rb-gsl 1.16.0.5 → 1.16.0.6

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (612) hide show
  1. checksums.yaml +4 -4
  2. data/rb-gsl.gemspec +5 -10
  3. metadata +10 -713
  4. data/.gitignore +0 -12
  5. data/.travis.yml +0 -24
  6. data/AUTHORS +0 -12
  7. data/COPYING +0 -341
  8. data/ChangeLog +0 -621
  9. data/Gemfile +0 -4
  10. data/README.md +0 -77
  11. data/Rakefile +0 -20
  12. data/THANKS +0 -17
  13. data/examples/alf/alf.gp +0 -15
  14. data/examples/alf/alf.rb +0 -32
  15. data/examples/blas/blas.rb +0 -13
  16. data/examples/blas/dnrm2.rb +0 -16
  17. data/examples/blas/level1.rb +0 -81
  18. data/examples/blas/level2.rb +0 -11
  19. data/examples/blas/level3.rb +0 -12
  20. data/examples/bspline.rb +0 -57
  21. data/examples/cdf.rb +0 -16
  22. data/examples/cheb.rb +0 -21
  23. data/examples/combination.rb +0 -23
  24. data/examples/complex/RC-lpf.rb +0 -47
  25. data/examples/complex/add.rb +0 -36
  26. data/examples/complex/coerce.rb +0 -14
  27. data/examples/complex/complex.rb +0 -25
  28. data/examples/complex/fpmi.rb +0 -70
  29. data/examples/complex/functions.rb +0 -77
  30. data/examples/complex/michelson.rb +0 -36
  31. data/examples/complex/mul.rb +0 -28
  32. data/examples/complex/oscillator.rb +0 -17
  33. data/examples/complex/set.rb +0 -37
  34. data/examples/const/physconst.rb +0 -151
  35. data/examples/const/travel.rb +0 -45
  36. data/examples/deriv/demo.rb +0 -13
  37. data/examples/deriv/deriv.rb +0 -36
  38. data/examples/deriv/diff.rb +0 -35
  39. data/examples/dht.rb +0 -42
  40. data/examples/dirac.rb +0 -56
  41. data/examples/eigen/eigen.rb +0 -34
  42. data/examples/eigen/herm.rb +0 -22
  43. data/examples/eigen/narray.rb +0 -9
  44. data/examples/eigen/nonsymm.rb +0 -37
  45. data/examples/eigen/nonsymmv.rb +0 -43
  46. data/examples/eigen/qhoscillator.gp +0 -35
  47. data/examples/eigen/qhoscillator.rb +0 -90
  48. data/examples/eigen/vander.rb +0 -41
  49. data/examples/fft/fft.rb +0 -17
  50. data/examples/fft/fft2.rb +0 -17
  51. data/examples/fft/forward.rb +0 -25
  52. data/examples/fft/forward2.rb +0 -26
  53. data/examples/fft/radix2.rb +0 -18
  54. data/examples/fft/real-halfcomplex.rb +0 -33
  55. data/examples/fft/real-halfcomplex2.rb +0 -30
  56. data/examples/fft/realradix2.rb +0 -19
  57. data/examples/fft/sunspot.dat +0 -256
  58. data/examples/fft/sunspot.rb +0 -16
  59. data/examples/fit/expdata.dat +0 -20
  60. data/examples/fit/expfit.rb +0 -31
  61. data/examples/fit/gaussfit.rb +0 -29
  62. data/examples/fit/gaussian_2peaks.rb +0 -34
  63. data/examples/fit/hillfit.rb +0 -40
  64. data/examples/fit/lognormal.rb +0 -26
  65. data/examples/fit/lorentzfit.rb +0 -22
  66. data/examples/fit/multifit.rb +0 -72
  67. data/examples/fit/ndlinear.rb +0 -133
  68. data/examples/fit/nonlinearfit.rb +0 -89
  69. data/examples/fit/plot.gp +0 -36
  70. data/examples/fit/polyfit.rb +0 -9
  71. data/examples/fit/powerfit.rb +0 -21
  72. data/examples/fit/sigmoidfit.rb +0 -40
  73. data/examples/fit/sinfit.rb +0 -22
  74. data/examples/fit/wlinear.rb +0 -46
  75. data/examples/fresnel.rb +0 -11
  76. data/examples/function/function.rb +0 -36
  77. data/examples/function/log.rb +0 -7
  78. data/examples/function/min.rb +0 -33
  79. data/examples/function/sin.rb +0 -10
  80. data/examples/function/synchrotron.rb +0 -18
  81. data/examples/gallery/butterfly.rb +0 -7
  82. data/examples/gallery/cayley.rb +0 -12
  83. data/examples/gallery/cornu.rb +0 -23
  84. data/examples/gallery/eight.rb +0 -11
  85. data/examples/gallery/koch.rb +0 -40
  86. data/examples/gallery/lemniscate.rb +0 -11
  87. data/examples/gallery/polar.rb +0 -11
  88. data/examples/gallery/rgplot/cossin.rb +0 -35
  89. data/examples/gallery/rgplot/rgplot.replaced +0 -0
  90. data/examples/gallery/rgplot/roesller.rb +0 -55
  91. data/examples/gallery/roesller.rb +0 -39
  92. data/examples/gallery/scarabaeus.rb +0 -14
  93. data/examples/histogram/cauchy.rb +0 -27
  94. data/examples/histogram/cauchy.sh +0 -2
  95. data/examples/histogram/exponential.rb +0 -19
  96. data/examples/histogram/gauss.rb +0 -16
  97. data/examples/histogram/gsl-histogram.rb +0 -40
  98. data/examples/histogram/histo2d.rb +0 -31
  99. data/examples/histogram/histo3d.rb +0 -34
  100. data/examples/histogram/histogram-pdf.rb +0 -27
  101. data/examples/histogram/histogram.rb +0 -26
  102. data/examples/histogram/integral.rb +0 -28
  103. data/examples/histogram/poisson.rb +0 -27
  104. data/examples/histogram/power.rb +0 -25
  105. data/examples/histogram/rebin.rb +0 -17
  106. data/examples/histogram/smp.dat +0 -5
  107. data/examples/histogram/xexp.rb +0 -21
  108. data/examples/integration/ahmed.rb +0 -21
  109. data/examples/integration/cosmology.rb +0 -75
  110. data/examples/integration/friedmann.gp +0 -16
  111. data/examples/integration/friedmann.rb +0 -35
  112. data/examples/integration/gamma-zeta.rb +0 -35
  113. data/examples/integration/integration.rb +0 -22
  114. data/examples/integration/qag.rb +0 -8
  115. data/examples/integration/qag2.rb +0 -14
  116. data/examples/integration/qag3.rb +0 -8
  117. data/examples/integration/qagi.rb +0 -28
  118. data/examples/integration/qagi2.rb +0 -49
  119. data/examples/integration/qagiu.rb +0 -29
  120. data/examples/integration/qagp.rb +0 -20
  121. data/examples/integration/qags.rb +0 -14
  122. data/examples/integration/qawc.rb +0 -18
  123. data/examples/integration/qawf.rb +0 -41
  124. data/examples/integration/qawo.rb +0 -29
  125. data/examples/integration/qaws.rb +0 -30
  126. data/examples/integration/qng.rb +0 -17
  127. data/examples/interp/demo.gp +0 -20
  128. data/examples/interp/demo.rb +0 -45
  129. data/examples/interp/interp.rb +0 -37
  130. data/examples/interp/points +0 -10
  131. data/examples/interp/spline.rb +0 -20
  132. data/examples/jacobi/deriv.rb +0 -40
  133. data/examples/jacobi/integrate.rb +0 -34
  134. data/examples/jacobi/interp.rb +0 -43
  135. data/examples/jacobi/jacobi.rb +0 -11
  136. data/examples/linalg/HH.rb +0 -15
  137. data/examples/linalg/HH_narray.rb +0 -13
  138. data/examples/linalg/LQ_solve.rb +0 -73
  139. data/examples/linalg/LU.rb +0 -84
  140. data/examples/linalg/LU2.rb +0 -31
  141. data/examples/linalg/LU_narray.rb +0 -24
  142. data/examples/linalg/PTLQ.rb +0 -47
  143. data/examples/linalg/QR.rb +0 -18
  144. data/examples/linalg/QRPT.rb +0 -47
  145. data/examples/linalg/QR_solve.rb +0 -78
  146. data/examples/linalg/QR_solve_narray.rb +0 -13
  147. data/examples/linalg/SV.rb +0 -16
  148. data/examples/linalg/SV_narray.rb +0 -12
  149. data/examples/linalg/SV_solve.rb +0 -49
  150. data/examples/linalg/chol.rb +0 -29
  151. data/examples/linalg/chol_narray.rb +0 -15
  152. data/examples/linalg/complex.rb +0 -57
  153. data/examples/linalg/invert_narray.rb +0 -10
  154. data/examples/math/const.rb +0 -67
  155. data/examples/math/elementary.rb +0 -35
  156. data/examples/math/functions.rb +0 -41
  157. data/examples/math/inf_nan.rb +0 -34
  158. data/examples/math/minmax.rb +0 -22
  159. data/examples/math/power.rb +0 -18
  160. data/examples/math/test.rb +0 -31
  161. data/examples/matrix/a.dat +0 -0
  162. data/examples/matrix/add.rb +0 -45
  163. data/examples/matrix/b.dat +0 -4
  164. data/examples/matrix/cat.rb +0 -31
  165. data/examples/matrix/colvectors.rb +0 -24
  166. data/examples/matrix/complex.rb +0 -41
  167. data/examples/matrix/det.rb +0 -29
  168. data/examples/matrix/diagonal.rb +0 -23
  169. data/examples/matrix/get_all.rb +0 -159
  170. data/examples/matrix/hilbert.rb +0 -31
  171. data/examples/matrix/iterator.rb +0 -19
  172. data/examples/matrix/matrix.rb +0 -57
  173. data/examples/matrix/minmax.rb +0 -53
  174. data/examples/matrix/mul.rb +0 -39
  175. data/examples/matrix/rand.rb +0 -20
  176. data/examples/matrix/read.rb +0 -29
  177. data/examples/matrix/rowcol.rb +0 -47
  178. data/examples/matrix/set.rb +0 -41
  179. data/examples/matrix/set_all.rb +0 -100
  180. data/examples/matrix/view.rb +0 -32
  181. data/examples/matrix/view_all.rb +0 -148
  182. data/examples/matrix/write.rb +0 -23
  183. data/examples/min.rb +0 -29
  184. data/examples/monte/miser.rb +0 -47
  185. data/examples/monte/monte.rb +0 -47
  186. data/examples/monte/plain.rb +0 -47
  187. data/examples/monte/vegas.rb +0 -46
  188. data/examples/multimin/bundle.rb +0 -66
  189. data/examples/multimin/cqp.rb +0 -109
  190. data/examples/multimin/fdfminimizer.rb +0 -40
  191. data/examples/multimin/fminimizer.rb +0 -41
  192. data/examples/multiroot/demo.rb +0 -36
  193. data/examples/multiroot/fdfsolver.rb +0 -50
  194. data/examples/multiroot/fsolver.rb +0 -33
  195. data/examples/multiroot/fsolver2.rb +0 -32
  196. data/examples/multiroot/fsolver3.rb +0 -26
  197. data/examples/narray/histogram.rb +0 -14
  198. data/examples/narray/mandel.rb +0 -27
  199. data/examples/narray/narray.rb +0 -28
  200. data/examples/narray/narray2.rb +0 -44
  201. data/examples/narray/sf.rb +0 -26
  202. data/examples/ntuple/create.rb +0 -17
  203. data/examples/ntuple/project.rb +0 -31
  204. data/examples/odeiv/binarysystem.gp +0 -23
  205. data/examples/odeiv/binarysystem.rb +0 -104
  206. data/examples/odeiv/demo.gp +0 -24
  207. data/examples/odeiv/demo.rb +0 -69
  208. data/examples/odeiv/demo2.gp +0 -26
  209. data/examples/odeiv/duffing.rb +0 -45
  210. data/examples/odeiv/frei1.rb +0 -109
  211. data/examples/odeiv/frei2.rb +0 -76
  212. data/examples/odeiv/legendre.rb +0 -52
  213. data/examples/odeiv/odeiv.rb +0 -32
  214. data/examples/odeiv/odeiv2.rb +0 -45
  215. data/examples/odeiv/oscillator.rb +0 -42
  216. data/examples/odeiv/sedov.rb +0 -97
  217. data/examples/odeiv/whitedwarf.gp +0 -40
  218. data/examples/odeiv/whitedwarf.rb +0 -158
  219. data/examples/ool/conmin.rb +0 -100
  220. data/examples/ool/gencan.rb +0 -99
  221. data/examples/ool/pgrad.rb +0 -100
  222. data/examples/ool/spg.rb +0 -100
  223. data/examples/pdf/bernoulli.rb +0 -5
  224. data/examples/pdf/beta.rb +0 -7
  225. data/examples/pdf/binomiral.rb +0 -10
  226. data/examples/pdf/cauchy.rb +0 -6
  227. data/examples/pdf/chisq.rb +0 -8
  228. data/examples/pdf/exponential.rb +0 -7
  229. data/examples/pdf/exppow.rb +0 -6
  230. data/examples/pdf/fdist.rb +0 -7
  231. data/examples/pdf/flat.rb +0 -7
  232. data/examples/pdf/gamma.rb +0 -8
  233. data/examples/pdf/gauss-tail.rb +0 -5
  234. data/examples/pdf/gauss.rb +0 -6
  235. data/examples/pdf/geometric.rb +0 -5
  236. data/examples/pdf/gumbel.rb +0 -6
  237. data/examples/pdf/hypergeometric.rb +0 -11
  238. data/examples/pdf/landau.rb +0 -5
  239. data/examples/pdf/laplace.rb +0 -7
  240. data/examples/pdf/logarithmic.rb +0 -5
  241. data/examples/pdf/logistic.rb +0 -6
  242. data/examples/pdf/lognormal.rb +0 -6
  243. data/examples/pdf/neg-binomiral.rb +0 -10
  244. data/examples/pdf/pareto.rb +0 -7
  245. data/examples/pdf/pascal.rb +0 -10
  246. data/examples/pdf/poisson.rb +0 -5
  247. data/examples/pdf/rayleigh-tail.rb +0 -6
  248. data/examples/pdf/rayleigh.rb +0 -6
  249. data/examples/pdf/tdist.rb +0 -6
  250. data/examples/pdf/weibull.rb +0 -8
  251. data/examples/permutation/ex1.rb +0 -22
  252. data/examples/permutation/permutation.rb +0 -16
  253. data/examples/poly/bell.rb +0 -6
  254. data/examples/poly/bessel.rb +0 -6
  255. data/examples/poly/cheb.rb +0 -6
  256. data/examples/poly/cheb_II.rb +0 -6
  257. data/examples/poly/cubic.rb +0 -9
  258. data/examples/poly/demo.rb +0 -20
  259. data/examples/poly/eval.rb +0 -28
  260. data/examples/poly/eval_derivs.rb +0 -14
  261. data/examples/poly/fit.rb +0 -21
  262. data/examples/poly/hermite.rb +0 -6
  263. data/examples/poly/poly.rb +0 -13
  264. data/examples/poly/quadratic.rb +0 -25
  265. data/examples/random/diffusion.rb +0 -34
  266. data/examples/random/gaussian.rb +0 -9
  267. data/examples/random/generator.rb +0 -27
  268. data/examples/random/hdsobol.rb +0 -21
  269. data/examples/random/poisson.rb +0 -9
  270. data/examples/random/qrng.rb +0 -19
  271. data/examples/random/randomwalk.rb +0 -37
  272. data/examples/random/randomwalk2d.rb +0 -19
  273. data/examples/random/rayleigh.rb +0 -36
  274. data/examples/random/rng.rb +0 -33
  275. data/examples/random/rngextra.rb +0 -14
  276. data/examples/roots/bisection.rb +0 -25
  277. data/examples/roots/brent.rb +0 -43
  278. data/examples/roots/demo.rb +0 -30
  279. data/examples/roots/newton.rb +0 -46
  280. data/examples/roots/recombination.gp +0 -11
  281. data/examples/roots/recombination.rb +0 -61
  282. data/examples/roots/steffenson.rb +0 -48
  283. data/examples/sf/ShiChi.rb +0 -6
  284. data/examples/sf/SiCi.rb +0 -6
  285. data/examples/sf/airy_Ai.rb +0 -8
  286. data/examples/sf/airy_Bi.rb +0 -8
  287. data/examples/sf/bessel_IK.rb +0 -12
  288. data/examples/sf/bessel_JY.rb +0 -13
  289. data/examples/sf/beta_inc.rb +0 -9
  290. data/examples/sf/clausen.rb +0 -6
  291. data/examples/sf/dawson.rb +0 -5
  292. data/examples/sf/debye.rb +0 -9
  293. data/examples/sf/dilog.rb +0 -6
  294. data/examples/sf/ellint.rb +0 -6
  295. data/examples/sf/expint.rb +0 -8
  296. data/examples/sf/fermi.rb +0 -10
  297. data/examples/sf/gamma_inc_P.rb +0 -9
  298. data/examples/sf/gegenbauer.rb +0 -8
  299. data/examples/sf/hyperg.rb +0 -7
  300. data/examples/sf/laguerre.rb +0 -19
  301. data/examples/sf/lambertW.rb +0 -5
  302. data/examples/sf/legendre_P.rb +0 -10
  303. data/examples/sf/lngamma.rb +0 -5
  304. data/examples/sf/psi.rb +0 -54
  305. data/examples/sf/sphbessel.gp +0 -27
  306. data/examples/sf/sphbessel.rb +0 -30
  307. data/examples/sf/synchrotron.rb +0 -5
  308. data/examples/sf/transport.rb +0 -10
  309. data/examples/sf/zetam1.rb +0 -5
  310. data/examples/siman.rb +0 -44
  311. data/examples/sort/heapsort.rb +0 -23
  312. data/examples/sort/heapsort_vector_complex.rb +0 -21
  313. data/examples/sort/sort.rb +0 -23
  314. data/examples/sort/sort2.rb +0 -16
  315. data/examples/stats/mean.rb +0 -17
  316. data/examples/stats/statistics.rb +0 -18
  317. data/examples/stats/test.rb +0 -9
  318. data/examples/sum.rb +0 -34
  319. data/examples/tamu_anova.rb +0 -18
  320. data/examples/vector/a.dat +0 -0
  321. data/examples/vector/add.rb +0 -56
  322. data/examples/vector/b.dat +0 -4
  323. data/examples/vector/c.dat +0 -3
  324. data/examples/vector/collect.rb +0 -26
  325. data/examples/vector/compare.rb +0 -28
  326. data/examples/vector/complex.rb +0 -51
  327. data/examples/vector/complex_get_all.rb +0 -85
  328. data/examples/vector/complex_set_all.rb +0 -131
  329. data/examples/vector/complex_view_all.rb +0 -77
  330. data/examples/vector/connect.rb +0 -22
  331. data/examples/vector/decimate.rb +0 -38
  332. data/examples/vector/diff.rb +0 -31
  333. data/examples/vector/filescan.rb +0 -17
  334. data/examples/vector/floor.rb +0 -23
  335. data/examples/vector/get_all.rb +0 -82
  336. data/examples/vector/gnuplot.rb +0 -38
  337. data/examples/vector/graph.rb +0 -28
  338. data/examples/vector/histogram.rb +0 -22
  339. data/examples/vector/linspace.rb +0 -24
  340. data/examples/vector/log.rb +0 -17
  341. data/examples/vector/logic.rb +0 -33
  342. data/examples/vector/logspace.rb +0 -25
  343. data/examples/vector/minmax.rb +0 -47
  344. data/examples/vector/mul.rb +0 -49
  345. data/examples/vector/narray.rb +0 -46
  346. data/examples/vector/read.rb +0 -29
  347. data/examples/vector/set.rb +0 -35
  348. data/examples/vector/set_all.rb +0 -121
  349. data/examples/vector/smpv.dat +0 -15
  350. data/examples/vector/test.rb +0 -43
  351. data/examples/vector/test_gslblock.rb +0 -58
  352. data/examples/vector/vector.rb +0 -110
  353. data/examples/vector/view.rb +0 -35
  354. data/examples/vector/view_all.rb +0 -73
  355. data/examples/vector/where.rb +0 -29
  356. data/examples/vector/write.rb +0 -24
  357. data/examples/vector/zip.rb +0 -34
  358. data/examples/wavelet/ecg.dat +0 -256
  359. data/examples/wavelet/wavelet1.rb +0 -50
  360. data/ext/gsl_native/alf.c +0 -206
  361. data/ext/gsl_native/array.c +0 -553
  362. data/ext/gsl_native/array_complex.c +0 -245
  363. data/ext/gsl_native/blas.c +0 -28
  364. data/ext/gsl_native/blas1.c +0 -733
  365. data/ext/gsl_native/blas2.c +0 -1088
  366. data/ext/gsl_native/blas3.c +0 -880
  367. data/ext/gsl_native/block.c +0 -40
  368. data/ext/gsl_native/block_source.h +0 -885
  369. data/ext/gsl_native/bspline.c +0 -122
  370. data/ext/gsl_native/bundle.c +0 -3
  371. data/ext/gsl_native/cdf.c +0 -740
  372. data/ext/gsl_native/cheb.c +0 -531
  373. data/ext/gsl_native/combination.c +0 -275
  374. data/ext/gsl_native/common.c +0 -293
  375. data/ext/gsl_native/complex.c +0 -1002
  376. data/ext/gsl_native/const.c +0 -331
  377. data/ext/gsl_native/const_additional.c +0 -99
  378. data/ext/gsl_native/cqp.c +0 -283
  379. data/ext/gsl_native/deriv.c +0 -187
  380. data/ext/gsl_native/dht.c +0 -353
  381. data/ext/gsl_native/diff.c +0 -164
  382. data/ext/gsl_native/dirac.c +0 -388
  383. data/ext/gsl_native/eigen.c +0 -2322
  384. data/ext/gsl_native/error.c +0 -193
  385. data/ext/gsl_native/extconf.rb +0 -118
  386. data/ext/gsl_native/fft.c +0 -1095
  387. data/ext/gsl_native/fit.c +0 -204
  388. data/ext/gsl_native/fresnel.c +0 -312
  389. data/ext/gsl_native/function.c +0 -518
  390. data/ext/gsl_native/geometry.c +0 -139
  391. data/ext/gsl_native/graph.c +0 -1590
  392. data/ext/gsl_native/gsl.c +0 -259
  393. data/ext/gsl_native/gsl_narray.c +0 -794
  394. data/ext/gsl_native/histogram.c +0 -1964
  395. data/ext/gsl_native/histogram2d.c +0 -1042
  396. data/ext/gsl_native/histogram3d.c +0 -884
  397. data/ext/gsl_native/histogram3d_source.c +0 -749
  398. data/ext/gsl_native/histogram_find.c +0 -99
  399. data/ext/gsl_native/histogram_oper.c +0 -150
  400. data/ext/gsl_native/ieee.c +0 -88
  401. data/ext/gsl_native/include/rb_gsl.h +0 -136
  402. data/ext/gsl_native/include/rb_gsl_array.h +0 -214
  403. data/ext/gsl_native/include/rb_gsl_cheb.h +0 -19
  404. data/ext/gsl_native/include/rb_gsl_common.h +0 -348
  405. data/ext/gsl_native/include/rb_gsl_complex.h +0 -25
  406. data/ext/gsl_native/include/rb_gsl_const.h +0 -23
  407. data/ext/gsl_native/include/rb_gsl_dirac.h +0 -6
  408. data/ext/gsl_native/include/rb_gsl_eigen.h +0 -17
  409. data/ext/gsl_native/include/rb_gsl_fft.h +0 -49
  410. data/ext/gsl_native/include/rb_gsl_fit.h +0 -23
  411. data/ext/gsl_native/include/rb_gsl_function.h +0 -23
  412. data/ext/gsl_native/include/rb_gsl_graph.h +0 -68
  413. data/ext/gsl_native/include/rb_gsl_histogram.h +0 -63
  414. data/ext/gsl_native/include/rb_gsl_histogram3d.h +0 -97
  415. data/ext/gsl_native/include/rb_gsl_integration.h +0 -17
  416. data/ext/gsl_native/include/rb_gsl_interp.h +0 -41
  417. data/ext/gsl_native/include/rb_gsl_linalg.h +0 -21
  418. data/ext/gsl_native/include/rb_gsl_math.h +0 -20
  419. data/ext/gsl_native/include/rb_gsl_odeiv.h +0 -18
  420. data/ext/gsl_native/include/rb_gsl_poly.h +0 -67
  421. data/ext/gsl_native/include/rb_gsl_rational.h +0 -30
  422. data/ext/gsl_native/include/rb_gsl_rng.h +0 -20
  423. data/ext/gsl_native/include/rb_gsl_root.h +0 -22
  424. data/ext/gsl_native/include/rb_gsl_sf.h +0 -110
  425. data/ext/gsl_native/include/rb_gsl_statistics.h +0 -17
  426. data/ext/gsl_native/include/rb_gsl_tensor.h +0 -43
  427. data/ext/gsl_native/include/rb_gsl_with_narray.h +0 -31
  428. data/ext/gsl_native/include/templates_off.h +0 -87
  429. data/ext/gsl_native/include/templates_on.h +0 -241
  430. data/ext/gsl_native/integration.c +0 -1154
  431. data/ext/gsl_native/interp.c +0 -499
  432. data/ext/gsl_native/jacobi.c +0 -733
  433. data/ext/gsl_native/linalg.c +0 -3915
  434. data/ext/gsl_native/linalg_complex.c +0 -726
  435. data/ext/gsl_native/math.c +0 -706
  436. data/ext/gsl_native/matrix.c +0 -36
  437. data/ext/gsl_native/matrix_complex.c +0 -1733
  438. data/ext/gsl_native/matrix_double.c +0 -557
  439. data/ext/gsl_native/matrix_int.c +0 -255
  440. data/ext/gsl_native/matrix_source.h +0 -2708
  441. data/ext/gsl_native/min.c +0 -219
  442. data/ext/gsl_native/monte.c +0 -978
  443. data/ext/gsl_native/multifit.c +0 -1862
  444. data/ext/gsl_native/multimin.c +0 -778
  445. data/ext/gsl_native/multimin_fsdf.c +0 -156
  446. data/ext/gsl_native/multiroots.c +0 -952
  447. data/ext/gsl_native/multiset.c +0 -210
  448. data/ext/gsl_native/ndlinear.c +0 -320
  449. data/ext/gsl_native/nmf.c +0 -171
  450. data/ext/gsl_native/nmf_wrap.c +0 -75
  451. data/ext/gsl_native/ntuple.c +0 -469
  452. data/ext/gsl_native/odeiv.c +0 -947
  453. data/ext/gsl_native/ool.c +0 -879
  454. data/ext/gsl_native/permutation.c +0 -598
  455. data/ext/gsl_native/poly.c +0 -39
  456. data/ext/gsl_native/poly2.c +0 -265
  457. data/ext/gsl_native/poly_source.h +0 -1871
  458. data/ext/gsl_native/qrng.c +0 -160
  459. data/ext/gsl_native/randist.c +0 -1848
  460. data/ext/gsl_native/rational.c +0 -480
  461. data/ext/gsl_native/rng.c +0 -595
  462. data/ext/gsl_native/root.c +0 -407
  463. data/ext/gsl_native/sf.c +0 -1446
  464. data/ext/gsl_native/sf_airy.c +0 -200
  465. data/ext/gsl_native/sf_bessel.c +0 -871
  466. data/ext/gsl_native/sf_clausen.c +0 -28
  467. data/ext/gsl_native/sf_coulomb.c +0 -206
  468. data/ext/gsl_native/sf_coupling.c +0 -121
  469. data/ext/gsl_native/sf_dawson.c +0 -29
  470. data/ext/gsl_native/sf_debye.c +0 -148
  471. data/ext/gsl_native/sf_dilog.c +0 -43
  472. data/ext/gsl_native/sf_elementary.c +0 -46
  473. data/ext/gsl_native/sf_ellint.c +0 -206
  474. data/ext/gsl_native/sf_elljac.c +0 -30
  475. data/ext/gsl_native/sf_erfc.c +0 -89
  476. data/ext/gsl_native/sf_exp.c +0 -169
  477. data/ext/gsl_native/sf_expint.c +0 -201
  478. data/ext/gsl_native/sf_fermi_dirac.c +0 -148
  479. data/ext/gsl_native/sf_gamma.c +0 -343
  480. data/ext/gsl_native/sf_gegenbauer.c +0 -97
  481. data/ext/gsl_native/sf_hyperg.c +0 -203
  482. data/ext/gsl_native/sf_laguerre.c +0 -113
  483. data/ext/gsl_native/sf_lambert.c +0 -47
  484. data/ext/gsl_native/sf_legendre.c +0 -368
  485. data/ext/gsl_native/sf_log.c +0 -105
  486. data/ext/gsl_native/sf_mathieu.c +0 -235
  487. data/ext/gsl_native/sf_power.c +0 -47
  488. data/ext/gsl_native/sf_psi.c +0 -89
  489. data/ext/gsl_native/sf_synchrotron.c +0 -48
  490. data/ext/gsl_native/sf_transport.c +0 -76
  491. data/ext/gsl_native/sf_trigonometric.c +0 -210
  492. data/ext/gsl_native/sf_zeta.c +0 -115
  493. data/ext/gsl_native/signal.c +0 -303
  494. data/ext/gsl_native/siman.c +0 -713
  495. data/ext/gsl_native/sort.c +0 -207
  496. data/ext/gsl_native/spline.c +0 -377
  497. data/ext/gsl_native/stats.c +0 -787
  498. data/ext/gsl_native/sum.c +0 -168
  499. data/ext/gsl_native/tamu_anova.c +0 -56
  500. data/ext/gsl_native/tensor.c +0 -35
  501. data/ext/gsl_native/tensor_source.h +0 -1122
  502. data/ext/gsl_native/vector.c +0 -35
  503. data/ext/gsl_native/vector_complex.c +0 -2241
  504. data/ext/gsl_native/vector_double.c +0 -1433
  505. data/ext/gsl_native/vector_int.c +0 -202
  506. data/ext/gsl_native/vector_source.h +0 -3321
  507. data/ext/gsl_native/wavelet.c +0 -923
  508. data/lib/gsl.rb +0 -8
  509. data/lib/gsl/gnuplot.rb +0 -41
  510. data/lib/gsl/oper.rb +0 -43
  511. data/lib/gsl/version.rb +0 -3
  512. data/lib/ool.rb +0 -22
  513. data/lib/ool/conmin.rb +0 -30
  514. data/lib/rbgsl.rb +0 -1
  515. data/rdoc/alf.rdoc +0 -77
  516. data/rdoc/blas.rdoc +0 -269
  517. data/rdoc/bspline.rdoc +0 -42
  518. data/rdoc/changes.rdoc +0 -159
  519. data/rdoc/cheb.rdoc +0 -99
  520. data/rdoc/cholesky_complex.rdoc +0 -46
  521. data/rdoc/combi.rdoc +0 -125
  522. data/rdoc/complex.rdoc +0 -210
  523. data/rdoc/const.rdoc +0 -546
  524. data/rdoc/dht.rdoc +0 -122
  525. data/rdoc/diff.rdoc +0 -133
  526. data/rdoc/ehandling.rdoc +0 -50
  527. data/rdoc/eigen.rdoc +0 -401
  528. data/rdoc/fft.rdoc +0 -535
  529. data/rdoc/fit.rdoc +0 -284
  530. data/rdoc/function.rdoc +0 -94
  531. data/rdoc/graph.rdoc +0 -137
  532. data/rdoc/hist.rdoc +0 -409
  533. data/rdoc/hist2d.rdoc +0 -279
  534. data/rdoc/hist3d.rdoc +0 -112
  535. data/rdoc/integration.rdoc +0 -398
  536. data/rdoc/interp.rdoc +0 -231
  537. data/rdoc/intro.rdoc +0 -27
  538. data/rdoc/linalg.rdoc +0 -681
  539. data/rdoc/linalg_complex.rdoc +0 -88
  540. data/rdoc/math.rdoc +0 -276
  541. data/rdoc/matrix.rdoc +0 -1093
  542. data/rdoc/min.rdoc +0 -189
  543. data/rdoc/monte.rdoc +0 -234
  544. data/rdoc/multimin.rdoc +0 -312
  545. data/rdoc/multiroot.rdoc +0 -293
  546. data/rdoc/narray.rdoc +0 -177
  547. data/rdoc/ndlinear.rdoc +0 -250
  548. data/rdoc/nonlinearfit.rdoc +0 -348
  549. data/rdoc/ntuple.rdoc +0 -88
  550. data/rdoc/odeiv.rdoc +0 -378
  551. data/rdoc/perm.rdoc +0 -221
  552. data/rdoc/poly.rdoc +0 -335
  553. data/rdoc/qrng.rdoc +0 -90
  554. data/rdoc/randist.rdoc +0 -233
  555. data/rdoc/ref.rdoc +0 -93
  556. data/rdoc/rng.rdoc +0 -203
  557. data/rdoc/roots.rdoc +0 -305
  558. data/rdoc/sf.rdoc +0 -1622
  559. data/rdoc/siman.rdoc +0 -89
  560. data/rdoc/sort.rdoc +0 -94
  561. data/rdoc/start.rdoc +0 -16
  562. data/rdoc/stats.rdoc +0 -219
  563. data/rdoc/sum.rdoc +0 -65
  564. data/rdoc/tensor.rdoc +0 -251
  565. data/rdoc/tut.rdoc +0 -5
  566. data/rdoc/use.rdoc +0 -177
  567. data/rdoc/vector.rdoc +0 -1243
  568. data/rdoc/vector_complex.rdoc +0 -347
  569. data/rdoc/wavelet.rdoc +0 -218
  570. data/test/gsl/blas_test.rb +0 -79
  571. data/test/gsl/bspline_test.rb +0 -63
  572. data/test/gsl/cdf_test.rb +0 -1512
  573. data/test/gsl/cheb_test.rb +0 -80
  574. data/test/gsl/combination_test.rb +0 -100
  575. data/test/gsl/complex_test.rb +0 -20
  576. data/test/gsl/const_test.rb +0 -29
  577. data/test/gsl/deriv_test.rb +0 -62
  578. data/test/gsl/dht_test.rb +0 -79
  579. data/test/gsl/diff_test.rb +0 -53
  580. data/test/gsl/eigen_test.rb +0 -563
  581. data/test/gsl/err_test.rb +0 -23
  582. data/test/gsl/fit_test.rb +0 -101
  583. data/test/gsl/histo_test.rb +0 -14
  584. data/test/gsl/index_test.rb +0 -61
  585. data/test/gsl/integration_test.rb +0 -274
  586. data/test/gsl/interp_test.rb +0 -27
  587. data/test/gsl/linalg_test.rb +0 -463
  588. data/test/gsl/matrix_nmf_test.rb +0 -37
  589. data/test/gsl/matrix_test.rb +0 -98
  590. data/test/gsl/min_test.rb +0 -89
  591. data/test/gsl/monte_test.rb +0 -77
  592. data/test/gsl/multifit_test.rb +0 -753
  593. data/test/gsl/multimin_test.rb +0 -157
  594. data/test/gsl/multiroot_test.rb +0 -135
  595. data/test/gsl/multiset_test.rb +0 -52
  596. data/test/gsl/odeiv_test.rb +0 -275
  597. data/test/gsl/oper_test.rb +0 -98
  598. data/test/gsl/poly_test.rb +0 -338
  599. data/test/gsl/qrng_test.rb +0 -94
  600. data/test/gsl/quartic_test.rb +0 -28
  601. data/test/gsl/randist_test.rb +0 -122
  602. data/test/gsl/rng_test.rb +0 -303
  603. data/test/gsl/roots_test.rb +0 -78
  604. data/test/gsl/sf_test.rb +0 -2079
  605. data/test/gsl/stats_test.rb +0 -122
  606. data/test/gsl/sum_test.rb +0 -69
  607. data/test/gsl/tensor_test.rb +0 -396
  608. data/test/gsl/vector_test.rb +0 -223
  609. data/test/gsl/wavelet_test.rb +0 -130
  610. data/test/gsl_test.rb +0 -321
  611. data/test/test_helper.rb +0 -42
  612. data/uncrustify.cfg +0 -1693
@@ -1,171 +0,0 @@
1
- /**
2
- * NMF: Non-Negative Matrix Factorization
3
- *
4
- * Written by Roman Shterenzon
5
- * (Slightly modified by Y.Tsunesada: just added "const" qualifiers etc.)
6
- */
7
-
8
- #include <math.h>
9
- #include <time.h>
10
- #include <gsl/gsl_matrix.h>
11
- #include <gsl/gsl_blas.h> /* for multiplication */
12
-
13
- #define THRESH 0.000001
14
- #define MAXITER 1000
15
-
16
- #undef DEBUG
17
-
18
- #define mm(a, b) gsl_matrix_mult(a, b)
19
- //gsl_matrix * gsl_matrix_mult(gsl_matrix *a, gsl_matrix *b)
20
- gsl_matrix * gsl_matrix_mult(const gsl_matrix *a, const gsl_matrix *b)
21
- {
22
- gsl_matrix *c;
23
- c = gsl_matrix_alloc(a->size1, b->size2);
24
-
25
- gsl_blas_dgemm(CblasNoTrans, CblasNoTrans, 1.0, a, b, 0.0, c);
26
- return c;
27
- }
28
-
29
- // pretty print
30
- //void pp(gsl_matrix *m)
31
- void pp(const gsl_matrix *m)
32
- {
33
- int r, c;
34
-
35
- for(r = 0; r < (int) m->size1; r++) {
36
- for(c = 0; c < (int) m->size2; c++) {
37
- printf(" %.2f", gsl_matrix_get(m, r, c));
38
- }
39
- printf("\n");
40
- }
41
- }
42
-
43
- /* Returns a distance cost */
44
- //double difcost(gsl_matrix *a, gsl_matrix *b)
45
- double difcost(const gsl_matrix *a, const gsl_matrix *b)
46
- {
47
- int i, j;
48
- double dif = 0, d;
49
-
50
- for (i = 0; i < (int) a->size1; i++)
51
- {
52
- for (j = 0; j < (int) a->size2; j++)
53
- {
54
- d = gsl_matrix_get(a, i, j) - gsl_matrix_get(b, i, j);
55
- dif += d*d;
56
- // dif += pow(gsl_matrix_get(a, i, j) - gsl_matrix_get(b, i, j), 2);
57
- }
58
- }
59
- return dif;
60
- }
61
-
62
- static void initmatrix(gsl_matrix *m, double min, double max)
63
- {
64
- int i,j;
65
- double val;
66
-
67
- srand(time(NULL));
68
-
69
- for(i = 0; i < (int) m->size1; i++)
70
- {
71
- for(j = 0; j < (int) m->size2; j++)
72
- {
73
- val = min + (int) (max * (rand() / (RAND_MAX + min)));
74
- gsl_matrix_set(m, i, j, val);
75
- }
76
- }
77
- }
78
-
79
- static double update(gsl_matrix *v, gsl_matrix *w, gsl_matrix *h)
80
- {
81
- double dist = 0;
82
- gsl_matrix *wt = NULL, *ht = NULL, *wh = NULL;
83
- gsl_matrix *w_h = NULL, *wt_w = NULL;
84
- gsl_matrix *wt_v = NULL;
85
- gsl_matrix *v_ht = NULL, *wt_w_h = NULL, *w_h_ht = NULL;
86
-
87
- wt = gsl_matrix_alloc(w->size2, w->size1);
88
- gsl_matrix_transpose_memcpy(wt, w);
89
- ht = gsl_matrix_alloc(h->size2, h->size1);
90
- gsl_matrix_transpose_memcpy(ht, h);
91
-
92
- // wt * v
93
- wt_v = mm(wt, v);
94
-
95
- // wt * w * h
96
- wt_w = mm(wt, w);
97
- wt_w_h = mm(wt_w, h);
98
- gsl_matrix_free(wt_w);
99
-
100
- // h = h.mul_elements(wt * v).div_elements(wt * w * h)
101
- gsl_matrix_mul_elements(h, wt_v);
102
- gsl_matrix_div_elements(h, wt_w_h);
103
- gsl_matrix_free(wt_v);
104
- gsl_matrix_free(wt_w_h);
105
-
106
- // v * ht
107
- v_ht = mm(v, ht);
108
-
109
- // w * h * ht
110
- w_h = mm(w, h);
111
- w_h_ht = mm(w_h, ht);
112
- gsl_matrix_free(w_h);
113
-
114
- // w = w.mul_elements(v * ht).div_elements(w * h * ht)
115
- gsl_matrix_mul_elements(w, v_ht);
116
- gsl_matrix_div_elements(w, w_h_ht);
117
- gsl_matrix_free(v_ht);
118
- gsl_matrix_free(w_h_ht);
119
-
120
- gsl_matrix_free(wt);
121
- gsl_matrix_free(ht);
122
-
123
- wh = mm(w, h);
124
- dist = difcost(v, wh);
125
- gsl_matrix_free(wh);
126
-
127
- // w and h were modified in place
128
- return dist;
129
- }
130
-
131
- /* The main thing - compute the nmf */
132
- int gsl_matrix_nmf(gsl_matrix *v, int cols, gsl_matrix **w, gsl_matrix **h)
133
- {
134
- double dist = 1;
135
- int iter = 1;
136
- double min, max;
137
-
138
- #ifdef DEBUG
139
- printf("\nCols: %d\nv:\n", cols);
140
- pp(v);
141
- #endif
142
-
143
- gsl_matrix_minmax(v, &min, &max);
144
-
145
- #ifdef DEBUG
146
- printf("Min: %f, Max: %f\n", min, max);
147
- #endif
148
- *w = gsl_matrix_alloc(v->size1, cols);
149
- initmatrix(*w, min, max/2); // the multiplicative rules tend to increase w
150
-
151
- *h = gsl_matrix_alloc(cols, v->size2);
152
- initmatrix(*h, min, max);
153
-
154
- while(dist >= THRESH && iter < MAXITER)
155
- {
156
- dist = update(v, *w, *h);
157
- #ifdef DEBUG
158
- printf("Iteration: %d, distance: %f\n", iter, dist);
159
- printf("\nw:\n");
160
- pp(*w);
161
- printf("\nh:\n");
162
- pp(*h);
163
- printf("\n");
164
- #endif
165
- iter++;
166
- }
167
- #ifdef DEBUG
168
- printf("Ended\n");
169
- #endif
170
- return GSL_SUCCESS;
171
- }
@@ -1,75 +0,0 @@
1
- /**
2
- * NMF: Non-Negative Matrix Factorization - Ruby wrapper
3
- *
4
- * Written by Roman Shterenzon
5
- *
6
- */
7
-
8
- #include <ruby.h>
9
- #include <gsl/gsl_matrix.h>
10
-
11
- int gsl_matrix_nmf(gsl_matrix *v, int cols, gsl_matrix **w, gsl_matrix **h);
12
- //double difcost(gsl_matrix *a, gsl_matrix *b);
13
- double difcost(const gsl_matrix *a, const gsl_matrix *b);
14
-
15
- //VALUE mNMF;
16
- static VALUE mNMF;
17
- extern VALUE cgsl_matrix;
18
-
19
- /*
20
- * call-seq:
21
- * nmf(GSL::Matrix, columns) -> [GSL::Matrix, GSL::Matrix]
22
- *
23
- * Calculates the NMF of the given +matrix+, returns the W and H matrices
24
- */
25
- static VALUE nmf_wrap(VALUE obj, VALUE matrix, VALUE cols)
26
- {
27
- gsl_matrix *w, *h, *m;
28
- unsigned int c;
29
- VALUE arr;
30
-
31
- if ( !FIXNUM_P(cols) || (c = NUM2INT(cols)) <= 0 ) {
32
- rb_raise(rb_eArgError, "Number of columns should be a positive integer.");
33
- }
34
- arr = rb_ary_new2(2);
35
- Data_Get_Struct(matrix, gsl_matrix, m);
36
-
37
- /* compute the NMF */
38
- gsl_matrix_nmf(m, c, &w, &h);
39
-
40
- rb_ary_push(arr, Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, w));
41
- rb_ary_push(arr, Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, h));
42
-
43
- return arr;
44
- }
45
-
46
- /*
47
- * call-seq:
48
- * difcost(GSL::Matrix, GSL::Matrix) -> Float
49
- *
50
- * Calculates the geometric distance between two matrices
51
- */
52
- static VALUE difcost_wrap(VALUE obj, VALUE matrix1, VALUE matrix2)
53
- {
54
- gsl_matrix *m1, *m2;
55
- Data_Get_Struct(matrix1, gsl_matrix, m1);
56
- Data_Get_Struct(matrix2, gsl_matrix, m2);
57
- return rb_float_new(difcost(m1, m2));
58
- }
59
-
60
- /* call-seq:
61
- * nmf(cols) -> [GSL::Matrix, GSL::Matrix]
62
- */
63
- static VALUE matrix_nmf(VALUE obj, VALUE cols)
64
- {
65
- // nmf_wrap(cgsl_matrix, obj, cols);
66
- return nmf_wrap(cgsl_matrix, obj, cols);
67
- }
68
-
69
- void Init_gsl_matrix_nmf(void) {
70
- mNMF = rb_define_module_under(cgsl_matrix, "NMF");
71
-
72
- rb_define_singleton_method(mNMF, "nmf", nmf_wrap, 2);
73
- rb_define_singleton_method(mNMF, "difcost", difcost_wrap, 2);
74
- rb_define_method(cgsl_matrix, "nmf", matrix_nmf, 1);
75
- }
@@ -1,469 +0,0 @@
1
- /*
2
- ntuple.c
3
- Ruby/GSL: Ruby extension library for GSL (GNU Scientific Library)
4
- (C) Copyright 2001-2006 by Yoshiki Tsunesada
5
-
6
- Ruby/GSL is free software: you can redistribute it and/or modify it
7
- under the terms of the GNU General Public License.
8
- This library is distributed in the hope that it will be useful, but
9
- WITHOUT ANY WARRANTY.
10
- */
11
-
12
- #include "include/rb_gsl.h"
13
- #include "include/rb_gsl_array.h"
14
- #include "include/rb_gsl_function.h"
15
- #include "include/rb_gsl_histogram.h"
16
- #include <gsl/gsl_ntuple.h>
17
-
18
- static VALUE cgsl_ntuple;
19
- static VALUE cgsl_ntuple_select_fn;
20
- static VALUE cgsl_ntuple_value_fn;
21
-
22
- static VALUE rb_gsl_ntuple_new(int argc, VALUE *argv, VALUE klass)
23
- {
24
- gsl_vector *v = NULL;
25
- gsl_matrix *m = NULL;
26
- gsl_ntuple *n = NULL;
27
- double *data = NULL;
28
- size_t size;
29
- switch (argc) {
30
- case 2:
31
- case 3:
32
- if (VECTOR_P(argv[1])) {
33
- Data_Get_Struct(argv[1], gsl_vector, v);
34
- data = v->data;
35
- size = v->size;
36
- } else if (MATRIX_P(argv[1])) {
37
- Data_Get_Struct(argv[1], gsl_matrix, m);
38
- data = m->data;
39
- size = m->size1*m->size2;
40
- } else {
41
- rb_raise(rb_eTypeError, "Vector or Matrix expected");
42
- }
43
- if (argc == 3) size = FIX2INT(argv[2]);
44
- break;
45
- default:
46
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 2 or 3)", argc);
47
- break;
48
- }
49
- n = gsl_ntuple_create(STR2CSTR(argv[0]), data, size*sizeof(double));
50
- return Data_Wrap_Struct(klass, 0, gsl_ntuple_close, n);
51
- }
52
-
53
- VALUE rb_gsl_ntuple_open(int argc, VALUE *argv, VALUE klass)
54
- {
55
- gsl_vector *v = NULL;
56
- gsl_matrix *m = NULL;
57
- gsl_ntuple *n = NULL;
58
- double *data = NULL;
59
- size_t size;
60
- switch (argc) {
61
- case 2:
62
- case 3:
63
- if (VECTOR_P(argv[1])) {
64
- Data_Get_Struct(argv[1], gsl_vector, v);
65
- data = v->data;
66
- size = v->size;
67
- } else if (MATRIX_P(argv[1])) {
68
- Data_Get_Struct(argv[1], gsl_matrix, m);
69
- data = m->data;
70
- size = m->size1*m->size2;
71
- } else {
72
- rb_raise(rb_eTypeError, "Vector or Matrix expected");
73
- }
74
- if (argc == 3) size = FIX2INT(argv[2]);
75
- break;
76
- default:
77
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 2 or 3)", argc);
78
- break;
79
- }
80
- n = gsl_ntuple_open(STR2CSTR(argv[0]), data, size*sizeof(double));
81
- return Data_Wrap_Struct(klass, 0, gsl_ntuple_close, n);
82
- }
83
-
84
- VALUE rb_gsl_ntuple_write(VALUE obj)
85
- {
86
- gsl_ntuple *n = NULL;
87
- Data_Get_Struct(obj, gsl_ntuple, n);
88
- gsl_ntuple_write(n);
89
- return obj;
90
- }
91
-
92
- VALUE rb_gsl_ntuple_bookdata(VALUE obj)
93
- {
94
- gsl_ntuple *n = NULL;
95
- Data_Get_Struct(obj, gsl_ntuple, n);
96
- gsl_ntuple_bookdata(n);
97
- return obj;
98
- }
99
-
100
- VALUE rb_gsl_ntuple_read(VALUE obj)
101
- {
102
- gsl_ntuple *n = NULL;
103
- Data_Get_Struct(obj, gsl_ntuple, n);
104
- gsl_ntuple_read(n);
105
- return obj;
106
- }
107
-
108
- VALUE rb_gsl_ntuple_close(VALUE klass, VALUE obj)
109
- {
110
- gsl_ntuple *n = NULL;
111
- Data_Get_Struct(obj, gsl_ntuple, n);
112
- gsl_ntuple_close(n);
113
- return Qnil;
114
- }
115
-
116
- VALUE rb_gsl_ntuple_size(VALUE klass, VALUE obj)
117
- {
118
- gsl_ntuple *n = NULL;
119
- Data_Get_Struct(obj, gsl_ntuple, n);
120
- return INT2FIX(n->size);
121
- }
122
-
123
- VALUE rb_gsl_ntuple_data(VALUE obj)
124
- {
125
- gsl_ntuple *n = NULL;
126
- gsl_vector_view *v = NULL;
127
- Data_Get_Struct(obj, gsl_ntuple, n);
128
- v = gsl_vector_view_alloc();
129
- v->vector.size = n->size;
130
- v->vector.data = n->ntuple_data;
131
- return Data_Wrap_Struct(cgsl_vector_view, 0, gsl_vector_view_free, v);
132
- }
133
-
134
- /***** select_fn *****/
135
-
136
- static gsl_ntuple_select_fn* gsl_ntuple_select_fn_alloc();
137
- static void gsl_ntuple_select_fn_free(gsl_ntuple_select_fn *ptr);
138
- int rb_gsl_ntuple_select_fn_f(void *data, void *p);
139
- static void gsl_ntuple_select_fn_mark(gsl_ntuple_select_fn *ptr);
140
-
141
- static gsl_ntuple_select_fn* gsl_ntuple_select_fn_alloc()
142
- {
143
- gsl_ntuple_select_fn *ptr = NULL;
144
- ptr = ALLOC(gsl_ntuple_select_fn);
145
- if (ptr == NULL) rb_raise(rb_eRuntimeError, "malloc failed");
146
- ptr->function = &rb_gsl_ntuple_select_fn_f;
147
- /* (VALUE) ptr->params = rb_ary_new2(3);*/
148
- ptr->params = (void *) rb_ary_new2(3);
149
- rb_ary_store((VALUE) ptr->params, 1, Qnil);
150
- return ptr;
151
- }
152
-
153
- static void gsl_ntuple_select_fn_free(gsl_ntuple_select_fn *ptr)
154
- {
155
- free((gsl_ntuple_select_fn *) ptr);
156
- }
157
-
158
- static void gsl_ntuple_select_fn_mark(gsl_ntuple_select_fn *ptr)
159
- {
160
- rb_gc_mark((VALUE) ptr->params);
161
- }
162
-
163
- static VALUE rb_gsl_ntuple_select_fn_set_f(int argc, VALUE *argv, VALUE obj)
164
- {
165
- gsl_ntuple_select_fn *F = NULL;
166
- VALUE ary, ary2;
167
- size_t i;
168
- Data_Get_Struct(obj, gsl_ntuple_select_fn, F);
169
- if (F->params == NULL) {
170
- ary = rb_ary_new2(3);
171
- /* (VALUE) F->params = ary;*/
172
- F->params = (void *) ary;
173
- } else {
174
- ary = (VALUE) F->params;
175
- }
176
- rb_ary_store(ary, 1, Qnil);
177
-
178
- switch (argc) {
179
- case 0:
180
- break;
181
- case 1:
182
- CHECK_PROC(argv[0]);
183
- rb_ary_store(ary, 0, argv[0]);
184
- break;
185
- case 2:
186
- CHECK_PROC(argv[0]);
187
- rb_ary_store(ary, 0, argv[0]);
188
- rb_ary_store(ary, 1, argv[1]);
189
- break;
190
- default:
191
- CHECK_PROC(argv[0]);
192
- rb_ary_store(ary, 0, argv[0]);
193
- ary2 = rb_ary_new2(argc-1);
194
- for (i = 1; (int) i < argc; i++) rb_ary_store(ary2, i-1, argv[i]);
195
- rb_ary_store(ary, 1, ary2);
196
- break;
197
- }
198
- if (rb_block_given_p()) rb_ary_store(ary, 0, rb_block_proc());
199
- return obj;
200
- }
201
-
202
- int rb_gsl_ntuple_select_fn_f(void *data, void *p)
203
- {
204
- VALUE result, ary, proc, params, vv;
205
- gsl_vector_view vtmp;
206
- size_t size;
207
- ary = (VALUE) p;
208
- proc = rb_ary_entry(ary, 0);
209
- params = rb_ary_entry(ary, 1);
210
- size = FIX2INT(rb_ary_entry(ary, 2));
211
- vtmp.vector.data = (double *) data;
212
- vtmp.vector.size = size;
213
- vtmp.vector.stride = 1;
214
- vv = Data_Wrap_Struct(cgsl_vector_view, 0, NULL, &vtmp);
215
- if (NIL_P(params)) result = rb_funcall(proc, RBGSL_ID_call, 1, vv);
216
- else result = rb_funcall(proc, RBGSL_ID_call, 2, vv, params);
217
- return FIX2INT(result);
218
- }
219
-
220
- static VALUE rb_gsl_ntuple_select_fn_params(VALUE obj)
221
- {
222
- gsl_ntuple_select_fn *F = NULL;
223
- Data_Get_Struct(obj, gsl_ntuple_select_fn, F);
224
- return rb_ary_entry((VALUE) F->params, 1);
225
- }
226
-
227
- static VALUE rb_gsl_ntuple_select_fn_set_params(int argc, VALUE *argv, VALUE obj)
228
- {
229
- gsl_ntuple_select_fn *F = NULL;
230
- VALUE ary, ary2;
231
- size_t i;
232
- if (argc == 0) return obj;
233
- Data_Get_Struct(obj, gsl_ntuple_select_fn, F);
234
- ary = (VALUE) F->params;
235
- if (argc == 1) {
236
- rb_ary_store(ary, 1, argv[0]);
237
- } else {
238
- ary2 = rb_ary_new2(argc);
239
- for (i = 0; (int) i < argc; i++) rb_ary_store(ary2, i, argv[i]);
240
- rb_ary_store(ary, 1, ary2);
241
- }
242
- return obj;
243
- }
244
-
245
- static VALUE rb_gsl_ntuple_select_fn_new(int argc, VALUE *argv, VALUE klass)
246
- {
247
- gsl_ntuple_select_fn *F = NULL;
248
- VALUE ff;
249
- F = gsl_ntuple_select_fn_alloc();
250
- ff = Data_Wrap_Struct(klass, gsl_ntuple_select_fn_mark, gsl_ntuple_select_fn_free, F);
251
- rb_gsl_ntuple_select_fn_set_f(argc, argv, ff);
252
- return ff;
253
- }
254
-
255
- /***** value_fn *****/
256
- static gsl_ntuple_value_fn* gsl_ntuple_value_fn_alloc();
257
- static void gsl_ntuple_value_fn_free(gsl_ntuple_value_fn *ptr);
258
- static double rb_gsl_ntuple_value_fn_f(void *data, void *p);
259
- static void gsl_ntuple_value_fn_mark(gsl_ntuple_value_fn *ptr);
260
-
261
- static gsl_ntuple_value_fn* gsl_ntuple_value_fn_alloc()
262
- {
263
- gsl_ntuple_value_fn *ptr = NULL;
264
- ptr = ALLOC(gsl_ntuple_value_fn);
265
- if (ptr == NULL) rb_raise(rb_eRuntimeError, "malloc failed");
266
- ptr->function = &rb_gsl_ntuple_value_fn_f;
267
- /* (VALUE) ptr->params = rb_ary_new2(3);*/
268
- ptr->params = (void *) rb_ary_new2(3);
269
- rb_ary_store((VALUE) ptr->params, 1, Qnil);
270
- return ptr;
271
- }
272
-
273
- static void gsl_ntuple_value_fn_mark(gsl_ntuple_value_fn *ptr)
274
- {
275
- rb_gc_mark((VALUE) ptr->params);
276
- }
277
-
278
- static void gsl_ntuple_value_fn_free(gsl_ntuple_value_fn *ptr)
279
- {
280
- free((gsl_ntuple_value_fn *) ptr);
281
- }
282
-
283
- static VALUE rb_gsl_ntuple_value_fn_set_f(int argc, VALUE *argv, VALUE obj)
284
- {
285
- gsl_ntuple_value_fn *F = NULL;
286
- VALUE ary, ary2;
287
- size_t i;
288
- Data_Get_Struct(obj, gsl_ntuple_value_fn, F);
289
- if (F->params == NULL) {
290
- ary = rb_ary_new2(3);
291
- /* (VALUE) F->params = ary;*/
292
- F->params = (void *) ary;
293
- } else {
294
- ary = (VALUE) F->params;
295
- }
296
- rb_ary_store(ary, 1, Qnil);
297
- switch (argc) {
298
- case 0:
299
- break;
300
- case 1:
301
- CHECK_PROC(argv[0]);
302
- rb_ary_store(ary, 0, argv[0]);
303
- break;
304
- case 2:
305
- CHECK_PROC(argv[0]);
306
- rb_ary_store(ary, 0, argv[0]);
307
- rb_ary_store(ary, 1, argv[1]);
308
- break;
309
- default:
310
- CHECK_PROC(argv[0]);
311
- rb_ary_store(ary, 0, argv[0]);
312
- ary2 = rb_ary_new2(argc-1);
313
- for (i = 1; (int) i < argc; i++) rb_ary_store(ary2, i-1, argv[i]);
314
- rb_ary_store(ary, 1, ary2);
315
- break;
316
- }
317
- if (rb_block_given_p()) rb_ary_store(ary, 0, rb_block_proc());
318
- return obj;
319
- }
320
-
321
- static double rb_gsl_ntuple_value_fn_f(void *data, void *p)
322
- {
323
- VALUE result, ary, proc, params, vv;
324
- gsl_vector_view vtmp;
325
- ary = (VALUE) p;
326
- proc = rb_ary_entry(ary, 0);
327
- params = rb_ary_entry(ary, 1);
328
- vtmp.vector.data = (double *) data;
329
- vtmp.vector.size = FIX2INT(rb_ary_entry(ary, 2));
330
- vtmp.vector.stride = 1;
331
- vv = Data_Wrap_Struct(cgsl_vector_view, 0, NULL, &vtmp);
332
- if (NIL_P(params)) result = rb_funcall(proc, RBGSL_ID_call, 1, vv);
333
- else result = rb_funcall(proc, RBGSL_ID_call, 2, vv, params);
334
- return NUM2DBL(result);
335
- }
336
-
337
- static VALUE rb_gsl_ntuple_value_fn_params(VALUE obj)
338
- {
339
- gsl_ntuple_value_fn *F = NULL;
340
- Data_Get_Struct(obj, gsl_ntuple_value_fn, F);
341
- return rb_ary_entry((VALUE) F->params, 1);
342
- }
343
-
344
- static VALUE rb_gsl_ntuple_value_fn_set_params(int argc, VALUE *argv, VALUE obj)
345
- {
346
- gsl_ntuple_value_fn *F = NULL;
347
- VALUE ary, ary2;
348
- size_t i;
349
- if (argc == 0) return obj;
350
- Data_Get_Struct(obj, gsl_ntuple_value_fn, F);
351
- ary = (VALUE) F->params;
352
- if (argc == 1) {
353
- rb_ary_store(ary, 1, argv[0]);
354
- } else {
355
- ary2 = rb_ary_new2(argc);
356
- for (i = 0; (int) i < argc; i++) rb_ary_store(ary2, i, argv[i]);
357
- rb_ary_store(ary, 1, ary2);
358
- }
359
- return obj;
360
- }
361
-
362
-
363
- static VALUE rb_gsl_ntuple_value_fn_new(int argc, VALUE *argv, VALUE klass)
364
- {
365
- gsl_ntuple_value_fn *F = NULL;
366
- VALUE ff;
367
- F = gsl_ntuple_value_fn_alloc();
368
- ff = Data_Wrap_Struct(klass, gsl_ntuple_value_fn_mark, gsl_ntuple_value_fn_free, F);
369
- rb_gsl_ntuple_value_fn_set_f(argc, argv, ff);
370
- return ff;
371
- }
372
-
373
- /* singleton method */
374
- static VALUE rb_gsl_ntuple_project(VALUE obj, VALUE hh, VALUE nn,
375
- VALUE vvfn, VALUE vsfn)
376
- {
377
- gsl_histogram *h = NULL;
378
- gsl_ntuple *n = NULL;
379
- gsl_ntuple_value_fn *vfn = NULL;
380
- gsl_ntuple_select_fn *sfn = NULL;
381
- int status;
382
- size_t size;
383
- if (!rb_obj_is_kind_of(hh, cgsl_histogram))
384
- rb_raise(rb_eTypeError, "argument 1: Histogram expected");
385
- Data_Get_Struct(hh, gsl_histogram, h);
386
- if (!rb_obj_is_kind_of(nn, cgsl_ntuple))
387
- rb_raise(rb_eTypeError, "argument 2: Ntuple expected");
388
- Data_Get_Struct(nn, gsl_ntuple, n);
389
- if (!rb_obj_is_kind_of(vvfn, cgsl_ntuple_value_fn))
390
- rb_raise(rb_eTypeError, "argument 3: Ntuple::ValueFn expected");
391
- Data_Get_Struct(vvfn, gsl_ntuple_value_fn, vfn);
392
- if (!rb_obj_is_kind_of(vsfn, cgsl_ntuple_select_fn))
393
- rb_raise(rb_eTypeError, "argument 4: Ntuple::SelectFn expected");
394
- Data_Get_Struct(vsfn, gsl_ntuple_select_fn, sfn);
395
-
396
- size = n->size/sizeof(double);
397
- rb_ary_store((VALUE) vfn->params, 2, INT2FIX(size));
398
- rb_ary_store((VALUE) sfn->params, 2, INT2FIX(size));
399
- status = gsl_ntuple_project(h, n, vfn, sfn);
400
- return INT2FIX(status);
401
- }
402
-
403
- /* method */
404
- static VALUE rb_gsl_ntuple_project2(VALUE obj, VALUE hh, VALUE vvfn, VALUE vsfn)
405
- {
406
- gsl_histogram *h = NULL;
407
- gsl_ntuple *n = NULL;
408
- gsl_ntuple_value_fn *vfn = NULL;
409
- gsl_ntuple_select_fn *sfn = NULL;
410
- int status;
411
- size_t size;
412
- CHECK_HISTOGRAM(hh);
413
- Data_Get_Struct(obj, gsl_ntuple, n);
414
- Data_Get_Struct(hh, gsl_histogram, h);
415
- if (!rb_obj_is_kind_of(vvfn, cgsl_ntuple_value_fn))
416
- rb_raise(rb_eTypeError, "argument 2: Ntuple::ValueFn expected");
417
- Data_Get_Struct(vvfn, gsl_ntuple_value_fn, vfn);
418
- if (!rb_obj_is_kind_of(vsfn, cgsl_ntuple_select_fn))
419
- rb_raise(rb_eTypeError, "argument 3: Ntuple::SelectFn expected");
420
- Data_Get_Struct(vsfn, gsl_ntuple_select_fn, sfn);
421
- size = n->size/sizeof(double);
422
- rb_ary_store((VALUE) vfn->params, 2, INT2FIX(size));
423
- rb_ary_store((VALUE) sfn->params, 2, INT2FIX(size));
424
- status = gsl_ntuple_project(h, n, vfn, sfn);
425
- return INT2FIX(status);
426
- }
427
-
428
- void Init_gsl_ntuple(VALUE module)
429
- {
430
- cgsl_ntuple = rb_define_class_under(module, "Ntuple", cGSL_Object);
431
- cgsl_ntuple_select_fn = rb_define_class_under(cgsl_ntuple, "SelectFn", cGSL_Object);
432
- cgsl_ntuple_value_fn = rb_define_class_under(cgsl_ntuple, "ValueFn", cGSL_Object);
433
-
434
- rb_define_singleton_method(cgsl_ntuple, "create", rb_gsl_ntuple_new, -1);
435
- rb_define_singleton_method(cgsl_ntuple, "alloc", rb_gsl_ntuple_new, -1);
436
- rb_define_singleton_method(cgsl_ntuple, "open", rb_gsl_ntuple_open, -1);
437
- rb_define_singleton_method(cgsl_ntuple, "close", rb_gsl_ntuple_close, 0);
438
-
439
- rb_define_method(cgsl_ntuple, "size", rb_gsl_ntuple_size, 0);
440
- rb_define_method(cgsl_ntuple, "write", rb_gsl_ntuple_write, 0);
441
- rb_define_method(cgsl_ntuple, "bookdata", rb_gsl_ntuple_bookdata, 0);
442
-
443
- rb_define_method(cgsl_ntuple, "read", rb_gsl_ntuple_read, 0);
444
-
445
- rb_define_method(cgsl_ntuple, "data", rb_gsl_ntuple_data, 0);
446
- rb_define_alias(cgsl_ntuple, "get_data", "data");
447
- rb_define_alias(cgsl_ntuple, "ntuple_data", "data");
448
-
449
- rb_define_singleton_method(cgsl_ntuple_select_fn, "alloc",
450
- rb_gsl_ntuple_select_fn_new, -1);
451
- rb_define_method(cgsl_ntuple_select_fn, "set",
452
- rb_gsl_ntuple_select_fn_set_f, -1);
453
- rb_define_method(cgsl_ntuple_select_fn, "set_params",
454
- rb_gsl_ntuple_select_fn_set_params, -1);
455
- rb_define_method(cgsl_ntuple_select_fn, "params",
456
- rb_gsl_ntuple_select_fn_params, 0);
457
-
458
- rb_define_singleton_method(cgsl_ntuple_value_fn, "alloc",
459
- rb_gsl_ntuple_value_fn_new, -1);
460
- rb_define_method(cgsl_ntuple_value_fn, "set",
461
- rb_gsl_ntuple_value_fn_set_f, -1);
462
- rb_define_method(cgsl_ntuple_value_fn, "set_params",
463
- rb_gsl_ntuple_value_fn_set_params, -1);
464
- rb_define_method(cgsl_ntuple_value_fn, "params",
465
- rb_gsl_ntuple_value_fn_params, 0);
466
-
467
- rb_define_singleton_method(cgsl_ntuple, "project", rb_gsl_ntuple_project, 4);
468
- rb_define_method(cgsl_ntuple, "project", rb_gsl_ntuple_project2, 3);
469
- }