rb-gsl 1.16.0.5 → 1.16.0.6

Sign up to get free protection for your applications and to get access to all the features.
Files changed (612) hide show
  1. checksums.yaml +4 -4
  2. data/rb-gsl.gemspec +5 -10
  3. metadata +10 -713
  4. data/.gitignore +0 -12
  5. data/.travis.yml +0 -24
  6. data/AUTHORS +0 -12
  7. data/COPYING +0 -341
  8. data/ChangeLog +0 -621
  9. data/Gemfile +0 -4
  10. data/README.md +0 -77
  11. data/Rakefile +0 -20
  12. data/THANKS +0 -17
  13. data/examples/alf/alf.gp +0 -15
  14. data/examples/alf/alf.rb +0 -32
  15. data/examples/blas/blas.rb +0 -13
  16. data/examples/blas/dnrm2.rb +0 -16
  17. data/examples/blas/level1.rb +0 -81
  18. data/examples/blas/level2.rb +0 -11
  19. data/examples/blas/level3.rb +0 -12
  20. data/examples/bspline.rb +0 -57
  21. data/examples/cdf.rb +0 -16
  22. data/examples/cheb.rb +0 -21
  23. data/examples/combination.rb +0 -23
  24. data/examples/complex/RC-lpf.rb +0 -47
  25. data/examples/complex/add.rb +0 -36
  26. data/examples/complex/coerce.rb +0 -14
  27. data/examples/complex/complex.rb +0 -25
  28. data/examples/complex/fpmi.rb +0 -70
  29. data/examples/complex/functions.rb +0 -77
  30. data/examples/complex/michelson.rb +0 -36
  31. data/examples/complex/mul.rb +0 -28
  32. data/examples/complex/oscillator.rb +0 -17
  33. data/examples/complex/set.rb +0 -37
  34. data/examples/const/physconst.rb +0 -151
  35. data/examples/const/travel.rb +0 -45
  36. data/examples/deriv/demo.rb +0 -13
  37. data/examples/deriv/deriv.rb +0 -36
  38. data/examples/deriv/diff.rb +0 -35
  39. data/examples/dht.rb +0 -42
  40. data/examples/dirac.rb +0 -56
  41. data/examples/eigen/eigen.rb +0 -34
  42. data/examples/eigen/herm.rb +0 -22
  43. data/examples/eigen/narray.rb +0 -9
  44. data/examples/eigen/nonsymm.rb +0 -37
  45. data/examples/eigen/nonsymmv.rb +0 -43
  46. data/examples/eigen/qhoscillator.gp +0 -35
  47. data/examples/eigen/qhoscillator.rb +0 -90
  48. data/examples/eigen/vander.rb +0 -41
  49. data/examples/fft/fft.rb +0 -17
  50. data/examples/fft/fft2.rb +0 -17
  51. data/examples/fft/forward.rb +0 -25
  52. data/examples/fft/forward2.rb +0 -26
  53. data/examples/fft/radix2.rb +0 -18
  54. data/examples/fft/real-halfcomplex.rb +0 -33
  55. data/examples/fft/real-halfcomplex2.rb +0 -30
  56. data/examples/fft/realradix2.rb +0 -19
  57. data/examples/fft/sunspot.dat +0 -256
  58. data/examples/fft/sunspot.rb +0 -16
  59. data/examples/fit/expdata.dat +0 -20
  60. data/examples/fit/expfit.rb +0 -31
  61. data/examples/fit/gaussfit.rb +0 -29
  62. data/examples/fit/gaussian_2peaks.rb +0 -34
  63. data/examples/fit/hillfit.rb +0 -40
  64. data/examples/fit/lognormal.rb +0 -26
  65. data/examples/fit/lorentzfit.rb +0 -22
  66. data/examples/fit/multifit.rb +0 -72
  67. data/examples/fit/ndlinear.rb +0 -133
  68. data/examples/fit/nonlinearfit.rb +0 -89
  69. data/examples/fit/plot.gp +0 -36
  70. data/examples/fit/polyfit.rb +0 -9
  71. data/examples/fit/powerfit.rb +0 -21
  72. data/examples/fit/sigmoidfit.rb +0 -40
  73. data/examples/fit/sinfit.rb +0 -22
  74. data/examples/fit/wlinear.rb +0 -46
  75. data/examples/fresnel.rb +0 -11
  76. data/examples/function/function.rb +0 -36
  77. data/examples/function/log.rb +0 -7
  78. data/examples/function/min.rb +0 -33
  79. data/examples/function/sin.rb +0 -10
  80. data/examples/function/synchrotron.rb +0 -18
  81. data/examples/gallery/butterfly.rb +0 -7
  82. data/examples/gallery/cayley.rb +0 -12
  83. data/examples/gallery/cornu.rb +0 -23
  84. data/examples/gallery/eight.rb +0 -11
  85. data/examples/gallery/koch.rb +0 -40
  86. data/examples/gallery/lemniscate.rb +0 -11
  87. data/examples/gallery/polar.rb +0 -11
  88. data/examples/gallery/rgplot/cossin.rb +0 -35
  89. data/examples/gallery/rgplot/rgplot.replaced +0 -0
  90. data/examples/gallery/rgplot/roesller.rb +0 -55
  91. data/examples/gallery/roesller.rb +0 -39
  92. data/examples/gallery/scarabaeus.rb +0 -14
  93. data/examples/histogram/cauchy.rb +0 -27
  94. data/examples/histogram/cauchy.sh +0 -2
  95. data/examples/histogram/exponential.rb +0 -19
  96. data/examples/histogram/gauss.rb +0 -16
  97. data/examples/histogram/gsl-histogram.rb +0 -40
  98. data/examples/histogram/histo2d.rb +0 -31
  99. data/examples/histogram/histo3d.rb +0 -34
  100. data/examples/histogram/histogram-pdf.rb +0 -27
  101. data/examples/histogram/histogram.rb +0 -26
  102. data/examples/histogram/integral.rb +0 -28
  103. data/examples/histogram/poisson.rb +0 -27
  104. data/examples/histogram/power.rb +0 -25
  105. data/examples/histogram/rebin.rb +0 -17
  106. data/examples/histogram/smp.dat +0 -5
  107. data/examples/histogram/xexp.rb +0 -21
  108. data/examples/integration/ahmed.rb +0 -21
  109. data/examples/integration/cosmology.rb +0 -75
  110. data/examples/integration/friedmann.gp +0 -16
  111. data/examples/integration/friedmann.rb +0 -35
  112. data/examples/integration/gamma-zeta.rb +0 -35
  113. data/examples/integration/integration.rb +0 -22
  114. data/examples/integration/qag.rb +0 -8
  115. data/examples/integration/qag2.rb +0 -14
  116. data/examples/integration/qag3.rb +0 -8
  117. data/examples/integration/qagi.rb +0 -28
  118. data/examples/integration/qagi2.rb +0 -49
  119. data/examples/integration/qagiu.rb +0 -29
  120. data/examples/integration/qagp.rb +0 -20
  121. data/examples/integration/qags.rb +0 -14
  122. data/examples/integration/qawc.rb +0 -18
  123. data/examples/integration/qawf.rb +0 -41
  124. data/examples/integration/qawo.rb +0 -29
  125. data/examples/integration/qaws.rb +0 -30
  126. data/examples/integration/qng.rb +0 -17
  127. data/examples/interp/demo.gp +0 -20
  128. data/examples/interp/demo.rb +0 -45
  129. data/examples/interp/interp.rb +0 -37
  130. data/examples/interp/points +0 -10
  131. data/examples/interp/spline.rb +0 -20
  132. data/examples/jacobi/deriv.rb +0 -40
  133. data/examples/jacobi/integrate.rb +0 -34
  134. data/examples/jacobi/interp.rb +0 -43
  135. data/examples/jacobi/jacobi.rb +0 -11
  136. data/examples/linalg/HH.rb +0 -15
  137. data/examples/linalg/HH_narray.rb +0 -13
  138. data/examples/linalg/LQ_solve.rb +0 -73
  139. data/examples/linalg/LU.rb +0 -84
  140. data/examples/linalg/LU2.rb +0 -31
  141. data/examples/linalg/LU_narray.rb +0 -24
  142. data/examples/linalg/PTLQ.rb +0 -47
  143. data/examples/linalg/QR.rb +0 -18
  144. data/examples/linalg/QRPT.rb +0 -47
  145. data/examples/linalg/QR_solve.rb +0 -78
  146. data/examples/linalg/QR_solve_narray.rb +0 -13
  147. data/examples/linalg/SV.rb +0 -16
  148. data/examples/linalg/SV_narray.rb +0 -12
  149. data/examples/linalg/SV_solve.rb +0 -49
  150. data/examples/linalg/chol.rb +0 -29
  151. data/examples/linalg/chol_narray.rb +0 -15
  152. data/examples/linalg/complex.rb +0 -57
  153. data/examples/linalg/invert_narray.rb +0 -10
  154. data/examples/math/const.rb +0 -67
  155. data/examples/math/elementary.rb +0 -35
  156. data/examples/math/functions.rb +0 -41
  157. data/examples/math/inf_nan.rb +0 -34
  158. data/examples/math/minmax.rb +0 -22
  159. data/examples/math/power.rb +0 -18
  160. data/examples/math/test.rb +0 -31
  161. data/examples/matrix/a.dat +0 -0
  162. data/examples/matrix/add.rb +0 -45
  163. data/examples/matrix/b.dat +0 -4
  164. data/examples/matrix/cat.rb +0 -31
  165. data/examples/matrix/colvectors.rb +0 -24
  166. data/examples/matrix/complex.rb +0 -41
  167. data/examples/matrix/det.rb +0 -29
  168. data/examples/matrix/diagonal.rb +0 -23
  169. data/examples/matrix/get_all.rb +0 -159
  170. data/examples/matrix/hilbert.rb +0 -31
  171. data/examples/matrix/iterator.rb +0 -19
  172. data/examples/matrix/matrix.rb +0 -57
  173. data/examples/matrix/minmax.rb +0 -53
  174. data/examples/matrix/mul.rb +0 -39
  175. data/examples/matrix/rand.rb +0 -20
  176. data/examples/matrix/read.rb +0 -29
  177. data/examples/matrix/rowcol.rb +0 -47
  178. data/examples/matrix/set.rb +0 -41
  179. data/examples/matrix/set_all.rb +0 -100
  180. data/examples/matrix/view.rb +0 -32
  181. data/examples/matrix/view_all.rb +0 -148
  182. data/examples/matrix/write.rb +0 -23
  183. data/examples/min.rb +0 -29
  184. data/examples/monte/miser.rb +0 -47
  185. data/examples/monte/monte.rb +0 -47
  186. data/examples/monte/plain.rb +0 -47
  187. data/examples/monte/vegas.rb +0 -46
  188. data/examples/multimin/bundle.rb +0 -66
  189. data/examples/multimin/cqp.rb +0 -109
  190. data/examples/multimin/fdfminimizer.rb +0 -40
  191. data/examples/multimin/fminimizer.rb +0 -41
  192. data/examples/multiroot/demo.rb +0 -36
  193. data/examples/multiroot/fdfsolver.rb +0 -50
  194. data/examples/multiroot/fsolver.rb +0 -33
  195. data/examples/multiroot/fsolver2.rb +0 -32
  196. data/examples/multiroot/fsolver3.rb +0 -26
  197. data/examples/narray/histogram.rb +0 -14
  198. data/examples/narray/mandel.rb +0 -27
  199. data/examples/narray/narray.rb +0 -28
  200. data/examples/narray/narray2.rb +0 -44
  201. data/examples/narray/sf.rb +0 -26
  202. data/examples/ntuple/create.rb +0 -17
  203. data/examples/ntuple/project.rb +0 -31
  204. data/examples/odeiv/binarysystem.gp +0 -23
  205. data/examples/odeiv/binarysystem.rb +0 -104
  206. data/examples/odeiv/demo.gp +0 -24
  207. data/examples/odeiv/demo.rb +0 -69
  208. data/examples/odeiv/demo2.gp +0 -26
  209. data/examples/odeiv/duffing.rb +0 -45
  210. data/examples/odeiv/frei1.rb +0 -109
  211. data/examples/odeiv/frei2.rb +0 -76
  212. data/examples/odeiv/legendre.rb +0 -52
  213. data/examples/odeiv/odeiv.rb +0 -32
  214. data/examples/odeiv/odeiv2.rb +0 -45
  215. data/examples/odeiv/oscillator.rb +0 -42
  216. data/examples/odeiv/sedov.rb +0 -97
  217. data/examples/odeiv/whitedwarf.gp +0 -40
  218. data/examples/odeiv/whitedwarf.rb +0 -158
  219. data/examples/ool/conmin.rb +0 -100
  220. data/examples/ool/gencan.rb +0 -99
  221. data/examples/ool/pgrad.rb +0 -100
  222. data/examples/ool/spg.rb +0 -100
  223. data/examples/pdf/bernoulli.rb +0 -5
  224. data/examples/pdf/beta.rb +0 -7
  225. data/examples/pdf/binomiral.rb +0 -10
  226. data/examples/pdf/cauchy.rb +0 -6
  227. data/examples/pdf/chisq.rb +0 -8
  228. data/examples/pdf/exponential.rb +0 -7
  229. data/examples/pdf/exppow.rb +0 -6
  230. data/examples/pdf/fdist.rb +0 -7
  231. data/examples/pdf/flat.rb +0 -7
  232. data/examples/pdf/gamma.rb +0 -8
  233. data/examples/pdf/gauss-tail.rb +0 -5
  234. data/examples/pdf/gauss.rb +0 -6
  235. data/examples/pdf/geometric.rb +0 -5
  236. data/examples/pdf/gumbel.rb +0 -6
  237. data/examples/pdf/hypergeometric.rb +0 -11
  238. data/examples/pdf/landau.rb +0 -5
  239. data/examples/pdf/laplace.rb +0 -7
  240. data/examples/pdf/logarithmic.rb +0 -5
  241. data/examples/pdf/logistic.rb +0 -6
  242. data/examples/pdf/lognormal.rb +0 -6
  243. data/examples/pdf/neg-binomiral.rb +0 -10
  244. data/examples/pdf/pareto.rb +0 -7
  245. data/examples/pdf/pascal.rb +0 -10
  246. data/examples/pdf/poisson.rb +0 -5
  247. data/examples/pdf/rayleigh-tail.rb +0 -6
  248. data/examples/pdf/rayleigh.rb +0 -6
  249. data/examples/pdf/tdist.rb +0 -6
  250. data/examples/pdf/weibull.rb +0 -8
  251. data/examples/permutation/ex1.rb +0 -22
  252. data/examples/permutation/permutation.rb +0 -16
  253. data/examples/poly/bell.rb +0 -6
  254. data/examples/poly/bessel.rb +0 -6
  255. data/examples/poly/cheb.rb +0 -6
  256. data/examples/poly/cheb_II.rb +0 -6
  257. data/examples/poly/cubic.rb +0 -9
  258. data/examples/poly/demo.rb +0 -20
  259. data/examples/poly/eval.rb +0 -28
  260. data/examples/poly/eval_derivs.rb +0 -14
  261. data/examples/poly/fit.rb +0 -21
  262. data/examples/poly/hermite.rb +0 -6
  263. data/examples/poly/poly.rb +0 -13
  264. data/examples/poly/quadratic.rb +0 -25
  265. data/examples/random/diffusion.rb +0 -34
  266. data/examples/random/gaussian.rb +0 -9
  267. data/examples/random/generator.rb +0 -27
  268. data/examples/random/hdsobol.rb +0 -21
  269. data/examples/random/poisson.rb +0 -9
  270. data/examples/random/qrng.rb +0 -19
  271. data/examples/random/randomwalk.rb +0 -37
  272. data/examples/random/randomwalk2d.rb +0 -19
  273. data/examples/random/rayleigh.rb +0 -36
  274. data/examples/random/rng.rb +0 -33
  275. data/examples/random/rngextra.rb +0 -14
  276. data/examples/roots/bisection.rb +0 -25
  277. data/examples/roots/brent.rb +0 -43
  278. data/examples/roots/demo.rb +0 -30
  279. data/examples/roots/newton.rb +0 -46
  280. data/examples/roots/recombination.gp +0 -11
  281. data/examples/roots/recombination.rb +0 -61
  282. data/examples/roots/steffenson.rb +0 -48
  283. data/examples/sf/ShiChi.rb +0 -6
  284. data/examples/sf/SiCi.rb +0 -6
  285. data/examples/sf/airy_Ai.rb +0 -8
  286. data/examples/sf/airy_Bi.rb +0 -8
  287. data/examples/sf/bessel_IK.rb +0 -12
  288. data/examples/sf/bessel_JY.rb +0 -13
  289. data/examples/sf/beta_inc.rb +0 -9
  290. data/examples/sf/clausen.rb +0 -6
  291. data/examples/sf/dawson.rb +0 -5
  292. data/examples/sf/debye.rb +0 -9
  293. data/examples/sf/dilog.rb +0 -6
  294. data/examples/sf/ellint.rb +0 -6
  295. data/examples/sf/expint.rb +0 -8
  296. data/examples/sf/fermi.rb +0 -10
  297. data/examples/sf/gamma_inc_P.rb +0 -9
  298. data/examples/sf/gegenbauer.rb +0 -8
  299. data/examples/sf/hyperg.rb +0 -7
  300. data/examples/sf/laguerre.rb +0 -19
  301. data/examples/sf/lambertW.rb +0 -5
  302. data/examples/sf/legendre_P.rb +0 -10
  303. data/examples/sf/lngamma.rb +0 -5
  304. data/examples/sf/psi.rb +0 -54
  305. data/examples/sf/sphbessel.gp +0 -27
  306. data/examples/sf/sphbessel.rb +0 -30
  307. data/examples/sf/synchrotron.rb +0 -5
  308. data/examples/sf/transport.rb +0 -10
  309. data/examples/sf/zetam1.rb +0 -5
  310. data/examples/siman.rb +0 -44
  311. data/examples/sort/heapsort.rb +0 -23
  312. data/examples/sort/heapsort_vector_complex.rb +0 -21
  313. data/examples/sort/sort.rb +0 -23
  314. data/examples/sort/sort2.rb +0 -16
  315. data/examples/stats/mean.rb +0 -17
  316. data/examples/stats/statistics.rb +0 -18
  317. data/examples/stats/test.rb +0 -9
  318. data/examples/sum.rb +0 -34
  319. data/examples/tamu_anova.rb +0 -18
  320. data/examples/vector/a.dat +0 -0
  321. data/examples/vector/add.rb +0 -56
  322. data/examples/vector/b.dat +0 -4
  323. data/examples/vector/c.dat +0 -3
  324. data/examples/vector/collect.rb +0 -26
  325. data/examples/vector/compare.rb +0 -28
  326. data/examples/vector/complex.rb +0 -51
  327. data/examples/vector/complex_get_all.rb +0 -85
  328. data/examples/vector/complex_set_all.rb +0 -131
  329. data/examples/vector/complex_view_all.rb +0 -77
  330. data/examples/vector/connect.rb +0 -22
  331. data/examples/vector/decimate.rb +0 -38
  332. data/examples/vector/diff.rb +0 -31
  333. data/examples/vector/filescan.rb +0 -17
  334. data/examples/vector/floor.rb +0 -23
  335. data/examples/vector/get_all.rb +0 -82
  336. data/examples/vector/gnuplot.rb +0 -38
  337. data/examples/vector/graph.rb +0 -28
  338. data/examples/vector/histogram.rb +0 -22
  339. data/examples/vector/linspace.rb +0 -24
  340. data/examples/vector/log.rb +0 -17
  341. data/examples/vector/logic.rb +0 -33
  342. data/examples/vector/logspace.rb +0 -25
  343. data/examples/vector/minmax.rb +0 -47
  344. data/examples/vector/mul.rb +0 -49
  345. data/examples/vector/narray.rb +0 -46
  346. data/examples/vector/read.rb +0 -29
  347. data/examples/vector/set.rb +0 -35
  348. data/examples/vector/set_all.rb +0 -121
  349. data/examples/vector/smpv.dat +0 -15
  350. data/examples/vector/test.rb +0 -43
  351. data/examples/vector/test_gslblock.rb +0 -58
  352. data/examples/vector/vector.rb +0 -110
  353. data/examples/vector/view.rb +0 -35
  354. data/examples/vector/view_all.rb +0 -73
  355. data/examples/vector/where.rb +0 -29
  356. data/examples/vector/write.rb +0 -24
  357. data/examples/vector/zip.rb +0 -34
  358. data/examples/wavelet/ecg.dat +0 -256
  359. data/examples/wavelet/wavelet1.rb +0 -50
  360. data/ext/gsl_native/alf.c +0 -206
  361. data/ext/gsl_native/array.c +0 -553
  362. data/ext/gsl_native/array_complex.c +0 -245
  363. data/ext/gsl_native/blas.c +0 -28
  364. data/ext/gsl_native/blas1.c +0 -733
  365. data/ext/gsl_native/blas2.c +0 -1088
  366. data/ext/gsl_native/blas3.c +0 -880
  367. data/ext/gsl_native/block.c +0 -40
  368. data/ext/gsl_native/block_source.h +0 -885
  369. data/ext/gsl_native/bspline.c +0 -122
  370. data/ext/gsl_native/bundle.c +0 -3
  371. data/ext/gsl_native/cdf.c +0 -740
  372. data/ext/gsl_native/cheb.c +0 -531
  373. data/ext/gsl_native/combination.c +0 -275
  374. data/ext/gsl_native/common.c +0 -293
  375. data/ext/gsl_native/complex.c +0 -1002
  376. data/ext/gsl_native/const.c +0 -331
  377. data/ext/gsl_native/const_additional.c +0 -99
  378. data/ext/gsl_native/cqp.c +0 -283
  379. data/ext/gsl_native/deriv.c +0 -187
  380. data/ext/gsl_native/dht.c +0 -353
  381. data/ext/gsl_native/diff.c +0 -164
  382. data/ext/gsl_native/dirac.c +0 -388
  383. data/ext/gsl_native/eigen.c +0 -2322
  384. data/ext/gsl_native/error.c +0 -193
  385. data/ext/gsl_native/extconf.rb +0 -118
  386. data/ext/gsl_native/fft.c +0 -1095
  387. data/ext/gsl_native/fit.c +0 -204
  388. data/ext/gsl_native/fresnel.c +0 -312
  389. data/ext/gsl_native/function.c +0 -518
  390. data/ext/gsl_native/geometry.c +0 -139
  391. data/ext/gsl_native/graph.c +0 -1590
  392. data/ext/gsl_native/gsl.c +0 -259
  393. data/ext/gsl_native/gsl_narray.c +0 -794
  394. data/ext/gsl_native/histogram.c +0 -1964
  395. data/ext/gsl_native/histogram2d.c +0 -1042
  396. data/ext/gsl_native/histogram3d.c +0 -884
  397. data/ext/gsl_native/histogram3d_source.c +0 -749
  398. data/ext/gsl_native/histogram_find.c +0 -99
  399. data/ext/gsl_native/histogram_oper.c +0 -150
  400. data/ext/gsl_native/ieee.c +0 -88
  401. data/ext/gsl_native/include/rb_gsl.h +0 -136
  402. data/ext/gsl_native/include/rb_gsl_array.h +0 -214
  403. data/ext/gsl_native/include/rb_gsl_cheb.h +0 -19
  404. data/ext/gsl_native/include/rb_gsl_common.h +0 -348
  405. data/ext/gsl_native/include/rb_gsl_complex.h +0 -25
  406. data/ext/gsl_native/include/rb_gsl_const.h +0 -23
  407. data/ext/gsl_native/include/rb_gsl_dirac.h +0 -6
  408. data/ext/gsl_native/include/rb_gsl_eigen.h +0 -17
  409. data/ext/gsl_native/include/rb_gsl_fft.h +0 -49
  410. data/ext/gsl_native/include/rb_gsl_fit.h +0 -23
  411. data/ext/gsl_native/include/rb_gsl_function.h +0 -23
  412. data/ext/gsl_native/include/rb_gsl_graph.h +0 -68
  413. data/ext/gsl_native/include/rb_gsl_histogram.h +0 -63
  414. data/ext/gsl_native/include/rb_gsl_histogram3d.h +0 -97
  415. data/ext/gsl_native/include/rb_gsl_integration.h +0 -17
  416. data/ext/gsl_native/include/rb_gsl_interp.h +0 -41
  417. data/ext/gsl_native/include/rb_gsl_linalg.h +0 -21
  418. data/ext/gsl_native/include/rb_gsl_math.h +0 -20
  419. data/ext/gsl_native/include/rb_gsl_odeiv.h +0 -18
  420. data/ext/gsl_native/include/rb_gsl_poly.h +0 -67
  421. data/ext/gsl_native/include/rb_gsl_rational.h +0 -30
  422. data/ext/gsl_native/include/rb_gsl_rng.h +0 -20
  423. data/ext/gsl_native/include/rb_gsl_root.h +0 -22
  424. data/ext/gsl_native/include/rb_gsl_sf.h +0 -110
  425. data/ext/gsl_native/include/rb_gsl_statistics.h +0 -17
  426. data/ext/gsl_native/include/rb_gsl_tensor.h +0 -43
  427. data/ext/gsl_native/include/rb_gsl_with_narray.h +0 -31
  428. data/ext/gsl_native/include/templates_off.h +0 -87
  429. data/ext/gsl_native/include/templates_on.h +0 -241
  430. data/ext/gsl_native/integration.c +0 -1154
  431. data/ext/gsl_native/interp.c +0 -499
  432. data/ext/gsl_native/jacobi.c +0 -733
  433. data/ext/gsl_native/linalg.c +0 -3915
  434. data/ext/gsl_native/linalg_complex.c +0 -726
  435. data/ext/gsl_native/math.c +0 -706
  436. data/ext/gsl_native/matrix.c +0 -36
  437. data/ext/gsl_native/matrix_complex.c +0 -1733
  438. data/ext/gsl_native/matrix_double.c +0 -557
  439. data/ext/gsl_native/matrix_int.c +0 -255
  440. data/ext/gsl_native/matrix_source.h +0 -2708
  441. data/ext/gsl_native/min.c +0 -219
  442. data/ext/gsl_native/monte.c +0 -978
  443. data/ext/gsl_native/multifit.c +0 -1862
  444. data/ext/gsl_native/multimin.c +0 -778
  445. data/ext/gsl_native/multimin_fsdf.c +0 -156
  446. data/ext/gsl_native/multiroots.c +0 -952
  447. data/ext/gsl_native/multiset.c +0 -210
  448. data/ext/gsl_native/ndlinear.c +0 -320
  449. data/ext/gsl_native/nmf.c +0 -171
  450. data/ext/gsl_native/nmf_wrap.c +0 -75
  451. data/ext/gsl_native/ntuple.c +0 -469
  452. data/ext/gsl_native/odeiv.c +0 -947
  453. data/ext/gsl_native/ool.c +0 -879
  454. data/ext/gsl_native/permutation.c +0 -598
  455. data/ext/gsl_native/poly.c +0 -39
  456. data/ext/gsl_native/poly2.c +0 -265
  457. data/ext/gsl_native/poly_source.h +0 -1871
  458. data/ext/gsl_native/qrng.c +0 -160
  459. data/ext/gsl_native/randist.c +0 -1848
  460. data/ext/gsl_native/rational.c +0 -480
  461. data/ext/gsl_native/rng.c +0 -595
  462. data/ext/gsl_native/root.c +0 -407
  463. data/ext/gsl_native/sf.c +0 -1446
  464. data/ext/gsl_native/sf_airy.c +0 -200
  465. data/ext/gsl_native/sf_bessel.c +0 -871
  466. data/ext/gsl_native/sf_clausen.c +0 -28
  467. data/ext/gsl_native/sf_coulomb.c +0 -206
  468. data/ext/gsl_native/sf_coupling.c +0 -121
  469. data/ext/gsl_native/sf_dawson.c +0 -29
  470. data/ext/gsl_native/sf_debye.c +0 -148
  471. data/ext/gsl_native/sf_dilog.c +0 -43
  472. data/ext/gsl_native/sf_elementary.c +0 -46
  473. data/ext/gsl_native/sf_ellint.c +0 -206
  474. data/ext/gsl_native/sf_elljac.c +0 -30
  475. data/ext/gsl_native/sf_erfc.c +0 -89
  476. data/ext/gsl_native/sf_exp.c +0 -169
  477. data/ext/gsl_native/sf_expint.c +0 -201
  478. data/ext/gsl_native/sf_fermi_dirac.c +0 -148
  479. data/ext/gsl_native/sf_gamma.c +0 -343
  480. data/ext/gsl_native/sf_gegenbauer.c +0 -97
  481. data/ext/gsl_native/sf_hyperg.c +0 -203
  482. data/ext/gsl_native/sf_laguerre.c +0 -113
  483. data/ext/gsl_native/sf_lambert.c +0 -47
  484. data/ext/gsl_native/sf_legendre.c +0 -368
  485. data/ext/gsl_native/sf_log.c +0 -105
  486. data/ext/gsl_native/sf_mathieu.c +0 -235
  487. data/ext/gsl_native/sf_power.c +0 -47
  488. data/ext/gsl_native/sf_psi.c +0 -89
  489. data/ext/gsl_native/sf_synchrotron.c +0 -48
  490. data/ext/gsl_native/sf_transport.c +0 -76
  491. data/ext/gsl_native/sf_trigonometric.c +0 -210
  492. data/ext/gsl_native/sf_zeta.c +0 -115
  493. data/ext/gsl_native/signal.c +0 -303
  494. data/ext/gsl_native/siman.c +0 -713
  495. data/ext/gsl_native/sort.c +0 -207
  496. data/ext/gsl_native/spline.c +0 -377
  497. data/ext/gsl_native/stats.c +0 -787
  498. data/ext/gsl_native/sum.c +0 -168
  499. data/ext/gsl_native/tamu_anova.c +0 -56
  500. data/ext/gsl_native/tensor.c +0 -35
  501. data/ext/gsl_native/tensor_source.h +0 -1122
  502. data/ext/gsl_native/vector.c +0 -35
  503. data/ext/gsl_native/vector_complex.c +0 -2241
  504. data/ext/gsl_native/vector_double.c +0 -1433
  505. data/ext/gsl_native/vector_int.c +0 -202
  506. data/ext/gsl_native/vector_source.h +0 -3321
  507. data/ext/gsl_native/wavelet.c +0 -923
  508. data/lib/gsl.rb +0 -8
  509. data/lib/gsl/gnuplot.rb +0 -41
  510. data/lib/gsl/oper.rb +0 -43
  511. data/lib/gsl/version.rb +0 -3
  512. data/lib/ool.rb +0 -22
  513. data/lib/ool/conmin.rb +0 -30
  514. data/lib/rbgsl.rb +0 -1
  515. data/rdoc/alf.rdoc +0 -77
  516. data/rdoc/blas.rdoc +0 -269
  517. data/rdoc/bspline.rdoc +0 -42
  518. data/rdoc/changes.rdoc +0 -159
  519. data/rdoc/cheb.rdoc +0 -99
  520. data/rdoc/cholesky_complex.rdoc +0 -46
  521. data/rdoc/combi.rdoc +0 -125
  522. data/rdoc/complex.rdoc +0 -210
  523. data/rdoc/const.rdoc +0 -546
  524. data/rdoc/dht.rdoc +0 -122
  525. data/rdoc/diff.rdoc +0 -133
  526. data/rdoc/ehandling.rdoc +0 -50
  527. data/rdoc/eigen.rdoc +0 -401
  528. data/rdoc/fft.rdoc +0 -535
  529. data/rdoc/fit.rdoc +0 -284
  530. data/rdoc/function.rdoc +0 -94
  531. data/rdoc/graph.rdoc +0 -137
  532. data/rdoc/hist.rdoc +0 -409
  533. data/rdoc/hist2d.rdoc +0 -279
  534. data/rdoc/hist3d.rdoc +0 -112
  535. data/rdoc/integration.rdoc +0 -398
  536. data/rdoc/interp.rdoc +0 -231
  537. data/rdoc/intro.rdoc +0 -27
  538. data/rdoc/linalg.rdoc +0 -681
  539. data/rdoc/linalg_complex.rdoc +0 -88
  540. data/rdoc/math.rdoc +0 -276
  541. data/rdoc/matrix.rdoc +0 -1093
  542. data/rdoc/min.rdoc +0 -189
  543. data/rdoc/monte.rdoc +0 -234
  544. data/rdoc/multimin.rdoc +0 -312
  545. data/rdoc/multiroot.rdoc +0 -293
  546. data/rdoc/narray.rdoc +0 -177
  547. data/rdoc/ndlinear.rdoc +0 -250
  548. data/rdoc/nonlinearfit.rdoc +0 -348
  549. data/rdoc/ntuple.rdoc +0 -88
  550. data/rdoc/odeiv.rdoc +0 -378
  551. data/rdoc/perm.rdoc +0 -221
  552. data/rdoc/poly.rdoc +0 -335
  553. data/rdoc/qrng.rdoc +0 -90
  554. data/rdoc/randist.rdoc +0 -233
  555. data/rdoc/ref.rdoc +0 -93
  556. data/rdoc/rng.rdoc +0 -203
  557. data/rdoc/roots.rdoc +0 -305
  558. data/rdoc/sf.rdoc +0 -1622
  559. data/rdoc/siman.rdoc +0 -89
  560. data/rdoc/sort.rdoc +0 -94
  561. data/rdoc/start.rdoc +0 -16
  562. data/rdoc/stats.rdoc +0 -219
  563. data/rdoc/sum.rdoc +0 -65
  564. data/rdoc/tensor.rdoc +0 -251
  565. data/rdoc/tut.rdoc +0 -5
  566. data/rdoc/use.rdoc +0 -177
  567. data/rdoc/vector.rdoc +0 -1243
  568. data/rdoc/vector_complex.rdoc +0 -347
  569. data/rdoc/wavelet.rdoc +0 -218
  570. data/test/gsl/blas_test.rb +0 -79
  571. data/test/gsl/bspline_test.rb +0 -63
  572. data/test/gsl/cdf_test.rb +0 -1512
  573. data/test/gsl/cheb_test.rb +0 -80
  574. data/test/gsl/combination_test.rb +0 -100
  575. data/test/gsl/complex_test.rb +0 -20
  576. data/test/gsl/const_test.rb +0 -29
  577. data/test/gsl/deriv_test.rb +0 -62
  578. data/test/gsl/dht_test.rb +0 -79
  579. data/test/gsl/diff_test.rb +0 -53
  580. data/test/gsl/eigen_test.rb +0 -563
  581. data/test/gsl/err_test.rb +0 -23
  582. data/test/gsl/fit_test.rb +0 -101
  583. data/test/gsl/histo_test.rb +0 -14
  584. data/test/gsl/index_test.rb +0 -61
  585. data/test/gsl/integration_test.rb +0 -274
  586. data/test/gsl/interp_test.rb +0 -27
  587. data/test/gsl/linalg_test.rb +0 -463
  588. data/test/gsl/matrix_nmf_test.rb +0 -37
  589. data/test/gsl/matrix_test.rb +0 -98
  590. data/test/gsl/min_test.rb +0 -89
  591. data/test/gsl/monte_test.rb +0 -77
  592. data/test/gsl/multifit_test.rb +0 -753
  593. data/test/gsl/multimin_test.rb +0 -157
  594. data/test/gsl/multiroot_test.rb +0 -135
  595. data/test/gsl/multiset_test.rb +0 -52
  596. data/test/gsl/odeiv_test.rb +0 -275
  597. data/test/gsl/oper_test.rb +0 -98
  598. data/test/gsl/poly_test.rb +0 -338
  599. data/test/gsl/qrng_test.rb +0 -94
  600. data/test/gsl/quartic_test.rb +0 -28
  601. data/test/gsl/randist_test.rb +0 -122
  602. data/test/gsl/rng_test.rb +0 -303
  603. data/test/gsl/roots_test.rb +0 -78
  604. data/test/gsl/sf_test.rb +0 -2079
  605. data/test/gsl/stats_test.rb +0 -122
  606. data/test/gsl/sum_test.rb +0 -69
  607. data/test/gsl/tensor_test.rb +0 -396
  608. data/test/gsl/vector_test.rb +0 -223
  609. data/test/gsl/wavelet_test.rb +0 -130
  610. data/test/gsl_test.rb +0 -321
  611. data/test/test_helper.rb +0 -42
  612. data/uncrustify.cfg +0 -1693
@@ -1,171 +0,0 @@
1
- /**
2
- * NMF: Non-Negative Matrix Factorization
3
- *
4
- * Written by Roman Shterenzon
5
- * (Slightly modified by Y.Tsunesada: just added "const" qualifiers etc.)
6
- */
7
-
8
- #include <math.h>
9
- #include <time.h>
10
- #include <gsl/gsl_matrix.h>
11
- #include <gsl/gsl_blas.h> /* for multiplication */
12
-
13
- #define THRESH 0.000001
14
- #define MAXITER 1000
15
-
16
- #undef DEBUG
17
-
18
- #define mm(a, b) gsl_matrix_mult(a, b)
19
- //gsl_matrix * gsl_matrix_mult(gsl_matrix *a, gsl_matrix *b)
20
- gsl_matrix * gsl_matrix_mult(const gsl_matrix *a, const gsl_matrix *b)
21
- {
22
- gsl_matrix *c;
23
- c = gsl_matrix_alloc(a->size1, b->size2);
24
-
25
- gsl_blas_dgemm(CblasNoTrans, CblasNoTrans, 1.0, a, b, 0.0, c);
26
- return c;
27
- }
28
-
29
- // pretty print
30
- //void pp(gsl_matrix *m)
31
- void pp(const gsl_matrix *m)
32
- {
33
- int r, c;
34
-
35
- for(r = 0; r < (int) m->size1; r++) {
36
- for(c = 0; c < (int) m->size2; c++) {
37
- printf(" %.2f", gsl_matrix_get(m, r, c));
38
- }
39
- printf("\n");
40
- }
41
- }
42
-
43
- /* Returns a distance cost */
44
- //double difcost(gsl_matrix *a, gsl_matrix *b)
45
- double difcost(const gsl_matrix *a, const gsl_matrix *b)
46
- {
47
- int i, j;
48
- double dif = 0, d;
49
-
50
- for (i = 0; i < (int) a->size1; i++)
51
- {
52
- for (j = 0; j < (int) a->size2; j++)
53
- {
54
- d = gsl_matrix_get(a, i, j) - gsl_matrix_get(b, i, j);
55
- dif += d*d;
56
- // dif += pow(gsl_matrix_get(a, i, j) - gsl_matrix_get(b, i, j), 2);
57
- }
58
- }
59
- return dif;
60
- }
61
-
62
- static void initmatrix(gsl_matrix *m, double min, double max)
63
- {
64
- int i,j;
65
- double val;
66
-
67
- srand(time(NULL));
68
-
69
- for(i = 0; i < (int) m->size1; i++)
70
- {
71
- for(j = 0; j < (int) m->size2; j++)
72
- {
73
- val = min + (int) (max * (rand() / (RAND_MAX + min)));
74
- gsl_matrix_set(m, i, j, val);
75
- }
76
- }
77
- }
78
-
79
- static double update(gsl_matrix *v, gsl_matrix *w, gsl_matrix *h)
80
- {
81
- double dist = 0;
82
- gsl_matrix *wt = NULL, *ht = NULL, *wh = NULL;
83
- gsl_matrix *w_h = NULL, *wt_w = NULL;
84
- gsl_matrix *wt_v = NULL;
85
- gsl_matrix *v_ht = NULL, *wt_w_h = NULL, *w_h_ht = NULL;
86
-
87
- wt = gsl_matrix_alloc(w->size2, w->size1);
88
- gsl_matrix_transpose_memcpy(wt, w);
89
- ht = gsl_matrix_alloc(h->size2, h->size1);
90
- gsl_matrix_transpose_memcpy(ht, h);
91
-
92
- // wt * v
93
- wt_v = mm(wt, v);
94
-
95
- // wt * w * h
96
- wt_w = mm(wt, w);
97
- wt_w_h = mm(wt_w, h);
98
- gsl_matrix_free(wt_w);
99
-
100
- // h = h.mul_elements(wt * v).div_elements(wt * w * h)
101
- gsl_matrix_mul_elements(h, wt_v);
102
- gsl_matrix_div_elements(h, wt_w_h);
103
- gsl_matrix_free(wt_v);
104
- gsl_matrix_free(wt_w_h);
105
-
106
- // v * ht
107
- v_ht = mm(v, ht);
108
-
109
- // w * h * ht
110
- w_h = mm(w, h);
111
- w_h_ht = mm(w_h, ht);
112
- gsl_matrix_free(w_h);
113
-
114
- // w = w.mul_elements(v * ht).div_elements(w * h * ht)
115
- gsl_matrix_mul_elements(w, v_ht);
116
- gsl_matrix_div_elements(w, w_h_ht);
117
- gsl_matrix_free(v_ht);
118
- gsl_matrix_free(w_h_ht);
119
-
120
- gsl_matrix_free(wt);
121
- gsl_matrix_free(ht);
122
-
123
- wh = mm(w, h);
124
- dist = difcost(v, wh);
125
- gsl_matrix_free(wh);
126
-
127
- // w and h were modified in place
128
- return dist;
129
- }
130
-
131
- /* The main thing - compute the nmf */
132
- int gsl_matrix_nmf(gsl_matrix *v, int cols, gsl_matrix **w, gsl_matrix **h)
133
- {
134
- double dist = 1;
135
- int iter = 1;
136
- double min, max;
137
-
138
- #ifdef DEBUG
139
- printf("\nCols: %d\nv:\n", cols);
140
- pp(v);
141
- #endif
142
-
143
- gsl_matrix_minmax(v, &min, &max);
144
-
145
- #ifdef DEBUG
146
- printf("Min: %f, Max: %f\n", min, max);
147
- #endif
148
- *w = gsl_matrix_alloc(v->size1, cols);
149
- initmatrix(*w, min, max/2); // the multiplicative rules tend to increase w
150
-
151
- *h = gsl_matrix_alloc(cols, v->size2);
152
- initmatrix(*h, min, max);
153
-
154
- while(dist >= THRESH && iter < MAXITER)
155
- {
156
- dist = update(v, *w, *h);
157
- #ifdef DEBUG
158
- printf("Iteration: %d, distance: %f\n", iter, dist);
159
- printf("\nw:\n");
160
- pp(*w);
161
- printf("\nh:\n");
162
- pp(*h);
163
- printf("\n");
164
- #endif
165
- iter++;
166
- }
167
- #ifdef DEBUG
168
- printf("Ended\n");
169
- #endif
170
- return GSL_SUCCESS;
171
- }
@@ -1,75 +0,0 @@
1
- /**
2
- * NMF: Non-Negative Matrix Factorization - Ruby wrapper
3
- *
4
- * Written by Roman Shterenzon
5
- *
6
- */
7
-
8
- #include <ruby.h>
9
- #include <gsl/gsl_matrix.h>
10
-
11
- int gsl_matrix_nmf(gsl_matrix *v, int cols, gsl_matrix **w, gsl_matrix **h);
12
- //double difcost(gsl_matrix *a, gsl_matrix *b);
13
- double difcost(const gsl_matrix *a, const gsl_matrix *b);
14
-
15
- //VALUE mNMF;
16
- static VALUE mNMF;
17
- extern VALUE cgsl_matrix;
18
-
19
- /*
20
- * call-seq:
21
- * nmf(GSL::Matrix, columns) -> [GSL::Matrix, GSL::Matrix]
22
- *
23
- * Calculates the NMF of the given +matrix+, returns the W and H matrices
24
- */
25
- static VALUE nmf_wrap(VALUE obj, VALUE matrix, VALUE cols)
26
- {
27
- gsl_matrix *w, *h, *m;
28
- unsigned int c;
29
- VALUE arr;
30
-
31
- if ( !FIXNUM_P(cols) || (c = NUM2INT(cols)) <= 0 ) {
32
- rb_raise(rb_eArgError, "Number of columns should be a positive integer.");
33
- }
34
- arr = rb_ary_new2(2);
35
- Data_Get_Struct(matrix, gsl_matrix, m);
36
-
37
- /* compute the NMF */
38
- gsl_matrix_nmf(m, c, &w, &h);
39
-
40
- rb_ary_push(arr, Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, w));
41
- rb_ary_push(arr, Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, h));
42
-
43
- return arr;
44
- }
45
-
46
- /*
47
- * call-seq:
48
- * difcost(GSL::Matrix, GSL::Matrix) -> Float
49
- *
50
- * Calculates the geometric distance between two matrices
51
- */
52
- static VALUE difcost_wrap(VALUE obj, VALUE matrix1, VALUE matrix2)
53
- {
54
- gsl_matrix *m1, *m2;
55
- Data_Get_Struct(matrix1, gsl_matrix, m1);
56
- Data_Get_Struct(matrix2, gsl_matrix, m2);
57
- return rb_float_new(difcost(m1, m2));
58
- }
59
-
60
- /* call-seq:
61
- * nmf(cols) -> [GSL::Matrix, GSL::Matrix]
62
- */
63
- static VALUE matrix_nmf(VALUE obj, VALUE cols)
64
- {
65
- // nmf_wrap(cgsl_matrix, obj, cols);
66
- return nmf_wrap(cgsl_matrix, obj, cols);
67
- }
68
-
69
- void Init_gsl_matrix_nmf(void) {
70
- mNMF = rb_define_module_under(cgsl_matrix, "NMF");
71
-
72
- rb_define_singleton_method(mNMF, "nmf", nmf_wrap, 2);
73
- rb_define_singleton_method(mNMF, "difcost", difcost_wrap, 2);
74
- rb_define_method(cgsl_matrix, "nmf", matrix_nmf, 1);
75
- }
@@ -1,469 +0,0 @@
1
- /*
2
- ntuple.c
3
- Ruby/GSL: Ruby extension library for GSL (GNU Scientific Library)
4
- (C) Copyright 2001-2006 by Yoshiki Tsunesada
5
-
6
- Ruby/GSL is free software: you can redistribute it and/or modify it
7
- under the terms of the GNU General Public License.
8
- This library is distributed in the hope that it will be useful, but
9
- WITHOUT ANY WARRANTY.
10
- */
11
-
12
- #include "include/rb_gsl.h"
13
- #include "include/rb_gsl_array.h"
14
- #include "include/rb_gsl_function.h"
15
- #include "include/rb_gsl_histogram.h"
16
- #include <gsl/gsl_ntuple.h>
17
-
18
- static VALUE cgsl_ntuple;
19
- static VALUE cgsl_ntuple_select_fn;
20
- static VALUE cgsl_ntuple_value_fn;
21
-
22
- static VALUE rb_gsl_ntuple_new(int argc, VALUE *argv, VALUE klass)
23
- {
24
- gsl_vector *v = NULL;
25
- gsl_matrix *m = NULL;
26
- gsl_ntuple *n = NULL;
27
- double *data = NULL;
28
- size_t size;
29
- switch (argc) {
30
- case 2:
31
- case 3:
32
- if (VECTOR_P(argv[1])) {
33
- Data_Get_Struct(argv[1], gsl_vector, v);
34
- data = v->data;
35
- size = v->size;
36
- } else if (MATRIX_P(argv[1])) {
37
- Data_Get_Struct(argv[1], gsl_matrix, m);
38
- data = m->data;
39
- size = m->size1*m->size2;
40
- } else {
41
- rb_raise(rb_eTypeError, "Vector or Matrix expected");
42
- }
43
- if (argc == 3) size = FIX2INT(argv[2]);
44
- break;
45
- default:
46
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 2 or 3)", argc);
47
- break;
48
- }
49
- n = gsl_ntuple_create(STR2CSTR(argv[0]), data, size*sizeof(double));
50
- return Data_Wrap_Struct(klass, 0, gsl_ntuple_close, n);
51
- }
52
-
53
- VALUE rb_gsl_ntuple_open(int argc, VALUE *argv, VALUE klass)
54
- {
55
- gsl_vector *v = NULL;
56
- gsl_matrix *m = NULL;
57
- gsl_ntuple *n = NULL;
58
- double *data = NULL;
59
- size_t size;
60
- switch (argc) {
61
- case 2:
62
- case 3:
63
- if (VECTOR_P(argv[1])) {
64
- Data_Get_Struct(argv[1], gsl_vector, v);
65
- data = v->data;
66
- size = v->size;
67
- } else if (MATRIX_P(argv[1])) {
68
- Data_Get_Struct(argv[1], gsl_matrix, m);
69
- data = m->data;
70
- size = m->size1*m->size2;
71
- } else {
72
- rb_raise(rb_eTypeError, "Vector or Matrix expected");
73
- }
74
- if (argc == 3) size = FIX2INT(argv[2]);
75
- break;
76
- default:
77
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 2 or 3)", argc);
78
- break;
79
- }
80
- n = gsl_ntuple_open(STR2CSTR(argv[0]), data, size*sizeof(double));
81
- return Data_Wrap_Struct(klass, 0, gsl_ntuple_close, n);
82
- }
83
-
84
- VALUE rb_gsl_ntuple_write(VALUE obj)
85
- {
86
- gsl_ntuple *n = NULL;
87
- Data_Get_Struct(obj, gsl_ntuple, n);
88
- gsl_ntuple_write(n);
89
- return obj;
90
- }
91
-
92
- VALUE rb_gsl_ntuple_bookdata(VALUE obj)
93
- {
94
- gsl_ntuple *n = NULL;
95
- Data_Get_Struct(obj, gsl_ntuple, n);
96
- gsl_ntuple_bookdata(n);
97
- return obj;
98
- }
99
-
100
- VALUE rb_gsl_ntuple_read(VALUE obj)
101
- {
102
- gsl_ntuple *n = NULL;
103
- Data_Get_Struct(obj, gsl_ntuple, n);
104
- gsl_ntuple_read(n);
105
- return obj;
106
- }
107
-
108
- VALUE rb_gsl_ntuple_close(VALUE klass, VALUE obj)
109
- {
110
- gsl_ntuple *n = NULL;
111
- Data_Get_Struct(obj, gsl_ntuple, n);
112
- gsl_ntuple_close(n);
113
- return Qnil;
114
- }
115
-
116
- VALUE rb_gsl_ntuple_size(VALUE klass, VALUE obj)
117
- {
118
- gsl_ntuple *n = NULL;
119
- Data_Get_Struct(obj, gsl_ntuple, n);
120
- return INT2FIX(n->size);
121
- }
122
-
123
- VALUE rb_gsl_ntuple_data(VALUE obj)
124
- {
125
- gsl_ntuple *n = NULL;
126
- gsl_vector_view *v = NULL;
127
- Data_Get_Struct(obj, gsl_ntuple, n);
128
- v = gsl_vector_view_alloc();
129
- v->vector.size = n->size;
130
- v->vector.data = n->ntuple_data;
131
- return Data_Wrap_Struct(cgsl_vector_view, 0, gsl_vector_view_free, v);
132
- }
133
-
134
- /***** select_fn *****/
135
-
136
- static gsl_ntuple_select_fn* gsl_ntuple_select_fn_alloc();
137
- static void gsl_ntuple_select_fn_free(gsl_ntuple_select_fn *ptr);
138
- int rb_gsl_ntuple_select_fn_f(void *data, void *p);
139
- static void gsl_ntuple_select_fn_mark(gsl_ntuple_select_fn *ptr);
140
-
141
- static gsl_ntuple_select_fn* gsl_ntuple_select_fn_alloc()
142
- {
143
- gsl_ntuple_select_fn *ptr = NULL;
144
- ptr = ALLOC(gsl_ntuple_select_fn);
145
- if (ptr == NULL) rb_raise(rb_eRuntimeError, "malloc failed");
146
- ptr->function = &rb_gsl_ntuple_select_fn_f;
147
- /* (VALUE) ptr->params = rb_ary_new2(3);*/
148
- ptr->params = (void *) rb_ary_new2(3);
149
- rb_ary_store((VALUE) ptr->params, 1, Qnil);
150
- return ptr;
151
- }
152
-
153
- static void gsl_ntuple_select_fn_free(gsl_ntuple_select_fn *ptr)
154
- {
155
- free((gsl_ntuple_select_fn *) ptr);
156
- }
157
-
158
- static void gsl_ntuple_select_fn_mark(gsl_ntuple_select_fn *ptr)
159
- {
160
- rb_gc_mark((VALUE) ptr->params);
161
- }
162
-
163
- static VALUE rb_gsl_ntuple_select_fn_set_f(int argc, VALUE *argv, VALUE obj)
164
- {
165
- gsl_ntuple_select_fn *F = NULL;
166
- VALUE ary, ary2;
167
- size_t i;
168
- Data_Get_Struct(obj, gsl_ntuple_select_fn, F);
169
- if (F->params == NULL) {
170
- ary = rb_ary_new2(3);
171
- /* (VALUE) F->params = ary;*/
172
- F->params = (void *) ary;
173
- } else {
174
- ary = (VALUE) F->params;
175
- }
176
- rb_ary_store(ary, 1, Qnil);
177
-
178
- switch (argc) {
179
- case 0:
180
- break;
181
- case 1:
182
- CHECK_PROC(argv[0]);
183
- rb_ary_store(ary, 0, argv[0]);
184
- break;
185
- case 2:
186
- CHECK_PROC(argv[0]);
187
- rb_ary_store(ary, 0, argv[0]);
188
- rb_ary_store(ary, 1, argv[1]);
189
- break;
190
- default:
191
- CHECK_PROC(argv[0]);
192
- rb_ary_store(ary, 0, argv[0]);
193
- ary2 = rb_ary_new2(argc-1);
194
- for (i = 1; (int) i < argc; i++) rb_ary_store(ary2, i-1, argv[i]);
195
- rb_ary_store(ary, 1, ary2);
196
- break;
197
- }
198
- if (rb_block_given_p()) rb_ary_store(ary, 0, rb_block_proc());
199
- return obj;
200
- }
201
-
202
- int rb_gsl_ntuple_select_fn_f(void *data, void *p)
203
- {
204
- VALUE result, ary, proc, params, vv;
205
- gsl_vector_view vtmp;
206
- size_t size;
207
- ary = (VALUE) p;
208
- proc = rb_ary_entry(ary, 0);
209
- params = rb_ary_entry(ary, 1);
210
- size = FIX2INT(rb_ary_entry(ary, 2));
211
- vtmp.vector.data = (double *) data;
212
- vtmp.vector.size = size;
213
- vtmp.vector.stride = 1;
214
- vv = Data_Wrap_Struct(cgsl_vector_view, 0, NULL, &vtmp);
215
- if (NIL_P(params)) result = rb_funcall(proc, RBGSL_ID_call, 1, vv);
216
- else result = rb_funcall(proc, RBGSL_ID_call, 2, vv, params);
217
- return FIX2INT(result);
218
- }
219
-
220
- static VALUE rb_gsl_ntuple_select_fn_params(VALUE obj)
221
- {
222
- gsl_ntuple_select_fn *F = NULL;
223
- Data_Get_Struct(obj, gsl_ntuple_select_fn, F);
224
- return rb_ary_entry((VALUE) F->params, 1);
225
- }
226
-
227
- static VALUE rb_gsl_ntuple_select_fn_set_params(int argc, VALUE *argv, VALUE obj)
228
- {
229
- gsl_ntuple_select_fn *F = NULL;
230
- VALUE ary, ary2;
231
- size_t i;
232
- if (argc == 0) return obj;
233
- Data_Get_Struct(obj, gsl_ntuple_select_fn, F);
234
- ary = (VALUE) F->params;
235
- if (argc == 1) {
236
- rb_ary_store(ary, 1, argv[0]);
237
- } else {
238
- ary2 = rb_ary_new2(argc);
239
- for (i = 0; (int) i < argc; i++) rb_ary_store(ary2, i, argv[i]);
240
- rb_ary_store(ary, 1, ary2);
241
- }
242
- return obj;
243
- }
244
-
245
- static VALUE rb_gsl_ntuple_select_fn_new(int argc, VALUE *argv, VALUE klass)
246
- {
247
- gsl_ntuple_select_fn *F = NULL;
248
- VALUE ff;
249
- F = gsl_ntuple_select_fn_alloc();
250
- ff = Data_Wrap_Struct(klass, gsl_ntuple_select_fn_mark, gsl_ntuple_select_fn_free, F);
251
- rb_gsl_ntuple_select_fn_set_f(argc, argv, ff);
252
- return ff;
253
- }
254
-
255
- /***** value_fn *****/
256
- static gsl_ntuple_value_fn* gsl_ntuple_value_fn_alloc();
257
- static void gsl_ntuple_value_fn_free(gsl_ntuple_value_fn *ptr);
258
- static double rb_gsl_ntuple_value_fn_f(void *data, void *p);
259
- static void gsl_ntuple_value_fn_mark(gsl_ntuple_value_fn *ptr);
260
-
261
- static gsl_ntuple_value_fn* gsl_ntuple_value_fn_alloc()
262
- {
263
- gsl_ntuple_value_fn *ptr = NULL;
264
- ptr = ALLOC(gsl_ntuple_value_fn);
265
- if (ptr == NULL) rb_raise(rb_eRuntimeError, "malloc failed");
266
- ptr->function = &rb_gsl_ntuple_value_fn_f;
267
- /* (VALUE) ptr->params = rb_ary_new2(3);*/
268
- ptr->params = (void *) rb_ary_new2(3);
269
- rb_ary_store((VALUE) ptr->params, 1, Qnil);
270
- return ptr;
271
- }
272
-
273
- static void gsl_ntuple_value_fn_mark(gsl_ntuple_value_fn *ptr)
274
- {
275
- rb_gc_mark((VALUE) ptr->params);
276
- }
277
-
278
- static void gsl_ntuple_value_fn_free(gsl_ntuple_value_fn *ptr)
279
- {
280
- free((gsl_ntuple_value_fn *) ptr);
281
- }
282
-
283
- static VALUE rb_gsl_ntuple_value_fn_set_f(int argc, VALUE *argv, VALUE obj)
284
- {
285
- gsl_ntuple_value_fn *F = NULL;
286
- VALUE ary, ary2;
287
- size_t i;
288
- Data_Get_Struct(obj, gsl_ntuple_value_fn, F);
289
- if (F->params == NULL) {
290
- ary = rb_ary_new2(3);
291
- /* (VALUE) F->params = ary;*/
292
- F->params = (void *) ary;
293
- } else {
294
- ary = (VALUE) F->params;
295
- }
296
- rb_ary_store(ary, 1, Qnil);
297
- switch (argc) {
298
- case 0:
299
- break;
300
- case 1:
301
- CHECK_PROC(argv[0]);
302
- rb_ary_store(ary, 0, argv[0]);
303
- break;
304
- case 2:
305
- CHECK_PROC(argv[0]);
306
- rb_ary_store(ary, 0, argv[0]);
307
- rb_ary_store(ary, 1, argv[1]);
308
- break;
309
- default:
310
- CHECK_PROC(argv[0]);
311
- rb_ary_store(ary, 0, argv[0]);
312
- ary2 = rb_ary_new2(argc-1);
313
- for (i = 1; (int) i < argc; i++) rb_ary_store(ary2, i-1, argv[i]);
314
- rb_ary_store(ary, 1, ary2);
315
- break;
316
- }
317
- if (rb_block_given_p()) rb_ary_store(ary, 0, rb_block_proc());
318
- return obj;
319
- }
320
-
321
- static double rb_gsl_ntuple_value_fn_f(void *data, void *p)
322
- {
323
- VALUE result, ary, proc, params, vv;
324
- gsl_vector_view vtmp;
325
- ary = (VALUE) p;
326
- proc = rb_ary_entry(ary, 0);
327
- params = rb_ary_entry(ary, 1);
328
- vtmp.vector.data = (double *) data;
329
- vtmp.vector.size = FIX2INT(rb_ary_entry(ary, 2));
330
- vtmp.vector.stride = 1;
331
- vv = Data_Wrap_Struct(cgsl_vector_view, 0, NULL, &vtmp);
332
- if (NIL_P(params)) result = rb_funcall(proc, RBGSL_ID_call, 1, vv);
333
- else result = rb_funcall(proc, RBGSL_ID_call, 2, vv, params);
334
- return NUM2DBL(result);
335
- }
336
-
337
- static VALUE rb_gsl_ntuple_value_fn_params(VALUE obj)
338
- {
339
- gsl_ntuple_value_fn *F = NULL;
340
- Data_Get_Struct(obj, gsl_ntuple_value_fn, F);
341
- return rb_ary_entry((VALUE) F->params, 1);
342
- }
343
-
344
- static VALUE rb_gsl_ntuple_value_fn_set_params(int argc, VALUE *argv, VALUE obj)
345
- {
346
- gsl_ntuple_value_fn *F = NULL;
347
- VALUE ary, ary2;
348
- size_t i;
349
- if (argc == 0) return obj;
350
- Data_Get_Struct(obj, gsl_ntuple_value_fn, F);
351
- ary = (VALUE) F->params;
352
- if (argc == 1) {
353
- rb_ary_store(ary, 1, argv[0]);
354
- } else {
355
- ary2 = rb_ary_new2(argc);
356
- for (i = 0; (int) i < argc; i++) rb_ary_store(ary2, i, argv[i]);
357
- rb_ary_store(ary, 1, ary2);
358
- }
359
- return obj;
360
- }
361
-
362
-
363
- static VALUE rb_gsl_ntuple_value_fn_new(int argc, VALUE *argv, VALUE klass)
364
- {
365
- gsl_ntuple_value_fn *F = NULL;
366
- VALUE ff;
367
- F = gsl_ntuple_value_fn_alloc();
368
- ff = Data_Wrap_Struct(klass, gsl_ntuple_value_fn_mark, gsl_ntuple_value_fn_free, F);
369
- rb_gsl_ntuple_value_fn_set_f(argc, argv, ff);
370
- return ff;
371
- }
372
-
373
- /* singleton method */
374
- static VALUE rb_gsl_ntuple_project(VALUE obj, VALUE hh, VALUE nn,
375
- VALUE vvfn, VALUE vsfn)
376
- {
377
- gsl_histogram *h = NULL;
378
- gsl_ntuple *n = NULL;
379
- gsl_ntuple_value_fn *vfn = NULL;
380
- gsl_ntuple_select_fn *sfn = NULL;
381
- int status;
382
- size_t size;
383
- if (!rb_obj_is_kind_of(hh, cgsl_histogram))
384
- rb_raise(rb_eTypeError, "argument 1: Histogram expected");
385
- Data_Get_Struct(hh, gsl_histogram, h);
386
- if (!rb_obj_is_kind_of(nn, cgsl_ntuple))
387
- rb_raise(rb_eTypeError, "argument 2: Ntuple expected");
388
- Data_Get_Struct(nn, gsl_ntuple, n);
389
- if (!rb_obj_is_kind_of(vvfn, cgsl_ntuple_value_fn))
390
- rb_raise(rb_eTypeError, "argument 3: Ntuple::ValueFn expected");
391
- Data_Get_Struct(vvfn, gsl_ntuple_value_fn, vfn);
392
- if (!rb_obj_is_kind_of(vsfn, cgsl_ntuple_select_fn))
393
- rb_raise(rb_eTypeError, "argument 4: Ntuple::SelectFn expected");
394
- Data_Get_Struct(vsfn, gsl_ntuple_select_fn, sfn);
395
-
396
- size = n->size/sizeof(double);
397
- rb_ary_store((VALUE) vfn->params, 2, INT2FIX(size));
398
- rb_ary_store((VALUE) sfn->params, 2, INT2FIX(size));
399
- status = gsl_ntuple_project(h, n, vfn, sfn);
400
- return INT2FIX(status);
401
- }
402
-
403
- /* method */
404
- static VALUE rb_gsl_ntuple_project2(VALUE obj, VALUE hh, VALUE vvfn, VALUE vsfn)
405
- {
406
- gsl_histogram *h = NULL;
407
- gsl_ntuple *n = NULL;
408
- gsl_ntuple_value_fn *vfn = NULL;
409
- gsl_ntuple_select_fn *sfn = NULL;
410
- int status;
411
- size_t size;
412
- CHECK_HISTOGRAM(hh);
413
- Data_Get_Struct(obj, gsl_ntuple, n);
414
- Data_Get_Struct(hh, gsl_histogram, h);
415
- if (!rb_obj_is_kind_of(vvfn, cgsl_ntuple_value_fn))
416
- rb_raise(rb_eTypeError, "argument 2: Ntuple::ValueFn expected");
417
- Data_Get_Struct(vvfn, gsl_ntuple_value_fn, vfn);
418
- if (!rb_obj_is_kind_of(vsfn, cgsl_ntuple_select_fn))
419
- rb_raise(rb_eTypeError, "argument 3: Ntuple::SelectFn expected");
420
- Data_Get_Struct(vsfn, gsl_ntuple_select_fn, sfn);
421
- size = n->size/sizeof(double);
422
- rb_ary_store((VALUE) vfn->params, 2, INT2FIX(size));
423
- rb_ary_store((VALUE) sfn->params, 2, INT2FIX(size));
424
- status = gsl_ntuple_project(h, n, vfn, sfn);
425
- return INT2FIX(status);
426
- }
427
-
428
- void Init_gsl_ntuple(VALUE module)
429
- {
430
- cgsl_ntuple = rb_define_class_under(module, "Ntuple", cGSL_Object);
431
- cgsl_ntuple_select_fn = rb_define_class_under(cgsl_ntuple, "SelectFn", cGSL_Object);
432
- cgsl_ntuple_value_fn = rb_define_class_under(cgsl_ntuple, "ValueFn", cGSL_Object);
433
-
434
- rb_define_singleton_method(cgsl_ntuple, "create", rb_gsl_ntuple_new, -1);
435
- rb_define_singleton_method(cgsl_ntuple, "alloc", rb_gsl_ntuple_new, -1);
436
- rb_define_singleton_method(cgsl_ntuple, "open", rb_gsl_ntuple_open, -1);
437
- rb_define_singleton_method(cgsl_ntuple, "close", rb_gsl_ntuple_close, 0);
438
-
439
- rb_define_method(cgsl_ntuple, "size", rb_gsl_ntuple_size, 0);
440
- rb_define_method(cgsl_ntuple, "write", rb_gsl_ntuple_write, 0);
441
- rb_define_method(cgsl_ntuple, "bookdata", rb_gsl_ntuple_bookdata, 0);
442
-
443
- rb_define_method(cgsl_ntuple, "read", rb_gsl_ntuple_read, 0);
444
-
445
- rb_define_method(cgsl_ntuple, "data", rb_gsl_ntuple_data, 0);
446
- rb_define_alias(cgsl_ntuple, "get_data", "data");
447
- rb_define_alias(cgsl_ntuple, "ntuple_data", "data");
448
-
449
- rb_define_singleton_method(cgsl_ntuple_select_fn, "alloc",
450
- rb_gsl_ntuple_select_fn_new, -1);
451
- rb_define_method(cgsl_ntuple_select_fn, "set",
452
- rb_gsl_ntuple_select_fn_set_f, -1);
453
- rb_define_method(cgsl_ntuple_select_fn, "set_params",
454
- rb_gsl_ntuple_select_fn_set_params, -1);
455
- rb_define_method(cgsl_ntuple_select_fn, "params",
456
- rb_gsl_ntuple_select_fn_params, 0);
457
-
458
- rb_define_singleton_method(cgsl_ntuple_value_fn, "alloc",
459
- rb_gsl_ntuple_value_fn_new, -1);
460
- rb_define_method(cgsl_ntuple_value_fn, "set",
461
- rb_gsl_ntuple_value_fn_set_f, -1);
462
- rb_define_method(cgsl_ntuple_value_fn, "set_params",
463
- rb_gsl_ntuple_value_fn_set_params, -1);
464
- rb_define_method(cgsl_ntuple_value_fn, "params",
465
- rb_gsl_ntuple_value_fn_params, 0);
466
-
467
- rb_define_singleton_method(cgsl_ntuple, "project", rb_gsl_ntuple_project, 4);
468
- rb_define_method(cgsl_ntuple, "project", rb_gsl_ntuple_project2, 3);
469
- }