rb-gsl 1.16.0.5 → 1.16.0.6
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- checksums.yaml +4 -4
- data/rb-gsl.gemspec +5 -10
- metadata +10 -713
- data/.gitignore +0 -12
- data/.travis.yml +0 -24
- data/AUTHORS +0 -12
- data/COPYING +0 -341
- data/ChangeLog +0 -621
- data/Gemfile +0 -4
- data/README.md +0 -77
- data/Rakefile +0 -20
- data/THANKS +0 -17
- data/examples/alf/alf.gp +0 -15
- data/examples/alf/alf.rb +0 -32
- data/examples/blas/blas.rb +0 -13
- data/examples/blas/dnrm2.rb +0 -16
- data/examples/blas/level1.rb +0 -81
- data/examples/blas/level2.rb +0 -11
- data/examples/blas/level3.rb +0 -12
- data/examples/bspline.rb +0 -57
- data/examples/cdf.rb +0 -16
- data/examples/cheb.rb +0 -21
- data/examples/combination.rb +0 -23
- data/examples/complex/RC-lpf.rb +0 -47
- data/examples/complex/add.rb +0 -36
- data/examples/complex/coerce.rb +0 -14
- data/examples/complex/complex.rb +0 -25
- data/examples/complex/fpmi.rb +0 -70
- data/examples/complex/functions.rb +0 -77
- data/examples/complex/michelson.rb +0 -36
- data/examples/complex/mul.rb +0 -28
- data/examples/complex/oscillator.rb +0 -17
- data/examples/complex/set.rb +0 -37
- data/examples/const/physconst.rb +0 -151
- data/examples/const/travel.rb +0 -45
- data/examples/deriv/demo.rb +0 -13
- data/examples/deriv/deriv.rb +0 -36
- data/examples/deriv/diff.rb +0 -35
- data/examples/dht.rb +0 -42
- data/examples/dirac.rb +0 -56
- data/examples/eigen/eigen.rb +0 -34
- data/examples/eigen/herm.rb +0 -22
- data/examples/eigen/narray.rb +0 -9
- data/examples/eigen/nonsymm.rb +0 -37
- data/examples/eigen/nonsymmv.rb +0 -43
- data/examples/eigen/qhoscillator.gp +0 -35
- data/examples/eigen/qhoscillator.rb +0 -90
- data/examples/eigen/vander.rb +0 -41
- data/examples/fft/fft.rb +0 -17
- data/examples/fft/fft2.rb +0 -17
- data/examples/fft/forward.rb +0 -25
- data/examples/fft/forward2.rb +0 -26
- data/examples/fft/radix2.rb +0 -18
- data/examples/fft/real-halfcomplex.rb +0 -33
- data/examples/fft/real-halfcomplex2.rb +0 -30
- data/examples/fft/realradix2.rb +0 -19
- data/examples/fft/sunspot.dat +0 -256
- data/examples/fft/sunspot.rb +0 -16
- data/examples/fit/expdata.dat +0 -20
- data/examples/fit/expfit.rb +0 -31
- data/examples/fit/gaussfit.rb +0 -29
- data/examples/fit/gaussian_2peaks.rb +0 -34
- data/examples/fit/hillfit.rb +0 -40
- data/examples/fit/lognormal.rb +0 -26
- data/examples/fit/lorentzfit.rb +0 -22
- data/examples/fit/multifit.rb +0 -72
- data/examples/fit/ndlinear.rb +0 -133
- data/examples/fit/nonlinearfit.rb +0 -89
- data/examples/fit/plot.gp +0 -36
- data/examples/fit/polyfit.rb +0 -9
- data/examples/fit/powerfit.rb +0 -21
- data/examples/fit/sigmoidfit.rb +0 -40
- data/examples/fit/sinfit.rb +0 -22
- data/examples/fit/wlinear.rb +0 -46
- data/examples/fresnel.rb +0 -11
- data/examples/function/function.rb +0 -36
- data/examples/function/log.rb +0 -7
- data/examples/function/min.rb +0 -33
- data/examples/function/sin.rb +0 -10
- data/examples/function/synchrotron.rb +0 -18
- data/examples/gallery/butterfly.rb +0 -7
- data/examples/gallery/cayley.rb +0 -12
- data/examples/gallery/cornu.rb +0 -23
- data/examples/gallery/eight.rb +0 -11
- data/examples/gallery/koch.rb +0 -40
- data/examples/gallery/lemniscate.rb +0 -11
- data/examples/gallery/polar.rb +0 -11
- data/examples/gallery/rgplot/cossin.rb +0 -35
- data/examples/gallery/rgplot/rgplot.replaced +0 -0
- data/examples/gallery/rgplot/roesller.rb +0 -55
- data/examples/gallery/roesller.rb +0 -39
- data/examples/gallery/scarabaeus.rb +0 -14
- data/examples/histogram/cauchy.rb +0 -27
- data/examples/histogram/cauchy.sh +0 -2
- data/examples/histogram/exponential.rb +0 -19
- data/examples/histogram/gauss.rb +0 -16
- data/examples/histogram/gsl-histogram.rb +0 -40
- data/examples/histogram/histo2d.rb +0 -31
- data/examples/histogram/histo3d.rb +0 -34
- data/examples/histogram/histogram-pdf.rb +0 -27
- data/examples/histogram/histogram.rb +0 -26
- data/examples/histogram/integral.rb +0 -28
- data/examples/histogram/poisson.rb +0 -27
- data/examples/histogram/power.rb +0 -25
- data/examples/histogram/rebin.rb +0 -17
- data/examples/histogram/smp.dat +0 -5
- data/examples/histogram/xexp.rb +0 -21
- data/examples/integration/ahmed.rb +0 -21
- data/examples/integration/cosmology.rb +0 -75
- data/examples/integration/friedmann.gp +0 -16
- data/examples/integration/friedmann.rb +0 -35
- data/examples/integration/gamma-zeta.rb +0 -35
- data/examples/integration/integration.rb +0 -22
- data/examples/integration/qag.rb +0 -8
- data/examples/integration/qag2.rb +0 -14
- data/examples/integration/qag3.rb +0 -8
- data/examples/integration/qagi.rb +0 -28
- data/examples/integration/qagi2.rb +0 -49
- data/examples/integration/qagiu.rb +0 -29
- data/examples/integration/qagp.rb +0 -20
- data/examples/integration/qags.rb +0 -14
- data/examples/integration/qawc.rb +0 -18
- data/examples/integration/qawf.rb +0 -41
- data/examples/integration/qawo.rb +0 -29
- data/examples/integration/qaws.rb +0 -30
- data/examples/integration/qng.rb +0 -17
- data/examples/interp/demo.gp +0 -20
- data/examples/interp/demo.rb +0 -45
- data/examples/interp/interp.rb +0 -37
- data/examples/interp/points +0 -10
- data/examples/interp/spline.rb +0 -20
- data/examples/jacobi/deriv.rb +0 -40
- data/examples/jacobi/integrate.rb +0 -34
- data/examples/jacobi/interp.rb +0 -43
- data/examples/jacobi/jacobi.rb +0 -11
- data/examples/linalg/HH.rb +0 -15
- data/examples/linalg/HH_narray.rb +0 -13
- data/examples/linalg/LQ_solve.rb +0 -73
- data/examples/linalg/LU.rb +0 -84
- data/examples/linalg/LU2.rb +0 -31
- data/examples/linalg/LU_narray.rb +0 -24
- data/examples/linalg/PTLQ.rb +0 -47
- data/examples/linalg/QR.rb +0 -18
- data/examples/linalg/QRPT.rb +0 -47
- data/examples/linalg/QR_solve.rb +0 -78
- data/examples/linalg/QR_solve_narray.rb +0 -13
- data/examples/linalg/SV.rb +0 -16
- data/examples/linalg/SV_narray.rb +0 -12
- data/examples/linalg/SV_solve.rb +0 -49
- data/examples/linalg/chol.rb +0 -29
- data/examples/linalg/chol_narray.rb +0 -15
- data/examples/linalg/complex.rb +0 -57
- data/examples/linalg/invert_narray.rb +0 -10
- data/examples/math/const.rb +0 -67
- data/examples/math/elementary.rb +0 -35
- data/examples/math/functions.rb +0 -41
- data/examples/math/inf_nan.rb +0 -34
- data/examples/math/minmax.rb +0 -22
- data/examples/math/power.rb +0 -18
- data/examples/math/test.rb +0 -31
- data/examples/matrix/a.dat +0 -0
- data/examples/matrix/add.rb +0 -45
- data/examples/matrix/b.dat +0 -4
- data/examples/matrix/cat.rb +0 -31
- data/examples/matrix/colvectors.rb +0 -24
- data/examples/matrix/complex.rb +0 -41
- data/examples/matrix/det.rb +0 -29
- data/examples/matrix/diagonal.rb +0 -23
- data/examples/matrix/get_all.rb +0 -159
- data/examples/matrix/hilbert.rb +0 -31
- data/examples/matrix/iterator.rb +0 -19
- data/examples/matrix/matrix.rb +0 -57
- data/examples/matrix/minmax.rb +0 -53
- data/examples/matrix/mul.rb +0 -39
- data/examples/matrix/rand.rb +0 -20
- data/examples/matrix/read.rb +0 -29
- data/examples/matrix/rowcol.rb +0 -47
- data/examples/matrix/set.rb +0 -41
- data/examples/matrix/set_all.rb +0 -100
- data/examples/matrix/view.rb +0 -32
- data/examples/matrix/view_all.rb +0 -148
- data/examples/matrix/write.rb +0 -23
- data/examples/min.rb +0 -29
- data/examples/monte/miser.rb +0 -47
- data/examples/monte/monte.rb +0 -47
- data/examples/monte/plain.rb +0 -47
- data/examples/monte/vegas.rb +0 -46
- data/examples/multimin/bundle.rb +0 -66
- data/examples/multimin/cqp.rb +0 -109
- data/examples/multimin/fdfminimizer.rb +0 -40
- data/examples/multimin/fminimizer.rb +0 -41
- data/examples/multiroot/demo.rb +0 -36
- data/examples/multiroot/fdfsolver.rb +0 -50
- data/examples/multiroot/fsolver.rb +0 -33
- data/examples/multiroot/fsolver2.rb +0 -32
- data/examples/multiroot/fsolver3.rb +0 -26
- data/examples/narray/histogram.rb +0 -14
- data/examples/narray/mandel.rb +0 -27
- data/examples/narray/narray.rb +0 -28
- data/examples/narray/narray2.rb +0 -44
- data/examples/narray/sf.rb +0 -26
- data/examples/ntuple/create.rb +0 -17
- data/examples/ntuple/project.rb +0 -31
- data/examples/odeiv/binarysystem.gp +0 -23
- data/examples/odeiv/binarysystem.rb +0 -104
- data/examples/odeiv/demo.gp +0 -24
- data/examples/odeiv/demo.rb +0 -69
- data/examples/odeiv/demo2.gp +0 -26
- data/examples/odeiv/duffing.rb +0 -45
- data/examples/odeiv/frei1.rb +0 -109
- data/examples/odeiv/frei2.rb +0 -76
- data/examples/odeiv/legendre.rb +0 -52
- data/examples/odeiv/odeiv.rb +0 -32
- data/examples/odeiv/odeiv2.rb +0 -45
- data/examples/odeiv/oscillator.rb +0 -42
- data/examples/odeiv/sedov.rb +0 -97
- data/examples/odeiv/whitedwarf.gp +0 -40
- data/examples/odeiv/whitedwarf.rb +0 -158
- data/examples/ool/conmin.rb +0 -100
- data/examples/ool/gencan.rb +0 -99
- data/examples/ool/pgrad.rb +0 -100
- data/examples/ool/spg.rb +0 -100
- data/examples/pdf/bernoulli.rb +0 -5
- data/examples/pdf/beta.rb +0 -7
- data/examples/pdf/binomiral.rb +0 -10
- data/examples/pdf/cauchy.rb +0 -6
- data/examples/pdf/chisq.rb +0 -8
- data/examples/pdf/exponential.rb +0 -7
- data/examples/pdf/exppow.rb +0 -6
- data/examples/pdf/fdist.rb +0 -7
- data/examples/pdf/flat.rb +0 -7
- data/examples/pdf/gamma.rb +0 -8
- data/examples/pdf/gauss-tail.rb +0 -5
- data/examples/pdf/gauss.rb +0 -6
- data/examples/pdf/geometric.rb +0 -5
- data/examples/pdf/gumbel.rb +0 -6
- data/examples/pdf/hypergeometric.rb +0 -11
- data/examples/pdf/landau.rb +0 -5
- data/examples/pdf/laplace.rb +0 -7
- data/examples/pdf/logarithmic.rb +0 -5
- data/examples/pdf/logistic.rb +0 -6
- data/examples/pdf/lognormal.rb +0 -6
- data/examples/pdf/neg-binomiral.rb +0 -10
- data/examples/pdf/pareto.rb +0 -7
- data/examples/pdf/pascal.rb +0 -10
- data/examples/pdf/poisson.rb +0 -5
- data/examples/pdf/rayleigh-tail.rb +0 -6
- data/examples/pdf/rayleigh.rb +0 -6
- data/examples/pdf/tdist.rb +0 -6
- data/examples/pdf/weibull.rb +0 -8
- data/examples/permutation/ex1.rb +0 -22
- data/examples/permutation/permutation.rb +0 -16
- data/examples/poly/bell.rb +0 -6
- data/examples/poly/bessel.rb +0 -6
- data/examples/poly/cheb.rb +0 -6
- data/examples/poly/cheb_II.rb +0 -6
- data/examples/poly/cubic.rb +0 -9
- data/examples/poly/demo.rb +0 -20
- data/examples/poly/eval.rb +0 -28
- data/examples/poly/eval_derivs.rb +0 -14
- data/examples/poly/fit.rb +0 -21
- data/examples/poly/hermite.rb +0 -6
- data/examples/poly/poly.rb +0 -13
- data/examples/poly/quadratic.rb +0 -25
- data/examples/random/diffusion.rb +0 -34
- data/examples/random/gaussian.rb +0 -9
- data/examples/random/generator.rb +0 -27
- data/examples/random/hdsobol.rb +0 -21
- data/examples/random/poisson.rb +0 -9
- data/examples/random/qrng.rb +0 -19
- data/examples/random/randomwalk.rb +0 -37
- data/examples/random/randomwalk2d.rb +0 -19
- data/examples/random/rayleigh.rb +0 -36
- data/examples/random/rng.rb +0 -33
- data/examples/random/rngextra.rb +0 -14
- data/examples/roots/bisection.rb +0 -25
- data/examples/roots/brent.rb +0 -43
- data/examples/roots/demo.rb +0 -30
- data/examples/roots/newton.rb +0 -46
- data/examples/roots/recombination.gp +0 -11
- data/examples/roots/recombination.rb +0 -61
- data/examples/roots/steffenson.rb +0 -48
- data/examples/sf/ShiChi.rb +0 -6
- data/examples/sf/SiCi.rb +0 -6
- data/examples/sf/airy_Ai.rb +0 -8
- data/examples/sf/airy_Bi.rb +0 -8
- data/examples/sf/bessel_IK.rb +0 -12
- data/examples/sf/bessel_JY.rb +0 -13
- data/examples/sf/beta_inc.rb +0 -9
- data/examples/sf/clausen.rb +0 -6
- data/examples/sf/dawson.rb +0 -5
- data/examples/sf/debye.rb +0 -9
- data/examples/sf/dilog.rb +0 -6
- data/examples/sf/ellint.rb +0 -6
- data/examples/sf/expint.rb +0 -8
- data/examples/sf/fermi.rb +0 -10
- data/examples/sf/gamma_inc_P.rb +0 -9
- data/examples/sf/gegenbauer.rb +0 -8
- data/examples/sf/hyperg.rb +0 -7
- data/examples/sf/laguerre.rb +0 -19
- data/examples/sf/lambertW.rb +0 -5
- data/examples/sf/legendre_P.rb +0 -10
- data/examples/sf/lngamma.rb +0 -5
- data/examples/sf/psi.rb +0 -54
- data/examples/sf/sphbessel.gp +0 -27
- data/examples/sf/sphbessel.rb +0 -30
- data/examples/sf/synchrotron.rb +0 -5
- data/examples/sf/transport.rb +0 -10
- data/examples/sf/zetam1.rb +0 -5
- data/examples/siman.rb +0 -44
- data/examples/sort/heapsort.rb +0 -23
- data/examples/sort/heapsort_vector_complex.rb +0 -21
- data/examples/sort/sort.rb +0 -23
- data/examples/sort/sort2.rb +0 -16
- data/examples/stats/mean.rb +0 -17
- data/examples/stats/statistics.rb +0 -18
- data/examples/stats/test.rb +0 -9
- data/examples/sum.rb +0 -34
- data/examples/tamu_anova.rb +0 -18
- data/examples/vector/a.dat +0 -0
- data/examples/vector/add.rb +0 -56
- data/examples/vector/b.dat +0 -4
- data/examples/vector/c.dat +0 -3
- data/examples/vector/collect.rb +0 -26
- data/examples/vector/compare.rb +0 -28
- data/examples/vector/complex.rb +0 -51
- data/examples/vector/complex_get_all.rb +0 -85
- data/examples/vector/complex_set_all.rb +0 -131
- data/examples/vector/complex_view_all.rb +0 -77
- data/examples/vector/connect.rb +0 -22
- data/examples/vector/decimate.rb +0 -38
- data/examples/vector/diff.rb +0 -31
- data/examples/vector/filescan.rb +0 -17
- data/examples/vector/floor.rb +0 -23
- data/examples/vector/get_all.rb +0 -82
- data/examples/vector/gnuplot.rb +0 -38
- data/examples/vector/graph.rb +0 -28
- data/examples/vector/histogram.rb +0 -22
- data/examples/vector/linspace.rb +0 -24
- data/examples/vector/log.rb +0 -17
- data/examples/vector/logic.rb +0 -33
- data/examples/vector/logspace.rb +0 -25
- data/examples/vector/minmax.rb +0 -47
- data/examples/vector/mul.rb +0 -49
- data/examples/vector/narray.rb +0 -46
- data/examples/vector/read.rb +0 -29
- data/examples/vector/set.rb +0 -35
- data/examples/vector/set_all.rb +0 -121
- data/examples/vector/smpv.dat +0 -15
- data/examples/vector/test.rb +0 -43
- data/examples/vector/test_gslblock.rb +0 -58
- data/examples/vector/vector.rb +0 -110
- data/examples/vector/view.rb +0 -35
- data/examples/vector/view_all.rb +0 -73
- data/examples/vector/where.rb +0 -29
- data/examples/vector/write.rb +0 -24
- data/examples/vector/zip.rb +0 -34
- data/examples/wavelet/ecg.dat +0 -256
- data/examples/wavelet/wavelet1.rb +0 -50
- data/ext/gsl_native/alf.c +0 -206
- data/ext/gsl_native/array.c +0 -553
- data/ext/gsl_native/array_complex.c +0 -245
- data/ext/gsl_native/blas.c +0 -28
- data/ext/gsl_native/blas1.c +0 -733
- data/ext/gsl_native/blas2.c +0 -1088
- data/ext/gsl_native/blas3.c +0 -880
- data/ext/gsl_native/block.c +0 -40
- data/ext/gsl_native/block_source.h +0 -885
- data/ext/gsl_native/bspline.c +0 -122
- data/ext/gsl_native/bundle.c +0 -3
- data/ext/gsl_native/cdf.c +0 -740
- data/ext/gsl_native/cheb.c +0 -531
- data/ext/gsl_native/combination.c +0 -275
- data/ext/gsl_native/common.c +0 -293
- data/ext/gsl_native/complex.c +0 -1002
- data/ext/gsl_native/const.c +0 -331
- data/ext/gsl_native/const_additional.c +0 -99
- data/ext/gsl_native/cqp.c +0 -283
- data/ext/gsl_native/deriv.c +0 -187
- data/ext/gsl_native/dht.c +0 -353
- data/ext/gsl_native/diff.c +0 -164
- data/ext/gsl_native/dirac.c +0 -388
- data/ext/gsl_native/eigen.c +0 -2322
- data/ext/gsl_native/error.c +0 -193
- data/ext/gsl_native/extconf.rb +0 -118
- data/ext/gsl_native/fft.c +0 -1095
- data/ext/gsl_native/fit.c +0 -204
- data/ext/gsl_native/fresnel.c +0 -312
- data/ext/gsl_native/function.c +0 -518
- data/ext/gsl_native/geometry.c +0 -139
- data/ext/gsl_native/graph.c +0 -1590
- data/ext/gsl_native/gsl.c +0 -259
- data/ext/gsl_native/gsl_narray.c +0 -794
- data/ext/gsl_native/histogram.c +0 -1964
- data/ext/gsl_native/histogram2d.c +0 -1042
- data/ext/gsl_native/histogram3d.c +0 -884
- data/ext/gsl_native/histogram3d_source.c +0 -749
- data/ext/gsl_native/histogram_find.c +0 -99
- data/ext/gsl_native/histogram_oper.c +0 -150
- data/ext/gsl_native/ieee.c +0 -88
- data/ext/gsl_native/include/rb_gsl.h +0 -136
- data/ext/gsl_native/include/rb_gsl_array.h +0 -214
- data/ext/gsl_native/include/rb_gsl_cheb.h +0 -19
- data/ext/gsl_native/include/rb_gsl_common.h +0 -348
- data/ext/gsl_native/include/rb_gsl_complex.h +0 -25
- data/ext/gsl_native/include/rb_gsl_const.h +0 -23
- data/ext/gsl_native/include/rb_gsl_dirac.h +0 -6
- data/ext/gsl_native/include/rb_gsl_eigen.h +0 -17
- data/ext/gsl_native/include/rb_gsl_fft.h +0 -49
- data/ext/gsl_native/include/rb_gsl_fit.h +0 -23
- data/ext/gsl_native/include/rb_gsl_function.h +0 -23
- data/ext/gsl_native/include/rb_gsl_graph.h +0 -68
- data/ext/gsl_native/include/rb_gsl_histogram.h +0 -63
- data/ext/gsl_native/include/rb_gsl_histogram3d.h +0 -97
- data/ext/gsl_native/include/rb_gsl_integration.h +0 -17
- data/ext/gsl_native/include/rb_gsl_interp.h +0 -41
- data/ext/gsl_native/include/rb_gsl_linalg.h +0 -21
- data/ext/gsl_native/include/rb_gsl_math.h +0 -20
- data/ext/gsl_native/include/rb_gsl_odeiv.h +0 -18
- data/ext/gsl_native/include/rb_gsl_poly.h +0 -67
- data/ext/gsl_native/include/rb_gsl_rational.h +0 -30
- data/ext/gsl_native/include/rb_gsl_rng.h +0 -20
- data/ext/gsl_native/include/rb_gsl_root.h +0 -22
- data/ext/gsl_native/include/rb_gsl_sf.h +0 -110
- data/ext/gsl_native/include/rb_gsl_statistics.h +0 -17
- data/ext/gsl_native/include/rb_gsl_tensor.h +0 -43
- data/ext/gsl_native/include/rb_gsl_with_narray.h +0 -31
- data/ext/gsl_native/include/templates_off.h +0 -87
- data/ext/gsl_native/include/templates_on.h +0 -241
- data/ext/gsl_native/integration.c +0 -1154
- data/ext/gsl_native/interp.c +0 -499
- data/ext/gsl_native/jacobi.c +0 -733
- data/ext/gsl_native/linalg.c +0 -3915
- data/ext/gsl_native/linalg_complex.c +0 -726
- data/ext/gsl_native/math.c +0 -706
- data/ext/gsl_native/matrix.c +0 -36
- data/ext/gsl_native/matrix_complex.c +0 -1733
- data/ext/gsl_native/matrix_double.c +0 -557
- data/ext/gsl_native/matrix_int.c +0 -255
- data/ext/gsl_native/matrix_source.h +0 -2708
- data/ext/gsl_native/min.c +0 -219
- data/ext/gsl_native/monte.c +0 -978
- data/ext/gsl_native/multifit.c +0 -1862
- data/ext/gsl_native/multimin.c +0 -778
- data/ext/gsl_native/multimin_fsdf.c +0 -156
- data/ext/gsl_native/multiroots.c +0 -952
- data/ext/gsl_native/multiset.c +0 -210
- data/ext/gsl_native/ndlinear.c +0 -320
- data/ext/gsl_native/nmf.c +0 -171
- data/ext/gsl_native/nmf_wrap.c +0 -75
- data/ext/gsl_native/ntuple.c +0 -469
- data/ext/gsl_native/odeiv.c +0 -947
- data/ext/gsl_native/ool.c +0 -879
- data/ext/gsl_native/permutation.c +0 -598
- data/ext/gsl_native/poly.c +0 -39
- data/ext/gsl_native/poly2.c +0 -265
- data/ext/gsl_native/poly_source.h +0 -1871
- data/ext/gsl_native/qrng.c +0 -160
- data/ext/gsl_native/randist.c +0 -1848
- data/ext/gsl_native/rational.c +0 -480
- data/ext/gsl_native/rng.c +0 -595
- data/ext/gsl_native/root.c +0 -407
- data/ext/gsl_native/sf.c +0 -1446
- data/ext/gsl_native/sf_airy.c +0 -200
- data/ext/gsl_native/sf_bessel.c +0 -871
- data/ext/gsl_native/sf_clausen.c +0 -28
- data/ext/gsl_native/sf_coulomb.c +0 -206
- data/ext/gsl_native/sf_coupling.c +0 -121
- data/ext/gsl_native/sf_dawson.c +0 -29
- data/ext/gsl_native/sf_debye.c +0 -148
- data/ext/gsl_native/sf_dilog.c +0 -43
- data/ext/gsl_native/sf_elementary.c +0 -46
- data/ext/gsl_native/sf_ellint.c +0 -206
- data/ext/gsl_native/sf_elljac.c +0 -30
- data/ext/gsl_native/sf_erfc.c +0 -89
- data/ext/gsl_native/sf_exp.c +0 -169
- data/ext/gsl_native/sf_expint.c +0 -201
- data/ext/gsl_native/sf_fermi_dirac.c +0 -148
- data/ext/gsl_native/sf_gamma.c +0 -343
- data/ext/gsl_native/sf_gegenbauer.c +0 -97
- data/ext/gsl_native/sf_hyperg.c +0 -203
- data/ext/gsl_native/sf_laguerre.c +0 -113
- data/ext/gsl_native/sf_lambert.c +0 -47
- data/ext/gsl_native/sf_legendre.c +0 -368
- data/ext/gsl_native/sf_log.c +0 -105
- data/ext/gsl_native/sf_mathieu.c +0 -235
- data/ext/gsl_native/sf_power.c +0 -47
- data/ext/gsl_native/sf_psi.c +0 -89
- data/ext/gsl_native/sf_synchrotron.c +0 -48
- data/ext/gsl_native/sf_transport.c +0 -76
- data/ext/gsl_native/sf_trigonometric.c +0 -210
- data/ext/gsl_native/sf_zeta.c +0 -115
- data/ext/gsl_native/signal.c +0 -303
- data/ext/gsl_native/siman.c +0 -713
- data/ext/gsl_native/sort.c +0 -207
- data/ext/gsl_native/spline.c +0 -377
- data/ext/gsl_native/stats.c +0 -787
- data/ext/gsl_native/sum.c +0 -168
- data/ext/gsl_native/tamu_anova.c +0 -56
- data/ext/gsl_native/tensor.c +0 -35
- data/ext/gsl_native/tensor_source.h +0 -1122
- data/ext/gsl_native/vector.c +0 -35
- data/ext/gsl_native/vector_complex.c +0 -2241
- data/ext/gsl_native/vector_double.c +0 -1433
- data/ext/gsl_native/vector_int.c +0 -202
- data/ext/gsl_native/vector_source.h +0 -3321
- data/ext/gsl_native/wavelet.c +0 -923
- data/lib/gsl.rb +0 -8
- data/lib/gsl/gnuplot.rb +0 -41
- data/lib/gsl/oper.rb +0 -43
- data/lib/gsl/version.rb +0 -3
- data/lib/ool.rb +0 -22
- data/lib/ool/conmin.rb +0 -30
- data/lib/rbgsl.rb +0 -1
- data/rdoc/alf.rdoc +0 -77
- data/rdoc/blas.rdoc +0 -269
- data/rdoc/bspline.rdoc +0 -42
- data/rdoc/changes.rdoc +0 -159
- data/rdoc/cheb.rdoc +0 -99
- data/rdoc/cholesky_complex.rdoc +0 -46
- data/rdoc/combi.rdoc +0 -125
- data/rdoc/complex.rdoc +0 -210
- data/rdoc/const.rdoc +0 -546
- data/rdoc/dht.rdoc +0 -122
- data/rdoc/diff.rdoc +0 -133
- data/rdoc/ehandling.rdoc +0 -50
- data/rdoc/eigen.rdoc +0 -401
- data/rdoc/fft.rdoc +0 -535
- data/rdoc/fit.rdoc +0 -284
- data/rdoc/function.rdoc +0 -94
- data/rdoc/graph.rdoc +0 -137
- data/rdoc/hist.rdoc +0 -409
- data/rdoc/hist2d.rdoc +0 -279
- data/rdoc/hist3d.rdoc +0 -112
- data/rdoc/integration.rdoc +0 -398
- data/rdoc/interp.rdoc +0 -231
- data/rdoc/intro.rdoc +0 -27
- data/rdoc/linalg.rdoc +0 -681
- data/rdoc/linalg_complex.rdoc +0 -88
- data/rdoc/math.rdoc +0 -276
- data/rdoc/matrix.rdoc +0 -1093
- data/rdoc/min.rdoc +0 -189
- data/rdoc/monte.rdoc +0 -234
- data/rdoc/multimin.rdoc +0 -312
- data/rdoc/multiroot.rdoc +0 -293
- data/rdoc/narray.rdoc +0 -177
- data/rdoc/ndlinear.rdoc +0 -250
- data/rdoc/nonlinearfit.rdoc +0 -348
- data/rdoc/ntuple.rdoc +0 -88
- data/rdoc/odeiv.rdoc +0 -378
- data/rdoc/perm.rdoc +0 -221
- data/rdoc/poly.rdoc +0 -335
- data/rdoc/qrng.rdoc +0 -90
- data/rdoc/randist.rdoc +0 -233
- data/rdoc/ref.rdoc +0 -93
- data/rdoc/rng.rdoc +0 -203
- data/rdoc/roots.rdoc +0 -305
- data/rdoc/sf.rdoc +0 -1622
- data/rdoc/siman.rdoc +0 -89
- data/rdoc/sort.rdoc +0 -94
- data/rdoc/start.rdoc +0 -16
- data/rdoc/stats.rdoc +0 -219
- data/rdoc/sum.rdoc +0 -65
- data/rdoc/tensor.rdoc +0 -251
- data/rdoc/tut.rdoc +0 -5
- data/rdoc/use.rdoc +0 -177
- data/rdoc/vector.rdoc +0 -1243
- data/rdoc/vector_complex.rdoc +0 -347
- data/rdoc/wavelet.rdoc +0 -218
- data/test/gsl/blas_test.rb +0 -79
- data/test/gsl/bspline_test.rb +0 -63
- data/test/gsl/cdf_test.rb +0 -1512
- data/test/gsl/cheb_test.rb +0 -80
- data/test/gsl/combination_test.rb +0 -100
- data/test/gsl/complex_test.rb +0 -20
- data/test/gsl/const_test.rb +0 -29
- data/test/gsl/deriv_test.rb +0 -62
- data/test/gsl/dht_test.rb +0 -79
- data/test/gsl/diff_test.rb +0 -53
- data/test/gsl/eigen_test.rb +0 -563
- data/test/gsl/err_test.rb +0 -23
- data/test/gsl/fit_test.rb +0 -101
- data/test/gsl/histo_test.rb +0 -14
- data/test/gsl/index_test.rb +0 -61
- data/test/gsl/integration_test.rb +0 -274
- data/test/gsl/interp_test.rb +0 -27
- data/test/gsl/linalg_test.rb +0 -463
- data/test/gsl/matrix_nmf_test.rb +0 -37
- data/test/gsl/matrix_test.rb +0 -98
- data/test/gsl/min_test.rb +0 -89
- data/test/gsl/monte_test.rb +0 -77
- data/test/gsl/multifit_test.rb +0 -753
- data/test/gsl/multimin_test.rb +0 -157
- data/test/gsl/multiroot_test.rb +0 -135
- data/test/gsl/multiset_test.rb +0 -52
- data/test/gsl/odeiv_test.rb +0 -275
- data/test/gsl/oper_test.rb +0 -98
- data/test/gsl/poly_test.rb +0 -338
- data/test/gsl/qrng_test.rb +0 -94
- data/test/gsl/quartic_test.rb +0 -28
- data/test/gsl/randist_test.rb +0 -122
- data/test/gsl/rng_test.rb +0 -303
- data/test/gsl/roots_test.rb +0 -78
- data/test/gsl/sf_test.rb +0 -2079
- data/test/gsl/stats_test.rb +0 -122
- data/test/gsl/sum_test.rb +0 -69
- data/test/gsl/tensor_test.rb +0 -396
- data/test/gsl/vector_test.rb +0 -223
- data/test/gsl/wavelet_test.rb +0 -130
- data/test/gsl_test.rb +0 -321
- data/test/test_helper.rb +0 -42
- data/uncrustify.cfg +0 -1693
data/ext/gsl_native/nmf.c
DELETED
@@ -1,171 +0,0 @@
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/**
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* NMF: Non-Negative Matrix Factorization
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*
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* Written by Roman Shterenzon
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* (Slightly modified by Y.Tsunesada: just added "const" qualifiers etc.)
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*/
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#include <math.h>
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#include <time.h>
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#include <gsl/gsl_matrix.h>
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#include <gsl/gsl_blas.h> /* for multiplication */
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#define THRESH 0.000001
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#define MAXITER 1000
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-
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#undef DEBUG
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#define mm(a, b) gsl_matrix_mult(a, b)
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//gsl_matrix * gsl_matrix_mult(gsl_matrix *a, gsl_matrix *b)
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gsl_matrix * gsl_matrix_mult(const gsl_matrix *a, const gsl_matrix *b)
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{
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gsl_matrix *c;
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c = gsl_matrix_alloc(a->size1, b->size2);
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gsl_blas_dgemm(CblasNoTrans, CblasNoTrans, 1.0, a, b, 0.0, c);
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return c;
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}
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-
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// pretty print
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//void pp(gsl_matrix *m)
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void pp(const gsl_matrix *m)
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{
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int r, c;
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-
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for(r = 0; r < (int) m->size1; r++) {
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for(c = 0; c < (int) m->size2; c++) {
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printf(" %.2f", gsl_matrix_get(m, r, c));
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}
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printf("\n");
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}
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}
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/* Returns a distance cost */
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//double difcost(gsl_matrix *a, gsl_matrix *b)
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double difcost(const gsl_matrix *a, const gsl_matrix *b)
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{
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int i, j;
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double dif = 0, d;
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for (i = 0; i < (int) a->size1; i++)
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{
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for (j = 0; j < (int) a->size2; j++)
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{
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d = gsl_matrix_get(a, i, j) - gsl_matrix_get(b, i, j);
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dif += d*d;
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// dif += pow(gsl_matrix_get(a, i, j) - gsl_matrix_get(b, i, j), 2);
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}
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}
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return dif;
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}
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static void initmatrix(gsl_matrix *m, double min, double max)
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{
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int i,j;
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double val;
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srand(time(NULL));
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for(i = 0; i < (int) m->size1; i++)
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{
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for(j = 0; j < (int) m->size2; j++)
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{
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val = min + (int) (max * (rand() / (RAND_MAX + min)));
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gsl_matrix_set(m, i, j, val);
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}
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}
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}
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static double update(gsl_matrix *v, gsl_matrix *w, gsl_matrix *h)
|
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{
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double dist = 0;
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gsl_matrix *wt = NULL, *ht = NULL, *wh = NULL;
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gsl_matrix *w_h = NULL, *wt_w = NULL;
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gsl_matrix *wt_v = NULL;
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gsl_matrix *v_ht = NULL, *wt_w_h = NULL, *w_h_ht = NULL;
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wt = gsl_matrix_alloc(w->size2, w->size1);
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gsl_matrix_transpose_memcpy(wt, w);
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ht = gsl_matrix_alloc(h->size2, h->size1);
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gsl_matrix_transpose_memcpy(ht, h);
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// wt * v
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wt_v = mm(wt, v);
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// wt * w * h
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wt_w = mm(wt, w);
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wt_w_h = mm(wt_w, h);
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gsl_matrix_free(wt_w);
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-
|
100
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// h = h.mul_elements(wt * v).div_elements(wt * w * h)
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gsl_matrix_mul_elements(h, wt_v);
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gsl_matrix_div_elements(h, wt_w_h);
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gsl_matrix_free(wt_v);
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gsl_matrix_free(wt_w_h);
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// v * ht
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v_ht = mm(v, ht);
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109
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// w * h * ht
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110
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w_h = mm(w, h);
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w_h_ht = mm(w_h, ht);
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gsl_matrix_free(w_h);
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-
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114
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// w = w.mul_elements(v * ht).div_elements(w * h * ht)
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gsl_matrix_mul_elements(w, v_ht);
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gsl_matrix_div_elements(w, w_h_ht);
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gsl_matrix_free(v_ht);
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gsl_matrix_free(w_h_ht);
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gsl_matrix_free(wt);
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gsl_matrix_free(ht);
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123
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wh = mm(w, h);
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dist = difcost(v, wh);
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gsl_matrix_free(wh);
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// w and h were modified in place
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return dist;
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}
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131
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/* The main thing - compute the nmf */
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int gsl_matrix_nmf(gsl_matrix *v, int cols, gsl_matrix **w, gsl_matrix **h)
|
133
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{
|
134
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double dist = 1;
|
135
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int iter = 1;
|
136
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double min, max;
|
137
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-
|
138
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#ifdef DEBUG
|
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printf("\nCols: %d\nv:\n", cols);
|
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pp(v);
|
141
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#endif
|
142
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|
143
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gsl_matrix_minmax(v, &min, &max);
|
144
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-
|
145
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#ifdef DEBUG
|
146
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printf("Min: %f, Max: %f\n", min, max);
|
147
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-
#endif
|
148
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-
*w = gsl_matrix_alloc(v->size1, cols);
|
149
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initmatrix(*w, min, max/2); // the multiplicative rules tend to increase w
|
150
|
-
|
151
|
-
*h = gsl_matrix_alloc(cols, v->size2);
|
152
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initmatrix(*h, min, max);
|
153
|
-
|
154
|
-
while(dist >= THRESH && iter < MAXITER)
|
155
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-
{
|
156
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-
dist = update(v, *w, *h);
|
157
|
-
#ifdef DEBUG
|
158
|
-
printf("Iteration: %d, distance: %f\n", iter, dist);
|
159
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-
printf("\nw:\n");
|
160
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-
pp(*w);
|
161
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printf("\nh:\n");
|
162
|
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pp(*h);
|
163
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printf("\n");
|
164
|
-
#endif
|
165
|
-
iter++;
|
166
|
-
}
|
167
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#ifdef DEBUG
|
168
|
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printf("Ended\n");
|
169
|
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#endif
|
170
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return GSL_SUCCESS;
|
171
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-
}
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data/ext/gsl_native/nmf_wrap.c
DELETED
@@ -1,75 +0,0 @@
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1
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/**
|
2
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-
* NMF: Non-Negative Matrix Factorization - Ruby wrapper
|
3
|
-
*
|
4
|
-
* Written by Roman Shterenzon
|
5
|
-
*
|
6
|
-
*/
|
7
|
-
|
8
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-
#include <ruby.h>
|
9
|
-
#include <gsl/gsl_matrix.h>
|
10
|
-
|
11
|
-
int gsl_matrix_nmf(gsl_matrix *v, int cols, gsl_matrix **w, gsl_matrix **h);
|
12
|
-
//double difcost(gsl_matrix *a, gsl_matrix *b);
|
13
|
-
double difcost(const gsl_matrix *a, const gsl_matrix *b);
|
14
|
-
|
15
|
-
//VALUE mNMF;
|
16
|
-
static VALUE mNMF;
|
17
|
-
extern VALUE cgsl_matrix;
|
18
|
-
|
19
|
-
/*
|
20
|
-
* call-seq:
|
21
|
-
* nmf(GSL::Matrix, columns) -> [GSL::Matrix, GSL::Matrix]
|
22
|
-
*
|
23
|
-
* Calculates the NMF of the given +matrix+, returns the W and H matrices
|
24
|
-
*/
|
25
|
-
static VALUE nmf_wrap(VALUE obj, VALUE matrix, VALUE cols)
|
26
|
-
{
|
27
|
-
gsl_matrix *w, *h, *m;
|
28
|
-
unsigned int c;
|
29
|
-
VALUE arr;
|
30
|
-
|
31
|
-
if ( !FIXNUM_P(cols) || (c = NUM2INT(cols)) <= 0 ) {
|
32
|
-
rb_raise(rb_eArgError, "Number of columns should be a positive integer.");
|
33
|
-
}
|
34
|
-
arr = rb_ary_new2(2);
|
35
|
-
Data_Get_Struct(matrix, gsl_matrix, m);
|
36
|
-
|
37
|
-
/* compute the NMF */
|
38
|
-
gsl_matrix_nmf(m, c, &w, &h);
|
39
|
-
|
40
|
-
rb_ary_push(arr, Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, w));
|
41
|
-
rb_ary_push(arr, Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, h));
|
42
|
-
|
43
|
-
return arr;
|
44
|
-
}
|
45
|
-
|
46
|
-
/*
|
47
|
-
* call-seq:
|
48
|
-
* difcost(GSL::Matrix, GSL::Matrix) -> Float
|
49
|
-
*
|
50
|
-
* Calculates the geometric distance between two matrices
|
51
|
-
*/
|
52
|
-
static VALUE difcost_wrap(VALUE obj, VALUE matrix1, VALUE matrix2)
|
53
|
-
{
|
54
|
-
gsl_matrix *m1, *m2;
|
55
|
-
Data_Get_Struct(matrix1, gsl_matrix, m1);
|
56
|
-
Data_Get_Struct(matrix2, gsl_matrix, m2);
|
57
|
-
return rb_float_new(difcost(m1, m2));
|
58
|
-
}
|
59
|
-
|
60
|
-
/* call-seq:
|
61
|
-
* nmf(cols) -> [GSL::Matrix, GSL::Matrix]
|
62
|
-
*/
|
63
|
-
static VALUE matrix_nmf(VALUE obj, VALUE cols)
|
64
|
-
{
|
65
|
-
// nmf_wrap(cgsl_matrix, obj, cols);
|
66
|
-
return nmf_wrap(cgsl_matrix, obj, cols);
|
67
|
-
}
|
68
|
-
|
69
|
-
void Init_gsl_matrix_nmf(void) {
|
70
|
-
mNMF = rb_define_module_under(cgsl_matrix, "NMF");
|
71
|
-
|
72
|
-
rb_define_singleton_method(mNMF, "nmf", nmf_wrap, 2);
|
73
|
-
rb_define_singleton_method(mNMF, "difcost", difcost_wrap, 2);
|
74
|
-
rb_define_method(cgsl_matrix, "nmf", matrix_nmf, 1);
|
75
|
-
}
|
data/ext/gsl_native/ntuple.c
DELETED
@@ -1,469 +0,0 @@
|
|
1
|
-
/*
|
2
|
-
ntuple.c
|
3
|
-
Ruby/GSL: Ruby extension library for GSL (GNU Scientific Library)
|
4
|
-
(C) Copyright 2001-2006 by Yoshiki Tsunesada
|
5
|
-
|
6
|
-
Ruby/GSL is free software: you can redistribute it and/or modify it
|
7
|
-
under the terms of the GNU General Public License.
|
8
|
-
This library is distributed in the hope that it will be useful, but
|
9
|
-
WITHOUT ANY WARRANTY.
|
10
|
-
*/
|
11
|
-
|
12
|
-
#include "include/rb_gsl.h"
|
13
|
-
#include "include/rb_gsl_array.h"
|
14
|
-
#include "include/rb_gsl_function.h"
|
15
|
-
#include "include/rb_gsl_histogram.h"
|
16
|
-
#include <gsl/gsl_ntuple.h>
|
17
|
-
|
18
|
-
static VALUE cgsl_ntuple;
|
19
|
-
static VALUE cgsl_ntuple_select_fn;
|
20
|
-
static VALUE cgsl_ntuple_value_fn;
|
21
|
-
|
22
|
-
static VALUE rb_gsl_ntuple_new(int argc, VALUE *argv, VALUE klass)
|
23
|
-
{
|
24
|
-
gsl_vector *v = NULL;
|
25
|
-
gsl_matrix *m = NULL;
|
26
|
-
gsl_ntuple *n = NULL;
|
27
|
-
double *data = NULL;
|
28
|
-
size_t size;
|
29
|
-
switch (argc) {
|
30
|
-
case 2:
|
31
|
-
case 3:
|
32
|
-
if (VECTOR_P(argv[1])) {
|
33
|
-
Data_Get_Struct(argv[1], gsl_vector, v);
|
34
|
-
data = v->data;
|
35
|
-
size = v->size;
|
36
|
-
} else if (MATRIX_P(argv[1])) {
|
37
|
-
Data_Get_Struct(argv[1], gsl_matrix, m);
|
38
|
-
data = m->data;
|
39
|
-
size = m->size1*m->size2;
|
40
|
-
} else {
|
41
|
-
rb_raise(rb_eTypeError, "Vector or Matrix expected");
|
42
|
-
}
|
43
|
-
if (argc == 3) size = FIX2INT(argv[2]);
|
44
|
-
break;
|
45
|
-
default:
|
46
|
-
rb_raise(rb_eArgError, "wrong number of arguments (%d for 2 or 3)", argc);
|
47
|
-
break;
|
48
|
-
}
|
49
|
-
n = gsl_ntuple_create(STR2CSTR(argv[0]), data, size*sizeof(double));
|
50
|
-
return Data_Wrap_Struct(klass, 0, gsl_ntuple_close, n);
|
51
|
-
}
|
52
|
-
|
53
|
-
VALUE rb_gsl_ntuple_open(int argc, VALUE *argv, VALUE klass)
|
54
|
-
{
|
55
|
-
gsl_vector *v = NULL;
|
56
|
-
gsl_matrix *m = NULL;
|
57
|
-
gsl_ntuple *n = NULL;
|
58
|
-
double *data = NULL;
|
59
|
-
size_t size;
|
60
|
-
switch (argc) {
|
61
|
-
case 2:
|
62
|
-
case 3:
|
63
|
-
if (VECTOR_P(argv[1])) {
|
64
|
-
Data_Get_Struct(argv[1], gsl_vector, v);
|
65
|
-
data = v->data;
|
66
|
-
size = v->size;
|
67
|
-
} else if (MATRIX_P(argv[1])) {
|
68
|
-
Data_Get_Struct(argv[1], gsl_matrix, m);
|
69
|
-
data = m->data;
|
70
|
-
size = m->size1*m->size2;
|
71
|
-
} else {
|
72
|
-
rb_raise(rb_eTypeError, "Vector or Matrix expected");
|
73
|
-
}
|
74
|
-
if (argc == 3) size = FIX2INT(argv[2]);
|
75
|
-
break;
|
76
|
-
default:
|
77
|
-
rb_raise(rb_eArgError, "wrong number of arguments (%d for 2 or 3)", argc);
|
78
|
-
break;
|
79
|
-
}
|
80
|
-
n = gsl_ntuple_open(STR2CSTR(argv[0]), data, size*sizeof(double));
|
81
|
-
return Data_Wrap_Struct(klass, 0, gsl_ntuple_close, n);
|
82
|
-
}
|
83
|
-
|
84
|
-
VALUE rb_gsl_ntuple_write(VALUE obj)
|
85
|
-
{
|
86
|
-
gsl_ntuple *n = NULL;
|
87
|
-
Data_Get_Struct(obj, gsl_ntuple, n);
|
88
|
-
gsl_ntuple_write(n);
|
89
|
-
return obj;
|
90
|
-
}
|
91
|
-
|
92
|
-
VALUE rb_gsl_ntuple_bookdata(VALUE obj)
|
93
|
-
{
|
94
|
-
gsl_ntuple *n = NULL;
|
95
|
-
Data_Get_Struct(obj, gsl_ntuple, n);
|
96
|
-
gsl_ntuple_bookdata(n);
|
97
|
-
return obj;
|
98
|
-
}
|
99
|
-
|
100
|
-
VALUE rb_gsl_ntuple_read(VALUE obj)
|
101
|
-
{
|
102
|
-
gsl_ntuple *n = NULL;
|
103
|
-
Data_Get_Struct(obj, gsl_ntuple, n);
|
104
|
-
gsl_ntuple_read(n);
|
105
|
-
return obj;
|
106
|
-
}
|
107
|
-
|
108
|
-
VALUE rb_gsl_ntuple_close(VALUE klass, VALUE obj)
|
109
|
-
{
|
110
|
-
gsl_ntuple *n = NULL;
|
111
|
-
Data_Get_Struct(obj, gsl_ntuple, n);
|
112
|
-
gsl_ntuple_close(n);
|
113
|
-
return Qnil;
|
114
|
-
}
|
115
|
-
|
116
|
-
VALUE rb_gsl_ntuple_size(VALUE klass, VALUE obj)
|
117
|
-
{
|
118
|
-
gsl_ntuple *n = NULL;
|
119
|
-
Data_Get_Struct(obj, gsl_ntuple, n);
|
120
|
-
return INT2FIX(n->size);
|
121
|
-
}
|
122
|
-
|
123
|
-
VALUE rb_gsl_ntuple_data(VALUE obj)
|
124
|
-
{
|
125
|
-
gsl_ntuple *n = NULL;
|
126
|
-
gsl_vector_view *v = NULL;
|
127
|
-
Data_Get_Struct(obj, gsl_ntuple, n);
|
128
|
-
v = gsl_vector_view_alloc();
|
129
|
-
v->vector.size = n->size;
|
130
|
-
v->vector.data = n->ntuple_data;
|
131
|
-
return Data_Wrap_Struct(cgsl_vector_view, 0, gsl_vector_view_free, v);
|
132
|
-
}
|
133
|
-
|
134
|
-
/***** select_fn *****/
|
135
|
-
|
136
|
-
static gsl_ntuple_select_fn* gsl_ntuple_select_fn_alloc();
|
137
|
-
static void gsl_ntuple_select_fn_free(gsl_ntuple_select_fn *ptr);
|
138
|
-
int rb_gsl_ntuple_select_fn_f(void *data, void *p);
|
139
|
-
static void gsl_ntuple_select_fn_mark(gsl_ntuple_select_fn *ptr);
|
140
|
-
|
141
|
-
static gsl_ntuple_select_fn* gsl_ntuple_select_fn_alloc()
|
142
|
-
{
|
143
|
-
gsl_ntuple_select_fn *ptr = NULL;
|
144
|
-
ptr = ALLOC(gsl_ntuple_select_fn);
|
145
|
-
if (ptr == NULL) rb_raise(rb_eRuntimeError, "malloc failed");
|
146
|
-
ptr->function = &rb_gsl_ntuple_select_fn_f;
|
147
|
-
/* (VALUE) ptr->params = rb_ary_new2(3);*/
|
148
|
-
ptr->params = (void *) rb_ary_new2(3);
|
149
|
-
rb_ary_store((VALUE) ptr->params, 1, Qnil);
|
150
|
-
return ptr;
|
151
|
-
}
|
152
|
-
|
153
|
-
static void gsl_ntuple_select_fn_free(gsl_ntuple_select_fn *ptr)
|
154
|
-
{
|
155
|
-
free((gsl_ntuple_select_fn *) ptr);
|
156
|
-
}
|
157
|
-
|
158
|
-
static void gsl_ntuple_select_fn_mark(gsl_ntuple_select_fn *ptr)
|
159
|
-
{
|
160
|
-
rb_gc_mark((VALUE) ptr->params);
|
161
|
-
}
|
162
|
-
|
163
|
-
static VALUE rb_gsl_ntuple_select_fn_set_f(int argc, VALUE *argv, VALUE obj)
|
164
|
-
{
|
165
|
-
gsl_ntuple_select_fn *F = NULL;
|
166
|
-
VALUE ary, ary2;
|
167
|
-
size_t i;
|
168
|
-
Data_Get_Struct(obj, gsl_ntuple_select_fn, F);
|
169
|
-
if (F->params == NULL) {
|
170
|
-
ary = rb_ary_new2(3);
|
171
|
-
/* (VALUE) F->params = ary;*/
|
172
|
-
F->params = (void *) ary;
|
173
|
-
} else {
|
174
|
-
ary = (VALUE) F->params;
|
175
|
-
}
|
176
|
-
rb_ary_store(ary, 1, Qnil);
|
177
|
-
|
178
|
-
switch (argc) {
|
179
|
-
case 0:
|
180
|
-
break;
|
181
|
-
case 1:
|
182
|
-
CHECK_PROC(argv[0]);
|
183
|
-
rb_ary_store(ary, 0, argv[0]);
|
184
|
-
break;
|
185
|
-
case 2:
|
186
|
-
CHECK_PROC(argv[0]);
|
187
|
-
rb_ary_store(ary, 0, argv[0]);
|
188
|
-
rb_ary_store(ary, 1, argv[1]);
|
189
|
-
break;
|
190
|
-
default:
|
191
|
-
CHECK_PROC(argv[0]);
|
192
|
-
rb_ary_store(ary, 0, argv[0]);
|
193
|
-
ary2 = rb_ary_new2(argc-1);
|
194
|
-
for (i = 1; (int) i < argc; i++) rb_ary_store(ary2, i-1, argv[i]);
|
195
|
-
rb_ary_store(ary, 1, ary2);
|
196
|
-
break;
|
197
|
-
}
|
198
|
-
if (rb_block_given_p()) rb_ary_store(ary, 0, rb_block_proc());
|
199
|
-
return obj;
|
200
|
-
}
|
201
|
-
|
202
|
-
int rb_gsl_ntuple_select_fn_f(void *data, void *p)
|
203
|
-
{
|
204
|
-
VALUE result, ary, proc, params, vv;
|
205
|
-
gsl_vector_view vtmp;
|
206
|
-
size_t size;
|
207
|
-
ary = (VALUE) p;
|
208
|
-
proc = rb_ary_entry(ary, 0);
|
209
|
-
params = rb_ary_entry(ary, 1);
|
210
|
-
size = FIX2INT(rb_ary_entry(ary, 2));
|
211
|
-
vtmp.vector.data = (double *) data;
|
212
|
-
vtmp.vector.size = size;
|
213
|
-
vtmp.vector.stride = 1;
|
214
|
-
vv = Data_Wrap_Struct(cgsl_vector_view, 0, NULL, &vtmp);
|
215
|
-
if (NIL_P(params)) result = rb_funcall(proc, RBGSL_ID_call, 1, vv);
|
216
|
-
else result = rb_funcall(proc, RBGSL_ID_call, 2, vv, params);
|
217
|
-
return FIX2INT(result);
|
218
|
-
}
|
219
|
-
|
220
|
-
static VALUE rb_gsl_ntuple_select_fn_params(VALUE obj)
|
221
|
-
{
|
222
|
-
gsl_ntuple_select_fn *F = NULL;
|
223
|
-
Data_Get_Struct(obj, gsl_ntuple_select_fn, F);
|
224
|
-
return rb_ary_entry((VALUE) F->params, 1);
|
225
|
-
}
|
226
|
-
|
227
|
-
static VALUE rb_gsl_ntuple_select_fn_set_params(int argc, VALUE *argv, VALUE obj)
|
228
|
-
{
|
229
|
-
gsl_ntuple_select_fn *F = NULL;
|
230
|
-
VALUE ary, ary2;
|
231
|
-
size_t i;
|
232
|
-
if (argc == 0) return obj;
|
233
|
-
Data_Get_Struct(obj, gsl_ntuple_select_fn, F);
|
234
|
-
ary = (VALUE) F->params;
|
235
|
-
if (argc == 1) {
|
236
|
-
rb_ary_store(ary, 1, argv[0]);
|
237
|
-
} else {
|
238
|
-
ary2 = rb_ary_new2(argc);
|
239
|
-
for (i = 0; (int) i < argc; i++) rb_ary_store(ary2, i, argv[i]);
|
240
|
-
rb_ary_store(ary, 1, ary2);
|
241
|
-
}
|
242
|
-
return obj;
|
243
|
-
}
|
244
|
-
|
245
|
-
static VALUE rb_gsl_ntuple_select_fn_new(int argc, VALUE *argv, VALUE klass)
|
246
|
-
{
|
247
|
-
gsl_ntuple_select_fn *F = NULL;
|
248
|
-
VALUE ff;
|
249
|
-
F = gsl_ntuple_select_fn_alloc();
|
250
|
-
ff = Data_Wrap_Struct(klass, gsl_ntuple_select_fn_mark, gsl_ntuple_select_fn_free, F);
|
251
|
-
rb_gsl_ntuple_select_fn_set_f(argc, argv, ff);
|
252
|
-
return ff;
|
253
|
-
}
|
254
|
-
|
255
|
-
/***** value_fn *****/
|
256
|
-
static gsl_ntuple_value_fn* gsl_ntuple_value_fn_alloc();
|
257
|
-
static void gsl_ntuple_value_fn_free(gsl_ntuple_value_fn *ptr);
|
258
|
-
static double rb_gsl_ntuple_value_fn_f(void *data, void *p);
|
259
|
-
static void gsl_ntuple_value_fn_mark(gsl_ntuple_value_fn *ptr);
|
260
|
-
|
261
|
-
static gsl_ntuple_value_fn* gsl_ntuple_value_fn_alloc()
|
262
|
-
{
|
263
|
-
gsl_ntuple_value_fn *ptr = NULL;
|
264
|
-
ptr = ALLOC(gsl_ntuple_value_fn);
|
265
|
-
if (ptr == NULL) rb_raise(rb_eRuntimeError, "malloc failed");
|
266
|
-
ptr->function = &rb_gsl_ntuple_value_fn_f;
|
267
|
-
/* (VALUE) ptr->params = rb_ary_new2(3);*/
|
268
|
-
ptr->params = (void *) rb_ary_new2(3);
|
269
|
-
rb_ary_store((VALUE) ptr->params, 1, Qnil);
|
270
|
-
return ptr;
|
271
|
-
}
|
272
|
-
|
273
|
-
static void gsl_ntuple_value_fn_mark(gsl_ntuple_value_fn *ptr)
|
274
|
-
{
|
275
|
-
rb_gc_mark((VALUE) ptr->params);
|
276
|
-
}
|
277
|
-
|
278
|
-
static void gsl_ntuple_value_fn_free(gsl_ntuple_value_fn *ptr)
|
279
|
-
{
|
280
|
-
free((gsl_ntuple_value_fn *) ptr);
|
281
|
-
}
|
282
|
-
|
283
|
-
static VALUE rb_gsl_ntuple_value_fn_set_f(int argc, VALUE *argv, VALUE obj)
|
284
|
-
{
|
285
|
-
gsl_ntuple_value_fn *F = NULL;
|
286
|
-
VALUE ary, ary2;
|
287
|
-
size_t i;
|
288
|
-
Data_Get_Struct(obj, gsl_ntuple_value_fn, F);
|
289
|
-
if (F->params == NULL) {
|
290
|
-
ary = rb_ary_new2(3);
|
291
|
-
/* (VALUE) F->params = ary;*/
|
292
|
-
F->params = (void *) ary;
|
293
|
-
} else {
|
294
|
-
ary = (VALUE) F->params;
|
295
|
-
}
|
296
|
-
rb_ary_store(ary, 1, Qnil);
|
297
|
-
switch (argc) {
|
298
|
-
case 0:
|
299
|
-
break;
|
300
|
-
case 1:
|
301
|
-
CHECK_PROC(argv[0]);
|
302
|
-
rb_ary_store(ary, 0, argv[0]);
|
303
|
-
break;
|
304
|
-
case 2:
|
305
|
-
CHECK_PROC(argv[0]);
|
306
|
-
rb_ary_store(ary, 0, argv[0]);
|
307
|
-
rb_ary_store(ary, 1, argv[1]);
|
308
|
-
break;
|
309
|
-
default:
|
310
|
-
CHECK_PROC(argv[0]);
|
311
|
-
rb_ary_store(ary, 0, argv[0]);
|
312
|
-
ary2 = rb_ary_new2(argc-1);
|
313
|
-
for (i = 1; (int) i < argc; i++) rb_ary_store(ary2, i-1, argv[i]);
|
314
|
-
rb_ary_store(ary, 1, ary2);
|
315
|
-
break;
|
316
|
-
}
|
317
|
-
if (rb_block_given_p()) rb_ary_store(ary, 0, rb_block_proc());
|
318
|
-
return obj;
|
319
|
-
}
|
320
|
-
|
321
|
-
static double rb_gsl_ntuple_value_fn_f(void *data, void *p)
|
322
|
-
{
|
323
|
-
VALUE result, ary, proc, params, vv;
|
324
|
-
gsl_vector_view vtmp;
|
325
|
-
ary = (VALUE) p;
|
326
|
-
proc = rb_ary_entry(ary, 0);
|
327
|
-
params = rb_ary_entry(ary, 1);
|
328
|
-
vtmp.vector.data = (double *) data;
|
329
|
-
vtmp.vector.size = FIX2INT(rb_ary_entry(ary, 2));
|
330
|
-
vtmp.vector.stride = 1;
|
331
|
-
vv = Data_Wrap_Struct(cgsl_vector_view, 0, NULL, &vtmp);
|
332
|
-
if (NIL_P(params)) result = rb_funcall(proc, RBGSL_ID_call, 1, vv);
|
333
|
-
else result = rb_funcall(proc, RBGSL_ID_call, 2, vv, params);
|
334
|
-
return NUM2DBL(result);
|
335
|
-
}
|
336
|
-
|
337
|
-
static VALUE rb_gsl_ntuple_value_fn_params(VALUE obj)
|
338
|
-
{
|
339
|
-
gsl_ntuple_value_fn *F = NULL;
|
340
|
-
Data_Get_Struct(obj, gsl_ntuple_value_fn, F);
|
341
|
-
return rb_ary_entry((VALUE) F->params, 1);
|
342
|
-
}
|
343
|
-
|
344
|
-
static VALUE rb_gsl_ntuple_value_fn_set_params(int argc, VALUE *argv, VALUE obj)
|
345
|
-
{
|
346
|
-
gsl_ntuple_value_fn *F = NULL;
|
347
|
-
VALUE ary, ary2;
|
348
|
-
size_t i;
|
349
|
-
if (argc == 0) return obj;
|
350
|
-
Data_Get_Struct(obj, gsl_ntuple_value_fn, F);
|
351
|
-
ary = (VALUE) F->params;
|
352
|
-
if (argc == 1) {
|
353
|
-
rb_ary_store(ary, 1, argv[0]);
|
354
|
-
} else {
|
355
|
-
ary2 = rb_ary_new2(argc);
|
356
|
-
for (i = 0; (int) i < argc; i++) rb_ary_store(ary2, i, argv[i]);
|
357
|
-
rb_ary_store(ary, 1, ary2);
|
358
|
-
}
|
359
|
-
return obj;
|
360
|
-
}
|
361
|
-
|
362
|
-
|
363
|
-
static VALUE rb_gsl_ntuple_value_fn_new(int argc, VALUE *argv, VALUE klass)
|
364
|
-
{
|
365
|
-
gsl_ntuple_value_fn *F = NULL;
|
366
|
-
VALUE ff;
|
367
|
-
F = gsl_ntuple_value_fn_alloc();
|
368
|
-
ff = Data_Wrap_Struct(klass, gsl_ntuple_value_fn_mark, gsl_ntuple_value_fn_free, F);
|
369
|
-
rb_gsl_ntuple_value_fn_set_f(argc, argv, ff);
|
370
|
-
return ff;
|
371
|
-
}
|
372
|
-
|
373
|
-
/* singleton method */
|
374
|
-
static VALUE rb_gsl_ntuple_project(VALUE obj, VALUE hh, VALUE nn,
|
375
|
-
VALUE vvfn, VALUE vsfn)
|
376
|
-
{
|
377
|
-
gsl_histogram *h = NULL;
|
378
|
-
gsl_ntuple *n = NULL;
|
379
|
-
gsl_ntuple_value_fn *vfn = NULL;
|
380
|
-
gsl_ntuple_select_fn *sfn = NULL;
|
381
|
-
int status;
|
382
|
-
size_t size;
|
383
|
-
if (!rb_obj_is_kind_of(hh, cgsl_histogram))
|
384
|
-
rb_raise(rb_eTypeError, "argument 1: Histogram expected");
|
385
|
-
Data_Get_Struct(hh, gsl_histogram, h);
|
386
|
-
if (!rb_obj_is_kind_of(nn, cgsl_ntuple))
|
387
|
-
rb_raise(rb_eTypeError, "argument 2: Ntuple expected");
|
388
|
-
Data_Get_Struct(nn, gsl_ntuple, n);
|
389
|
-
if (!rb_obj_is_kind_of(vvfn, cgsl_ntuple_value_fn))
|
390
|
-
rb_raise(rb_eTypeError, "argument 3: Ntuple::ValueFn expected");
|
391
|
-
Data_Get_Struct(vvfn, gsl_ntuple_value_fn, vfn);
|
392
|
-
if (!rb_obj_is_kind_of(vsfn, cgsl_ntuple_select_fn))
|
393
|
-
rb_raise(rb_eTypeError, "argument 4: Ntuple::SelectFn expected");
|
394
|
-
Data_Get_Struct(vsfn, gsl_ntuple_select_fn, sfn);
|
395
|
-
|
396
|
-
size = n->size/sizeof(double);
|
397
|
-
rb_ary_store((VALUE) vfn->params, 2, INT2FIX(size));
|
398
|
-
rb_ary_store((VALUE) sfn->params, 2, INT2FIX(size));
|
399
|
-
status = gsl_ntuple_project(h, n, vfn, sfn);
|
400
|
-
return INT2FIX(status);
|
401
|
-
}
|
402
|
-
|
403
|
-
/* method */
|
404
|
-
static VALUE rb_gsl_ntuple_project2(VALUE obj, VALUE hh, VALUE vvfn, VALUE vsfn)
|
405
|
-
{
|
406
|
-
gsl_histogram *h = NULL;
|
407
|
-
gsl_ntuple *n = NULL;
|
408
|
-
gsl_ntuple_value_fn *vfn = NULL;
|
409
|
-
gsl_ntuple_select_fn *sfn = NULL;
|
410
|
-
int status;
|
411
|
-
size_t size;
|
412
|
-
CHECK_HISTOGRAM(hh);
|
413
|
-
Data_Get_Struct(obj, gsl_ntuple, n);
|
414
|
-
Data_Get_Struct(hh, gsl_histogram, h);
|
415
|
-
if (!rb_obj_is_kind_of(vvfn, cgsl_ntuple_value_fn))
|
416
|
-
rb_raise(rb_eTypeError, "argument 2: Ntuple::ValueFn expected");
|
417
|
-
Data_Get_Struct(vvfn, gsl_ntuple_value_fn, vfn);
|
418
|
-
if (!rb_obj_is_kind_of(vsfn, cgsl_ntuple_select_fn))
|
419
|
-
rb_raise(rb_eTypeError, "argument 3: Ntuple::SelectFn expected");
|
420
|
-
Data_Get_Struct(vsfn, gsl_ntuple_select_fn, sfn);
|
421
|
-
size = n->size/sizeof(double);
|
422
|
-
rb_ary_store((VALUE) vfn->params, 2, INT2FIX(size));
|
423
|
-
rb_ary_store((VALUE) sfn->params, 2, INT2FIX(size));
|
424
|
-
status = gsl_ntuple_project(h, n, vfn, sfn);
|
425
|
-
return INT2FIX(status);
|
426
|
-
}
|
427
|
-
|
428
|
-
void Init_gsl_ntuple(VALUE module)
|
429
|
-
{
|
430
|
-
cgsl_ntuple = rb_define_class_under(module, "Ntuple", cGSL_Object);
|
431
|
-
cgsl_ntuple_select_fn = rb_define_class_under(cgsl_ntuple, "SelectFn", cGSL_Object);
|
432
|
-
cgsl_ntuple_value_fn = rb_define_class_under(cgsl_ntuple, "ValueFn", cGSL_Object);
|
433
|
-
|
434
|
-
rb_define_singleton_method(cgsl_ntuple, "create", rb_gsl_ntuple_new, -1);
|
435
|
-
rb_define_singleton_method(cgsl_ntuple, "alloc", rb_gsl_ntuple_new, -1);
|
436
|
-
rb_define_singleton_method(cgsl_ntuple, "open", rb_gsl_ntuple_open, -1);
|
437
|
-
rb_define_singleton_method(cgsl_ntuple, "close", rb_gsl_ntuple_close, 0);
|
438
|
-
|
439
|
-
rb_define_method(cgsl_ntuple, "size", rb_gsl_ntuple_size, 0);
|
440
|
-
rb_define_method(cgsl_ntuple, "write", rb_gsl_ntuple_write, 0);
|
441
|
-
rb_define_method(cgsl_ntuple, "bookdata", rb_gsl_ntuple_bookdata, 0);
|
442
|
-
|
443
|
-
rb_define_method(cgsl_ntuple, "read", rb_gsl_ntuple_read, 0);
|
444
|
-
|
445
|
-
rb_define_method(cgsl_ntuple, "data", rb_gsl_ntuple_data, 0);
|
446
|
-
rb_define_alias(cgsl_ntuple, "get_data", "data");
|
447
|
-
rb_define_alias(cgsl_ntuple, "ntuple_data", "data");
|
448
|
-
|
449
|
-
rb_define_singleton_method(cgsl_ntuple_select_fn, "alloc",
|
450
|
-
rb_gsl_ntuple_select_fn_new, -1);
|
451
|
-
rb_define_method(cgsl_ntuple_select_fn, "set",
|
452
|
-
rb_gsl_ntuple_select_fn_set_f, -1);
|
453
|
-
rb_define_method(cgsl_ntuple_select_fn, "set_params",
|
454
|
-
rb_gsl_ntuple_select_fn_set_params, -1);
|
455
|
-
rb_define_method(cgsl_ntuple_select_fn, "params",
|
456
|
-
rb_gsl_ntuple_select_fn_params, 0);
|
457
|
-
|
458
|
-
rb_define_singleton_method(cgsl_ntuple_value_fn, "alloc",
|
459
|
-
rb_gsl_ntuple_value_fn_new, -1);
|
460
|
-
rb_define_method(cgsl_ntuple_value_fn, "set",
|
461
|
-
rb_gsl_ntuple_value_fn_set_f, -1);
|
462
|
-
rb_define_method(cgsl_ntuple_value_fn, "set_params",
|
463
|
-
rb_gsl_ntuple_value_fn_set_params, -1);
|
464
|
-
rb_define_method(cgsl_ntuple_value_fn, "params",
|
465
|
-
rb_gsl_ntuple_value_fn_params, 0);
|
466
|
-
|
467
|
-
rb_define_singleton_method(cgsl_ntuple, "project", rb_gsl_ntuple_project, 4);
|
468
|
-
rb_define_method(cgsl_ntuple, "project", rb_gsl_ntuple_project2, 3);
|
469
|
-
}
|