_spec.rb +0 -228
  176. data/spec/blast_versions/blast_2.6.0/import_spec_capybara_local_2.6.0.rb +0 -587
  177. data/spec/blast_versions/blast_2.7.1/blast_2.7.1_spec.rb +0 -228
  178. data/spec/blast_versions/blast_2.7.1/import_spec_capybara_local_2.7.1.rb +0 -587
  179. data/spec/blast_versions/blast_2.8.1/blast_2.8.1_spec.rb +0 -228
  180. data/spec/blast_versions/blast_2.8.1/import_spec_capybara_local_2.8.1.rb +0 -587
  181. data/spec/blast_versions/blast_2.9.0/blast_2.9.0_spec.rb +0 -228
  182. data/spec/blast_versions/blast_2.9.0/import_spec_capybara_local_2.9.0.rb +0 -585
  183. data/spec/blast_versions/diamond_0.9.24/diamond_0.9.24_spec.rb +0 -176
  184. data/spec/blast_versions/diamond_0.9.24/import_spec_capybara_local_0.9.24.rb +0 -237
  185. data/spec/capybara_spec.rb +0 -345
  186. data/spec/config_spec.rb +0 -87
  187. data/spec/database/funky_ids/funky_ids.fa +0 -16
  188. data/spec/database/funky_ids/v4/funky_ids.fa.nhd +0 -8
  189. data/spec/database/funky_ids/v4/funky_ids.fa.nhi +0 -0
  190. data/spec/database/funky_ids/v4/funky_ids.fa.nhr +0 -0
  191. data/spec/database/funky_ids/v4/funky_ids.fa.nin +0 -0
  192. data/spec/database/funky_ids/v4/funky_ids.fa.nog +0 -0
  193. data/spec/database/funky_ids/v4/funky_ids.fa.nsd +0 -15
  194. data/spec/database/funky_ids/v4/funky_ids.fa.nsi +0 -0
  195. data/spec/database/funky_ids/v4/funky_ids.fa.nsq +0 -0
  196. data/spec/database/funky_ids/v5/funky_ids.fa.ndb +0 -0
  197. data/spec/database/funky_ids/v5/funky_ids.fa.nhd +0 -8
  198. data/spec/database/funky_ids/v5/funky_ids.fa.nhi +0 -0
  199. data/spec/database/funky_ids/v5/funky_ids.fa.nhr +0 -0
  200. data/spec/database/funky_ids/v5/funky_ids.fa.nin +0 -0
  201. data/spec/database/funky_ids/v5/funky_ids.fa.nog +0 -0
  202. data/spec/database/funky_ids/v5/funky_ids.fa.nos +0 -0
  203. data/spec/database/funky_ids/v5/funky_ids.fa.not +0 -0
  204. data/spec/database/funky_ids/v5/funky_ids.fa.nsq +0 -0
  205. data/spec/database/funky_ids/v5/funky_ids.fa.ntf +0 -0
  206. data/spec/database/funky_ids/v5/funky_ids.fa.nto +0 -0
  207. data/spec/database/funky_sequences/README.md +0 -14
  208. data/spec/database/funky_sequences/funky_aa_sequences.fa +0 -7
  209. data/spec/database/funky_sequences/funky_aa_sequences.fa.phd +0 -3
  210. data/spec/database/funky_sequences/funky_aa_sequences.fa.phi +0 -0
  211. data/spec/database/funky_sequences/funky_aa_sequences.fa.phr +0 -0
  212. data/spec/database/funky_sequences/funky_aa_sequences.fa.pin +0 -0
  213. data/spec/database/funky_sequences/funky_aa_sequences.fa.pog +0 -0
  214. data/spec/database/funky_sequences/funky_aa_sequences.fa.psd +0 -6
  215. data/spec/database/funky_sequences/funky_aa_sequences.fa.psi +0 -0
  216. data/spec/database/funky_sequences/funky_aa_sequences.fa.psq +0 -0
  217. data/spec/database/funky_sequences/funky_na_sequences.fa +0 -2
  218. data/spec/database/funky_sequences/funky_na_sequences.fa.nhr +0 -0
  219. data/spec/database/funky_sequences/funky_na_sequences.fa.nin +0 -0
  220. data/spec/database/funky_sequences/funky_na_sequences.fa.nog +0 -0
  221. data/spec/database/funky_sequences/funky_na_sequences.fa.nsd +0 -2
  222. data/spec/database/funky_sequences/funky_na_sequences.fa.nsi +0 -0
  223. data/spec/database/funky_sequences/funky_na_sequences.fa.nsq +0 -0
  224. data/spec/database/ox_parse_error/query.fa +0 -1
  225. data/spec/database/ox_parse_error/rand1.fa +0 -2
  226. data/spec/database/ox_parse_error/rand1.fa.nhd +0 -1
  227. data/spec/database/ox_parse_error/rand1.fa.nhi +0 -0
  228. data/spec/database/ox_parse_error/rand1.fa.nhr +0 -0
  229. data/spec/database/ox_parse_error/rand1.fa.nin +0 -0
  230. data/spec/database/ox_parse_error/rand1.fa.nog +0 -0
  231. data/spec/database/ox_parse_error/rand1.fa.nsd +0 -2
  232. data/spec/database/ox_parse_error/rand1.fa.nsi +0 -0
  233. data/spec/database/ox_parse_error/rand1.fa.nsq +0 -0
  234. data/spec/database/ox_parse_error/rand2.fa +0 -2
  235. data/spec/database/ox_parse_error/rand2.fa.nhd +0 -1
  236. data/spec/database/ox_parse_error/rand2.fa.nhi +0 -0
  237. data/spec/database/ox_parse_error/rand2.fa.nhr +0 -0
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  240. data/spec/database/ox_parse_error/rand2.fa.nsd +0 -2
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  242. data/spec/database/ox_parse_error/rand2.fa.nsq +0 -0
  243. data/spec/database/ox_parse_error_unique_ids/query.fa +0 -1
  244. data/spec/database/ox_parse_error_unique_ids/rand1.fa +0 -2
  245. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nhd +0 -1
  246. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nhi +0 -0
  247. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nhr +0 -0
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  249. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nog +0 -0
  250. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nsd +0 -2
  251. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nsi +0 -0
  252. data/spec/database/ox_parse_error_unique_ids/rand1.fa.nsq +0 -0
  253. data/spec/database/ox_parse_error_unique_ids/rand2.fa +0 -2
  254. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nhd +0 -1
  255. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nhi +0 -0
  256. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nhr +0 -0
  257. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nin +0 -0
  258. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nog +0 -0
  259. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nsd +0 -2
  260. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nsi +0 -0
  261. data/spec/database/ox_parse_error_unique_ids/rand2.fa.nsq +0 -0
  262. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa +0 -6
  263. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nhd +0 -1
  264. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nhi +0 -0
  265. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nhr +0 -0
  266. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nin +0 -0
  267. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nog +0 -0
  268. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nsd +0 -2
  269. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nsi +0 -0
  270. data/spec/database/pipe_in_seqid/pipe_in_seqid.fa.nsq +0 -0
  271. data/spec/database/sample/genome/Solenopsis_invicta/Solenopsis_invicta_gnG_subset.fasta.ndb +0 -0
  272. data/spec/database/sample/genome/Solenopsis_invicta/Solenopsis_invicta_gnG_subset.fasta.nhd +0 -8
  273. data/spec/database/sample/genome/Solenopsis_invicta/Solenopsis_invicta_gnG_subset.fasta.nhi +0 -0
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  481. data/spec/dotdir/diamond_0.9.24/blastx/job.yaml +0 -8
  482. data/spec/dotdir/diamond_0.9.24/blastx_nohits/DIAMOND_BLASTX_NOHITS_0.9.24.xml +0 -41
  483. data/spec/dotdir/diamond_0.9.24/blastx_nohits/job.yaml +0 -8
  484. data/spec/download_helper.rb +0 -35
  485. data/spec/empty_config.yml +0 -0
  486. data/spec/makeblastdb_spec.rb +0 -121
  487. data/spec/routes_spec.rb +0 -93
  488. data/spec/sample.conf +0 -2
  489. data/spec/sequence_spec.rb +0 -99
  490. data/spec/sequences/MH011443_1_gi_1486783306_gb_MH011443_1.txt +0 -6
  491. data/spec/sequences/MH011443_1_gi_1486783307_gb_AYF55702_1.txt +0 -6
  492. data/spec/sequences/MH011443_1_gi_1528997474_gb_MH447967_1.txt +0 -30
  493. data/spec/sequences/MH011443_1_sp_P04637_P53_HUMAN.txt +0 -6
  494. data/spec/sequences/Nucleotide_TP53_COX41.fasta +0 -15
  495. data/spec/sequences/Protein_TP53_COX41.fasta +0 -12
  496. data/spec/sequences/Query_1_SI2_2_0_06267.txt +0 -6
  497. data/spec/sequences/alignment-2_hits.txt +0 -12
  498. data/spec/sequences/alignment-35_hits_diamond_blastp.txt +0 -210
  499. data/spec/sequences/alignment-35_hits_diamond_blastx.txt +0 -210
  500. data/spec/sequences/alignment-3_hits.txt +0 -18
  501. data/spec/sequences/alignment-40_hits_blastn.txt +0 -246
  502. data/spec/sequences/alignment-40_hits_blastp.txt +0 -240
  503. data/spec/sequences/alignment-40_hits_blastp_2.2.30.txt +0 -240
  504. data/spec/sequences/alignment-40_hits_blastx.txt +0 -240
  505. data/spec/sequences/alignment-40_hits_tblastn.txt +0 -240
  506. data/spec/sequences/alignment-40_hits_tblastn_2.2.30.txt +0 -240
  507. data/spec/sequences/alignment-40_hits_tblastx.txt +0 -2664
  508. data/spec/sequences/alignment-4_hits.txt +0 -24
  509. data/spec/sequences/alignment-4_hits_blastn.txt +0 -24
  510. data/spec/sequences/alignment-4_hits_blastp.txt +0 -24
  511. data/spec/sequences/alignment-4_hits_blastp_2.2.30.txt +0 -24
  512. data/spec/sequences/alignment-4_hits_blastx.txt +0 -24
  513. data/spec/sequences/alignment-4_hits_diamond_blastp.txt +0 -24
  514. data/spec/sequences/alignment-4_hits_diamond_blastx.txt +0 -24
  515. data/spec/sequences/alignment-4_hits_tblastn.txt +0 -24
  516. data/spec/sequences/alignment-4_hits_tblastn_2.2.30.txt +0 -24
  517. data/spec/sequences/alignment-4_hits_tblastx.txt +0 -318
  518. data/spec/sequences/nucleotide_query.fa +0 -21
  519. data/spec/sequences/problematic_query.fa +0 -5
  520. data/spec/sequences/protein_query.fa +0 -9
  521. data/spec/sequences/sample_query_fire_ant_obps.fa +0 -44
  522. data/spec/sequences/sequenceserver-2_hits.fa +0 -10
  523. data/spec/sequences/sequenceserver-SI2.2.0_06267.fa +0 -5
  524. data/spec/sequences/sp_P04637_P53_HUMAN_gi_1099170394_ref_XP_018868681_1.txt +0 -6
  525. data/spec/sequences/sp_P04637_P53_HUMAN_gi_120407068_ref_NP_000537_3.txt +0 -6
  526. data/spec/sequences/sp_P04637_P53_HUMAN_gi_1484127324_gb_MG595988_1.txt +0 -6
  527. data/spec/sequences/sp_P04637_P53_HUMAN_gi_395440626_gb_JQ694049_1.txt +0 -6
  528. data/spec/sequences/sp_P04637_P53_HUMAN_sp_P04637_P53_HUMAN.txt +0 -6
  529. data/spec/sequenceserver_spec.rb +0 -90
  530. data/spec/spec_helper.rb +0 -63
data/spec/dotdir/blast_2.2.31/blastp/job.yaml DELETED
@@ -1,8 +0,0 @@
1
- --- !ruby/object:SequenceServer::BLAST::Job
2
- id: 'blast_2.2.31/blastp'
3
- submitted_at: 2019-06-23 13:12:56.373514700 +01:00
4
- imported_xml_file: BLASTP_XML_2.2.31.xml
5
- advanced_params: {}
6
- databases: []
7
- completed_at: 2019-06-23 13:12:56.390914700 +01:00
8
- exitstatus: 0
data/spec/dotdir/blast_2.2.31/blastx/BLASTX_XML_2.2.31.xml DELETED
@@ -1,1181 +0,0 @@
1
- <?xml version="1.0"?>
2
- <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
3
- <BlastOutput>
4
- <BlastOutput_program>blastx</BlastOutput_program>
5
- <BlastOutput_version>BLASTX 2.2.31+</BlastOutput_version>
6
- <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
7
- <BlastOutput_db>nr_db/nr</BlastOutput_db>
8
- <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
9
- <BlastOutput_query-def>MH011443.1 Homo sapiens TP53 (TP53) gene, exon 5 and partial cds</BlastOutput_query-def>
10
- <BlastOutput_query-len>123</BlastOutput_query-len>
11
- <BlastOutput_param>
12
- <Parameters>
13
- <Parameters_matrix>BLOSUM62</Parameters_matrix>
14
- <Parameters_expect>10</Parameters_expect>
15
- <Parameters_gap-open>11</Parameters_gap-open>
16
- <Parameters_gap-extend>1</Parameters_gap-extend>
17
- <Parameters_filter>L;</Parameters_filter>
18
- </Parameters>
19
- </BlastOutput_param>
20
- <BlastOutput_iterations>
21
- <Iteration>
22
- <Iteration_iter-num>1</Iteration_iter-num>
23
- <Iteration_query-ID>Query_1</Iteration_query-ID>
24
- <Iteration_query-def>MH011443.1 Homo sapiens TP53 (TP53) gene, exon 5 and partial cds</Iteration_query-def>
25
- <Iteration_query-len>123</Iteration_query-len>
26
- <Iteration_hits>
27
- <Hit>
28
- <Hit_num>1</Hit_num>
29
- <Hit_id>gi|1486783307|gb|AYF55702.1|</Hit_id>
30
- <Hit_def>TP53, partial [Homo sapiens]</Hit_def>
31
- <Hit_accession>AYF55702</Hit_accession>
32
- <Hit_len>41</Hit_len>
33
- <Hit_hsps>
34
- <Hsp>
35
- <Hsp_num>1</Hsp_num>
36
- <Hsp_bit-score>87.4261</Hsp_bit-score>
37
- <Hsp_score>215</Hsp_score>
38
- <Hsp_evalue>1.00256e-20</Hsp_evalue>
39
- <Hsp_query-from>1</Hsp_query-from>
40
- <Hsp_query-to>123</Hsp_query-to>
41
- <Hsp_hit-from>1</Hsp_hit-from>
42
- <Hsp_hit-to>41</Hsp_hit-to>
43
- <Hsp_query-frame>1</Hsp_query-frame>
44
- <Hsp_hit-frame>0</Hsp_hit-frame>
45
- <Hsp_identity>41</Hsp_identity>
46
- <Hsp_positive>41</Hsp_positive>
47
- <Hsp_gaps>0</Hsp_gaps>
48
- <Hsp_align-len>41</Hsp_align-len>
49
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
50
- <Hsp_hseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
51
- <Hsp_midline>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
52
- </Hsp>
53
- </Hit_hsps>
54
- </Hit>
55
- <Hit>
56
- <Hit_num>2</Hit_num>
57
- <Hit_id>gi|379056362|dbj|BAL63213.2|</Hit_id>
58
- <Hit_def>p53 protein, partial [Homo sapiens]</Hit_def>
59
- <Hit_accession>BAL63213</Hit_accession>
60
- <Hit_len>61</Hit_len>
61
- <Hit_hsps>
62
- <Hsp>
63
- <Hsp_num>1</Hsp_num>
64
- <Hsp_bit-score>87.8113</Hsp_bit-score>
65
- <Hsp_score>216</Hsp_score>
66
- <Hsp_evalue>1.06236e-20</Hsp_evalue>
67
- <Hsp_query-from>1</Hsp_query-from>
68
- <Hsp_query-to>123</Hsp_query-to>
69
- <Hsp_hit-from>21</Hsp_hit-from>
70
- <Hsp_hit-to>61</Hsp_hit-to>
71
- <Hsp_query-frame>1</Hsp_query-frame>
72
- <Hsp_hit-frame>0</Hsp_hit-frame>
73
- <Hsp_identity>40</Hsp_identity>
74
- <Hsp_positive>41</Hsp_positive>
75
- <Hsp_gaps>0</Hsp_gaps>
76
- <Hsp_align-len>41</Hsp_align-len>
77
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
78
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
79
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
80
- </Hsp>
81
- </Hit_hsps>
82
- </Hit>
83
- <Hit>
84
- <Hit_num>3</Hit_num>
85
- <Hit_id>gi|42821410|dbj|BAD11806.1|</Hit_id>
86
- <Hit_def>P53, partial [Homo sapiens] &gt;gi|122938420|gb|ABM69023.1| tumor protein p53, partial [Homo sapiens] &gt;gi|169666820|gb|ACA63978.1| tumor protein p53, partial [Homo sapiens] &gt;gi|349734066|gb|AEQ16483.1| p53, partial [Homo sapiens]</Hit_def>
87
- <Hit_accession>BAD11806</Hit_accession>
88
- <Hit_len>61</Hit_len>
89
- <Hit_hsps>
90
- <Hsp>
91
- <Hsp_num>1</Hsp_num>
92
- <Hsp_bit-score>87.8113</Hsp_bit-score>
93
- <Hsp_score>216</Hsp_score>
94
- <Hsp_evalue>1.19637e-20</Hsp_evalue>
95
- <Hsp_query-from>1</Hsp_query-from>
96
- <Hsp_query-to>123</Hsp_query-to>
97
- <Hsp_hit-from>21</Hsp_hit-from>
98
- <Hsp_hit-to>61</Hsp_hit-to>
99
- <Hsp_query-frame>1</Hsp_query-frame>
100
- <Hsp_hit-frame>0</Hsp_hit-frame>
101
- <Hsp_identity>40</Hsp_identity>
102
- <Hsp_positive>41</Hsp_positive>
103
- <Hsp_gaps>0</Hsp_gaps>
104
- <Hsp_align-len>41</Hsp_align-len>
105
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
106
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
107
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
108
- </Hsp>
109
- </Hit_hsps>
110
- </Hit>
111
- <Hit>
112
- <Hit_num>4</Hit_num>
113
- <Hit_id>gi|157086935|gb|ABV21350.1|</Hit_id>
114
- <Hit_def>p53, partial [Homo sapiens]</Hit_def>
115
- <Hit_accession>ABV21350</Hit_accession>
116
- <Hit_len>61</Hit_len>
117
- <Hit_hsps>
118
- <Hsp>
119
- <Hsp_num>1</Hsp_num>
120
- <Hsp_bit-score>87.4261</Hsp_bit-score>
121
- <Hsp_score>215</Hsp_score>
122
- <Hsp_evalue>1.31849e-20</Hsp_evalue>
123
- <Hsp_query-from>1</Hsp_query-from>
124
- <Hsp_query-to>123</Hsp_query-to>
125
- <Hsp_hit-from>21</Hsp_hit-from>
126
- <Hsp_hit-to>61</Hsp_hit-to>
127
- <Hsp_query-frame>1</Hsp_query-frame>
128
- <Hsp_hit-frame>0</Hsp_hit-frame>
129
- <Hsp_identity>40</Hsp_identity>
130
- <Hsp_positive>41</Hsp_positive>
131
- <Hsp_gaps>0</Hsp_gaps>
132
- <Hsp_align-len>41</Hsp_align-len>
133
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
134
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
135
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
136
- </Hsp>
137
- </Hit_hsps>
138
- </Hit>
139
- <Hit>
140
- <Hit_num>5</Hit_num>
141
- <Hit_id>gi|1528997475|gb|AZI94701.1|</Hit_id>
142
- <Hit_def>tumor protein p53, partial [Homo sapiens]</Hit_def>
143
- <Hit_accession>AZI94701</Hit_accession>
144
- <Hit_len>58</Hit_len>
145
- <Hit_hsps>
146
- <Hsp>
147
- <Hsp_num>1</Hsp_num>
148
- <Hsp_bit-score>87.4261</Hsp_bit-score>
149
- <Hsp_score>215</Hsp_score>
150
- <Hsp_evalue>1.48218e-20</Hsp_evalue>
151
- <Hsp_query-from>1</Hsp_query-from>
152
- <Hsp_query-to>123</Hsp_query-to>
153
- <Hsp_hit-from>12</Hsp_hit-from>
154
- <Hsp_hit-to>52</Hsp_hit-to>
155
- <Hsp_query-frame>1</Hsp_query-frame>
156
- <Hsp_hit-frame>0</Hsp_hit-frame>
157
- <Hsp_identity>40</Hsp_identity>
158
- <Hsp_positive>41</Hsp_positive>
159
- <Hsp_gaps>0</Hsp_gaps>
160
- <Hsp_align-len>41</Hsp_align-len>
161
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
162
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
163
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
164
- </Hsp>
165
- </Hit_hsps>
166
- </Hit>
167
- <Hit>
168
- <Hit_num>6</Hit_num>
169
- <Hit_id>gi|127461441|gb|ABO28415.1|</Hit_id>
170
- <Hit_def>tumor protein p53, partial [Homo sapiens]</Hit_def>
171
- <Hit_accession>ABO28415</Hit_accession>
172
- <Hit_len>88</Hit_len>
173
- <Hit_hsps>
174
- <Hsp>
175
- <Hsp_num>1</Hsp_num>
176
- <Hsp_bit-score>88.1965</Hsp_bit-score>
177
- <Hsp_score>217</Hsp_score>
178
- <Hsp_evalue>1.62053e-20</Hsp_evalue>
179
- <Hsp_query-from>1</Hsp_query-from>
180
- <Hsp_query-to>123</Hsp_query-to>
181
- <Hsp_hit-from>21</Hsp_hit-from>
182
- <Hsp_hit-to>61</Hsp_hit-to>
183
- <Hsp_query-frame>1</Hsp_query-frame>
184
- <Hsp_hit-frame>0</Hsp_hit-frame>
185
- <Hsp_identity>40</Hsp_identity>
186
- <Hsp_positive>41</Hsp_positive>
187
- <Hsp_gaps>0</Hsp_gaps>
188
- <Hsp_align-len>41</Hsp_align-len>
189
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
190
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
191
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
192
- </Hsp>
193
- </Hit_hsps>
194
- </Hit>
195
- <Hit>
196
- <Hit_num>7</Hit_num>
197
- <Hit_id>gi|89147794|gb|ABD62752.1|</Hit_id>
198
- <Hit_def>p53deltaEx4, partial [Homo sapiens]</Hit_def>
199
- <Hit_accession>ABD62752</Hit_accession>
200
- <Hit_len>112</Hit_len>
201
- <Hit_hsps>
202
- <Hsp>
203
- <Hsp_num>1</Hsp_num>
204
- <Hsp_bit-score>88.5817</Hsp_bit-score>
205
- <Hsp_score>218</Hsp_score>
206
- <Hsp_evalue>1.70462e-20</Hsp_evalue>
207
- <Hsp_query-from>1</Hsp_query-from>
208
- <Hsp_query-to>123</Hsp_query-to>
209
- <Hsp_hit-from>58</Hsp_hit-from>
210
- <Hsp_hit-to>98</Hsp_hit-to>
211
- <Hsp_query-frame>1</Hsp_query-frame>
212
- <Hsp_hit-frame>0</Hsp_hit-frame>
213
- <Hsp_identity>40</Hsp_identity>
214
- <Hsp_positive>41</Hsp_positive>
215
- <Hsp_gaps>0</Hsp_gaps>
216
- <Hsp_align-len>41</Hsp_align-len>
217
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
218
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
219
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
220
- </Hsp>
221
- </Hit_hsps>
222
- </Hit>
223
- <Hit>
224
- <Hit_num>8</Hit_num>
225
- <Hit_id>gi|127461465|gb|ABO28427.1|</Hit_id>
226
- <Hit_def>tumor protein p53, partial [Homo sapiens]</Hit_def>
227
- <Hit_accession>ABO28427</Hit_accession>
228
- <Hit_len>89</Hit_len>
229
- <Hit_hsps>
230
- <Hsp>
231
- <Hsp_num>1</Hsp_num>
232
- <Hsp_bit-score>87.8113</Hsp_bit-score>
233
- <Hsp_score>216</Hsp_score>
234
- <Hsp_evalue>1.93025e-20</Hsp_evalue>
235
- <Hsp_query-from>1</Hsp_query-from>
236
- <Hsp_query-to>123</Hsp_query-to>
237
- <Hsp_hit-from>21</Hsp_hit-from>
238
- <Hsp_hit-to>61</Hsp_hit-to>
239
- <Hsp_query-frame>1</Hsp_query-frame>
240
- <Hsp_hit-frame>0</Hsp_hit-frame>
241
- <Hsp_identity>40</Hsp_identity>
242
- <Hsp_positive>41</Hsp_positive>
243
- <Hsp_gaps>0</Hsp_gaps>
244
- <Hsp_align-len>41</Hsp_align-len>
245
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
246
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
247
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
248
- </Hsp>
249
- </Hit_hsps>
250
- </Hit>
251
- <Hit>
252
- <Hit_num>9</Hit_num>
253
- <Hit_id>gi|99031288|gb|ABF61799.1|</Hit_id>
254
- <Hit_def>truncated p53, partial [Homo sapiens]</Hit_def>
255
- <Hit_accession>ABF61799</Hit_accession>
256
- <Hit_len>81</Hit_len>
257
- <Hit_hsps>
258
- <Hsp>
259
- <Hsp_num>1</Hsp_num>
260
- <Hsp_bit-score>87.4261</Hsp_bit-score>
261
- <Hsp_score>215</Hsp_score>
262
- <Hsp_evalue>2.10603e-20</Hsp_evalue>
263
- <Hsp_query-from>1</Hsp_query-from>
264
- <Hsp_query-to>123</Hsp_query-to>
265
- <Hsp_hit-from>5</Hsp_hit-from>
266
- <Hsp_hit-to>45</Hsp_hit-to>
267
- <Hsp_query-frame>1</Hsp_query-frame>
268
- <Hsp_hit-frame>0</Hsp_hit-frame>
269
- <Hsp_identity>40</Hsp_identity>
270
- <Hsp_positive>41</Hsp_positive>
271
- <Hsp_gaps>0</Hsp_gaps>
272
- <Hsp_align-len>41</Hsp_align-len>
273
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
274
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
275
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
276
- </Hsp>
277
- </Hit_hsps>
278
- </Hit>
279
- <Hit>
280
- <Hit_num>10</Hit_num>
281
- <Hit_id>gi|1472901694|gb|AXU92289.1|</Hit_id>
282
- <Hit_def>TP53, partial [Homo sapiens]</Hit_def>
283
- <Hit_accession>AXU92289</Hit_accession>
284
- <Hit_len>41</Hit_len>
285
- <Hit_hsps>
286
- <Hsp>
287
- <Hsp_num>1</Hsp_num>
288
- <Hsp_bit-score>86.2705</Hsp_bit-score>
289
- <Hsp_score>212</Hsp_score>
290
- <Hsp_evalue>2.45968e-20</Hsp_evalue>
291
- <Hsp_query-from>1</Hsp_query-from>
292
- <Hsp_query-to>123</Hsp_query-to>
293
- <Hsp_hit-from>1</Hsp_hit-from>
294
- <Hsp_hit-to>41</Hsp_hit-to>
295
- <Hsp_query-frame>1</Hsp_query-frame>
296
- <Hsp_hit-frame>0</Hsp_hit-frame>
297
- <Hsp_identity>40</Hsp_identity>
298
- <Hsp_positive>41</Hsp_positive>
299
- <Hsp_gaps>0</Hsp_gaps>
300
- <Hsp_align-len>41</Hsp_align-len>
301
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
302
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
303
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
304
- </Hsp>
305
- </Hit_hsps>
306
- </Hit>
307
- <Hit>
308
- <Hit_num>11</Hit_num>
309
- <Hit_id>gi|307333898|gb|ADN42962.1|</Hit_id>
310
- <Hit_def>tumor protein p53, partial [Homo sapiens]</Hit_def>
311
- <Hit_accession>ADN42962</Hit_accession>
312
- <Hit_len>99</Hit_len>
313
- <Hit_hsps>
314
- <Hsp>
315
- <Hsp_num>1</Hsp_num>
316
- <Hsp_bit-score>87.8113</Hsp_bit-score>
317
- <Hsp_score>216</Hsp_score>
318
- <Hsp_evalue>2.56496e-20</Hsp_evalue>
319
- <Hsp_query-from>1</Hsp_query-from>
320
- <Hsp_query-to>123</Hsp_query-to>
321
- <Hsp_hit-from>21</Hsp_hit-from>
322
- <Hsp_hit-to>61</Hsp_hit-to>
323
- <Hsp_query-frame>1</Hsp_query-frame>
324
- <Hsp_hit-frame>0</Hsp_hit-frame>
325
- <Hsp_identity>40</Hsp_identity>
326
- <Hsp_positive>41</Hsp_positive>
327
- <Hsp_gaps>0</Hsp_gaps>
328
- <Hsp_align-len>41</Hsp_align-len>
329
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
330
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
331
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
332
- </Hsp>
333
- </Hit_hsps>
334
- </Hit>
335
- <Hit>
336
- <Hit_num>12</Hit_num>
337
- <Hit_id>gi|430765717|gb|AGA62856.1|</Hit_id>
338
- <Hit_def>tumor suppressor p53, partial [Homo sapiens]</Hit_def>
339
- <Hit_accession>AGA62856</Hit_accession>
340
- <Hit_len>99</Hit_len>
341
- <Hit_hsps>
342
- <Hsp>
343
- <Hsp_num>1</Hsp_num>
344
- <Hsp_bit-score>87.8113</Hsp_bit-score>
345
- <Hsp_score>216</Hsp_score>
346
- <Hsp_evalue>2.70655e-20</Hsp_evalue>
347
- <Hsp_query-from>1</Hsp_query-from>
348
- <Hsp_query-to>123</Hsp_query-to>
349
- <Hsp_hit-from>21</Hsp_hit-from>
350
- <Hsp_hit-to>61</Hsp_hit-to>
351
- <Hsp_query-frame>1</Hsp_query-frame>
352
- <Hsp_hit-frame>0</Hsp_hit-frame>
353
- <Hsp_identity>40</Hsp_identity>
354
- <Hsp_positive>41</Hsp_positive>
355
- <Hsp_gaps>0</Hsp_gaps>
356
- <Hsp_align-len>41</Hsp_align-len>
357
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
358
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
359
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
360
- </Hsp>
361
- </Hit_hsps>
362
- </Hit>
363
- <Hit>
364
- <Hit_num>13</Hit_num>
365
- <Hit_id>gi|430766052|gb|AGA63023.1|</Hit_id>
366
- <Hit_def>tumor suppressor p53, partial [Homo sapiens]</Hit_def>
367
- <Hit_accession>AGA63023</Hit_accession>
368
- <Hit_len>99</Hit_len>
369
- <Hit_hsps>
370
- <Hsp>
371
- <Hsp_num>1</Hsp_num>
372
- <Hsp_bit-score>87.8113</Hsp_bit-score>
373
- <Hsp_score>216</Hsp_score>
374
- <Hsp_evalue>2.76535e-20</Hsp_evalue>
375
- <Hsp_query-from>1</Hsp_query-from>
376
- <Hsp_query-to>123</Hsp_query-to>
377
- <Hsp_hit-from>21</Hsp_hit-from>
378
- <Hsp_hit-to>61</Hsp_hit-to>
379
- <Hsp_query-frame>1</Hsp_query-frame>
380
- <Hsp_hit-frame>0</Hsp_hit-frame>
381
- <Hsp_identity>40</Hsp_identity>
382
- <Hsp_positive>41</Hsp_positive>
383
- <Hsp_gaps>0</Hsp_gaps>
384
- <Hsp_align-len>41</Hsp_align-len>
385
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
386
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
387
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
388
- </Hsp>
389
- </Hit_hsps>
390
- </Hit>
391
- <Hit>
392
- <Hit_num>14</Hit_num>
393
- <Hit_id>gi|430766026|gb|AGA63010.1|</Hit_id>
394
- <Hit_def>tumor suppressor p53, partial [Homo sapiens]</Hit_def>
395
- <Hit_accession>AGA63010</Hit_accession>
396
- <Hit_len>99</Hit_len>
397
- <Hit_hsps>
398
- <Hsp>
399
- <Hsp_num>1</Hsp_num>
400
- <Hsp_bit-score>87.8113</Hsp_bit-score>
401
- <Hsp_score>216</Hsp_score>
402
- <Hsp_evalue>2.79523e-20</Hsp_evalue>
403
- <Hsp_query-from>1</Hsp_query-from>
404
- <Hsp_query-to>123</Hsp_query-to>
405
- <Hsp_hit-from>21</Hsp_hit-from>
406
- <Hsp_hit-to>61</Hsp_hit-to>
407
- <Hsp_query-frame>1</Hsp_query-frame>
408
- <Hsp_hit-frame>0</Hsp_hit-frame>
409
- <Hsp_identity>40</Hsp_identity>
410
- <Hsp_positive>41</Hsp_positive>
411
- <Hsp_gaps>0</Hsp_gaps>
412
- <Hsp_align-len>41</Hsp_align-len>
413
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
414
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
415
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
416
- </Hsp>
417
- </Hit_hsps>
418
- </Hit>
419
- <Hit>
420
- <Hit_num>15</Hit_num>
421
- <Hit_id>gi|430766042|gb|AGA63018.1|</Hit_id>
422
- <Hit_def>tumor suppressor p53, partial [Homo sapiens]</Hit_def>
423
- <Hit_accession>AGA63018</Hit_accession>
424
- <Hit_len>99</Hit_len>
425
- <Hit_hsps>
426
- <Hsp>
427
- <Hsp_num>1</Hsp_num>
428
- <Hsp_bit-score>87.8113</Hsp_bit-score>
429
- <Hsp_score>216</Hsp_score>
430
- <Hsp_evalue>2.82543e-20</Hsp_evalue>
431
- <Hsp_query-from>1</Hsp_query-from>
432
- <Hsp_query-to>123</Hsp_query-to>
433
- <Hsp_hit-from>21</Hsp_hit-from>
434
- <Hsp_hit-to>61</Hsp_hit-to>
435
- <Hsp_query-frame>1</Hsp_query-frame>
436
- <Hsp_hit-frame>0</Hsp_hit-frame>
437
- <Hsp_identity>40</Hsp_identity>
438
- <Hsp_positive>41</Hsp_positive>
439
- <Hsp_gaps>0</Hsp_gaps>
440
- <Hsp_align-len>41</Hsp_align-len>
441
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
442
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
443
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
444
- </Hsp>
445
- </Hit_hsps>
446
- </Hit>
447
- <Hit>
448
- <Hit_num>16</Hit_num>
449
- <Hit_id>gi|430765725|gb|AGA62860.1|</Hit_id>
450
- <Hit_def>tumor suppressor p53, partial [Homo sapiens]</Hit_def>
451
- <Hit_accession>AGA62860</Hit_accession>
452
- <Hit_len>99</Hit_len>
453
- <Hit_hsps>
454
- <Hsp>
455
- <Hsp_num>1</Hsp_num>
456
- <Hsp_bit-score>87.8113</Hsp_bit-score>
457
- <Hsp_score>216</Hsp_score>
458
- <Hsp_evalue>2.88681e-20</Hsp_evalue>
459
- <Hsp_query-from>1</Hsp_query-from>
460
- <Hsp_query-to>123</Hsp_query-to>
461
- <Hsp_hit-from>21</Hsp_hit-from>
462
- <Hsp_hit-to>61</Hsp_hit-to>
463
- <Hsp_query-frame>1</Hsp_query-frame>
464
- <Hsp_hit-frame>0</Hsp_hit-frame>
465
- <Hsp_identity>40</Hsp_identity>
466
- <Hsp_positive>41</Hsp_positive>
467
- <Hsp_gaps>0</Hsp_gaps>
468
- <Hsp_align-len>41</Hsp_align-len>
469
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
470
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
471
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
472
- </Hsp>
473
- </Hit_hsps>
474
- </Hit>
475
- <Hit>
476
- <Hit_num>17</Hit_num>
477
- <Hit_id>gi|127461435|gb|ABO28412.1|</Hit_id>
478
- <Hit_def>tumor protein p53, partial [Homo sapiens] &gt;gi|127461437|gb|ABO28413.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461439|gb|ABO28414.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461443|gb|ABO28416.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461445|gb|ABO28417.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461447|gb|ABO28418.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461449|gb|ABO28419.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461451|gb|ABO28420.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461453|gb|ABO28421.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461455|gb|ABO28422.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461457|gb|ABO28423.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461459|gb|ABO28424.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461461|gb|ABO28425.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461463|gb|ABO28426.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461467|gb|ABO28428.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461469|gb|ABO28429.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461471|gb|ABO28430.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461473|gb|ABO28431.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461475|gb|ABO28432.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461477|gb|ABO28433.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461479|gb|ABO28434.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461481|gb|ABO28435.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461483|gb|ABO28436.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461485|gb|ABO28437.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461487|gb|ABO28438.1| tumor protein p53, partial [Homo sapiens] &gt;gi|127461489|gb|ABO28439.1| tumor protein p53, partial [Homo sapiens] &gt;gi|430765661|gb|AGA62828.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765663|gb|AGA62829.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765665|gb|AGA62830.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765667|gb|AGA62831.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765671|gb|AGA62833.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765673|gb|AGA62834.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765675|gb|AGA62835.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765677|gb|AGA62836.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765679|gb|AGA62837.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765681|gb|AGA62838.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765683|gb|AGA62839.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765685|gb|AGA62840.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765687|gb|AGA62841.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765689|gb|AGA62842.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765691|gb|AGA62843.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765693|gb|AGA62844.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765695|gb|AGA62845.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765697|gb|AGA62846.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765699|gb|AGA62847.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765701|gb|AGA62848.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765703|gb|AGA62849.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765705|gb|AGA62850.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765707|gb|AGA62851.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765709|gb|AGA62852.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765711|gb|AGA62853.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765713|gb|AGA62854.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765715|gb|AGA62855.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765719|gb|AGA62857.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765721|gb|AGA62858.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765723|gb|AGA62859.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765727|gb|AGA62861.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765729|gb|AGA62862.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765731|gb|AGA62863.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765733|gb|AGA62864.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765735|gb|AGA62865.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765737|gb|AGA62866.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765739|gb|AGA62867.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765741|gb|AGA62868.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765743|gb|AGA62869.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765745|gb|AGA62870.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765747|gb|AGA62871.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765749|gb|AGA62872.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765751|gb|AGA62873.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765753|gb|AGA62874.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765755|gb|AGA62875.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765757|gb|AGA62876.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765759|gb|AGA62877.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765761|gb|AGA62878.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765763|gb|AGA62879.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765765|gb|AGA62880.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765767|gb|AGA62881.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765769|gb|AGA62882.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765771|gb|AGA62883.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765773|gb|AGA62884.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765775|gb|AGA62885.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765777|gb|AGA62886.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765779|gb|AGA62887.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765781|gb|AGA62888.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765783|gb|AGA62889.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765785|gb|AGA62890.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765787|gb|AGA62891.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765789|gb|AGA62892.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765791|gb|AGA62893.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765793|gb|AGA62894.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765795|gb|AGA62895.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765797|gb|AGA62896.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765799|gb|AGA62897.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765801|gb|AGA62898.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765803|gb|AGA62899.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765805|gb|AGA62900.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765807|gb|AGA62901.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765809|gb|AGA62902.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765811|gb|AGA62903.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765813|gb|AGA62904.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765815|gb|AGA62905.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765817|gb|AGA62906.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765819|gb|AGA62907.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765821|gb|AGA62908.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765823|gb|AGA62909.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765825|gb|AGA62910.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765827|gb|AGA62911.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765829|gb|AGA62912.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765831|gb|AGA62913.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765833|gb|AGA62914.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765835|gb|AGA62915.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765837|gb|AGA62916.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765839|gb|AGA62917.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765841|gb|AGA62918.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765843|gb|AGA62919.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765845|gb|AGA62920.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765847|gb|AGA62921.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765849|gb|AGA62922.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765851|gb|AGA62923.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765853|gb|AGA62924.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765855|gb|AGA62925.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765857|gb|AGA62926.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765859|gb|AGA62927.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765861|gb|AGA62928.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765863|gb|AGA62929.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765865|gb|AGA62930.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765867|gb|AGA62931.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765869|gb|AGA62932.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765871|gb|AGA62933.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765873|gb|AGA62934.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765875|gb|AGA62935.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765877|gb|AGA62936.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765879|gb|AGA62937.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765881|gb|AGA62938.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765883|gb|AGA62939.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765885|gb|AGA62940.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765887|gb|AGA62941.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765889|gb|AGA62942.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765891|gb|AGA62943.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765893|gb|AGA62944.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765895|gb|AGA62945.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765897|gb|AGA62946.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765899|gb|AGA62947.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765901|gb|AGA62948.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765903|gb|AGA62949.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765905|gb|AGA62950.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765907|gb|AGA62951.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765909|gb|AGA62952.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765911|gb|AGA62953.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765913|gb|AGA62954.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765915|gb|AGA62955.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765917|gb|AGA62956.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765919|gb|AGA62957.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765921|gb|AGA62958.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765923|gb|AGA62959.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765925|gb|AGA62960.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765927|gb|AGA62961.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765929|gb|AGA62962.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765931|gb|AGA62963.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765933|gb|AGA62964.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765935|gb|AGA62965.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765937|gb|AGA62966.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765939|gb|AGA62967.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765941|gb|AGA62968.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765943|gb|AGA62969.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765945|gb|AGA62970.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765947|gb|AGA62971.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765949|gb|AGA62972.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765951|gb|AGA62973.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765953|gb|AGA62974.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765955|gb|AGA62975.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765957|gb|AGA62976.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765959|gb|AGA62977.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765961|gb|AGA62978.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765963|gb|AGA62979.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765965|gb|AGA62980.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765967|gb|AGA62981.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765969|gb|AGA62982.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765971|gb|AGA62983.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765973|gb|AGA62984.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765975|gb|AGA62985.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765977|gb|AGA62986.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765979|gb|AGA62987.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765981|gb|AGA62988.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765983|gb|AGA62989.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765985|gb|AGA62990.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765987|gb|AGA62991.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765989|gb|AGA62992.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765991|gb|AGA62993.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765993|gb|AGA62994.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765995|gb|AGA62995.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765997|gb|AGA62996.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430765999|gb|AGA62997.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766001|gb|AGA62998.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766003|gb|AGA62999.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766005|gb|AGA63000.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766007|gb|AGA63001.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766009|gb|AGA63002.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766011|gb|AGA63003.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766013|gb|AGA63004.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766015|gb|AGA63005.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766017|gb|AGA63006.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766019|gb|AGA63007.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766022|gb|AGA63008.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766024|gb|AGA63009.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766028|gb|AGA63011.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766030|gb|AGA63012.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766034|gb|AGA63014.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766038|gb|AGA63016.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766044|gb|AGA63019.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766046|gb|AGA63020.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766048|gb|AGA63021.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766050|gb|AGA63022.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766054|gb|AGA63024.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766056|gb|AGA63025.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766058|gb|AGA63026.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766062|gb|AGA63028.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766066|gb|AGA63030.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766068|gb|AGA63031.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766070|gb|AGA63032.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766072|gb|AGA63033.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766074|gb|AGA63034.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766076|gb|AGA63035.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766080|gb|AGA63037.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766084|gb|AGA63039.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766086|gb|AGA63040.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766088|gb|AGA63041.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766090|gb|AGA63042.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766096|gb|AGA63045.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766098|gb|AGA63046.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766100|gb|AGA63047.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766102|gb|AGA63048.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766104|gb|AGA63049.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766106|gb|AGA63050.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766108|gb|AGA63051.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766112|gb|AGA63053.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766114|gb|AGA63054.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766116|gb|AGA63055.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766118|gb|AGA63056.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766120|gb|AGA63057.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766122|gb|AGA63058.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766124|gb|AGA63059.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766126|gb|AGA63060.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766128|gb|AGA63061.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766130|gb|AGA63062.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766132|gb|AGA63063.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766134|gb|AGA63064.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766136|gb|AGA63065.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766138|gb|AGA63066.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766140|gb|AGA63067.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766142|gb|AGA63068.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766144|gb|AGA63069.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766146|gb|AGA63070.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766148|gb|AGA63071.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766150|gb|AGA63072.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766152|gb|AGA63073.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766154|gb|AGA63074.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766156|gb|AGA63075.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766158|gb|AGA63076.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766160|gb|AGA63077.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766162|gb|AGA63078.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766164|gb|AGA63079.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766166|gb|AGA63080.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766168|gb|AGA63081.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766170|gb|AGA63082.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766172|gb|AGA63083.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766174|gb|AGA63084.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766176|gb|AGA63085.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766178|gb|AGA63086.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766180|gb|AGA63087.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766182|gb|AGA63088.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766184|gb|AGA63089.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766186|gb|AGA63090.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766188|gb|AGA63091.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766190|gb|AGA63092.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766192|gb|AGA63093.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766194|gb|AGA63094.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766196|gb|AGA63095.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766198|gb|AGA63096.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766200|gb|AGA63097.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766202|gb|AGA63098.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766204|gb|AGA63099.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766206|gb|AGA63100.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766208|gb|AGA63101.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766210|gb|AGA63102.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766212|gb|AGA63103.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766214|gb|AGA63104.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766216|gb|AGA63105.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766218|gb|AGA63106.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766220|gb|AGA63107.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766222|gb|AGA63108.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766224|gb|AGA63109.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766226|gb|AGA63110.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766228|gb|AGA63111.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766230|gb|AGA63112.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766232|gb|AGA63113.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766234|gb|AGA63114.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766236|gb|AGA63115.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766238|gb|AGA63116.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766240|gb|AGA63117.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766242|gb|AGA63118.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766244|gb|AGA63119.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766246|gb|AGA63120.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766248|gb|AGA63121.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766250|gb|AGA63122.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766252|gb|AGA63123.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766254|gb|AGA63124.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766256|gb|AGA63125.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766258|gb|AGA63126.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766260|gb|AGA63127.1| tumor suppressor p53, partial [Homo sapiens] &gt;gi|430766262|gb|AGA63128.1| tumor suppressor p53, partial [Homo sapiens]</Hit_def>
479
- <Hit_accession>ABO28412</Hit_accession>
480
- <Hit_len>99</Hit_len>
481
- <Hit_hsps>
482
- <Hsp>
483
- <Hsp_num>1</Hsp_num>
484
- <Hsp_bit-score>87.8113</Hsp_bit-score>
485
- <Hsp_score>216</Hsp_score>
486
- <Hsp_evalue>2.918e-20</Hsp_evalue>
487
- <Hsp_query-from>1</Hsp_query-from>
488
- <Hsp_query-to>123</Hsp_query-to>
489
- <Hsp_hit-from>21</Hsp_hit-from>
490
- <Hsp_hit-to>61</Hsp_hit-to>
491
- <Hsp_query-frame>1</Hsp_query-frame>
492
- <Hsp_hit-frame>0</Hsp_hit-frame>
493
- <Hsp_identity>40</Hsp_identity>
494
- <Hsp_positive>41</Hsp_positive>
495
- <Hsp_gaps>0</Hsp_gaps>
496
- <Hsp_align-len>41</Hsp_align-len>
497
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
498
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
499
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
500
- </Hsp>
501
- </Hit_hsps>
502
- </Hit>
503
- <Hit>
504
- <Hit_num>18</Hit_num>
505
- <Hit_id>gi|430766094|gb|AGA63044.1|</Hit_id>
506
- <Hit_def>tumor suppressor p53, partial [Homo sapiens]</Hit_def>
507
- <Hit_accession>AGA63044</Hit_accession>
508
- <Hit_len>99</Hit_len>
509
- <Hit_hsps>
510
- <Hsp>
511
- <Hsp_num>1</Hsp_num>
512
- <Hsp_bit-score>87.8113</Hsp_bit-score>
513
- <Hsp_score>216</Hsp_score>
514
- <Hsp_evalue>2.98139e-20</Hsp_evalue>
515
- <Hsp_query-from>1</Hsp_query-from>
516
- <Hsp_query-to>123</Hsp_query-to>
517
- <Hsp_hit-from>21</Hsp_hit-from>
518
- <Hsp_hit-to>61</Hsp_hit-to>
519
- <Hsp_query-frame>1</Hsp_query-frame>
520
- <Hsp_hit-frame>0</Hsp_hit-frame>
521
- <Hsp_identity>40</Hsp_identity>
522
- <Hsp_positive>41</Hsp_positive>
523
- <Hsp_gaps>0</Hsp_gaps>
524
- <Hsp_align-len>41</Hsp_align-len>
525
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
526
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
527
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
528
- </Hsp>
529
- </Hit_hsps>
530
- </Hit>
531
- <Hit>
532
- <Hit_num>19</Hit_num>
533
- <Hit_id>gi|430766060|gb|AGA63027.1|</Hit_id>
534
- <Hit_def>tumor suppressor p53, partial [Homo sapiens]</Hit_def>
535
- <Hit_accession>AGA63027</Hit_accession>
536
- <Hit_len>99</Hit_len>
537
- <Hit_hsps>
538
- <Hsp>
539
- <Hsp_num>1</Hsp_num>
540
- <Hsp_bit-score>87.8113</Hsp_bit-score>
541
- <Hsp_score>216</Hsp_score>
542
- <Hsp_evalue>3.0136e-20</Hsp_evalue>
543
- <Hsp_query-from>1</Hsp_query-from>
544
- <Hsp_query-to>123</Hsp_query-to>
545
- <Hsp_hit-from>21</Hsp_hit-from>
546
- <Hsp_hit-to>61</Hsp_hit-to>
547
- <Hsp_query-frame>1</Hsp_query-frame>
548
- <Hsp_hit-frame>0</Hsp_hit-frame>
549
- <Hsp_identity>40</Hsp_identity>
550
- <Hsp_positive>41</Hsp_positive>
551
- <Hsp_gaps>0</Hsp_gaps>
552
- <Hsp_align-len>41</Hsp_align-len>
553
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
554
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
555
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
556
- </Hsp>
557
- </Hit_hsps>
558
- </Hit>
559
- <Hit>
560
- <Hit_num>20</Hit_num>
561
- <Hit_id>gi|430766082|gb|AGA63038.1|</Hit_id>
562
- <Hit_def>tumor suppressor p53, partial [Homo sapiens]</Hit_def>
563
- <Hit_accession>AGA63038</Hit_accession>
564
- <Hit_len>99</Hit_len>
565
- <Hit_hsps>
566
- <Hsp>
567
- <Hsp_num>1</Hsp_num>
568
- <Hsp_bit-score>87.8113</Hsp_bit-score>
569
- <Hsp_score>216</Hsp_score>
570
- <Hsp_evalue>3.04616e-20</Hsp_evalue>
571
- <Hsp_query-from>1</Hsp_query-from>
572
- <Hsp_query-to>123</Hsp_query-to>
573
- <Hsp_hit-from>21</Hsp_hit-from>
574
- <Hsp_hit-to>61</Hsp_hit-to>
575
- <Hsp_query-frame>1</Hsp_query-frame>
576
- <Hsp_hit-frame>0</Hsp_hit-frame>
577
- <Hsp_identity>40</Hsp_identity>
578
- <Hsp_positive>41</Hsp_positive>
579
- <Hsp_gaps>0</Hsp_gaps>
580
- <Hsp_align-len>41</Hsp_align-len>
581
- <Hsp_qseq>WVDSTPPPGTRVRAVAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_qseq>
582
- <Hsp_hseq>WVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_hseq>
583
- <Hsp_midline>WVDSTPPPGTRVRA+AIYKQSQHMTEVVRRCPHHERCSDSD</Hsp_midline>
584
- </Hsp>
585
- </Hit_hsps>
586
- </Hit>
587
- </Iteration_hits>
588
- <Iteration_stat>
589
- <Statistics>
590
- <Statistics_db-num>206763544</Statistics_db-num>
591
- <Statistics_db-len>75193366533</Statistics_db-len>
592
- <Statistics_hsp-len>15</Statistics_hsp-len>
593
- <Statistics_eff-space>1874389747698</Statistics_eff-space>
594
- <Statistics_kappa>0.041</Statistics_kappa>
595
- <Statistics_lambda>0.267</Statistics_lambda>
596
- <Statistics_entropy>0.14</Statistics_entropy>
597
- </Statistics>
598
- </Iteration_stat>
599
- </Iteration>
600
- <Iteration>
601
- <Iteration_iter-num>2</Iteration_iter-num>
602
- <Iteration_query-ID>Query_2</Iteration_query-ID>
603
- <Iteration_query-def>NM_001861.5 Homo sapiens cytochrome c oxidase subunit 4I1 (COX4I1), transcript variant 1, mRNA</Iteration_query-def>
604
- <Iteration_query-len>749</Iteration_query-len>
605
- <Iteration_hits>
606
- <Hit>
607
- <Hit_num>1</Hit_num>
608
- <Hit_id>gi|4502981|ref|NP_001852.1|</Hit_id>
609
- <Hit_def>cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform 1 precursor [Homo sapiens] &gt;gi|353681773|ref|NP_001238844.1| cytochrome c oxidase subunit 4 isoform 1, mitochondrial [Pan troglodytes] &gt;gi|974005293|ref|NP_001305715.1| cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform 1 precursor [Homo sapiens] &gt;gi|397500380|ref|XP_003820894.1| cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X2 [Pan paniscus] &gt;gi|117086|sp|P13073.1|COX41_HUMAN RecName: Full=Cytochrome c oxidase subunit 4 isoform 1, mitochondrial; AltName: Full=Cytochrome c oxidase polypeptide IV; AltName: Full=Cytochrome c oxidase subunit IV isoform 1; Short=COX IV-1; Flags: Precursor &gt;gi|180933|gb|AAA99312.1| cytochrome c oxidase subunit IV precursor [Homo sapiens] &gt;gi|180935|gb|AAA52059.1| cytochrome c oxidase subunit IV (COX4) [Homo sapiens] &gt;gi|517252|emb|CAA38573.1| cytochrome-c oxidase subunit IV [Homo sapiens] &gt;gi|1913896|gb|AAB51058.1| cytochrome c oxidase subunit IV [Homo sapiens] &gt;gi|2738492|gb|AAB94819.1| cytochrome c oxidase subunit IV precursor [Homo sapiens] &gt;gi|4092857|gb|AAC99578.1| cytochrome c oxidase subunit IV precursor [Homo sapiens] &gt;gi|14250514|gb|AAH08704.1| Cytochrome c oxidase subunit IV isoform 1 [Homo sapiens] &gt;gi|18203795|gb|AAH21236.1| Cytochrome c oxidase subunit IV isoform 1 [Homo sapiens] &gt;gi|54696512|gb|AAV38628.1| cytochrome c oxidase subunit IV isoform 1 [Homo sapiens] &gt;gi|61357719|gb|AAX41434.1| cytochrome c oxidase subunit IV isoform 1 [synthetic construct] &gt;gi|119615843|gb|EAW95437.1| cytochrome c oxidase subunit IV isoform 1, isoform CRA_b [Homo sapiens] &gt;gi|119615844|gb|EAW95438.1| cytochrome c oxidase subunit IV isoform 1, isoform CRA_b [Homo sapiens] &gt;gi|123992973|gb|ABM84088.1| cytochrome c oxidase subunit IV isoform 1 [synthetic construct] &gt;gi|123999899|gb|ABM87458.1| cytochrome c oxidase subunit IV isoform 1, partial [synthetic construct] &gt;gi|189053167|dbj|BAG34789.1| unnamed protein product [Homo sapiens] &gt;gi|649099306|gb|AIC48546.1| COX4I1, partial [synthetic construct] &gt;gi|1147695033|emb|SJX40556.1| unnamed protein product, partial [Human ORFeome Gateway entry vector] &gt;gi|1331786218|gb|PNI45832.1| COX4I1 isoform 7 [Pan troglodytes] &gt;gi|1331786219|gb|PNI45833.1| COX4I1 isoform 8 [Pan troglodytes] &gt;gi|1331786220|gb|PNI45834.1| COX4I1 isoform 11 [Pan troglodytes] &gt;gi|225734|prf||1312293A cytochrome c oxidase IV</Hit_def>
610
- <Hit_accession>NP_001852</Hit_accession>
611
- <Hit_len>169</Hit_len>
612
- <Hit_hsps>
613
- <Hsp>
614
- <Hsp_num>1</Hsp_num>
615
- <Hsp_bit-score>350.517</Hsp_bit-score>
616
- <Hsp_score>898</Hsp_score>
617
- <Hsp_evalue>6.86588e-119</Hsp_evalue>
618
- <Hsp_query-from>60</Hsp_query-from>
619
- <Hsp_query-to>566</Hsp_query-to>
620
- <Hsp_hit-from>1</Hsp_hit-from>
621
- <Hsp_hit-to>169</Hsp_hit-to>
622
- <Hsp_query-frame>3</Hsp_query-frame>
623
- <Hsp_hit-frame>0</Hsp_hit-frame>
624
- <Hsp_identity>169</Hsp_identity>
625
- <Hsp_positive>169</Hsp_positive>
626
- <Hsp_gaps>0</Hsp_gaps>
627
- <Hsp_align-len>169</Hsp_align-len>
628
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
629
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
630
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
631
- </Hsp>
632
- </Hit_hsps>
633
- </Hit>
634
- <Hit>
635
- <Hit_num>2</Hit_num>
636
- <Hit_id>gi|397500384|ref|XP_003820896.1|</Hit_id>
637
- <Hit_def>cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1 [Pan paniscus] &gt;gi|694964928|ref|XP_009429631.1| cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1 [Pan troglodytes] &gt;gi|1370467949|ref|XP_024305924.1| cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1 [Homo sapiens]</Hit_def>
638
- <Hit_accession>XP_003820896</Hit_accession>
639
- <Hit_len>175</Hit_len>
640
- <Hit_hsps>
641
- <Hsp>
642
- <Hsp_num>1</Hsp_num>
643
- <Hsp_bit-score>350.517</Hsp_bit-score>
644
- <Hsp_score>898</Hsp_score>
645
- <Hsp_evalue>7.01628e-119</Hsp_evalue>
646
- <Hsp_query-from>60</Hsp_query-from>
647
- <Hsp_query-to>566</Hsp_query-to>
648
- <Hsp_hit-from>7</Hsp_hit-from>
649
- <Hsp_hit-to>175</Hsp_hit-to>
650
- <Hsp_query-frame>3</Hsp_query-frame>
651
- <Hsp_hit-frame>0</Hsp_hit-frame>
652
- <Hsp_identity>169</Hsp_identity>
653
- <Hsp_positive>169</Hsp_positive>
654
- <Hsp_gaps>0</Hsp_gaps>
655
- <Hsp_align-len>169</Hsp_align-len>
656
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
657
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
658
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
659
- </Hsp>
660
- </Hit_hsps>
661
- </Hit>
662
- <Hit>
663
- <Hit_num>3</Hit_num>
664
- <Hit_id>gi|38382823|gb|AAH62437.1|</Hit_id>
665
- <Hit_def>Cytochrome c oxidase subunit IV isoform 1 [Homo sapiens]</Hit_def>
666
- <Hit_accession>AAH62437</Hit_accession>
667
- <Hit_len>169</Hit_len>
668
- <Hit_hsps>
669
- <Hsp>
670
- <Hsp_num>1</Hsp_num>
671
- <Hsp_bit-score>348.977</Hsp_bit-score>
672
- <Hsp_score>894</Hsp_score>
673
- <Hsp_evalue>2.74712e-118</Hsp_evalue>
674
- <Hsp_query-from>60</Hsp_query-from>
675
- <Hsp_query-to>566</Hsp_query-to>
676
- <Hsp_hit-from>1</Hsp_hit-from>
677
- <Hsp_hit-to>169</Hsp_hit-to>
678
- <Hsp_query-frame>3</Hsp_query-frame>
679
- <Hsp_hit-frame>0</Hsp_hit-frame>
680
- <Hsp_identity>168</Hsp_identity>
681
- <Hsp_positive>168</Hsp_positive>
682
- <Hsp_gaps>0</Hsp_gaps>
683
- <Hsp_align-len>169</Hsp_align-len>
684
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
685
- <Hsp_hseq>MLTTRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
686
- <Hsp_midline>ML TRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
687
- </Hsp>
688
- </Hit_hsps>
689
- </Hit>
690
- <Hit>
691
- <Hit_num>4</Hit_num>
692
- <Hit_id>gi|426383129|ref|XP_004058144.1|</Hit_id>
693
- <Hit_def>PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial [Gorilla gorilla gorilla]</Hit_def>
694
- <Hit_accession>XP_004058144</Hit_accession>
695
- <Hit_len>169</Hit_len>
696
- <Hit_hsps>
697
- <Hsp>
698
- <Hsp_num>1</Hsp_num>
699
- <Hsp_bit-score>348.206</Hsp_bit-score>
700
- <Hsp_score>892</Hsp_score>
701
- <Hsp_evalue>4.39298e-118</Hsp_evalue>
702
- <Hsp_query-from>60</Hsp_query-from>
703
- <Hsp_query-to>566</Hsp_query-to>
704
- <Hsp_hit-from>1</Hsp_hit-from>
705
- <Hsp_hit-to>169</Hsp_hit-to>
706
- <Hsp_query-frame>3</Hsp_query-frame>
707
- <Hsp_hit-frame>0</Hsp_hit-frame>
708
- <Hsp_identity>168</Hsp_identity>
709
- <Hsp_positive>169</Hsp_positive>
710
- <Hsp_gaps>0</Hsp_gaps>
711
- <Hsp_align-len>169</Hsp_align-len>
712
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
713
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDYPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
714
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRD+PLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
715
- </Hsp>
716
- </Hit_hsps>
717
- </Hit>
718
- <Hit>
719
- <Hit_num>5</Hit_num>
720
- <Hit_id>gi|332246822|ref|XP_003272552.1|</Hit_id>
721
- <Hit_def>PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X2 [Nomascus leucogenys] &gt;gi|332246824|ref|XP_003272553.1| PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X2 [Nomascus leucogenys]</Hit_def>
722
- <Hit_accession>XP_003272552</Hit_accession>
723
- <Hit_len>169</Hit_len>
724
- <Hit_hsps>
725
- <Hsp>
726
- <Hsp_num>1</Hsp_num>
727
- <Hsp_bit-score>344.354</Hsp_bit-score>
728
- <Hsp_score>882</Hsp_score>
729
- <Hsp_evalue>1.47706e-116</Hsp_evalue>
730
- <Hsp_query-from>60</Hsp_query-from>
731
- <Hsp_query-to>566</Hsp_query-to>
732
- <Hsp_hit-from>1</Hsp_hit-from>
733
- <Hsp_hit-to>169</Hsp_hit-to>
734
- <Hsp_query-frame>3</Hsp_query-frame>
735
- <Hsp_hit-frame>0</Hsp_hit-frame>
736
- <Hsp_identity>163</Hsp_identity>
737
- <Hsp_positive>169</Hsp_positive>
738
- <Hsp_gaps>0</Hsp_gaps>
739
- <Hsp_align-len>169</Hsp_align-len>
740
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
741
- <Hsp_hseq>MLATRVFSLVGKRAVSTSVCVRAHESVMKSEDFSLPAYVDRRDHPLPEVAHVKHLSASQKALKEKEKAAWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALIIMWQKHYVYGPLPQTFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
742
- <Hsp_midline>MLATRVFSLVGKRA+STSVCVRAHESV+KSEDFSLPAY+DRRDHPLPEVAHVKHLSASQKALKEKEKA+WSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTAL+IMWQKHYVYGPLPQ+FDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
743
- </Hsp>
744
- </Hit_hsps>
745
- </Hit>
746
- <Hit>
747
- <Hit_num>6</Hit_num>
748
- <Hit_id>gi|332246826|ref|XP_003272554.1|</Hit_id>
749
- <Hit_def>PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1 [Nomascus leucogenys]</Hit_def>
750
- <Hit_accession>XP_003272554</Hit_accession>
751
- <Hit_len>175</Hit_len>
752
- <Hit_hsps>
753
- <Hsp>
754
- <Hsp_num>1</Hsp_num>
755
- <Hsp_bit-score>344.354</Hsp_bit-score>
756
- <Hsp_score>882</Hsp_score>
757
- <Hsp_evalue>1.93934e-116</Hsp_evalue>
758
- <Hsp_query-from>60</Hsp_query-from>
759
- <Hsp_query-to>566</Hsp_query-to>
760
- <Hsp_hit-from>7</Hsp_hit-from>
761
- <Hsp_hit-to>175</Hsp_hit-to>
762
- <Hsp_query-frame>3</Hsp_query-frame>
763
- <Hsp_hit-frame>0</Hsp_hit-frame>
764
- <Hsp_identity>163</Hsp_identity>
765
- <Hsp_positive>169</Hsp_positive>
766
- <Hsp_gaps>0</Hsp_gaps>
767
- <Hsp_align-len>169</Hsp_align-len>
768
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
769
- <Hsp_hseq>MLATRVFSLVGKRAVSTSVCVRAHESVMKSEDFSLPAYVDRRDHPLPEVAHVKHLSASQKALKEKEKAAWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALIIMWQKHYVYGPLPQTFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
770
- <Hsp_midline>MLATRVFSLVGKRA+STSVCVRAHESV+KSEDFSLPAY+DRRDHPLPEVAHVKHLSASQKALKEKEKA+WSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTAL+IMWQKHYVYGPLPQ+FDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
771
- </Hsp>
772
- </Hit_hsps>
773
- </Hit>
774
- <Hit>
775
- <Hit_num>7</Hit_num>
776
- <Hit_id>gi|197098966|ref|NP_001126477.1|</Hit_id>
777
- <Hit_def>cytochrome c oxidase subunit 4 isoform 1, mitochondrial [Pongo abelii] &gt;gi|55731628|emb|CAH92520.1| hypothetical protein [Pongo abelii] &gt;gi|1331881524|gb|PNJ29661.1| COX4I1 isoform 1 [Pongo abelii] &gt;gi|1331881525|gb|PNJ29662.1| COX4I1 isoform 5 [Pongo abelii] &gt;gi|1331881526|gb|PNJ29663.1| COX4I1 isoform 6 [Pongo abelii]</Hit_def>
778
- <Hit_accession>NP_001126477</Hit_accession>
779
- <Hit_len>169</Hit_len>
780
- <Hit_hsps>
781
- <Hsp>
782
- <Hsp_num>1</Hsp_num>
783
- <Hsp_bit-score>340.502</Hsp_bit-score>
784
- <Hsp_score>872</Hsp_score>
785
- <Hsp_evalue>5.53667e-115</Hsp_evalue>
786
- <Hsp_query-from>60</Hsp_query-from>
787
- <Hsp_query-to>566</Hsp_query-to>
788
- <Hsp_hit-from>1</Hsp_hit-from>
789
- <Hsp_hit-to>169</Hsp_hit-to>
790
- <Hsp_query-frame>3</Hsp_query-frame>
791
- <Hsp_hit-frame>0</Hsp_hit-frame>
792
- <Hsp_identity>164</Hsp_identity>
793
- <Hsp_positive>167</Hsp_positive>
794
- <Hsp_gaps>0</Hsp_gaps>
795
- <Hsp_align-len>169</Hsp_align-len>
796
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
797
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLSAYVDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALIIMWQKRHVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
798
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSL AY+DRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTAL+IMWQK +VYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
799
- </Hsp>
800
- </Hit_hsps>
801
- </Hit>
802
- <Hit>
803
- <Hit_num>8</Hit_num>
804
- <Hit_id>gi|724957535|ref|XP_010353910.1|</Hit_id>
805
- <Hit_def>PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial [Rhinopithecus roxellana]</Hit_def>
806
- <Hit_accession>XP_010353910</Hit_accession>
807
- <Hit_len>169</Hit_len>
808
- <Hit_hsps>
809
- <Hsp>
810
- <Hsp_num>1</Hsp_num>
811
- <Hsp_bit-score>333.183</Hsp_bit-score>
812
- <Hsp_score>853</Hsp_score>
813
- <Hsp_evalue>3.5798e-112</Hsp_evalue>
814
- <Hsp_query-from>60</Hsp_query-from>
815
- <Hsp_query-to>566</Hsp_query-to>
816
- <Hsp_hit-from>1</Hsp_hit-from>
817
- <Hsp_hit-to>169</Hsp_hit-to>
818
- <Hsp_query-frame>3</Hsp_query-frame>
819
- <Hsp_hit-frame>0</Hsp_hit-frame>
820
- <Hsp_identity>160</Hsp_identity>
821
- <Hsp_positive>165</Hsp_positive>
822
- <Hsp_gaps>0</Hsp_gaps>
823
- <Hsp_align-len>169</Hsp_align-len>
824
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
825
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKREDFSLPAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKETFAEMNRGSNEWKTVVGTAMFFIGFTALVIMWQKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
826
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVK EDFSLPAY+DRRD+PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKE+FAEMNRGSNEWKTVVG AMFFIGFTALVIMWQK YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
827
- </Hsp>
828
- </Hit_hsps>
829
- </Hit>
830
- <Hit>
831
- <Hit_num>9</Hit_num>
832
- <Hit_id>gi|795346036|ref|XP_011783438.1|</Hit_id>
833
- <Hit_def>PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial [Colobus angolensis palliatus]</Hit_def>
834
- <Hit_accession>XP_011783438</Hit_accession>
835
- <Hit_len>169</Hit_len>
836
- <Hit_hsps>
837
- <Hsp>
838
- <Hsp_num>1</Hsp_num>
839
- <Hsp_bit-score>332.798</Hsp_bit-score>
840
- <Hsp_score>852</Hsp_score>
841
- <Hsp_evalue>5.72317e-112</Hsp_evalue>
842
- <Hsp_query-from>60</Hsp_query-from>
843
- <Hsp_query-to>566</Hsp_query-to>
844
- <Hsp_hit-from>1</Hsp_hit-from>
845
- <Hsp_hit-to>169</Hsp_hit-to>
846
- <Hsp_query-frame>3</Hsp_query-frame>
847
- <Hsp_hit-frame>0</Hsp_hit-frame>
848
- <Hsp_identity>159</Hsp_identity>
849
- <Hsp_positive>165</Hsp_positive>
850
- <Hsp_gaps>0</Hsp_gaps>
851
- <Hsp_align-len>169</Hsp_align-len>
852
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
853
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKREDFSLPAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKETFAEMNRGSNEWKTVVGTAMFFIGFTALIIMWQKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
854
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVK EDFSLPAY+DRRD+PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKE+FAEMNRGSNEWKTVVG AMFFIGFTAL+IMWQK YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
855
- </Hsp>
856
- </Hit_hsps>
857
- </Hit>
858
- <Hit>
859
- <Hit_num>10</Hit_num>
860
- <Hit_id>gi|1059096511|ref|XP_017716062.1|</Hit_id>
861
- <Hit_def>PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial [Rhinopithecus bieti]</Hit_def>
862
- <Hit_accession>XP_017716062</Hit_accession>
863
- <Hit_len>285</Hit_len>
864
- <Hit_hsps>
865
- <Hsp>
866
- <Hsp_num>1</Hsp_num>
867
- <Hsp_bit-score>337.035</Hsp_bit-score>
868
- <Hsp_score>863</Hsp_score>
869
- <Hsp_evalue>7.03715e-112</Hsp_evalue>
870
- <Hsp_query-from>60</Hsp_query-from>
871
- <Hsp_query-to>566</Hsp_query-to>
872
- <Hsp_hit-from>117</Hsp_hit-from>
873
- <Hsp_hit-to>285</Hsp_hit-to>
874
- <Hsp_query-frame>3</Hsp_query-frame>
875
- <Hsp_hit-frame>0</Hsp_hit-frame>
876
- <Hsp_identity>160</Hsp_identity>
877
- <Hsp_positive>165</Hsp_positive>
878
- <Hsp_gaps>0</Hsp_gaps>
879
- <Hsp_align-len>169</Hsp_align-len>
880
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
881
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKREDFSLPAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKETFAEMNRGSNEWKTVVGTAMFFIGFTALVIMWQKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
882
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVK EDFSLPAY+DRRD+PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKE+FAEMNRGSNEWKTVVG AMFFIGFTALVIMWQK YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
883
- </Hsp>
884
- </Hit_hsps>
885
- </Hit>
886
- <Hit>
887
- <Hit_num>11</Hit_num>
888
- <Hit_id>gi|635034209|ref|XP_007992456.1|</Hit_id>
889
- <Hit_def>PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X2 [Chlorocebus sabaeus]</Hit_def>
890
- <Hit_accession>XP_007992456</Hit_accession>
891
- <Hit_len>169</Hit_len>
892
- <Hit_hsps>
893
- <Hsp>
894
- <Hsp_num>1</Hsp_num>
895
- <Hsp_bit-score>332.413</Hsp_bit-score>
896
- <Hsp_score>851</Hsp_score>
897
- <Hsp_evalue>8.47693e-112</Hsp_evalue>
898
- <Hsp_query-from>60</Hsp_query-from>
899
- <Hsp_query-to>566</Hsp_query-to>
900
- <Hsp_hit-from>1</Hsp_hit-from>
901
- <Hsp_hit-to>169</Hsp_hit-to>
902
- <Hsp_query-frame>3</Hsp_query-frame>
903
- <Hsp_hit-frame>0</Hsp_hit-frame>
904
- <Hsp_identity>159</Hsp_identity>
905
- <Hsp_positive>166</Hsp_positive>
906
- <Hsp_gaps>0</Hsp_gaps>
907
- <Hsp_align-len>169</Hsp_align-len>
908
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
909
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGTALFFIGFTALVVMWEKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
910
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAY+DRRD+PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVG A+FFIGFTALV+MW+K YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
911
- </Hsp>
912
- </Hit_hsps>
913
- </Hit>
914
- <Hit>
915
- <Hit_num>12</Hit_num>
916
- <Hit_id>gi|635034207|ref|XP_007992455.1|</Hit_id>
917
- <Hit_def>PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1 [Chlorocebus sabaeus]</Hit_def>
918
- <Hit_accession>XP_007992455</Hit_accession>
919
- <Hit_len>175</Hit_len>
920
- <Hit_hsps>
921
- <Hsp>
922
- <Hsp_num>1</Hsp_num>
923
- <Hsp_bit-score>332.413</Hsp_bit-score>
924
- <Hsp_score>851</Hsp_score>
925
- <Hsp_evalue>1.04143e-111</Hsp_evalue>
926
- <Hsp_query-from>60</Hsp_query-from>
927
- <Hsp_query-to>566</Hsp_query-to>
928
- <Hsp_hit-from>7</Hsp_hit-from>
929
- <Hsp_hit-to>175</Hsp_hit-to>
930
- <Hsp_query-frame>3</Hsp_query-frame>
931
- <Hsp_hit-frame>0</Hsp_hit-frame>
932
- <Hsp_identity>159</Hsp_identity>
933
- <Hsp_positive>166</Hsp_positive>
934
- <Hsp_gaps>0</Hsp_gaps>
935
- <Hsp_align-len>169</Hsp_align-len>
936
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
937
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGTALFFIGFTALVVMWEKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
938
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAY+DRRD+PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVG A+FFIGFTALV+MW+K YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
939
- </Hsp>
940
- </Hit_hsps>
941
- </Hit>
942
- <Hit>
943
- <Hit_num>13</Hit_num>
944
- <Hit_id>gi|795617343|ref|XP_011730216.1|</Hit_id>
945
- <Hit_def>cytochrome c oxidase subunit 4 isoform 1, mitochondrial-like [Macaca nemestrina]</Hit_def>
946
- <Hit_accession>XP_011730216</Hit_accession>
947
- <Hit_len>169</Hit_len>
948
- <Hit_hsps>
949
- <Hsp>
950
- <Hsp_num>1</Hsp_num>
951
- <Hsp_bit-score>331.257</Hsp_bit-score>
952
- <Hsp_score>848</Hsp_score>
953
- <Hsp_evalue>2.49678e-111</Hsp_evalue>
954
- <Hsp_query-from>60</Hsp_query-from>
955
- <Hsp_query-to>566</Hsp_query-to>
956
- <Hsp_hit-from>1</Hsp_hit-from>
957
- <Hsp_hit-to>169</Hsp_hit-to>
958
- <Hsp_query-frame>3</Hsp_query-frame>
959
- <Hsp_hit-frame>0</Hsp_hit-frame>
960
- <Hsp_identity>160</Hsp_identity>
961
- <Hsp_positive>165</Hsp_positive>
962
- <Hsp_gaps>0</Hsp_gaps>
963
- <Hsp_align-len>169</Hsp_align-len>
964
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
965
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRRSNEWKTVVGTAMFFIGFTALVIMWEKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
966
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAY+DRRD+PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR SNEWKTVVG AMFFIGFTALVIMW+K YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
967
- </Hsp>
968
- </Hit_hsps>
969
- </Hit>
970
- <Hit>
971
- <Hit_num>14</Hit_num>
972
- <Hit_id>gi|795470675|ref|XP_011890910.1|</Hit_id>
973
- <Hit_def>PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial [Cercocebus atys]</Hit_def>
974
- <Hit_accession>XP_011890910</Hit_accession>
975
- <Hit_len>169</Hit_len>
976
- <Hit_hsps>
977
- <Hsp>
978
- <Hsp_num>1</Hsp_num>
979
- <Hsp_bit-score>330.487</Hsp_bit-score>
980
- <Hsp_score>846</Hsp_score>
981
- <Hsp_evalue>5.01943e-111</Hsp_evalue>
982
- <Hsp_query-from>60</Hsp_query-from>
983
- <Hsp_query-to>566</Hsp_query-to>
984
- <Hsp_hit-from>1</Hsp_hit-from>
985
- <Hsp_hit-to>169</Hsp_hit-to>
986
- <Hsp_query-frame>3</Hsp_query-frame>
987
- <Hsp_hit-frame>0</Hsp_hit-frame>
988
- <Hsp_identity>159</Hsp_identity>
989
- <Hsp_positive>165</Hsp_positive>
990
- <Hsp_gaps>0</Hsp_gaps>
991
- <Hsp_align-len>169</Hsp_align-len>
992
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
993
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFTLPAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRRSNEWKTVVGTAMFFIGFTALVIMWEKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
994
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDF+LPAY+DRRD+PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR SNEWKTVVG AMFFIGFTALVIMW+K YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
995
- </Hsp>
996
- </Hit_hsps>
997
- </Hit>
998
- <Hit>
999
- <Hit_num>15</Hit_num>
1000
- <Hit_id>gi|402895796|ref|XP_003911001.1|</Hit_id>
1001
- <Hit_def>cytochrome c oxidase subunit 4 isoform 1, mitochondrial-like [Papio anubis]</Hit_def>
1002
- <Hit_accession>XP_003911001</Hit_accession>
1003
- <Hit_len>169</Hit_len>
1004
- <Hit_hsps>
1005
- <Hsp>
1006
- <Hsp_num>1</Hsp_num>
1007
- <Hsp_bit-score>330.487</Hsp_bit-score>
1008
- <Hsp_score>846</Hsp_score>
1009
- <Hsp_evalue>5.24334e-111</Hsp_evalue>
1010
- <Hsp_query-from>60</Hsp_query-from>
1011
- <Hsp_query-to>566</Hsp_query-to>
1012
- <Hsp_hit-from>1</Hsp_hit-from>
1013
- <Hsp_hit-to>169</Hsp_hit-to>
1014
- <Hsp_query-frame>3</Hsp_query-frame>
1015
- <Hsp_hit-frame>0</Hsp_hit-frame>
1016
- <Hsp_identity>159</Hsp_identity>
1017
- <Hsp_positive>165</Hsp_positive>
1018
- <Hsp_gaps>0</Hsp_gaps>
1019
- <Hsp_align-len>169</Hsp_align-len>
1020
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
1021
- <Hsp_hseq>MLATRVFSLVGKRAVSTSVCVRAHESVVKSEDFSLPAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRRSNEWKTVVGTAMFFIGFTALVIMWEKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
1022
- <Hsp_midline>MLATRVFSLVGKRA+STSVCVRAHESVVKSEDFSLPAY+DRRD+PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR SNEWKTVVG AMFFIGFTALVIMW+K YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
1023
- </Hsp>
1024
- </Hit_hsps>
1025
- </Hit>
1026
- <Hit>
1027
- <Hit_num>16</Hit_num>
1028
- <Hit_id>gi|1297693740|ref|XP_023084794.1|</Hit_id>
1029
- <Hit_def>cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1 [Piliocolobus tephrosceles]</Hit_def>
1030
- <Hit_accession>XP_023084794</Hit_accession>
1031
- <Hit_len>169</Hit_len>
1032
- <Hit_hsps>
1033
- <Hsp>
1034
- <Hsp_num>1</Hsp_num>
1035
- <Hsp_bit-score>329.717</Hsp_bit-score>
1036
- <Hsp_score>844</Hsp_score>
1037
- <Hsp_evalue>8.38234e-111</Hsp_evalue>
1038
- <Hsp_query-from>60</Hsp_query-from>
1039
- <Hsp_query-to>566</Hsp_query-to>
1040
- <Hsp_hit-from>1</Hsp_hit-from>
1041
- <Hsp_hit-to>169</Hsp_hit-to>
1042
- <Hsp_query-frame>3</Hsp_query-frame>
1043
- <Hsp_hit-frame>0</Hsp_hit-frame>
1044
- <Hsp_identity>158</Hsp_identity>
1045
- <Hsp_positive>163</Hsp_positive>
1046
- <Hsp_gaps>0</Hsp_gaps>
1047
- <Hsp_align-len>169</Hsp_align-len>
1048
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
1049
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCARAHEGVVKREDFSLPAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKETFAEMNRGSNEWKTVVGTAMFFIGFTALVIMWQKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
1050
- <Hsp_midline>MLATRVFSLVGKRAISTSVC RAHE VVK EDFSLPAY+DRRD+PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKE+FAEMNRGSNEWKTVVG AMFFIGFTALVIMWQK YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
1051
- </Hsp>
1052
- </Hit_hsps>
1053
- </Hit>
1054
- <Hit>
1055
- <Hit_num>17</Hit_num>
1056
- <Hit_id>gi|1411106847|ref|XP_025212666.1|</Hit_id>
1057
- <Hit_def>cytochrome c oxidase subunit 4 isoform 1, mitochondrial-like [Theropithecus gelada]</Hit_def>
1058
- <Hit_accession>XP_025212666</Hit_accession>
1059
- <Hit_len>169</Hit_len>
1060
- <Hit_hsps>
1061
- <Hsp>
1062
- <Hsp_num>1</Hsp_num>
1063
- <Hsp_bit-score>329.717</Hsp_bit-score>
1064
- <Hsp_score>844</Hsp_score>
1065
- <Hsp_evalue>9.34867e-111</Hsp_evalue>
1066
- <Hsp_query-from>60</Hsp_query-from>
1067
- <Hsp_query-to>566</Hsp_query-to>
1068
- <Hsp_hit-from>1</Hsp_hit-from>
1069
- <Hsp_hit-to>169</Hsp_hit-to>
1070
- <Hsp_query-frame>3</Hsp_query-frame>
1071
- <Hsp_hit-frame>0</Hsp_hit-frame>
1072
- <Hsp_identity>159</Hsp_identity>
1073
- <Hsp_positive>164</Hsp_positive>
1074
- <Hsp_gaps>0</Hsp_gaps>
1075
- <Hsp_align-len>169</Hsp_align-len>
1076
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
1077
- <Hsp_hseq>MLATRVFSLVGKRAVSTSVCVRAHESVVKSEDFSLPAYVDRRDCPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRSSNEWKTVVGTAMFFIGFTALVIMWEKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
1078
- <Hsp_midline>MLATRVFSLVGKRA+STSVCVRAHESVVKSEDFSLPAY+DRRD PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR SNEWKTVVG AMFFIGFTALVIMW+K YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
1079
- </Hsp>
1080
- </Hit_hsps>
1081
- </Hit>
1082
- <Hit>
1083
- <Hit_num>18</Hit_num>
1084
- <Hit_id>gi|795067150|ref|XP_011826905.1|</Hit_id>
1085
- <Hit_def>PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X2 [Mandrillus leucophaeus] &gt;gi|795067155|ref|XP_011826912.1| PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X2 [Mandrillus leucophaeus]</Hit_def>
1086
- <Hit_accession>XP_011826905</Hit_accession>
1087
- <Hit_len>169</Hit_len>
1088
- <Hit_hsps>
1089
- <Hsp>
1090
- <Hsp_num>1</Hsp_num>
1091
- <Hsp_bit-score>328.176</Hsp_bit-score>
1092
- <Hsp_score>840</Hsp_score>
1093
- <Hsp_evalue>3.90365e-110</Hsp_evalue>
1094
- <Hsp_query-from>60</Hsp_query-from>
1095
- <Hsp_query-to>566</Hsp_query-to>
1096
- <Hsp_hit-from>1</Hsp_hit-from>
1097
- <Hsp_hit-to>169</Hsp_hit-to>
1098
- <Hsp_query-frame>3</Hsp_query-frame>
1099
- <Hsp_hit-frame>0</Hsp_hit-frame>
1100
- <Hsp_identity>158</Hsp_identity>
1101
- <Hsp_positive>164</Hsp_positive>
1102
- <Hsp_gaps>0</Hsp_gaps>
1103
- <Hsp_align-len>169</Hsp_align-len>
1104
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
1105
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFTLPAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRRSNEWKTVVGTAMFFIGITALVIMWEKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
1106
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDF+LPAY+DRRD+PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR SNEWKTVVG AMFFIG TALVIMW+K YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
1107
- </Hsp>
1108
- </Hit_hsps>
1109
- </Hit>
1110
- <Hit>
1111
- <Hit_num>19</Hit_num>
1112
- <Hit_id>gi|544490916|ref|XP_005580214.1|</Hit_id>
1113
- <Hit_def>PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial-like [Macaca fascicularis]</Hit_def>
1114
- <Hit_accession>XP_005580214</Hit_accession>
1115
- <Hit_len>169</Hit_len>
1116
- <Hit_hsps>
1117
- <Hsp>
1118
- <Hsp_num>1</Hsp_num>
1119
- <Hsp_bit-score>327.791</Hsp_bit-score>
1120
- <Hsp_score>839</Hsp_score>
1121
- <Hsp_evalue>5.97392e-110</Hsp_evalue>
1122
- <Hsp_query-from>60</Hsp_query-from>
1123
- <Hsp_query-to>566</Hsp_query-to>
1124
- <Hsp_hit-from>1</Hsp_hit-from>
1125
- <Hsp_hit-to>169</Hsp_hit-to>
1126
- <Hsp_query-frame>3</Hsp_query-frame>
1127
- <Hsp_hit-frame>0</Hsp_hit-frame>
1128
- <Hsp_identity>159</Hsp_identity>
1129
- <Hsp_positive>164</Hsp_positive>
1130
- <Hsp_gaps>0</Hsp_gaps>
1131
- <Hsp_align-len>169</Hsp_align-len>
1132
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
1133
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRRWNEWKTVVGTAMFFIGFTALVIMWEKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
1134
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAY+DRRD+PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR NEWKTVVG AMFFIGFTALVIMW+K YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
1135
- </Hsp>
1136
- </Hit_hsps>
1137
- </Hit>
1138
- <Hit>
1139
- <Hit_num>20</Hit_num>
1140
- <Hit_id>gi|795564181|ref|XP_011908771.1|</Hit_id>
1141
- <Hit_def>PREDICTED: cytochrome c oxidase subunit 4 isoform 1, mitochondrial-like [Cercocebus atys]</Hit_def>
1142
- <Hit_accession>XP_011908771</Hit_accession>
1143
- <Hit_len>169</Hit_len>
1144
- <Hit_hsps>
1145
- <Hsp>
1146
- <Hsp_num>1</Hsp_num>
1147
- <Hsp_bit-score>327.02</Hsp_bit-score>
1148
- <Hsp_score>837</Hsp_score>
1149
- <Hsp_evalue>9.7605e-110</Hsp_evalue>
1150
- <Hsp_query-from>60</Hsp_query-from>
1151
- <Hsp_query-to>566</Hsp_query-to>
1152
- <Hsp_hit-from>1</Hsp_hit-from>
1153
- <Hsp_hit-to>169</Hsp_hit-to>
1154
- <Hsp_query-frame>3</Hsp_query-frame>
1155
- <Hsp_hit-frame>0</Hsp_hit-frame>
1156
- <Hsp_identity>159</Hsp_identity>
1157
- <Hsp_positive>164</Hsp_positive>
1158
- <Hsp_gaps>0</Hsp_gaps>
1159
- <Hsp_align-len>169</Hsp_align-len>
1160
- <Hsp_qseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_qseq>
1161
- <Hsp_hseq>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAYVDWRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRRSNEWKTVVGTAMFFIGFTALVIMWEKLYVYGPLPQTFDKEWVAMQTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_hseq>
1162
- <Hsp_midline>MLATRVFSLVGKRAISTSVCVRAHESVVKSEDFSLPAY+D RD+PLP+VAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR SNEWKTVVG AMFFIGFTALVIMW+K YVYGPLPQ+FDKEWVA QTKRMLDMKVNPIQGLASKWDYEKNEWKK</Hsp_midline>
1163
- </Hsp>
1164
- </Hit_hsps>
1165
- </Hit>
1166
- </Iteration_hits>
1167
- <Iteration_stat>
1168
- <Statistics>
1169
- <Statistics_db-num>206763544</Statistics_db-num>
1170
- <Statistics_db-len>75193366533</Statistics_db-len>
1171
- <Statistics_hsp-len>153</Statistics_hsp-len>
1172
- <Statistics_eff-space>4181620252896</Statistics_eff-space>
1173
- <Statistics_kappa>0.041</Statistics_kappa>
1174
- <Statistics_lambda>0.267</Statistics_lambda>
1175
- <Statistics_entropy>0.14</Statistics_entropy>
1176
- </Statistics>
1177
- </Iteration_stat>
1178
- </Iteration>
1179
- </BlastOutput_iterations>
1180
- </BlastOutput>
1181
-