rb-gsl 1.16.0.5 → 1.16.0.6

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (612) hide show
  1. checksums.yaml +4 -4
  2. data/rb-gsl.gemspec +5 -10
  3. metadata +10 -713
  4. data/.gitignore +0 -12
  5. data/.travis.yml +0 -24
  6. data/AUTHORS +0 -12
  7. data/COPYING +0 -341
  8. data/ChangeLog +0 -621
  9. data/Gemfile +0 -4
  10. data/README.md +0 -77
  11. data/Rakefile +0 -20
  12. data/THANKS +0 -17
  13. data/examples/alf/alf.gp +0 -15
  14. data/examples/alf/alf.rb +0 -32
  15. data/examples/blas/blas.rb +0 -13
  16. data/examples/blas/dnrm2.rb +0 -16
  17. data/examples/blas/level1.rb +0 -81
  18. data/examples/blas/level2.rb +0 -11
  19. data/examples/blas/level3.rb +0 -12
  20. data/examples/bspline.rb +0 -57
  21. data/examples/cdf.rb +0 -16
  22. data/examples/cheb.rb +0 -21
  23. data/examples/combination.rb +0 -23
  24. data/examples/complex/RC-lpf.rb +0 -47
  25. data/examples/complex/add.rb +0 -36
  26. data/examples/complex/coerce.rb +0 -14
  27. data/examples/complex/complex.rb +0 -25
  28. data/examples/complex/fpmi.rb +0 -70
  29. data/examples/complex/functions.rb +0 -77
  30. data/examples/complex/michelson.rb +0 -36
  31. data/examples/complex/mul.rb +0 -28
  32. data/examples/complex/oscillator.rb +0 -17
  33. data/examples/complex/set.rb +0 -37
  34. data/examples/const/physconst.rb +0 -151
  35. data/examples/const/travel.rb +0 -45
  36. data/examples/deriv/demo.rb +0 -13
  37. data/examples/deriv/deriv.rb +0 -36
  38. data/examples/deriv/diff.rb +0 -35
  39. data/examples/dht.rb +0 -42
  40. data/examples/dirac.rb +0 -56
  41. data/examples/eigen/eigen.rb +0 -34
  42. data/examples/eigen/herm.rb +0 -22
  43. data/examples/eigen/narray.rb +0 -9
  44. data/examples/eigen/nonsymm.rb +0 -37
  45. data/examples/eigen/nonsymmv.rb +0 -43
  46. data/examples/eigen/qhoscillator.gp +0 -35
  47. data/examples/eigen/qhoscillator.rb +0 -90
  48. data/examples/eigen/vander.rb +0 -41
  49. data/examples/fft/fft.rb +0 -17
  50. data/examples/fft/fft2.rb +0 -17
  51. data/examples/fft/forward.rb +0 -25
  52. data/examples/fft/forward2.rb +0 -26
  53. data/examples/fft/radix2.rb +0 -18
  54. data/examples/fft/real-halfcomplex.rb +0 -33
  55. data/examples/fft/real-halfcomplex2.rb +0 -30
  56. data/examples/fft/realradix2.rb +0 -19
  57. data/examples/fft/sunspot.dat +0 -256
  58. data/examples/fft/sunspot.rb +0 -16
  59. data/examples/fit/expdata.dat +0 -20
  60. data/examples/fit/expfit.rb +0 -31
  61. data/examples/fit/gaussfit.rb +0 -29
  62. data/examples/fit/gaussian_2peaks.rb +0 -34
  63. data/examples/fit/hillfit.rb +0 -40
  64. data/examples/fit/lognormal.rb +0 -26
  65. data/examples/fit/lorentzfit.rb +0 -22
  66. data/examples/fit/multifit.rb +0 -72
  67. data/examples/fit/ndlinear.rb +0 -133
  68. data/examples/fit/nonlinearfit.rb +0 -89
  69. data/examples/fit/plot.gp +0 -36
  70. data/examples/fit/polyfit.rb +0 -9
  71. data/examples/fit/powerfit.rb +0 -21
  72. data/examples/fit/sigmoidfit.rb +0 -40
  73. data/examples/fit/sinfit.rb +0 -22
  74. data/examples/fit/wlinear.rb +0 -46
  75. data/examples/fresnel.rb +0 -11
  76. data/examples/function/function.rb +0 -36
  77. data/examples/function/log.rb +0 -7
  78. data/examples/function/min.rb +0 -33
  79. data/examples/function/sin.rb +0 -10
  80. data/examples/function/synchrotron.rb +0 -18
  81. data/examples/gallery/butterfly.rb +0 -7
  82. data/examples/gallery/cayley.rb +0 -12
  83. data/examples/gallery/cornu.rb +0 -23
  84. data/examples/gallery/eight.rb +0 -11
  85. data/examples/gallery/koch.rb +0 -40
  86. data/examples/gallery/lemniscate.rb +0 -11
  87. data/examples/gallery/polar.rb +0 -11
  88. data/examples/gallery/rgplot/cossin.rb +0 -35
  89. data/examples/gallery/rgplot/rgplot.replaced +0 -0
  90. data/examples/gallery/rgplot/roesller.rb +0 -55
  91. data/examples/gallery/roesller.rb +0 -39
  92. data/examples/gallery/scarabaeus.rb +0 -14
  93. data/examples/histogram/cauchy.rb +0 -27
  94. data/examples/histogram/cauchy.sh +0 -2
  95. data/examples/histogram/exponential.rb +0 -19
  96. data/examples/histogram/gauss.rb +0 -16
  97. data/examples/histogram/gsl-histogram.rb +0 -40
  98. data/examples/histogram/histo2d.rb +0 -31
  99. data/examples/histogram/histo3d.rb +0 -34
  100. data/examples/histogram/histogram-pdf.rb +0 -27
  101. data/examples/histogram/histogram.rb +0 -26
  102. data/examples/histogram/integral.rb +0 -28
  103. data/examples/histogram/poisson.rb +0 -27
  104. data/examples/histogram/power.rb +0 -25
  105. data/examples/histogram/rebin.rb +0 -17
  106. data/examples/histogram/smp.dat +0 -5
  107. data/examples/histogram/xexp.rb +0 -21
  108. data/examples/integration/ahmed.rb +0 -21
  109. data/examples/integration/cosmology.rb +0 -75
  110. data/examples/integration/friedmann.gp +0 -16
  111. data/examples/integration/friedmann.rb +0 -35
  112. data/examples/integration/gamma-zeta.rb +0 -35
  113. data/examples/integration/integration.rb +0 -22
  114. data/examples/integration/qag.rb +0 -8
  115. data/examples/integration/qag2.rb +0 -14
  116. data/examples/integration/qag3.rb +0 -8
  117. data/examples/integration/qagi.rb +0 -28
  118. data/examples/integration/qagi2.rb +0 -49
  119. data/examples/integration/qagiu.rb +0 -29
  120. data/examples/integration/qagp.rb +0 -20
  121. data/examples/integration/qags.rb +0 -14
  122. data/examples/integration/qawc.rb +0 -18
  123. data/examples/integration/qawf.rb +0 -41
  124. data/examples/integration/qawo.rb +0 -29
  125. data/examples/integration/qaws.rb +0 -30
  126. data/examples/integration/qng.rb +0 -17
  127. data/examples/interp/demo.gp +0 -20
  128. data/examples/interp/demo.rb +0 -45
  129. data/examples/interp/interp.rb +0 -37
  130. data/examples/interp/points +0 -10
  131. data/examples/interp/spline.rb +0 -20
  132. data/examples/jacobi/deriv.rb +0 -40
  133. data/examples/jacobi/integrate.rb +0 -34
  134. data/examples/jacobi/interp.rb +0 -43
  135. data/examples/jacobi/jacobi.rb +0 -11
  136. data/examples/linalg/HH.rb +0 -15
  137. data/examples/linalg/HH_narray.rb +0 -13
  138. data/examples/linalg/LQ_solve.rb +0 -73
  139. data/examples/linalg/LU.rb +0 -84
  140. data/examples/linalg/LU2.rb +0 -31
  141. data/examples/linalg/LU_narray.rb +0 -24
  142. data/examples/linalg/PTLQ.rb +0 -47
  143. data/examples/linalg/QR.rb +0 -18
  144. data/examples/linalg/QRPT.rb +0 -47
  145. data/examples/linalg/QR_solve.rb +0 -78
  146. data/examples/linalg/QR_solve_narray.rb +0 -13
  147. data/examples/linalg/SV.rb +0 -16
  148. data/examples/linalg/SV_narray.rb +0 -12
  149. data/examples/linalg/SV_solve.rb +0 -49
  150. data/examples/linalg/chol.rb +0 -29
  151. data/examples/linalg/chol_narray.rb +0 -15
  152. data/examples/linalg/complex.rb +0 -57
  153. data/examples/linalg/invert_narray.rb +0 -10
  154. data/examples/math/const.rb +0 -67
  155. data/examples/math/elementary.rb +0 -35
  156. data/examples/math/functions.rb +0 -41
  157. data/examples/math/inf_nan.rb +0 -34
  158. data/examples/math/minmax.rb +0 -22
  159. data/examples/math/power.rb +0 -18
  160. data/examples/math/test.rb +0 -31
  161. data/examples/matrix/a.dat +0 -0
  162. data/examples/matrix/add.rb +0 -45
  163. data/examples/matrix/b.dat +0 -4
  164. data/examples/matrix/cat.rb +0 -31
  165. data/examples/matrix/colvectors.rb +0 -24
  166. data/examples/matrix/complex.rb +0 -41
  167. data/examples/matrix/det.rb +0 -29
  168. data/examples/matrix/diagonal.rb +0 -23
  169. data/examples/matrix/get_all.rb +0 -159
  170. data/examples/matrix/hilbert.rb +0 -31
  171. data/examples/matrix/iterator.rb +0 -19
  172. data/examples/matrix/matrix.rb +0 -57
  173. data/examples/matrix/minmax.rb +0 -53
  174. data/examples/matrix/mul.rb +0 -39
  175. data/examples/matrix/rand.rb +0 -20
  176. data/examples/matrix/read.rb +0 -29
  177. data/examples/matrix/rowcol.rb +0 -47
  178. data/examples/matrix/set.rb +0 -41
  179. data/examples/matrix/set_all.rb +0 -100
  180. data/examples/matrix/view.rb +0 -32
  181. data/examples/matrix/view_all.rb +0 -148
  182. data/examples/matrix/write.rb +0 -23
  183. data/examples/min.rb +0 -29
  184. data/examples/monte/miser.rb +0 -47
  185. data/examples/monte/monte.rb +0 -47
  186. data/examples/monte/plain.rb +0 -47
  187. data/examples/monte/vegas.rb +0 -46
  188. data/examples/multimin/bundle.rb +0 -66
  189. data/examples/multimin/cqp.rb +0 -109
  190. data/examples/multimin/fdfminimizer.rb +0 -40
  191. data/examples/multimin/fminimizer.rb +0 -41
  192. data/examples/multiroot/demo.rb +0 -36
  193. data/examples/multiroot/fdfsolver.rb +0 -50
  194. data/examples/multiroot/fsolver.rb +0 -33
  195. data/examples/multiroot/fsolver2.rb +0 -32
  196. data/examples/multiroot/fsolver3.rb +0 -26
  197. data/examples/narray/histogram.rb +0 -14
  198. data/examples/narray/mandel.rb +0 -27
  199. data/examples/narray/narray.rb +0 -28
  200. data/examples/narray/narray2.rb +0 -44
  201. data/examples/narray/sf.rb +0 -26
  202. data/examples/ntuple/create.rb +0 -17
  203. data/examples/ntuple/project.rb +0 -31
  204. data/examples/odeiv/binarysystem.gp +0 -23
  205. data/examples/odeiv/binarysystem.rb +0 -104
  206. data/examples/odeiv/demo.gp +0 -24
  207. data/examples/odeiv/demo.rb +0 -69
  208. data/examples/odeiv/demo2.gp +0 -26
  209. data/examples/odeiv/duffing.rb +0 -45
  210. data/examples/odeiv/frei1.rb +0 -109
  211. data/examples/odeiv/frei2.rb +0 -76
  212. data/examples/odeiv/legendre.rb +0 -52
  213. data/examples/odeiv/odeiv.rb +0 -32
  214. data/examples/odeiv/odeiv2.rb +0 -45
  215. data/examples/odeiv/oscillator.rb +0 -42
  216. data/examples/odeiv/sedov.rb +0 -97
  217. data/examples/odeiv/whitedwarf.gp +0 -40
  218. data/examples/odeiv/whitedwarf.rb +0 -158
  219. data/examples/ool/conmin.rb +0 -100
  220. data/examples/ool/gencan.rb +0 -99
  221. data/examples/ool/pgrad.rb +0 -100
  222. data/examples/ool/spg.rb +0 -100
  223. data/examples/pdf/bernoulli.rb +0 -5
  224. data/examples/pdf/beta.rb +0 -7
  225. data/examples/pdf/binomiral.rb +0 -10
  226. data/examples/pdf/cauchy.rb +0 -6
  227. data/examples/pdf/chisq.rb +0 -8
  228. data/examples/pdf/exponential.rb +0 -7
  229. data/examples/pdf/exppow.rb +0 -6
  230. data/examples/pdf/fdist.rb +0 -7
  231. data/examples/pdf/flat.rb +0 -7
  232. data/examples/pdf/gamma.rb +0 -8
  233. data/examples/pdf/gauss-tail.rb +0 -5
  234. data/examples/pdf/gauss.rb +0 -6
  235. data/examples/pdf/geometric.rb +0 -5
  236. data/examples/pdf/gumbel.rb +0 -6
  237. data/examples/pdf/hypergeometric.rb +0 -11
  238. data/examples/pdf/landau.rb +0 -5
  239. data/examples/pdf/laplace.rb +0 -7
  240. data/examples/pdf/logarithmic.rb +0 -5
  241. data/examples/pdf/logistic.rb +0 -6
  242. data/examples/pdf/lognormal.rb +0 -6
  243. data/examples/pdf/neg-binomiral.rb +0 -10
  244. data/examples/pdf/pareto.rb +0 -7
  245. data/examples/pdf/pascal.rb +0 -10
  246. data/examples/pdf/poisson.rb +0 -5
  247. data/examples/pdf/rayleigh-tail.rb +0 -6
  248. data/examples/pdf/rayleigh.rb +0 -6
  249. data/examples/pdf/tdist.rb +0 -6
  250. data/examples/pdf/weibull.rb +0 -8
  251. data/examples/permutation/ex1.rb +0 -22
  252. data/examples/permutation/permutation.rb +0 -16
  253. data/examples/poly/bell.rb +0 -6
  254. data/examples/poly/bessel.rb +0 -6
  255. data/examples/poly/cheb.rb +0 -6
  256. data/examples/poly/cheb_II.rb +0 -6
  257. data/examples/poly/cubic.rb +0 -9
  258. data/examples/poly/demo.rb +0 -20
  259. data/examples/poly/eval.rb +0 -28
  260. data/examples/poly/eval_derivs.rb +0 -14
  261. data/examples/poly/fit.rb +0 -21
  262. data/examples/poly/hermite.rb +0 -6
  263. data/examples/poly/poly.rb +0 -13
  264. data/examples/poly/quadratic.rb +0 -25
  265. data/examples/random/diffusion.rb +0 -34
  266. data/examples/random/gaussian.rb +0 -9
  267. data/examples/random/generator.rb +0 -27
  268. data/examples/random/hdsobol.rb +0 -21
  269. data/examples/random/poisson.rb +0 -9
  270. data/examples/random/qrng.rb +0 -19
  271. data/examples/random/randomwalk.rb +0 -37
  272. data/examples/random/randomwalk2d.rb +0 -19
  273. data/examples/random/rayleigh.rb +0 -36
  274. data/examples/random/rng.rb +0 -33
  275. data/examples/random/rngextra.rb +0 -14
  276. data/examples/roots/bisection.rb +0 -25
  277. data/examples/roots/brent.rb +0 -43
  278. data/examples/roots/demo.rb +0 -30
  279. data/examples/roots/newton.rb +0 -46
  280. data/examples/roots/recombination.gp +0 -11
  281. data/examples/roots/recombination.rb +0 -61
  282. data/examples/roots/steffenson.rb +0 -48
  283. data/examples/sf/ShiChi.rb +0 -6
  284. data/examples/sf/SiCi.rb +0 -6
  285. data/examples/sf/airy_Ai.rb +0 -8
  286. data/examples/sf/airy_Bi.rb +0 -8
  287. data/examples/sf/bessel_IK.rb +0 -12
  288. data/examples/sf/bessel_JY.rb +0 -13
  289. data/examples/sf/beta_inc.rb +0 -9
  290. data/examples/sf/clausen.rb +0 -6
  291. data/examples/sf/dawson.rb +0 -5
  292. data/examples/sf/debye.rb +0 -9
  293. data/examples/sf/dilog.rb +0 -6
  294. data/examples/sf/ellint.rb +0 -6
  295. data/examples/sf/expint.rb +0 -8
  296. data/examples/sf/fermi.rb +0 -10
  297. data/examples/sf/gamma_inc_P.rb +0 -9
  298. data/examples/sf/gegenbauer.rb +0 -8
  299. data/examples/sf/hyperg.rb +0 -7
  300. data/examples/sf/laguerre.rb +0 -19
  301. data/examples/sf/lambertW.rb +0 -5
  302. data/examples/sf/legendre_P.rb +0 -10
  303. data/examples/sf/lngamma.rb +0 -5
  304. data/examples/sf/psi.rb +0 -54
  305. data/examples/sf/sphbessel.gp +0 -27
  306. data/examples/sf/sphbessel.rb +0 -30
  307. data/examples/sf/synchrotron.rb +0 -5
  308. data/examples/sf/transport.rb +0 -10
  309. data/examples/sf/zetam1.rb +0 -5
  310. data/examples/siman.rb +0 -44
  311. data/examples/sort/heapsort.rb +0 -23
  312. data/examples/sort/heapsort_vector_complex.rb +0 -21
  313. data/examples/sort/sort.rb +0 -23
  314. data/examples/sort/sort2.rb +0 -16
  315. data/examples/stats/mean.rb +0 -17
  316. data/examples/stats/statistics.rb +0 -18
  317. data/examples/stats/test.rb +0 -9
  318. data/examples/sum.rb +0 -34
  319. data/examples/tamu_anova.rb +0 -18
  320. data/examples/vector/a.dat +0 -0
  321. data/examples/vector/add.rb +0 -56
  322. data/examples/vector/b.dat +0 -4
  323. data/examples/vector/c.dat +0 -3
  324. data/examples/vector/collect.rb +0 -26
  325. data/examples/vector/compare.rb +0 -28
  326. data/examples/vector/complex.rb +0 -51
  327. data/examples/vector/complex_get_all.rb +0 -85
  328. data/examples/vector/complex_set_all.rb +0 -131
  329. data/examples/vector/complex_view_all.rb +0 -77
  330. data/examples/vector/connect.rb +0 -22
  331. data/examples/vector/decimate.rb +0 -38
  332. data/examples/vector/diff.rb +0 -31
  333. data/examples/vector/filescan.rb +0 -17
  334. data/examples/vector/floor.rb +0 -23
  335. data/examples/vector/get_all.rb +0 -82
  336. data/examples/vector/gnuplot.rb +0 -38
  337. data/examples/vector/graph.rb +0 -28
  338. data/examples/vector/histogram.rb +0 -22
  339. data/examples/vector/linspace.rb +0 -24
  340. data/examples/vector/log.rb +0 -17
  341. data/examples/vector/logic.rb +0 -33
  342. data/examples/vector/logspace.rb +0 -25
  343. data/examples/vector/minmax.rb +0 -47
  344. data/examples/vector/mul.rb +0 -49
  345. data/examples/vector/narray.rb +0 -46
  346. data/examples/vector/read.rb +0 -29
  347. data/examples/vector/set.rb +0 -35
  348. data/examples/vector/set_all.rb +0 -121
  349. data/examples/vector/smpv.dat +0 -15
  350. data/examples/vector/test.rb +0 -43
  351. data/examples/vector/test_gslblock.rb +0 -58
  352. data/examples/vector/vector.rb +0 -110
  353. data/examples/vector/view.rb +0 -35
  354. data/examples/vector/view_all.rb +0 -73
  355. data/examples/vector/where.rb +0 -29
  356. data/examples/vector/write.rb +0 -24
  357. data/examples/vector/zip.rb +0 -34
  358. data/examples/wavelet/ecg.dat +0 -256
  359. data/examples/wavelet/wavelet1.rb +0 -50
  360. data/ext/gsl_native/alf.c +0 -206
  361. data/ext/gsl_native/array.c +0 -553
  362. data/ext/gsl_native/array_complex.c +0 -245
  363. data/ext/gsl_native/blas.c +0 -28
  364. data/ext/gsl_native/blas1.c +0 -733
  365. data/ext/gsl_native/blas2.c +0 -1088
  366. data/ext/gsl_native/blas3.c +0 -880
  367. data/ext/gsl_native/block.c +0 -40
  368. data/ext/gsl_native/block_source.h +0 -885
  369. data/ext/gsl_native/bspline.c +0 -122
  370. data/ext/gsl_native/bundle.c +0 -3
  371. data/ext/gsl_native/cdf.c +0 -740
  372. data/ext/gsl_native/cheb.c +0 -531
  373. data/ext/gsl_native/combination.c +0 -275
  374. data/ext/gsl_native/common.c +0 -293
  375. data/ext/gsl_native/complex.c +0 -1002
  376. data/ext/gsl_native/const.c +0 -331
  377. data/ext/gsl_native/const_additional.c +0 -99
  378. data/ext/gsl_native/cqp.c +0 -283
  379. data/ext/gsl_native/deriv.c +0 -187
  380. data/ext/gsl_native/dht.c +0 -353
  381. data/ext/gsl_native/diff.c +0 -164
  382. data/ext/gsl_native/dirac.c +0 -388
  383. data/ext/gsl_native/eigen.c +0 -2322
  384. data/ext/gsl_native/error.c +0 -193
  385. data/ext/gsl_native/extconf.rb +0 -118
  386. data/ext/gsl_native/fft.c +0 -1095
  387. data/ext/gsl_native/fit.c +0 -204
  388. data/ext/gsl_native/fresnel.c +0 -312
  389. data/ext/gsl_native/function.c +0 -518
  390. data/ext/gsl_native/geometry.c +0 -139
  391. data/ext/gsl_native/graph.c +0 -1590
  392. data/ext/gsl_native/gsl.c +0 -259
  393. data/ext/gsl_native/gsl_narray.c +0 -794
  394. data/ext/gsl_native/histogram.c +0 -1964
  395. data/ext/gsl_native/histogram2d.c +0 -1042
  396. data/ext/gsl_native/histogram3d.c +0 -884
  397. data/ext/gsl_native/histogram3d_source.c +0 -749
  398. data/ext/gsl_native/histogram_find.c +0 -99
  399. data/ext/gsl_native/histogram_oper.c +0 -150
  400. data/ext/gsl_native/ieee.c +0 -88
  401. data/ext/gsl_native/include/rb_gsl.h +0 -136
  402. data/ext/gsl_native/include/rb_gsl_array.h +0 -214
  403. data/ext/gsl_native/include/rb_gsl_cheb.h +0 -19
  404. data/ext/gsl_native/include/rb_gsl_common.h +0 -348
  405. data/ext/gsl_native/include/rb_gsl_complex.h +0 -25
  406. data/ext/gsl_native/include/rb_gsl_const.h +0 -23
  407. data/ext/gsl_native/include/rb_gsl_dirac.h +0 -6
  408. data/ext/gsl_native/include/rb_gsl_eigen.h +0 -17
  409. data/ext/gsl_native/include/rb_gsl_fft.h +0 -49
  410. data/ext/gsl_native/include/rb_gsl_fit.h +0 -23
  411. data/ext/gsl_native/include/rb_gsl_function.h +0 -23
  412. data/ext/gsl_native/include/rb_gsl_graph.h +0 -68
  413. data/ext/gsl_native/include/rb_gsl_histogram.h +0 -63
  414. data/ext/gsl_native/include/rb_gsl_histogram3d.h +0 -97
  415. data/ext/gsl_native/include/rb_gsl_integration.h +0 -17
  416. data/ext/gsl_native/include/rb_gsl_interp.h +0 -41
  417. data/ext/gsl_native/include/rb_gsl_linalg.h +0 -21
  418. data/ext/gsl_native/include/rb_gsl_math.h +0 -20
  419. data/ext/gsl_native/include/rb_gsl_odeiv.h +0 -18
  420. data/ext/gsl_native/include/rb_gsl_poly.h +0 -67
  421. data/ext/gsl_native/include/rb_gsl_rational.h +0 -30
  422. data/ext/gsl_native/include/rb_gsl_rng.h +0 -20
  423. data/ext/gsl_native/include/rb_gsl_root.h +0 -22
  424. data/ext/gsl_native/include/rb_gsl_sf.h +0 -110
  425. data/ext/gsl_native/include/rb_gsl_statistics.h +0 -17
  426. data/ext/gsl_native/include/rb_gsl_tensor.h +0 -43
  427. data/ext/gsl_native/include/rb_gsl_with_narray.h +0 -31
  428. data/ext/gsl_native/include/templates_off.h +0 -87
  429. data/ext/gsl_native/include/templates_on.h +0 -241
  430. data/ext/gsl_native/integration.c +0 -1154
  431. data/ext/gsl_native/interp.c +0 -499
  432. data/ext/gsl_native/jacobi.c +0 -733
  433. data/ext/gsl_native/linalg.c +0 -3915
  434. data/ext/gsl_native/linalg_complex.c +0 -726
  435. data/ext/gsl_native/math.c +0 -706
  436. data/ext/gsl_native/matrix.c +0 -36
  437. data/ext/gsl_native/matrix_complex.c +0 -1733
  438. data/ext/gsl_native/matrix_double.c +0 -557
  439. data/ext/gsl_native/matrix_int.c +0 -255
  440. data/ext/gsl_native/matrix_source.h +0 -2708
  441. data/ext/gsl_native/min.c +0 -219
  442. data/ext/gsl_native/monte.c +0 -978
  443. data/ext/gsl_native/multifit.c +0 -1862
  444. data/ext/gsl_native/multimin.c +0 -778
  445. data/ext/gsl_native/multimin_fsdf.c +0 -156
  446. data/ext/gsl_native/multiroots.c +0 -952
  447. data/ext/gsl_native/multiset.c +0 -210
  448. data/ext/gsl_native/ndlinear.c +0 -320
  449. data/ext/gsl_native/nmf.c +0 -171
  450. data/ext/gsl_native/nmf_wrap.c +0 -75
  451. data/ext/gsl_native/ntuple.c +0 -469
  452. data/ext/gsl_native/odeiv.c +0 -947
  453. data/ext/gsl_native/ool.c +0 -879
  454. data/ext/gsl_native/permutation.c +0 -598
  455. data/ext/gsl_native/poly.c +0 -39
  456. data/ext/gsl_native/poly2.c +0 -265
  457. data/ext/gsl_native/poly_source.h +0 -1871
  458. data/ext/gsl_native/qrng.c +0 -160
  459. data/ext/gsl_native/randist.c +0 -1848
  460. data/ext/gsl_native/rational.c +0 -480
  461. data/ext/gsl_native/rng.c +0 -595
  462. data/ext/gsl_native/root.c +0 -407
  463. data/ext/gsl_native/sf.c +0 -1446
  464. data/ext/gsl_native/sf_airy.c +0 -200
  465. data/ext/gsl_native/sf_bessel.c +0 -871
  466. data/ext/gsl_native/sf_clausen.c +0 -28
  467. data/ext/gsl_native/sf_coulomb.c +0 -206
  468. data/ext/gsl_native/sf_coupling.c +0 -121
  469. data/ext/gsl_native/sf_dawson.c +0 -29
  470. data/ext/gsl_native/sf_debye.c +0 -148
  471. data/ext/gsl_native/sf_dilog.c +0 -43
  472. data/ext/gsl_native/sf_elementary.c +0 -46
  473. data/ext/gsl_native/sf_ellint.c +0 -206
  474. data/ext/gsl_native/sf_elljac.c +0 -30
  475. data/ext/gsl_native/sf_erfc.c +0 -89
  476. data/ext/gsl_native/sf_exp.c +0 -169
  477. data/ext/gsl_native/sf_expint.c +0 -201
  478. data/ext/gsl_native/sf_fermi_dirac.c +0 -148
  479. data/ext/gsl_native/sf_gamma.c +0 -343
  480. data/ext/gsl_native/sf_gegenbauer.c +0 -97
  481. data/ext/gsl_native/sf_hyperg.c +0 -203
  482. data/ext/gsl_native/sf_laguerre.c +0 -113
  483. data/ext/gsl_native/sf_lambert.c +0 -47
  484. data/ext/gsl_native/sf_legendre.c +0 -368
  485. data/ext/gsl_native/sf_log.c +0 -105
  486. data/ext/gsl_native/sf_mathieu.c +0 -235
  487. data/ext/gsl_native/sf_power.c +0 -47
  488. data/ext/gsl_native/sf_psi.c +0 -89
  489. data/ext/gsl_native/sf_synchrotron.c +0 -48
  490. data/ext/gsl_native/sf_transport.c +0 -76
  491. data/ext/gsl_native/sf_trigonometric.c +0 -210
  492. data/ext/gsl_native/sf_zeta.c +0 -115
  493. data/ext/gsl_native/signal.c +0 -303
  494. data/ext/gsl_native/siman.c +0 -713
  495. data/ext/gsl_native/sort.c +0 -207
  496. data/ext/gsl_native/spline.c +0 -377
  497. data/ext/gsl_native/stats.c +0 -787
  498. data/ext/gsl_native/sum.c +0 -168
  499. data/ext/gsl_native/tamu_anova.c +0 -56
  500. data/ext/gsl_native/tensor.c +0 -35
  501. data/ext/gsl_native/tensor_source.h +0 -1122
  502. data/ext/gsl_native/vector.c +0 -35
  503. data/ext/gsl_native/vector_complex.c +0 -2241
  504. data/ext/gsl_native/vector_double.c +0 -1433
  505. data/ext/gsl_native/vector_int.c +0 -202
  506. data/ext/gsl_native/vector_source.h +0 -3321
  507. data/ext/gsl_native/wavelet.c +0 -923
  508. data/lib/gsl.rb +0 -8
  509. data/lib/gsl/gnuplot.rb +0 -41
  510. data/lib/gsl/oper.rb +0 -43
  511. data/lib/gsl/version.rb +0 -3
  512. data/lib/ool.rb +0 -22
  513. data/lib/ool/conmin.rb +0 -30
  514. data/lib/rbgsl.rb +0 -1
  515. data/rdoc/alf.rdoc +0 -77
  516. data/rdoc/blas.rdoc +0 -269
  517. data/rdoc/bspline.rdoc +0 -42
  518. data/rdoc/changes.rdoc +0 -159
  519. data/rdoc/cheb.rdoc +0 -99
  520. data/rdoc/cholesky_complex.rdoc +0 -46
  521. data/rdoc/combi.rdoc +0 -125
  522. data/rdoc/complex.rdoc +0 -210
  523. data/rdoc/const.rdoc +0 -546
  524. data/rdoc/dht.rdoc +0 -122
  525. data/rdoc/diff.rdoc +0 -133
  526. data/rdoc/ehandling.rdoc +0 -50
  527. data/rdoc/eigen.rdoc +0 -401
  528. data/rdoc/fft.rdoc +0 -535
  529. data/rdoc/fit.rdoc +0 -284
  530. data/rdoc/function.rdoc +0 -94
  531. data/rdoc/graph.rdoc +0 -137
  532. data/rdoc/hist.rdoc +0 -409
  533. data/rdoc/hist2d.rdoc +0 -279
  534. data/rdoc/hist3d.rdoc +0 -112
  535. data/rdoc/integration.rdoc +0 -398
  536. data/rdoc/interp.rdoc +0 -231
  537. data/rdoc/intro.rdoc +0 -27
  538. data/rdoc/linalg.rdoc +0 -681
  539. data/rdoc/linalg_complex.rdoc +0 -88
  540. data/rdoc/math.rdoc +0 -276
  541. data/rdoc/matrix.rdoc +0 -1093
  542. data/rdoc/min.rdoc +0 -189
  543. data/rdoc/monte.rdoc +0 -234
  544. data/rdoc/multimin.rdoc +0 -312
  545. data/rdoc/multiroot.rdoc +0 -293
  546. data/rdoc/narray.rdoc +0 -177
  547. data/rdoc/ndlinear.rdoc +0 -250
  548. data/rdoc/nonlinearfit.rdoc +0 -348
  549. data/rdoc/ntuple.rdoc +0 -88
  550. data/rdoc/odeiv.rdoc +0 -378
  551. data/rdoc/perm.rdoc +0 -221
  552. data/rdoc/poly.rdoc +0 -335
  553. data/rdoc/qrng.rdoc +0 -90
  554. data/rdoc/randist.rdoc +0 -233
  555. data/rdoc/ref.rdoc +0 -93
  556. data/rdoc/rng.rdoc +0 -203
  557. data/rdoc/roots.rdoc +0 -305
  558. data/rdoc/sf.rdoc +0 -1622
  559. data/rdoc/siman.rdoc +0 -89
  560. data/rdoc/sort.rdoc +0 -94
  561. data/rdoc/start.rdoc +0 -16
  562. data/rdoc/stats.rdoc +0 -219
  563. data/rdoc/sum.rdoc +0 -65
  564. data/rdoc/tensor.rdoc +0 -251
  565. data/rdoc/tut.rdoc +0 -5
  566. data/rdoc/use.rdoc +0 -177
  567. data/rdoc/vector.rdoc +0 -1243
  568. data/rdoc/vector_complex.rdoc +0 -347
  569. data/rdoc/wavelet.rdoc +0 -218
  570. data/test/gsl/blas_test.rb +0 -79
  571. data/test/gsl/bspline_test.rb +0 -63
  572. data/test/gsl/cdf_test.rb +0 -1512
  573. data/test/gsl/cheb_test.rb +0 -80
  574. data/test/gsl/combination_test.rb +0 -100
  575. data/test/gsl/complex_test.rb +0 -20
  576. data/test/gsl/const_test.rb +0 -29
  577. data/test/gsl/deriv_test.rb +0 -62
  578. data/test/gsl/dht_test.rb +0 -79
  579. data/test/gsl/diff_test.rb +0 -53
  580. data/test/gsl/eigen_test.rb +0 -563
  581. data/test/gsl/err_test.rb +0 -23
  582. data/test/gsl/fit_test.rb +0 -101
  583. data/test/gsl/histo_test.rb +0 -14
  584. data/test/gsl/index_test.rb +0 -61
  585. data/test/gsl/integration_test.rb +0 -274
  586. data/test/gsl/interp_test.rb +0 -27
  587. data/test/gsl/linalg_test.rb +0 -463
  588. data/test/gsl/matrix_nmf_test.rb +0 -37
  589. data/test/gsl/matrix_test.rb +0 -98
  590. data/test/gsl/min_test.rb +0 -89
  591. data/test/gsl/monte_test.rb +0 -77
  592. data/test/gsl/multifit_test.rb +0 -753
  593. data/test/gsl/multimin_test.rb +0 -157
  594. data/test/gsl/multiroot_test.rb +0 -135
  595. data/test/gsl/multiset_test.rb +0 -52
  596. data/test/gsl/odeiv_test.rb +0 -275
  597. data/test/gsl/oper_test.rb +0 -98
  598. data/test/gsl/poly_test.rb +0 -338
  599. data/test/gsl/qrng_test.rb +0 -94
  600. data/test/gsl/quartic_test.rb +0 -28
  601. data/test/gsl/randist_test.rb +0 -122
  602. data/test/gsl/rng_test.rb +0 -303
  603. data/test/gsl/roots_test.rb +0 -78
  604. data/test/gsl/sf_test.rb +0 -2079
  605. data/test/gsl/stats_test.rb +0 -122
  606. data/test/gsl/sum_test.rb +0 -69
  607. data/test/gsl/tensor_test.rb +0 -396
  608. data/test/gsl/vector_test.rb +0 -223
  609. data/test/gsl/wavelet_test.rb +0 -130
  610. data/test/gsl_test.rb +0 -321
  611. data/test/test_helper.rb +0 -42
  612. data/uncrustify.cfg +0 -1693
@@ -1,1862 +0,0 @@
1
- /*
2
- multifit.c
3
- Ruby/GSL: Ruby extension library for GSL (GNU Scientific Library)
4
- (C) Copyright 2004 by Yoshiki Tsunesada
5
-
6
- Ruby/GSL is free software: you can redistribute it and/or modify it
7
- under the terms of the GNU General Public License.
8
- This library is distributed in the hope that it will be useful, but
9
- WITHOUT ANY WARRANTY.
10
- */
11
-
12
- #include "include/rb_gsl_fit.h"
13
- #include "include/rb_gsl_function.h"
14
- #include "include/rb_gsl_common.h"
15
-
16
- #ifdef HAVE_NDLINEAR_GSL_MULTIFIT_NDLINEAR_H
17
- #include <ndlinear/gsl_multifit_ndlinear.h>
18
- void Init_ndlinear(VALUE module);
19
- #endif
20
-
21
- #ifndef CHECK_WORKSPACE
22
- #define CHECK_WORKSPACE(x) if(CLASS_OF(x)!=cgsl_multifit_workspace) \
23
- rb_raise(rb_eTypeError, \
24
- "wrong argument type %s (GSL::MultiFit::Workspace expected)", \
25
- rb_class2name(CLASS_OF(x)));
26
- #endif
27
-
28
- #ifndef CHECK_MULTIFIT_FUNCTION_FDF
29
- #define CHECK_MULTIFIT_FUNCTION_FDF(x) if(CLASS_OF(x)!=cgsl_multifit_function_fdf) \
30
- rb_raise(rb_eTypeError, \
31
- "wrong argument type %s (GSL::MultiFit::Workspace expected)", \
32
- rb_class2name(CLASS_OF(x)));
33
- #endif
34
-
35
- static VALUE cgsl_multifit_workspace;
36
- static VALUE cgsl_multifit_function_fdf;
37
-
38
- enum MultiFit_Solver_Type {
39
- GSL_MULTIFIT_FDFSOLVER_LMSDER,
40
- GSL_MULTIFIT_FDFSOLVER_LMDER,
41
- };
42
-
43
- static VALUE rb_gsl_multifit_workspace_new(VALUE klass, VALUE n, VALUE p)
44
- {
45
- gsl_multifit_linear_workspace *w = NULL;
46
- CHECK_FIXNUM(n); CHECK_FIXNUM(p);
47
- w = gsl_multifit_linear_alloc(FIX2INT(n), FIX2INT(p));
48
- return Data_Wrap_Struct(cgsl_multifit_workspace, 0, gsl_multifit_linear_free, w);
49
- }
50
-
51
- static VALUE rb_gsl_multifit_linear(int argc, VALUE *argv, VALUE obj)
52
- {
53
- gsl_multifit_linear_workspace *space = NULL;
54
- gsl_matrix *x = NULL, *cov = NULL;
55
- gsl_vector *y = NULL, *c = NULL;
56
- double chisq;
57
- int status, flag = 0;
58
- VALUE vc, vcov;
59
- if (argc != 2 && argc != 3)
60
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 2 or 3)", argc);
61
- Data_Get_Matrix(argv[0], x);
62
- Data_Get_Vector(argv[1], y);
63
- if (argc == 3) {
64
- CHECK_WORKSPACE(argv[2]);
65
- Data_Get_Struct(argv[2], gsl_multifit_linear_workspace, space);
66
- } else {
67
- space = gsl_multifit_linear_alloc(x->size1, x->size2);
68
- flag = 1;
69
- }
70
- cov = gsl_matrix_alloc(x->size2, x->size2);
71
- c = gsl_vector_alloc(x->size2);
72
- status = gsl_multifit_linear(x, y, c, cov, &chisq, space);
73
- if (flag == 1) gsl_multifit_linear_free(space);
74
- vc = Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, c);
75
- vcov = Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, cov);
76
- return rb_ary_new3(4, vc, vcov, rb_float_new(chisq), INT2FIX(status));
77
- }
78
-
79
- static VALUE rb_gsl_multifit_wlinear(int argc, VALUE *argv, VALUE obj)
80
- {
81
- gsl_multifit_linear_workspace *space = NULL;
82
- gsl_matrix *x = NULL, *cov = NULL;
83
- gsl_vector *w = NULL, *y = NULL, *c = NULL;
84
- double chisq;
85
- int status, flag = 0;
86
- VALUE vc, vcov;
87
- if (argc != 3 && argc != 4)
88
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 3 or 4)", argc);
89
- Data_Get_Matrix(argv[0], x);
90
- Data_Get_Vector(argv[1], w);
91
- Data_Get_Vector(argv[2], y);
92
- if (argc == 4) {
93
- CHECK_WORKSPACE(argv[3]);
94
- Data_Get_Struct(argv[3], gsl_multifit_linear_workspace, space);
95
- } else {
96
- space = gsl_multifit_linear_alloc(x->size1, x->size2);
97
- flag = 1;
98
- }
99
- cov = gsl_matrix_alloc(x->size2, x->size2);
100
- c = gsl_vector_alloc(x->size2);
101
- status = gsl_multifit_wlinear(x, w, y, c, cov, &chisq, space);
102
- if (flag == 1) gsl_multifit_linear_free(space);
103
- vc = Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, c);
104
- vcov = Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, cov);
105
- return rb_ary_new3(4, vc, vcov, rb_float_new(chisq), INT2FIX(status));
106
- }
107
-
108
- static void calc_X_power(gsl_matrix *X, gsl_vector *x, size_t order)
109
- {
110
- size_t i, j;
111
- double val;
112
- for (i = 0; i < x->size; i++) {
113
- val = 1.0;
114
- gsl_matrix_set(X, i, 0, val);
115
- for (j = 1; j <= order; j++) {
116
- val *= gsl_vector_get(x, i);
117
- gsl_matrix_set(X, i, j, val);
118
- }
119
- }
120
- }
121
-
122
- static void calc_X_legendre(gsl_matrix *X, gsl_vector *v, size_t order)
123
- {
124
- size_t i, n;
125
- double a, b, c, x;
126
- for (i = 0; i < v->size; i++) {
127
- a = 1.0;
128
- b = gsl_vector_get(v, i);
129
- gsl_matrix_set(X, i, 0, a);
130
- gsl_matrix_set(X, i, 1, b);
131
- for (n = 2; n <= order; n++) {
132
- x = gsl_vector_get(v, i);
133
- c = ((2*n-1)*x*b - (n-1)*a)/n;
134
- gsl_matrix_set(X, i, n, c);
135
- a = b;
136
- b = c;
137
- }
138
- }
139
- }
140
-
141
- static VALUE rb_gsl_multifit_XXXfit(int argc, VALUE *argv, VALUE obj,
142
- void (*fn)(gsl_matrix*, gsl_vector*,size_t))
143
- {
144
- gsl_multifit_linear_workspace *space = NULL;
145
- gsl_matrix *X = NULL, *cov = NULL;
146
- gsl_vector *x, *y = NULL, *w, *c = NULL, *err;
147
- gsl_vector_view xx, yy, ww;
148
- size_t order, i;
149
- double chisq;
150
- int status, flag = 0, flagw = 0;
151
- VALUE vc, verr;
152
- if (argc != 3 && argc != 4 && argc != 5)
153
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 3 or 4)", argc);
154
- x = &xx.vector;
155
- w = &ww.vector;
156
- y = &yy.vector;
157
- Data_Get_Vector(argv[0], x);
158
- if (argc >= 3 && VECTOR_P(argv[2])) {
159
- Data_Get_Vector(argv[1], w);
160
- Data_Get_Vector(argv[2], y);
161
- order = NUM2INT(argv[3]);
162
- flagw = 1;
163
- } else {
164
- Data_Get_Vector(argv[1], y);
165
- order = NUM2INT(argv[2]);
166
- flagw = 0;
167
- }
168
- if (rb_obj_is_kind_of(argv[argc-1], cgsl_multifit_workspace)) {
169
- Data_Get_Struct(argv[argc-1], gsl_multifit_linear_workspace, space);
170
- } else {
171
- space = gsl_multifit_linear_alloc(x->size, order + 1);
172
- flag = 1;
173
- }
174
- cov = gsl_matrix_alloc(order + 1, order + 1);
175
- c = gsl_vector_alloc(order + 1);
176
- X = gsl_matrix_alloc(x->size, order + 1);
177
- (*fn)(X, x, order);
178
- if (flagw == 0) status = gsl_multifit_linear(X, y, c, cov, &chisq, space);
179
- else status = gsl_multifit_wlinear(X, w, y, c, cov, &chisq, space);
180
- if (flag == 1) gsl_multifit_linear_free(space);
181
- err = gsl_vector_alloc(order + 1);
182
- vc = Data_Wrap_Struct(cgsl_poly, 0, gsl_vector_free, c);
183
- verr = Data_Wrap_Struct(cgsl_poly, 0, gsl_vector_free, err);
184
- for (i = 0; i < err->size; i++)
185
- gsl_vector_set(err, i, sqrt(chisq/((double)x->size-err->size)*gsl_matrix_get(cov, i, i)));
186
- gsl_matrix_free(X);
187
- gsl_matrix_free(cov);
188
- return rb_ary_new3(4, vc, verr, rb_float_new(chisq), INT2FIX(status));
189
- }
190
-
191
- static VALUE rb_gsl_multifit_polyfit(int argc, VALUE *argv, VALUE obj)
192
- {
193
- return rb_gsl_multifit_XXXfit(argc, argv, obj, calc_X_power);
194
- }
195
-
196
- static VALUE rb_gsl_multifit_legfit(int argc, VALUE *argv, VALUE obj)
197
- {
198
- return rb_gsl_multifit_XXXfit(argc, argv, obj, calc_X_legendre);
199
- }
200
-
201
- /**********/
202
-
203
- static VALUE rb_gsl_multifit_fdfsolver_new(int argc, VALUE *argv, VALUE klass)
204
- {
205
- const gsl_multifit_fdfsolver_type *T;
206
- gsl_multifit_fdfsolver *solver = NULL;
207
- size_t n, p;
208
- char name[64];
209
- switch (argc) {
210
- case 3:
211
- switch (TYPE(argv[0])) {
212
- case T_STRING:
213
- strcpy(name, STR2CSTR(argv[0]));
214
- if (str_tail_grep(name, "lmsder") == 0) {
215
- T = gsl_multifit_fdfsolver_lmsder;
216
- } else if (str_tail_grep(name, "lmder") == 0) {
217
- T = gsl_multifit_fdfsolver_lmder;
218
- } else {
219
- rb_raise(rb_eTypeError, "unknown solver type %s (lmsder of lmder)",
220
- name);
221
- }
222
- break;
223
- case T_FIXNUM:
224
- switch (FIX2INT(argv[0])) {
225
- case GSL_MULTIFIT_FDFSOLVER_LMSDER:
226
- T = gsl_multifit_fdfsolver_lmsder;
227
- break;
228
- case GSL_MULTIFIT_FDFSOLVER_LMDER:
229
- T = gsl_multifit_fdfsolver_lmder;
230
- break;
231
- default:
232
- rb_raise(rb_eTypeError,
233
- "unknown solver type (GSL::MultiFit::FdfSolver::LMSDER or LMDER expected)");
234
- break;
235
- }
236
- break;
237
- default:
238
- rb_raise(rb_eTypeError, "wrong argument type %s (Fixnum or String)",
239
- rb_class2name(CLASS_OF(argv[0])));
240
- break;
241
- }
242
- CHECK_FIXNUM(argv[1]); CHECK_FIXNUM(argv[2]);
243
- n = FIX2INT(argv[1]);
244
- p = FIX2INT(argv[2]);
245
- break;
246
- case 2:
247
- CHECK_FIXNUM(argv[0]); CHECK_FIXNUM(argv[1]);
248
- T = gsl_multifit_fdfsolver_lmsder;
249
- n = FIX2INT(argv[0]);
250
- p = FIX2INT(argv[1]);
251
- break;
252
- default:
253
- rb_raise(rb_eArgError, "wrong number of arguments");
254
- break;
255
- }
256
- solver = gsl_multifit_fdfsolver_alloc(T, n, p);
257
- return Data_Wrap_Struct(klass, 0, gsl_multifit_fdfsolver_free, solver);
258
- }
259
-
260
- static VALUE rb_gsl_multifit_fdfsolver_set(VALUE obj, VALUE ff, VALUE xx)
261
- {
262
- gsl_multifit_fdfsolver *solver = NULL;
263
- gsl_multifit_function_fdf *f = NULL;
264
- gsl_vector *x = NULL;
265
- int status;
266
- CHECK_MULTIFIT_FUNCTION_FDF(ff);
267
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
268
- Data_Get_Struct(ff, gsl_multifit_function_fdf, f);
269
- Data_Get_Vector(xx, x);
270
- status = gsl_multifit_fdfsolver_set(solver, f, x);
271
- return INT2FIX(status);
272
- }
273
-
274
- static VALUE rb_gsl_multifit_fdfsolver_name(VALUE obj)
275
- {
276
- gsl_multifit_fdfsolver *solver = NULL;
277
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
278
- return rb_str_new2(gsl_multifit_fdfsolver_name(solver));
279
- }
280
-
281
- static VALUE rb_gsl_multifit_fdfsolver_iterate(VALUE obj)
282
- {
283
- gsl_multifit_fdfsolver *solver = NULL;
284
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
285
- return INT2FIX(gsl_multifit_fdfsolver_iterate(solver));
286
- }
287
-
288
- static VALUE rb_gsl_multifit_fdfsolver_position(VALUE obj)
289
- {
290
- gsl_multifit_fdfsolver *solver = NULL;
291
- gsl_vector *x = NULL;
292
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
293
- x = gsl_multifit_fdfsolver_position(solver);
294
- return Data_Wrap_Struct(cgsl_vector_view_ro, 0, NULL, x);
295
- }
296
-
297
- static VALUE rb_gsl_multifit_fdfsolver_print_state(VALUE obj, VALUE i)
298
- {
299
- gsl_multifit_fdfsolver *solver = NULL;
300
- CHECK_FIXNUM(i);
301
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
302
- printf("iter: %d x = %15.8f %15.8f %15.8f |f(x)| = %g\n",
303
- (int) FIX2INT(i), gsl_vector_get(solver->x, 0), gsl_vector_get(solver->x, 1),
304
- gsl_vector_get(solver->x, 2), gsl_blas_dnrm2(solver->f));
305
- return Qtrue;
306
- }
307
-
308
- static VALUE rb_gsl_multifit_fdfsolver_fdf(VALUE obj)
309
- {
310
- gsl_multifit_fdfsolver *solver = NULL;
311
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
312
- return Data_Wrap_Struct(cgsl_multifit_function_fdf, 0, NULL, solver->fdf);
313
- }
314
-
315
- static VALUE rb_gsl_multifit_fdfsolver_test_delta(VALUE obj, VALUE r, VALUE a)
316
- {
317
- gsl_multifit_fdfsolver *solver = NULL;
318
- Need_Float(r); Need_Float(a);
319
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
320
- return INT2FIX(gsl_multifit_test_delta(solver->dx, solver->x, NUM2DBL(r), NUM2DBL(a)));
321
- }
322
-
323
- static VALUE rb_gsl_multifit_fdfsolver_test_gradient(int argc, VALUE *argv, VALUE obj)
324
- {
325
- gsl_multifit_fdfsolver *solver = NULL;
326
- gsl_vector *g = NULL;
327
- int status;
328
- double epsabs;
329
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
330
- switch (argc) {
331
- case 1:
332
- Need_Float(argv[0]);
333
- g = gsl_vector_alloc(solver->x->size);
334
- gsl_multifit_gradient(solver->J, solver->f, g);
335
- epsabs = NUM2DBL(argv[0]);
336
- status = gsl_multifit_test_gradient(g, epsabs);
337
- gsl_vector_free(g);
338
- break;
339
- case 2:
340
- Need_Float(argv[1]);
341
- Data_Get_Vector(argv[0], g);
342
- epsabs = NUM2DBL(argv[1]);
343
- status = gsl_multifit_test_gradient(g, epsabs);
344
- break;
345
- default:
346
- rb_raise(rb_eArgError, "wrong number of arguments");
347
- break;
348
- }
349
- return INT2FIX(status);
350
- }
351
-
352
- static VALUE rb_gsl_multifit_fdfsolver_gradient(int argc, VALUE *argv, VALUE obj)
353
- {
354
- gsl_multifit_fdfsolver *solver = NULL;
355
- gsl_vector *g = NULL;
356
- // local variable "status" declared and set, but never used
357
- //int status;
358
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
359
- if (argc == 1) {
360
- Data_Get_Vector(argv[0], g);
361
- return INT2FIX(gsl_multifit_gradient(solver->J, solver->f, g));
362
- } else {
363
- g = gsl_vector_alloc(solver->x->size);
364
- /*status =*/ gsl_multifit_gradient(solver->J, solver->f, g);
365
- return Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, g);
366
- }
367
- }
368
-
369
- static VALUE rb_gsl_multifit_fdfsolver_covar(int argc, VALUE *argv, VALUE obj)
370
- {
371
- gsl_multifit_fdfsolver *solver = NULL;
372
- gsl_matrix *covar = NULL;
373
- double epsrel;
374
- // local variable "status" declared and set, but never used
375
- //int status;
376
- if (argc < 1) rb_raise(rb_eArgError, "too few arguments");
377
- Need_Float(argv[0]);
378
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
379
- epsrel = NUM2DBL(argv[0]);
380
- switch (argc) {
381
- case 1:
382
- covar = gsl_matrix_alloc(solver->x->size, solver->x->size);
383
- /*status =*/ gsl_multifit_covar(solver->J, epsrel, covar);
384
- return Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, covar);
385
- break;
386
- case 2:
387
- Data_Get_Matrix(argv[1], covar);
388
- return INT2FIX(gsl_multifit_covar(solver->J, epsrel, covar));
389
- break;
390
- default:
391
- rb_raise(rb_eArgError, "wrong number of arguments");
392
- break;
393
- }
394
- }
395
-
396
- static VALUE rb_gsl_multifit_fdfsolver_x(VALUE obj)
397
- {
398
- gsl_multifit_fdfsolver *solver = NULL;
399
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
400
- return Data_Wrap_Struct(cgsl_vector_view_ro, 0, NULL, solver->x);
401
- }
402
-
403
- static VALUE rb_gsl_multifit_fdfsolver_dx(VALUE obj)
404
- {
405
- gsl_multifit_fdfsolver *solver = NULL;
406
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
407
- return Data_Wrap_Struct(cgsl_vector_view_ro, 0, NULL, solver->dx);
408
- }
409
-
410
- static VALUE rb_gsl_multifit_fdfsolver_f(VALUE obj)
411
- {
412
- gsl_multifit_fdfsolver *solver = NULL;
413
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
414
- return Data_Wrap_Struct(cgsl_vector_view_ro, 0, NULL, solver->f);
415
- }
416
-
417
- static VALUE rb_gsl_multifit_fdfsolver_J(VALUE obj)
418
- {
419
- gsl_multifit_fdfsolver *solver = NULL;
420
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
421
- return Data_Wrap_Struct(cgsl_matrix_view_ro, 0, NULL, solver->J);
422
- }
423
-
424
- /* singleton */
425
- static VALUE rb_gsl_multifit_test_delta(VALUE obj, VALUE ddx, VALUE xx, VALUE a, VALUE r)
426
- {
427
- gsl_vector *dx = NULL, *x = NULL;
428
- Need_Float(a); Need_Float(r);
429
- Data_Get_Vector(ddx, dx);
430
- Data_Get_Vector(xx, x);
431
- return INT2FIX(gsl_multifit_test_delta(dx, x, NUM2DBL(a), NUM2DBL(r)));
432
- }
433
-
434
- static VALUE rb_gsl_multifit_test_gradient(VALUE obj, VALUE gg, VALUE a)
435
- {
436
- gsl_vector *g = NULL;
437
- Need_Float(a);
438
- Data_Get_Vector(gg, g);
439
- return INT2FIX(gsl_multifit_test_gradient(g, NUM2DBL(a)));
440
- }
441
-
442
- static VALUE rb_gsl_multifit_gradient(int argc, VALUE *argv, VALUE obj)
443
- {
444
- gsl_vector *g = NULL, *f = NULL;
445
- gsl_matrix *J = NULL;
446
- // local variable "status" declared and set, but never used
447
- //int status;
448
- switch (argc) {
449
- case 2:
450
- Data_Get_Matrix(argv[0], J);
451
- Data_Get_Vector(argv[1], f);
452
- g = gsl_vector_alloc(f->size);
453
- /*status =*/ gsl_multifit_gradient(J, f, g);
454
- return Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, g);
455
- break;
456
- case 3:
457
- Data_Get_Matrix(argv[0], J);
458
- Data_Get_Vector(argv[1], f);
459
- Data_Get_Vector(argv[2], g);
460
- return INT2FIX(gsl_multifit_gradient(J, f, g));
461
- break;
462
- default:
463
- rb_raise(rb_eArgError, "wrong number of arguments");
464
- break;
465
- }
466
- }
467
-
468
- static VALUE rb_gsl_multifit_covar(int argc, VALUE *argv, VALUE obj)
469
- {
470
- gsl_matrix *J = NULL, *covar = NULL;
471
- double epsrel;
472
- int status;
473
- switch (argc) {
474
- case 2:
475
- Need_Float(argv[1]);
476
- Data_Get_Matrix(argv[0], J);
477
- epsrel = NUM2DBL(argv[1]);
478
- covar = gsl_matrix_alloc(J->size2, J->size2);
479
- /*status =*/ gsl_multifit_covar(J, epsrel, covar);
480
- return Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, covar);
481
- break;
482
- case 3:
483
- Need_Float(argv[1]);
484
- Data_Get_Matrix(argv[0], J);
485
- epsrel = NUM2DBL(argv[1]);
486
- Data_Get_Matrix(argv[2], covar);
487
- status = gsl_multifit_covar(J, epsrel, covar);
488
- return INT2FIX(status);
489
- break;
490
- default:
491
- rb_raise(rb_eArgError, "wrong number of arguments");
492
- break;
493
- }
494
- }
495
-
496
- static void rb_gsl_multifit_define_const(VALUE klass)
497
- {
498
- rb_define_const(klass, "LMSDER",
499
- INT2FIX(GSL_MULTIFIT_FDFSOLVER_LMSDER));
500
- rb_define_const(klass, "LMDER",
501
- INT2FIX(GSL_MULTIFIT_FDFSOLVER_LMDER));
502
-
503
- rb_define_const(klass, "Lmsder",
504
- INT2FIX(GSL_MULTIFIT_FDFSOLVER_LMSDER));
505
- rb_define_const(klass, "Lmder",
506
- INT2FIX(GSL_MULTIFIT_FDFSOLVER_LMDER));
507
- }
508
-
509
- static void gsl_multifit_function_fdf_free(gsl_multifit_function_fdf *f);
510
- static void gsl_multifit_function_fdf_free(gsl_multifit_function_fdf *f)
511
- {
512
- free((gsl_multifit_function_fdf *) f);
513
- }
514
-
515
- static void gsl_multifit_function_fdf_mark(gsl_multifit_function_fdf *F);
516
- static void gsl_multifit_function_fdf_mark(gsl_multifit_function_fdf *F)
517
- {
518
- rb_gc_mark((VALUE) F->params);
519
- }
520
-
521
- static int gsl_multifit_function_fdf_f(const gsl_vector *x, void *params,
522
- gsl_vector *f);
523
- static int gsl_multifit_function_fdf_df(const gsl_vector *x, void *params,
524
- gsl_matrix *J);
525
- static int gsl_multifit_function_fdf_fdf(const gsl_vector *x, void *params,
526
- gsl_vector *f, gsl_matrix *J);
527
-
528
- static VALUE rb_gsl_multifit_function_fdf_set_procs(int argc, VALUE *argv, VALUE obj);
529
-
530
- static VALUE rb_gsl_multifit_function_fdf_new(int argc, VALUE *argv, VALUE klass)
531
- {
532
- gsl_multifit_function_fdf *func = NULL;
533
- VALUE obj;
534
- func = ALLOC(gsl_multifit_function_fdf);
535
- func->f = &gsl_multifit_function_fdf_f;
536
- func->df = &gsl_multifit_function_fdf_df;
537
- func->fdf = &gsl_multifit_function_fdf_fdf;
538
- func->params = NULL;
539
- obj = Data_Wrap_Struct(klass, gsl_multifit_function_fdf_mark, gsl_multifit_function_fdf_free, func);
540
- switch (argc) {
541
- case 0:
542
- case 1:
543
- break;
544
- case 2:
545
- case 3:
546
- rb_gsl_multifit_function_fdf_set_procs(argc, argv, obj);
547
- break;
548
- default:
549
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 0-3)", argc);
550
- break;
551
- }
552
- return obj;
553
- }
554
-
555
- static VALUE rb_gsl_multifit_function_fdf_set_procs(int argc, VALUE *argv, VALUE obj)
556
- {
557
- gsl_multifit_function_fdf *func = NULL;
558
- VALUE ary;
559
- Data_Get_Struct(obj, gsl_multifit_function_fdf, func);
560
- if (func->params == NULL) {
561
- ary = rb_ary_new2(4);
562
- /* (VALUE) func->params = ary;*/
563
- func->params = (void *) ary;
564
- } else {
565
- ary = (VALUE) func->params;
566
- }
567
- rb_ary_store(ary, 0, argv[0]);
568
- rb_ary_store(ary, 1, argv[1]);
569
- switch (argc) {
570
- case 2:
571
- break;
572
- case 3:
573
- if (TYPE(argv[2]) == T_FIXNUM) {
574
- func->p = FIX2INT(argv[2]);
575
- rb_ary_store(ary, 2, Qnil);
576
- } else rb_ary_store(ary, 2, argv[2]);
577
- break;
578
- case 4:
579
- if (TYPE(argv[2]) == T_FIXNUM) {
580
- func->p = FIX2INT(argv[2]);
581
- rb_ary_store(ary, 2, argv[3]);
582
- } else {
583
- func->p = FIX2INT(argv[3]);
584
- rb_ary_store(ary, 2, argv[2]);
585
- }
586
- break;
587
- default:
588
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 3 or 4)", argc);
589
- break;
590
- }
591
- return obj;
592
- }
593
-
594
- static VALUE rb_gsl_multifit_function_fdf_set_data(int argc, VALUE *argv, VALUE obj)
595
- {
596
- VALUE ary, ary2;
597
- gsl_multifit_function_fdf *func = NULL;
598
- Data_Get_Struct(obj, gsl_multifit_function_fdf, func);
599
- if (func->params == NULL) {
600
- ary = rb_ary_new2(4);
601
- /* (VALUE) func->params = ary;*/
602
- func->params = (void *) ary;
603
- } else {
604
- ary = (VALUE) func->params;
605
- }
606
- switch (argc) {
607
- case 2:
608
- ary2 = rb_ary_new3(2, argv[0], argv[1]); /* t, y */
609
- break;
610
- case 3:
611
- ary2 = rb_ary_new3(3, argv[0], argv[1], argv[2]); /* t, y, sigma */
612
- break;
613
- default:
614
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 2 or 3)", argc);
615
- break;
616
- }
617
- func->n = NUM2INT(rb_funcall(argv[0], rb_intern("size"), 0));
618
- rb_ary_store(ary, 3, ary2);
619
- return obj;
620
- }
621
-
622
- static int gsl_multifit_function_fdf_f(const gsl_vector *x, void *params,
623
- gsl_vector *f)
624
- {
625
- VALUE vt_y_sigma, vt, vy, vsigma, vf, vx, proc, ary;
626
- ary = (VALUE) params;
627
- vt_y_sigma = rb_ary_entry(ary, 3);
628
- proc = rb_ary_entry(ary, 0);
629
- vx = Data_Wrap_Struct(cgsl_vector, 0, NULL, (gsl_vector *) x);
630
- vf = Data_Wrap_Struct(cgsl_vector, 0, NULL, f);
631
- switch (RARRAY_LEN(vt_y_sigma)) {
632
- case 2:
633
- vt = rb_ary_entry(vt_y_sigma, 0);
634
- vy = rb_ary_entry(vt_y_sigma, 1);
635
- rb_funcall(proc, RBGSL_ID_call, 4, vx, vt, vy, vf);
636
- break;
637
- case 3:
638
- vt = rb_ary_entry(vt_y_sigma, 0);
639
- vy = rb_ary_entry(vt_y_sigma, 1);
640
- vsigma = rb_ary_entry(vt_y_sigma,2);
641
- rb_funcall(proc, RBGSL_ID_call, 5, vx, vt, vy, vsigma, vf);
642
- break;
643
- default:
644
- rb_raise(rb_eArgError, "bad argument");
645
- break;
646
- }
647
- return GSL_SUCCESS;
648
- }
649
-
650
- static int gsl_multifit_function_fdf_df(const gsl_vector *x, void *params,
651
- gsl_matrix *J)
652
- {
653
- VALUE vt_y_sigma, vt, vy, vsigma, vJ, vx, proc, ary;
654
- ary = (VALUE) params;
655
- vt_y_sigma = rb_ary_entry(ary, 3);
656
- proc = rb_ary_entry(ary, 1);
657
- vx = Data_Wrap_Struct(cgsl_vector, 0, NULL, (gsl_vector *) x);
658
- vJ = Data_Wrap_Struct(cgsl_matrix, 0, NULL, J);
659
- switch (RARRAY_LEN(vt_y_sigma)) {
660
- case 2:
661
- vt = rb_ary_entry(vt_y_sigma, 0);
662
- vy = rb_ary_entry(vt_y_sigma, 1);
663
- rb_funcall(proc, RBGSL_ID_call, 4, vx, vt, vy, vJ);
664
- break;
665
- case 3:
666
- vt = rb_ary_entry(vt_y_sigma, 0);
667
- vy = rb_ary_entry(vt_y_sigma, 1);
668
- vsigma = rb_ary_entry(vt_y_sigma,2);
669
- rb_funcall(proc, RBGSL_ID_call, 5, vx, vt, vy, vsigma, vJ);
670
- break;
671
- default:
672
- rb_raise(rb_eArgError, "bad argument");
673
- break;
674
- }
675
- return GSL_SUCCESS;
676
- }
677
-
678
- static int gsl_multifit_function_fdf_fdf(const gsl_vector *x, void *params,
679
- gsl_vector *f, gsl_matrix *J)
680
- {
681
- VALUE vt_y_sigma, vt, vy, vsigma, vf, vJ, vx, proc_f, proc_df, proc_fdf;
682
- VALUE ary;
683
- ary = (VALUE) params;
684
- vt_y_sigma = rb_ary_entry(ary, 3);
685
- proc_f = rb_ary_entry(ary, 0);
686
- proc_df = rb_ary_entry(ary, 1);
687
- proc_fdf = rb_ary_entry(ary, 2);
688
- vx = Data_Wrap_Struct(cgsl_vector, 0, NULL, (gsl_vector *) x);
689
- vf = Data_Wrap_Struct(cgsl_vector, 0, NULL, f);
690
- vJ = Data_Wrap_Struct(cgsl_matrix, 0, NULL, J);
691
- switch (RARRAY_LEN(vt_y_sigma)) {
692
- case 2:
693
- vt = rb_ary_entry(vt_y_sigma, 0);
694
- vy = rb_ary_entry(vt_y_sigma, 1);
695
- if (NIL_P(proc_fdf)) {
696
- rb_funcall(proc_f, RBGSL_ID_call, 4, vx, vt, vy, vf);
697
- rb_funcall(proc_df, RBGSL_ID_call, 4, vx, vt, vy, vJ);
698
- } else
699
- rb_funcall(proc_fdf, RBGSL_ID_call, 5, vx, vt, vy, vf, vJ);
700
- break;
701
- case 3:
702
- vt = rb_ary_entry(vt_y_sigma, 0);
703
- vy = rb_ary_entry(vt_y_sigma, 1);
704
- vsigma = rb_ary_entry(vt_y_sigma,2);
705
- if (NIL_P(proc_fdf)) {
706
- rb_funcall(proc_f, RBGSL_ID_call, 5, vx, vt, vy, vsigma, vf);
707
- rb_funcall(proc_df, RBGSL_ID_call, 5, vx, vt, vy, vsigma, vJ);
708
- } else
709
- rb_funcall(proc_fdf, RBGSL_ID_call, 6, vx, vt, vy, vsigma, vf, vJ);
710
- break;
711
- default:
712
- rb_raise(rb_eArgError, "bad argument");
713
- break;
714
- }
715
- return GSL_SUCCESS;
716
- }
717
-
718
- static VALUE rb_gsl_multifit_function_fdf_params(VALUE obj)
719
- {
720
- gsl_multifit_function_fdf *f = NULL;
721
- Data_Get_Struct(obj, gsl_multifit_function_fdf, f);
722
- return (VALUE) f->params;
723
- }
724
-
725
- static VALUE rb_gsl_multifit_function_fdf_n(VALUE obj)
726
- {
727
- gsl_multifit_function_fdf *f = NULL;
728
- Data_Get_Struct(obj, gsl_multifit_function_fdf, f);
729
- return INT2FIX(f->n);
730
- }
731
-
732
- static VALUE rb_gsl_multifit_function_fdf_set_n(VALUE obj, VALUE n)
733
- {
734
- gsl_multifit_function_fdf *f = NULL;
735
- Data_Get_Struct(obj, gsl_multifit_function_fdf, f);
736
- f->n = FIX2INT(n);
737
- return obj;
738
- }
739
-
740
- static VALUE rb_gsl_multifit_function_fdf_p(VALUE obj)
741
- {
742
- gsl_multifit_function_fdf *f = NULL;
743
- Data_Get_Struct(obj, gsl_multifit_function_fdf, f);
744
- return INT2FIX(f->p);
745
- }
746
-
747
- /*****/
748
- struct fitting_xydata {
749
- gsl_vector *x, *y, *w;
750
- };
751
-
752
- /* Gaussian fit
753
- y = y0 + A exp(-(x-x0/sigma)^2)
754
- v[0] = y0
755
- v[1] = A
756
- v[2] = x0
757
- v[3] = var = sigma^2
758
- */
759
- static int Gaussian_f(const gsl_vector *v, void *data, gsl_vector *f)
760
- {
761
- gsl_vector *x, *y, *w;
762
- double y0, A, x0, var, xi, yi, wi;
763
- size_t i;
764
- struct fitting_xydata *xydata;
765
- xydata = (struct fitting_xydata*) data;
766
- x = xydata->x;
767
- y = xydata->y;
768
- w = xydata->w;
769
- var = gsl_vector_get(v, 3);
770
- x0 = gsl_vector_get(v, 2);
771
- A = gsl_vector_get(v, 1);
772
- y0 = gsl_vector_get(v, 0);
773
- for (i = 0; i < x->size; i++) {
774
- xi = gsl_vector_get(x, i);
775
- yi = gsl_vector_get(y, i);
776
- if (w) wi = gsl_vector_get(w, i);
777
- else wi = 1.0;
778
- gsl_vector_set(f, i, (A*exp(-(xi - x0)*(xi - x0)/var/2.0) + y0 - yi)*wi);
779
- }
780
- return GSL_SUCCESS;
781
- }
782
-
783
- static int Gaussian_df(const gsl_vector *v, void *data, gsl_matrix *J)
784
- {
785
- double A, x0, var, xi, yy, wi;
786
- size_t i;
787
- struct fitting_xydata *xydata;
788
- gsl_vector *x, *w;
789
- xydata = (struct fitting_xydata*) data;
790
- x = xydata->x;
791
- w = xydata->w;
792
- var = gsl_vector_get(v, 3);
793
- x0 = gsl_vector_get(v, 2);
794
- A = gsl_vector_get(v, 1);
795
- for (i = 0; i < x->size; i++) {
796
- xi = gsl_vector_get(x, i);
797
- if (w) wi = gsl_vector_get(w, i);
798
- else wi = 1.0;
799
- yy = exp(-(xi - x0)*(xi - x0)/var/2.0);
800
- gsl_matrix_set(J, i, 3, A*yy*(xi - x0)*(xi - x0)/2/var/var*wi);
801
- gsl_matrix_set(J, i, 2, A*yy*(xi - x0)/var*wi);
802
- gsl_matrix_set(J, i, 1, yy*wi);
803
- gsl_matrix_set(J, i, 0, 1.0*wi);
804
- }
805
- return GSL_SUCCESS;
806
- }
807
-
808
- static int Gaussian_fdf(const gsl_vector *v, void *data,
809
- gsl_vector *f, gsl_matrix *J)
810
- {
811
- Gaussian_f(v, data, f);
812
- Gaussian_df(v, data, J);
813
- return GSL_SUCCESS;
814
- }
815
-
816
- /* 2 Gaussian fit
817
- y = y0 + A1 exp(-(x-x01/sigma1)^2) + A2 exp(-(x-x02/sigma2)^2)
818
- v[0] = y0
819
- v[1] = A1
820
- v[2] = x01
821
- v[3] = var1 = sigma1^2
822
- v[4] = A2
823
- v[5] = x02
824
- v[6] = var2 = sigma2^2
825
- */
826
- static int Gaussian_2peaks_f(const gsl_vector *v, void *data, gsl_vector *f)
827
- {
828
- gsl_vector *x, *y, *w;
829
- double y0, A1, x01, var1, A2, x02, var2, xi, yi, wi;
830
- size_t i;
831
- struct fitting_xydata *xydata;
832
- xydata = (struct fitting_xydata*) data;
833
- x = xydata->x;
834
- y = xydata->y;
835
- w = xydata->w;
836
- y0 = gsl_vector_get(v, 0);
837
- A1 = gsl_vector_get(v, 1);
838
- x01 = gsl_vector_get(v, 2);
839
- var1 = gsl_vector_get(v, 3);
840
- A2 = gsl_vector_get(v, 4);
841
- x02 = gsl_vector_get(v, 5);
842
- var2 = gsl_vector_get(v, 6);
843
- for (i = 0; i < x->size; i++) {
844
- xi = gsl_vector_get(x, i);
845
- yi = gsl_vector_get(y, i);
846
- if (w) wi = gsl_vector_get(w, i);
847
- else wi = 1.0;
848
- gsl_vector_set(f, i, (A1*exp(-(xi - x01)*(xi - x01)/var1/2.0) + A2*exp(-(xi - x02)*(xi - x02)/var2/2.0) + y0 - yi)*wi);
849
- }
850
- return GSL_SUCCESS;
851
- }
852
-
853
- static int Gaussian_2peaks_df(const gsl_vector *v, void *data, gsl_matrix *J)
854
- {
855
- double A1, x01, var1, A2, x02, var2, xi, yy, wi;
856
- size_t i;
857
- struct fitting_xydata *xydata;
858
- gsl_vector *x, *w;
859
- xydata = (struct fitting_xydata*) data;
860
- x = xydata->x;
861
- w = xydata->w;
862
- A1 = gsl_vector_get(v, 1);
863
- x01 = gsl_vector_get(v, 2);
864
- var1 = gsl_vector_get(v, 3);
865
- A2 = gsl_vector_get(v, 4);
866
- x02 = gsl_vector_get(v, 5);
867
- var2 = gsl_vector_get(v, 6);
868
- for (i = 0; i < x->size; i++) {
869
- xi = gsl_vector_get(x, i);
870
- if (w) wi = gsl_vector_get(w, i);
871
- else wi = 1.0;
872
- yy = exp(-(xi - x01)*(xi - x01)/var1/2.0);
873
- gsl_matrix_set(J, i, 0, 1.0*wi);
874
- gsl_matrix_set(J, i, 1, yy*wi);
875
- gsl_matrix_set(J, i, 2, A1*yy*(xi - x01)/var1*wi);
876
- gsl_matrix_set(J, i, 3, A1*yy*(xi - x01)*(xi - x01)/2/var1/var1*wi);
877
-
878
- yy = exp(-(xi - x02)*(xi - x02)/var2/2.0);
879
- gsl_matrix_set(J, i, 4, yy*wi);
880
- gsl_matrix_set(J, i, 5, A2*yy*(xi - x02)/var2*wi);
881
- gsl_matrix_set(J, i, 6, A2*yy*(xi - x02)*(xi - x02)/2/var2/var2*wi);
882
- }
883
- return GSL_SUCCESS;
884
- }
885
-
886
- static int Gaussian_2peaks_fdf(const gsl_vector *v, void *data,
887
- gsl_vector *f, gsl_matrix *J)
888
- {
889
- Gaussian_2peaks_f(v, data, f);
890
- Gaussian_2peaks_df(v, data, J);
891
- return GSL_SUCCESS;
892
- }
893
-
894
- /* Exponential fit
895
- y = y0 + A exp(-bx)
896
- v[0] = y0
897
- v[1] = A
898
- v[2] = b
899
- */
900
- static int Exponential_f(const gsl_vector *v, void *data, gsl_vector *f)
901
- {
902
- gsl_vector *x, *y, *w;
903
- double y0, A, b, xi, yi, wi;
904
- size_t i;
905
- struct fitting_xydata *xydata;
906
- xydata = (struct fitting_xydata*) data;
907
- x = xydata->x;
908
- y = xydata->y;
909
- w = xydata->w;
910
- y0 = gsl_vector_get(v, 0);
911
- A = gsl_vector_get(v, 1);
912
- b = gsl_vector_get(v, 2);
913
- for (i = 0; i < x->size; i++) {
914
- xi = gsl_vector_get(x, i);
915
- if (w) wi = gsl_vector_get(w, i);
916
- else wi = 1.0;
917
- yi = gsl_vector_get(y, i);
918
- gsl_vector_set(f, i, (A*exp(-b*xi) + y0 - yi)*wi);
919
- }
920
- return GSL_SUCCESS;
921
- }
922
-
923
- static int Exponential_df(const gsl_vector *v, void *data, gsl_matrix *J)
924
- {
925
- double A, b, xi, yy, wi;
926
- size_t i;
927
- struct fitting_xydata *xydata;
928
- gsl_vector *x, *w;
929
- xydata = (struct fitting_xydata*) data;
930
- x = xydata->x;
931
- w = xydata->w;
932
- A = gsl_vector_get(v, 1);
933
- b = gsl_vector_get(v, 2);
934
- for (i = 0; i < x->size; i++) {
935
- xi = gsl_vector_get(x, i);
936
- if (w) wi = gsl_vector_get(w, i);
937
- else wi = 1.0;
938
- yy = exp(-xi*b);
939
- gsl_matrix_set(J, i, 0, 1.0*wi);
940
- gsl_matrix_set(J, i, 1, yy*wi);
941
- gsl_matrix_set(J, i, 2, -A*yy*xi*wi);
942
- }
943
- return GSL_SUCCESS;
944
- }
945
-
946
- static int Exponential_fdf(const gsl_vector *v, void *data,
947
- gsl_vector *f, gsl_matrix *J)
948
- {
949
- Exponential_f(v, data, f);
950
- Exponential_df(v, data, J);
951
- return GSL_SUCCESS;
952
- }
953
-
954
-
955
- /* Double Exponential fit
956
- y = y0 + A1 exp(-b1 x) + A2 exp(-b2 x)
957
- v[0] = y0
958
- v[1] = A1
959
- v[2] = b1
960
- v[3] = A2
961
- v[4] = b2
962
- */
963
- static int DblExponential_f(const gsl_vector *v, void *data, gsl_vector *f)
964
- {
965
- gsl_vector *x, *y, *w;
966
- double y0, A1, b1, A2, b2, xi, yi, wi;
967
- size_t i;
968
- struct fitting_xydata *xydata;
969
- xydata = (struct fitting_xydata*) data;
970
- x = xydata->x;
971
- y = xydata->y;
972
- w = xydata->w;
973
- y0 = gsl_vector_get(v, 0);
974
- A1 = gsl_vector_get(v, 1);
975
- b1 = gsl_vector_get(v, 2);
976
- A2 = gsl_vector_get(v, 3);
977
- b2 = gsl_vector_get(v, 4);
978
- for (i = 0; i < x->size; i++) {
979
- xi = gsl_vector_get(x, i);
980
- if (w) wi = gsl_vector_get(w, i);
981
- else wi = 1.0;
982
- yi = gsl_vector_get(y, i);
983
- gsl_vector_set(f, i, (A1*exp(-b1*xi) + A2*exp(-b2*xi) + y0 - yi)*wi);
984
- }
985
- return GSL_SUCCESS;
986
- }
987
-
988
- static int DblExponential_df(const gsl_vector *v, void *data, gsl_matrix *J)
989
- {
990
- double A1, b1, A2, b2, xi, yy1, yy2, wi;
991
- size_t i;
992
- struct fitting_xydata *xydata;
993
- gsl_vector *x, *w;
994
- xydata = (struct fitting_xydata*) data;
995
- x = xydata->x;
996
- w = xydata->w;
997
- A1 = gsl_vector_get(v, 1);
998
- b1 = gsl_vector_get(v, 2);
999
- A2 = gsl_vector_get(v, 3);
1000
- b2 = gsl_vector_get(v, 4);
1001
- for (i = 0; i < x->size; i++) {
1002
- xi = gsl_vector_get(x, i);
1003
- if (w) wi = gsl_vector_get(w, i);
1004
- else wi = 1.0;
1005
- yy1 = exp(-xi*b1);
1006
- yy2 = exp(-xi*b2);
1007
- gsl_matrix_set(J, i, 0, 1.0*wi);
1008
- gsl_matrix_set(J, i, 1, yy1*wi);
1009
- gsl_matrix_set(J, i, 2, -A1*yy1*xi*wi);
1010
- gsl_matrix_set(J, i, 3, yy2*wi);
1011
- gsl_matrix_set(J, i, 4, -A2*yy2*xi*wi);
1012
- }
1013
- return GSL_SUCCESS;
1014
- }
1015
-
1016
- static int DblExponential_fdf(const gsl_vector *v, void *data,
1017
- gsl_vector *f, gsl_matrix *J)
1018
- {
1019
- DblExponential_f(v, data, f);
1020
- DblExponential_df(v, data, J);
1021
- return GSL_SUCCESS;
1022
- }
1023
-
1024
- /* Lorentzian fit
1025
- y = y0 + A/((x-x0)^2 + B)
1026
- v[0] = y0
1027
- v[1] = A
1028
- v[2] = x0
1029
- v[3] = B
1030
- */
1031
- static int Lorentzian_f(const gsl_vector *v, void *data, gsl_vector *f)
1032
- {
1033
- gsl_vector *x, *y, *w;
1034
- double y0, A, x0, B, xi, yi, wi;
1035
- size_t i;
1036
- struct fitting_xydata *xydata;
1037
- xydata = (struct fitting_xydata*) data;
1038
- x = xydata->x;
1039
- y = xydata->y;
1040
- w = xydata->w;
1041
- y0 = gsl_vector_get(v, 0);
1042
- A = gsl_vector_get(v, 1);
1043
- x0 = gsl_vector_get(v, 2);
1044
- B = gsl_vector_get(v, 3);
1045
- for (i = 0; i < x->size; i++) {
1046
- xi = gsl_vector_get(x, i);
1047
- if (w) wi = gsl_vector_get(w, i);
1048
- else wi = 1.0;
1049
- yi = gsl_vector_get(y, i);
1050
- gsl_vector_set(f, i, (A/(gsl_pow_2(xi-x0)+B) + y0 - yi)*wi);
1051
- }
1052
- return GSL_SUCCESS;
1053
- }
1054
-
1055
- static int Lorentzian_df(const gsl_vector *v, void *data, gsl_matrix *J)
1056
- {
1057
- double A, B, x0, xi, yy, wi;
1058
- size_t i;
1059
- struct fitting_xydata *xydata;
1060
- gsl_vector *x, *w;
1061
- xydata = (struct fitting_xydata*) data;
1062
- x = xydata->x;
1063
- w = xydata->w;
1064
- A = gsl_vector_get(v, 1);
1065
- x0 = gsl_vector_get(v, 2);
1066
- B = gsl_vector_get(v, 3);
1067
- for (i = 0; i < x->size; i++) {
1068
- xi = gsl_vector_get(x, i);
1069
- if (w) wi = gsl_vector_get(w, i);
1070
- else wi = 1.0;
1071
- yy = gsl_pow_2(xi-x0)+B;
1072
- gsl_matrix_set(J, i, 0, 1.0*wi);
1073
- gsl_matrix_set(J, i, 1, 1.0/yy*wi);
1074
- gsl_matrix_set(J, i, 2, 2.0*A*(xi-x0)/yy/yy*wi);
1075
- gsl_matrix_set(J, i, 3, -A/yy/yy*wi);
1076
- }
1077
- return GSL_SUCCESS;
1078
- }
1079
-
1080
- static int Lorentzian_fdf(const gsl_vector *v, void *data,
1081
- gsl_vector *f, gsl_matrix *J)
1082
- {
1083
- Lorentzian_f(v, data, f);
1084
- Lorentzian_df(v, data, J);
1085
- return GSL_SUCCESS;
1086
- }
1087
-
1088
- /* Sinusoldal fit
1089
- y = y0 + A sin(fc x + phi)
1090
- v[0] = y0
1091
- v[1] = A
1092
- v[2] = fc
1093
- v[3] = phi
1094
- */
1095
- static int Sin_f(const gsl_vector *v, void *data, gsl_vector *f)
1096
- {
1097
- gsl_vector *x, *y, *w;
1098
- double y0, A, fc, phi, xi, yi, wi;
1099
- size_t i;
1100
- struct fitting_xydata *xydata;
1101
- xydata = (struct fitting_xydata*) data;
1102
- x = xydata->x;
1103
- y = xydata->y;
1104
- w = xydata->w;
1105
- y0 = gsl_vector_get(v, 0);
1106
- A = gsl_vector_get(v, 1);
1107
- fc = gsl_vector_get(v, 2);
1108
- phi = gsl_vector_get(v, 3);
1109
- for (i = 0; i < x->size; i++) {
1110
- xi = gsl_vector_get(x, i);
1111
- if (w) wi = gsl_vector_get(w, i);
1112
- else wi = 1.0;
1113
- yi = gsl_vector_get(y, i);
1114
- gsl_vector_set(f, i, (A*sin(fc*xi+phi) + y0 - yi)*wi);
1115
- }
1116
- return GSL_SUCCESS;
1117
- }
1118
-
1119
- static int Sin_df(const gsl_vector *v, void *data, gsl_matrix *J)
1120
- {
1121
- double A, fc, phi, xi, ys, yc, wi;
1122
- size_t i;
1123
- struct fitting_xydata *xydata;
1124
- gsl_vector *x, *w;
1125
- xydata = (struct fitting_xydata*) data;
1126
- x = xydata->x;
1127
- w = xydata->w;
1128
- A = gsl_vector_get(v, 1);
1129
- fc = gsl_vector_get(v, 2);
1130
- phi = gsl_vector_get(v, 3);
1131
- for (i = 0; i < x->size; i++) {
1132
- xi = gsl_vector_get(x, i);
1133
- if (w) wi = gsl_vector_get(w, i);
1134
- else wi = 1.0;
1135
- ys = sin(fc*xi + phi);
1136
- yc = cos(fc*xi + phi);
1137
- gsl_matrix_set(J, i, 0, 1.0*wi);
1138
- gsl_matrix_set(J, i, 1, ys*wi);
1139
- gsl_matrix_set(J, i, 2, A*yc*xi*wi);
1140
- gsl_matrix_set(J, i, 3, A*yc*wi);
1141
- }
1142
- return GSL_SUCCESS;
1143
- }
1144
-
1145
- static int Sin_fdf(const gsl_vector *v, void *data,
1146
- gsl_vector *f, gsl_matrix *J)
1147
- {
1148
- Sin_f(v, data, f);
1149
- Sin_df(v, data, J);
1150
- return GSL_SUCCESS;
1151
- }
1152
-
1153
- /* Hill's equation fit
1154
- y = y0 + (m - y0)/(1 + (xhalf/x)^r)
1155
- v[0] = y0
1156
- v[1] = m
1157
- v[2] = xhalf
1158
- v[3] = r
1159
- */
1160
- static int Hill_f(const gsl_vector *v, void *data, gsl_vector *f)
1161
- {
1162
- gsl_vector *x, *y, *w;
1163
- double y0, m, xhalf, r, xi, yi, wi;
1164
- size_t i;
1165
- struct fitting_xydata *xydata;
1166
- xydata = (struct fitting_xydata*) data;
1167
- x = xydata->x;
1168
- y = xydata->y;
1169
- w = xydata->w;
1170
- y0 = gsl_vector_get(v, 0);
1171
- m = gsl_vector_get(v, 1);
1172
- xhalf = gsl_vector_get(v, 2);
1173
- r = gsl_vector_get(v, 3);
1174
- for (i = 0; i < x->size; i++) {
1175
- xi = gsl_vector_get(x, i);
1176
- if (w) wi = gsl_vector_get(w, i);
1177
- else wi = 1.0;
1178
- yi = gsl_vector_get(y, i);
1179
- gsl_vector_set(f, i, ((m-y0)/(1.0+pow(xhalf/xi, r)) + y0 - yi)*wi);
1180
- }
1181
- return GSL_SUCCESS;
1182
- }
1183
-
1184
- static int Hill_df(const gsl_vector *v, void *data, gsl_matrix *J)
1185
- {
1186
- double y0, m, xhalf, r, yy, xi, wi, a;
1187
- size_t i;
1188
- struct fitting_xydata *xydata;
1189
- gsl_vector *x, *w;
1190
- xydata = (struct fitting_xydata*) data;
1191
- x = xydata->x;
1192
- w = xydata->w;
1193
- y0 = gsl_vector_get(v, 0);
1194
- m = gsl_vector_get(v, 1);
1195
- xhalf = gsl_vector_get(v, 2);
1196
- r = gsl_vector_get(v, 3);
1197
- for (i = 0; i < x->size; i++) {
1198
- xi = gsl_vector_get(x, i);
1199
- if (w) wi = gsl_vector_get(w, i);
1200
- else wi = 1.0;
1201
- a = pow(xhalf/xi, r);
1202
- yy = (1.0 + a);
1203
- gsl_matrix_set(J, i, 0, (1.0 - 1.0/yy)*wi);
1204
- gsl_matrix_set(J, i, 1, 1.0/yy*wi);
1205
- gsl_matrix_set(J, i, 2, -(m-y0)*r/xhalf*a/yy/yy*wi);
1206
- gsl_matrix_set(J, i, 3, -(m-y0)/yy/yy*a*log(xhalf/xi)*wi);
1207
- }
1208
- return GSL_SUCCESS;
1209
- }
1210
-
1211
- static int Hill_fdf(const gsl_vector *v, void *data,
1212
- gsl_vector *f, gsl_matrix *J)
1213
- {
1214
- Hill_f(v, data, f);
1215
- Hill_df(v, data, J);
1216
- return GSL_SUCCESS;
1217
- }
1218
-
1219
- /* Sigmoidal fit
1220
- y = y0 + m/(1 + exp((x0-x)/r))
1221
- v[0] = y0
1222
- v[1] = m
1223
- v[2] = x0
1224
- v[3] = r
1225
- */
1226
- static int Sigmoid_f(const gsl_vector *v, void *data, gsl_vector *f)
1227
- {
1228
- gsl_vector *x, *y, *w;
1229
- double y0, m, x0, r, xi, yi, wi;
1230
- size_t i;
1231
- struct fitting_xydata *xydata;
1232
- xydata = (struct fitting_xydata*) data;
1233
- x = xydata->x;
1234
- y = xydata->y;
1235
- w = xydata->w;
1236
- y0 = gsl_vector_get(v, 0);
1237
- m = gsl_vector_get(v, 1);
1238
- x0 = gsl_vector_get(v, 2);
1239
- r = gsl_vector_get(v, 3);
1240
- for (i = 0; i < x->size; i++) {
1241
- xi = gsl_vector_get(x, i);
1242
- if (w) wi = gsl_vector_get(w, i);
1243
- else wi = 1.0;
1244
- yi = gsl_vector_get(y, i);
1245
- gsl_vector_set(f, i, (m/(1.0+exp((x0-xi)/r)) + y0 - yi)*wi);
1246
- }
1247
- return GSL_SUCCESS;
1248
- }
1249
-
1250
- static int Sigmoid_df(const gsl_vector *v, void *data, gsl_matrix *J)
1251
- {
1252
- double m, x0, r, xi, wi, a, yy;
1253
- size_t i;
1254
- struct fitting_xydata *xydata;
1255
- gsl_vector *x, *w;
1256
- xydata = (struct fitting_xydata*) data;
1257
- x = xydata->x;
1258
- w = xydata->w;
1259
- m = gsl_vector_get(v, 1);
1260
- x0 = gsl_vector_get(v, 2);
1261
- r = gsl_vector_get(v, 3);
1262
- for (i = 0; i < x->size; i++) {
1263
- xi = gsl_vector_get(x, i);
1264
- if (w) wi = gsl_vector_get(w, i);
1265
- else wi = 1.0;
1266
- a = exp((x0 - xi)/r);
1267
- yy = 1.0 + a;
1268
- gsl_matrix_set(J, i, 0, wi);
1269
- gsl_matrix_set(J, i, 1, 1.0/yy*wi);
1270
- gsl_matrix_set(J, i, 2, -m*a/r/yy/yy*wi);
1271
- gsl_matrix_set(J, i, 3, m*a*(x0-xi)/r/r/yy/yy*wi);
1272
- }
1273
- return GSL_SUCCESS;
1274
- }
1275
-
1276
- static int Sigmoid_fdf(const gsl_vector *v, void *data,
1277
- gsl_vector *f, gsl_matrix *J)
1278
- {
1279
- Sigmoid_f(v, data, f);
1280
- Sigmoid_df(v, data, J);
1281
- return GSL_SUCCESS;
1282
- }
1283
-
1284
-
1285
- /* Power-law fit
1286
- y = y0 + A x^r
1287
- v[0] = y0
1288
- v[1] = A
1289
- v[2] = r
1290
- */
1291
- static int Power_f(const gsl_vector *v, void *data, gsl_vector *f)
1292
- {
1293
- gsl_vector *x, *y, *w;
1294
- double y0, A, r, xi, yi, wi;
1295
- size_t i;
1296
- struct fitting_xydata *xydata;
1297
- xydata = (struct fitting_xydata*) data;
1298
- x = xydata->x;
1299
- y = xydata->y;
1300
- w = xydata->w;
1301
- y0 = gsl_vector_get(v, 0);
1302
- A = gsl_vector_get(v, 1);
1303
- r = gsl_vector_get(v, 2);
1304
- for (i = 0; i < x->size; i++) {
1305
- xi = gsl_vector_get(x, i);
1306
- if (w) wi = gsl_vector_get(w, i);
1307
- else wi = 1.0;
1308
- yi = gsl_vector_get(y, i);
1309
- gsl_vector_set(f, i, (A*pow(xi, r) + y0 - yi)*wi);
1310
- }
1311
- return GSL_SUCCESS;
1312
- }
1313
-
1314
- static int Power_df(const gsl_vector *v, void *data, gsl_matrix *J)
1315
- {
1316
- double A, r, xi, wi, a;
1317
- size_t i;
1318
- struct fitting_xydata *xydata;
1319
- gsl_vector *x, *w;
1320
- xydata = (struct fitting_xydata*) data;
1321
- x = xydata->x;
1322
- w = xydata->w;
1323
- A = gsl_vector_get(v, 1);
1324
- r = gsl_vector_get(v, 2);
1325
- for (i = 0; i < x->size; i++) {
1326
- xi = gsl_vector_get(x, i);
1327
- if (w) wi = gsl_vector_get(w, i);
1328
- else wi = 1.0;
1329
- a = pow(xi, r);
1330
- gsl_matrix_set(J, i, 0, wi);
1331
- gsl_matrix_set(J, i, 1, a*wi);
1332
- gsl_matrix_set(J, i, 2, A*a*log(xi)*wi);
1333
-
1334
- }
1335
- return GSL_SUCCESS;
1336
- }
1337
-
1338
- static int Power_fdf(const gsl_vector *v, void *data,
1339
- gsl_vector *f, gsl_matrix *J)
1340
- {
1341
- Power_f(v, data, f);
1342
- Power_df(v, data, J);
1343
- return GSL_SUCCESS;
1344
- }
1345
-
1346
-
1347
- /* Lognormal fit
1348
- y = y0 + A exp[ -(log(x/x0)/width)^2 ]
1349
- v[0] = y0
1350
- v[1] = A
1351
- v[2] = x0
1352
- v[3] = width
1353
- */
1354
- static int Lognormal_f(const gsl_vector *v, void *data, gsl_vector *f)
1355
- {
1356
- gsl_vector *x, *y, *w;
1357
- double y0, A, x0, width, xi, yi, wi;
1358
- size_t i;
1359
- struct fitting_xydata *xydata;
1360
- xydata = (struct fitting_xydata*) data;
1361
- x = xydata->x;
1362
- y = xydata->y;
1363
- w = xydata->w;
1364
- y0 = gsl_vector_get(v, 0);
1365
- A = gsl_vector_get(v, 1);
1366
- x0 = gsl_vector_get(v, 2);
1367
- width = gsl_vector_get(v, 3);
1368
- for (i = 0; i < x->size; i++) {
1369
- xi = gsl_vector_get(x, i);
1370
- if (w) wi = gsl_vector_get(w, i);
1371
- else wi = 1.0;
1372
- yi = gsl_vector_get(y, i);
1373
- gsl_vector_set(f, i, (A*exp(-gsl_pow_2(log(xi/x0)/width)) + y0 - yi)*wi);
1374
- }
1375
- return GSL_SUCCESS;
1376
- }
1377
-
1378
- static int Lognormal_df(const gsl_vector *v, void *data, gsl_matrix *J)
1379
- {
1380
- double A, x0, width, xi, wi, a, b;
1381
- size_t i;
1382
- struct fitting_xydata *xydata;
1383
- gsl_vector *x, *w;
1384
- xydata = (struct fitting_xydata*) data;
1385
- x = xydata->x;
1386
- w = xydata->w;
1387
- A = gsl_vector_get(v, 1);
1388
- x0 = gsl_vector_get(v, 2);
1389
- width = gsl_vector_get(v, 3);
1390
- for (i = 0; i < x->size; i++) {
1391
- xi = gsl_vector_get(x, i);
1392
- if (w) wi = gsl_vector_get(w, i);
1393
- else wi = 1.0;
1394
- a = log(xi/x0)/width;
1395
- b = exp(-a*a);
1396
- gsl_matrix_set(J, i, 0, wi);
1397
- gsl_matrix_set(J, i, 1, b*wi);
1398
- gsl_matrix_set(J, i, 2, 2.0*A*b*a*a*a/width/x0*wi);
1399
- gsl_matrix_set(J, i, 3, 2.0*A*b*a*a*a*a/width*wi);
1400
- }
1401
- return GSL_SUCCESS;
1402
- }
1403
-
1404
- static int Lognormal_fdf(const gsl_vector *v, void *data,
1405
- gsl_vector *f, gsl_matrix *J)
1406
- {
1407
- Lognormal_f(v, data, f);
1408
- Lognormal_df(v, data, J);
1409
- return GSL_SUCCESS;
1410
- }
1411
-
1412
- /* Rayleigh fit
1413
- y = A exp(-x*x/2/var)
1414
- v[0] = A
1415
- v[1] = var = sigma^2
1416
- */
1417
- static int Rayleigh_f(const gsl_vector *v, void *data, gsl_vector *f)
1418
- {
1419
- gsl_vector *x, *y, *w;
1420
- double A, var, xi, yi, wi;
1421
- size_t i;
1422
- struct fitting_xydata *xydata;
1423
- xydata = (struct fitting_xydata*) data;
1424
- x = xydata->x;
1425
- y = xydata->y;
1426
- w = xydata->w;
1427
- var = gsl_vector_get(v, 1);
1428
- A = gsl_vector_get(v, 0);
1429
- for (i = 0; i < x->size; i++) {
1430
- xi = gsl_vector_get(x, i);
1431
- yi = gsl_vector_get(y, i);
1432
- if (w) wi = gsl_vector_get(w, i);
1433
- else wi = 1.0;
1434
- gsl_vector_set(f, i, (A*xi*exp(-xi*xi/var/2.0) - yi)*wi);
1435
- }
1436
- return GSL_SUCCESS;
1437
- }
1438
-
1439
- static int Rayleigh_df(const gsl_vector *v, void *data, gsl_matrix *J)
1440
- {
1441
- double A, var, xi, yy, wi;
1442
- size_t i;
1443
- struct fitting_xydata *xydata;
1444
- gsl_vector *x, *w;
1445
- xydata = (struct fitting_xydata*) data;
1446
- x = xydata->x;
1447
- w = xydata->w;
1448
- var = gsl_vector_get(v, 1);
1449
- A = gsl_vector_get(v, 0);
1450
- for (i = 0; i < x->size; i++) {
1451
- xi = gsl_vector_get(x, i);
1452
- if (w) wi = gsl_vector_get(w, i);
1453
- else wi = 1.0;
1454
- yy = xi*exp(-xi*xi/var/2.0);
1455
- gsl_matrix_set(J, i, 1, A*yy*xi*xi/2/var/var*wi);
1456
- gsl_matrix_set(J, i, 0, yy*wi);
1457
- }
1458
- return GSL_SUCCESS;
1459
- }
1460
-
1461
- static int Rayleigh_fdf(const gsl_vector *v, void *data,
1462
- gsl_vector *f, gsl_matrix *J)
1463
- {
1464
- Rayleigh_f(v, data, f);
1465
- Rayleigh_df(v, data, J);
1466
- return GSL_SUCCESS;
1467
- }
1468
-
1469
- static void set_fittype(gsl_multifit_function_fdf *f, const char *fittype, size_t *p, gsl_vector **v, int *flag)
1470
- {
1471
- if (str_tail_grep(fittype, "aussian_2peaks") == 0) {
1472
- f->f = Gaussian_2peaks_f;
1473
- f->df = Gaussian_2peaks_df;
1474
- f->fdf = Gaussian_2peaks_fdf;
1475
- *p = 7;
1476
- if (*v == NULL) {
1477
- *v = gsl_vector_alloc(*p);
1478
- gsl_vector_set(*v, 0, 0); /* y0 = 0 */
1479
- gsl_vector_set(*v, 1, 1); /* A = 1 */
1480
- gsl_vector_set(*v, 2, 0.0); /* x0 = 0 */
1481
- gsl_vector_set(*v, 3, 1); /* initial values, var = 1 */
1482
- gsl_vector_set(*v, 4, 1); /* A = 1 */
1483
- gsl_vector_set(*v, 5, 1.0); /* x0 = 1 */
1484
- gsl_vector_set(*v, 6, 1); /* initial values, var = 1 */
1485
- *flag = 1;
1486
- }
1487
- } else if (str_head_grep(fittype, "gaus") == 0) {
1488
- f->f = Gaussian_f;
1489
- f->df = Gaussian_df;
1490
- f->fdf = Gaussian_fdf;
1491
- *p = 4;
1492
- if (*v == NULL) {
1493
- *v = gsl_vector_alloc(*p);
1494
- gsl_vector_set(*v, 3, 1); /* initial values, var = 1 */
1495
- gsl_vector_set(*v, 2, 0.0); /* x0 = 0 */
1496
- gsl_vector_set(*v, 1, 1); /* A = 1 */
1497
- gsl_vector_set(*v, 0, 0); /* y0 = 0 */
1498
- *flag = 1;
1499
- }
1500
- } else if (str_head_grep(fittype, "exp") == 0) {
1501
- f->f = Exponential_f;
1502
- f->df = Exponential_df;
1503
- f->fdf = Exponential_fdf;
1504
- *p = 3;
1505
- if (*v == NULL) {
1506
- *v = gsl_vector_alloc(*p);
1507
- gsl_vector_set(*v, 0, 0); /* y0 = 0 */
1508
- gsl_vector_set(*v, 1, 1); /* A = 1 */
1509
- gsl_vector_set(*v, 2, 1);
1510
- *flag = 1;
1511
- }
1512
- } else if (str_head_grep(fittype, "rayleigh") == 0) {
1513
- f->f = Rayleigh_f;
1514
- f->df = Rayleigh_df;
1515
- f->fdf = Rayleigh_fdf;
1516
- *p = 2;
1517
- if (*v == NULL) {
1518
- *v = gsl_vector_alloc(*p);
1519
- gsl_vector_set(*v, 0, 1); /* A = 1 */
1520
- gsl_vector_set(*v, 1, 1); /* sigma = 1 */
1521
- *flag = 1;
1522
- }
1523
- } else if (str_head_grep(fittype, "dblexp") == 0) {
1524
- f->f = DblExponential_f;
1525
- f->df = DblExponential_df;
1526
- f->fdf = DblExponential_fdf;
1527
- *p = 5;
1528
- if (*v == NULL) {
1529
- *v = gsl_vector_alloc(*p);
1530
- gsl_vector_set(*v, 0, 0); /* y0 = 0 */
1531
- gsl_vector_set(*v, 1, 1); /* A = 1 */
1532
- gsl_vector_set(*v, 2, 1);
1533
- gsl_vector_set(*v, 3, 1); /* A = 1 */
1534
- gsl_vector_set(*v, 4, 1);
1535
- *flag = 1;
1536
- }
1537
- } else if (str_head_grep(fittype, "lor") == 0) {
1538
- f->f = Lorentzian_f;
1539
- f->df = Lorentzian_df;
1540
- f->fdf = Lorentzian_fdf;
1541
- *p = 4;
1542
- if (*v == NULL) {
1543
- *v = gsl_vector_alloc(*p);
1544
- gsl_vector_set(*v, 0, 0);
1545
- gsl_vector_set(*v, 1, 1);
1546
- gsl_vector_set(*v, 2, 0);
1547
- gsl_vector_set(*v, 3, 1);
1548
- *flag = 1;
1549
- }
1550
- } else if (str_head_grep(fittype, "sin") == 0) {
1551
- f->f = Sin_f;
1552
- f->df = Sin_df;
1553
- f->fdf = Sin_fdf;
1554
- *p = 4;
1555
- if (*v == NULL) {
1556
- *v = gsl_vector_alloc(*p);
1557
- gsl_vector_set(*v, 0, 0);
1558
- gsl_vector_set(*v, 1, 1);
1559
- gsl_vector_set(*v, 2, 1);
1560
- gsl_vector_set(*v, 3, 0);
1561
- *flag = 1;
1562
- }
1563
- } else if (str_head_grep(fittype, "hill") == 0) {
1564
- f->f = Hill_f;
1565
- f->df = Hill_df;
1566
- f->fdf = Hill_fdf;
1567
- *p = 4;
1568
- if (*v == NULL) {
1569
- *v = gsl_vector_alloc(*p);
1570
- gsl_vector_set(*v, 0, 0);
1571
- gsl_vector_set(*v, 1, 1);
1572
- gsl_vector_set(*v, 2, 1);
1573
- gsl_vector_set(*v, 3, 1);
1574
- *flag = 1;
1575
- }
1576
- } else if (str_head_grep(fittype, "sigmoid") == 0 || str_head_grep(fittype, "fermi") == 0) {
1577
- f->f = Sigmoid_f;
1578
- f->df = Sigmoid_df;
1579
- f->fdf = Sigmoid_fdf;
1580
- *p = 4;
1581
- if (*v == NULL) {
1582
- *v = gsl_vector_alloc(*p);
1583
- gsl_vector_set(*v, 0, 0);
1584
- gsl_vector_set(*v, 1, 1);
1585
- gsl_vector_set(*v, 2, 0);
1586
- gsl_vector_set(*v, 3, 1);
1587
- *flag = 1;
1588
- }
1589
- } else if (str_head_grep(fittype, "power") == 0) {
1590
- f->f = Power_f;
1591
- f->df = Power_df;
1592
- f->fdf = Power_fdf;
1593
- *p = 3;
1594
- if (*v == NULL) {
1595
- *v = gsl_vector_alloc(*p);
1596
- gsl_vector_set(*v, 0, 0);
1597
- gsl_vector_set(*v, 1, 1);
1598
- gsl_vector_set(*v, 2, -1);
1599
- *flag = 1;
1600
- }
1601
- } else if (str_head_grep(fittype, "lognormal") == 0) {
1602
- f->f = Lognormal_f;
1603
- f->df = Lognormal_df;
1604
- f->fdf = Lognormal_fdf;
1605
- *p = 4;
1606
- if (*v == NULL) {
1607
- *v = gsl_vector_alloc(*p);
1608
- gsl_vector_set(*v, 0, 0);
1609
- gsl_vector_set(*v, 1, 1);
1610
- gsl_vector_set(*v, 2, 1);
1611
- gsl_vector_set(*v, 3, 1);
1612
- *flag = 1;
1613
- }
1614
- } else {
1615
- rb_raise(rb_eRuntimeError, "Unknown fit type (gaussian expected)");
1616
- }
1617
- }
1618
-
1619
- /* Singleton method */
1620
- static VALUE rb_gsl_multifit_fit(int argc, VALUE *argv, VALUE klass)
1621
- {
1622
- const gsl_multifit_fdfsolver_type *T;
1623
- gsl_multifit_fdfsolver *solver;
1624
- int status;
1625
- size_t iter = 0, i;
1626
- size_t n, dof; /* # of data points */
1627
- size_t p; /* # of fitting parameters */
1628
- gsl_multifit_function_fdf f;
1629
- gsl_matrix *covar = NULL;
1630
- gsl_vector *v = NULL;
1631
- gsl_vector *x, *y, *w = NULL;
1632
- gsl_vector_view xx, yy, ww;
1633
- gsl_vector *vout, *verr;
1634
- int flag = 0;
1635
- double chi2;
1636
- char fittype[256];
1637
- struct fitting_xydata xydata;
1638
- if (argc < 3) rb_raise(rb_eArgError, "too few arguments");
1639
- switch (TYPE(argv[argc-1])) {
1640
- case T_ARRAY:
1641
- v = get_vector(argv[argc-1]);
1642
- flag = 1;
1643
- argc--;
1644
- break;
1645
- case T_STRING:
1646
- /* do nothing */
1647
- break;
1648
- default:
1649
- Data_Get_Vector(argv[argc-1], v);
1650
- flag = 0;
1651
- argc--;
1652
- break;
1653
- }
1654
- x = &xx.vector;
1655
- y = &yy.vector;
1656
- w = &ww.vector;
1657
- switch (argc) {
1658
- case 3:
1659
- Data_Get_Vector(argv[0], x);
1660
- Data_Get_Vector(argv[1], y);
1661
- w = NULL;
1662
- strcpy(fittype, STR2CSTR(argv[2]));
1663
- break;
1664
- case 4:
1665
- Data_Get_Vector(argv[0], x);
1666
- Data_Get_Vector(argv[1], w);
1667
- Data_Get_Vector(argv[2], y);
1668
- strcpy(fittype, STR2CSTR(argv[3]));
1669
- break;
1670
- default:
1671
- rb_raise(rb_eArgError, "wrong number of arguments");
1672
- break;
1673
- }
1674
-
1675
- xydata.x = x;
1676
- xydata.y = y;
1677
- xydata.w = w;
1678
- n = x->size;
1679
-
1680
- set_fittype(&f, fittype, &p, &v, &flag);
1681
-
1682
- f.n = n;
1683
- f.p = p;
1684
- f.params = &xydata;
1685
-
1686
- T = gsl_multifit_fdfsolver_lmsder;
1687
- solver = gsl_multifit_fdfsolver_alloc(T, n, p);
1688
- gsl_multifit_fdfsolver_set(solver, &f, v);
1689
-
1690
- do {
1691
- iter++;
1692
- status = gsl_multifit_fdfsolver_iterate(solver);
1693
- if (status) break;
1694
- status = gsl_multifit_test_delta(solver->dx, solver->x, 1e-6, 1e-6);
1695
- } while (status == GSL_CONTINUE);
1696
- vout = gsl_vector_alloc(p);
1697
- verr = gsl_vector_alloc(p);
1698
- gsl_vector_memcpy(vout, solver->x);
1699
- covar = gsl_matrix_alloc(p, p);
1700
- chi2 = gsl_pow_2(gsl_blas_dnrm2(solver->f)); /* not reduced chi-square */
1701
- dof = n - p;
1702
- gsl_multifit_covar(solver->J, 0.0, covar);
1703
- for (i = 0; i < p; i++)
1704
- gsl_vector_set(verr, i, sqrt(chi2/dof*gsl_matrix_get(covar, i, i)));
1705
- gsl_matrix_free(covar);
1706
- if (flag == 1) gsl_vector_free(v);
1707
- gsl_multifit_fdfsolver_free(solver);
1708
- return rb_ary_new3(4,
1709
- Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, vout),
1710
- Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, verr),
1711
- rb_float_new(chi2), INT2FIX(dof));
1712
- }
1713
-
1714
- static VALUE rb_gsl_multifit_linear_est(VALUE module, VALUE xx, VALUE cc, VALUE ccov)
1715
- {
1716
- gsl_vector *x, *c;
1717
- gsl_matrix *cov;
1718
- double y, y_err;
1719
-
1720
- Data_Get_Vector(xx, x);
1721
- Data_Get_Vector(cc, c);
1722
- Data_Get_Matrix(ccov, cov);
1723
- gsl_multifit_linear_est(x, c, cov, &y, &y_err);
1724
- return rb_ary_new3(2, rb_float_new(y), rb_float_new(y_err));
1725
- }
1726
-
1727
- static VALUE rb_gsl_multifit_linear_residuals(int argc, VALUE argv[], VALUE module)
1728
- {
1729
- gsl_vector *y, *c, *r;
1730
- gsl_matrix *X;
1731
- VALUE ret;
1732
- switch (argc) {
1733
- case 3:
1734
- Data_Get_Matrix(argv[0], X);
1735
- Data_Get_Vector(argv[1], y);
1736
- Data_Get_Vector(argv[2], c);
1737
- r = gsl_vector_alloc(y->size);
1738
- ret = Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, r);
1739
- break;
1740
- case 4:
1741
- Data_Get_Matrix(argv[0], X);
1742
- Data_Get_Vector(argv[1], y);
1743
- Data_Get_Vector(argv[2], c);
1744
- Data_Get_Vector(argv[3], r);
1745
- ret = argv[3];
1746
- break;
1747
- default:
1748
- rb_raise(rb_eArgError, "Wrong number of arguments %d (3 or 4).\n", argc);
1749
- }
1750
- gsl_multifit_linear_residuals(X, y, c, r);
1751
- return ret;
1752
- }
1753
-
1754
- void Init_gsl_multifit(VALUE module)
1755
- {
1756
- VALUE mgsl_multifit;
1757
- VALUE cgsl_multifit_fdfsolver;
1758
- VALUE cgsl_multifit_solver;
1759
-
1760
- mgsl_multifit = rb_define_module_under(module, "MultiFit");
1761
-
1762
- cgsl_multifit_workspace = rb_define_class_under(mgsl_multifit, "Workspace",
1763
- cGSL_Object);
1764
- rb_define_singleton_method(cgsl_multifit_workspace, "new",
1765
- rb_gsl_multifit_workspace_new, 2);
1766
- rb_define_singleton_method(cgsl_multifit_workspace, "alloc",
1767
- rb_gsl_multifit_workspace_new, 2);
1768
- rb_define_singleton_method(mgsl_multifit, "alloc",
1769
- rb_gsl_multifit_workspace_new, 2);
1770
- rb_define_module_function(mgsl_multifit, "linear", rb_gsl_multifit_linear, -1);
1771
- rb_define_module_function(mgsl_multifit, "wlinear", rb_gsl_multifit_wlinear, -1);
1772
-
1773
- cgsl_multifit_solver = rb_define_class_under(mgsl_multifit, "Solver", cGSL_Object);
1774
- cgsl_multifit_fdfsolver = rb_define_class_under(mgsl_multifit, "FdfSolver",
1775
- cgsl_multifit_solver);
1776
- cgsl_multifit_function_fdf = rb_define_class_under(mgsl_multifit, "Function_fdf",
1777
- cGSL_Object);
1778
-
1779
- /*****/
1780
-
1781
- rb_define_singleton_method(cgsl_multifit_fdfsolver, "new",
1782
- rb_gsl_multifit_fdfsolver_new, -1);
1783
- rb_define_singleton_method(cgsl_multifit_fdfsolver, "alloc",
1784
- rb_gsl_multifit_fdfsolver_new, -1);
1785
-
1786
- rb_define_singleton_method(cgsl_multifit_function_fdf, "new",
1787
- rb_gsl_multifit_function_fdf_new, -1);
1788
- rb_define_singleton_method(cgsl_multifit_function_fdf, "alloc",
1789
- rb_gsl_multifit_function_fdf_new, -1);
1790
-
1791
- /*****/
1792
-
1793
- rb_define_method(cgsl_multifit_fdfsolver, "set", rb_gsl_multifit_fdfsolver_set, 2);
1794
- rb_define_method(cgsl_multifit_fdfsolver, "name", rb_gsl_multifit_fdfsolver_name, 0);
1795
- rb_define_method(cgsl_multifit_fdfsolver, "iterate", rb_gsl_multifit_fdfsolver_iterate, 0);
1796
- rb_define_method(cgsl_multifit_fdfsolver, "position", rb_gsl_multifit_fdfsolver_position, 0);
1797
- // rb_define_alias(cgsl_multifit_fdfsolver, "x", "position");
1798
- rb_define_method(cgsl_multifit_fdfsolver, "print_state", rb_gsl_multifit_fdfsolver_print_state, 1);
1799
- rb_define_method(cgsl_multifit_fdfsolver, "fdf", rb_gsl_multifit_fdfsolver_fdf, 0);
1800
- rb_define_method(cgsl_multifit_fdfsolver, "test_delta", rb_gsl_multifit_fdfsolver_test_delta, 2);
1801
- rb_define_method(cgsl_multifit_fdfsolver, "test_gradient", rb_gsl_multifit_fdfsolver_test_gradient, -1);
1802
- rb_define_method(cgsl_multifit_fdfsolver, "covar", rb_gsl_multifit_fdfsolver_covar, -1);
1803
- rb_define_method(cgsl_multifit_fdfsolver, "gradient", rb_gsl_multifit_fdfsolver_gradient, -1);
1804
- rb_define_method(cgsl_multifit_fdfsolver, "x", rb_gsl_multifit_fdfsolver_x, 0);
1805
- rb_define_method(cgsl_multifit_fdfsolver, "dx", rb_gsl_multifit_fdfsolver_dx, 0);
1806
- rb_define_method(cgsl_multifit_fdfsolver, "f", rb_gsl_multifit_fdfsolver_f, 0);
1807
- rb_define_method(cgsl_multifit_fdfsolver, "J", rb_gsl_multifit_fdfsolver_J, 0);
1808
- rb_define_alias(cgsl_multifit_fdfsolver, "jac", "J");
1809
- rb_define_alias(cgsl_multifit_fdfsolver, "jacobian", "J");
1810
- rb_define_alias(cgsl_multifit_fdfsolver, "Jacobian", "J");
1811
-
1812
- /*****/
1813
- rb_define_module_function(mgsl_multifit, "polyfit", rb_gsl_multifit_polyfit, -1);
1814
- rb_define_module_function(mgsl_multifit, "legfit", rb_gsl_multifit_legfit, -1);
1815
- /*****/
1816
-
1817
- rb_define_singleton_method(mgsl_multifit, "test_delta", rb_gsl_multifit_test_delta, 4);
1818
- rb_define_singleton_method(mgsl_multifit, "test_gradient", rb_gsl_multifit_test_gradient, 2);
1819
- rb_define_singleton_method(mgsl_multifit, "gradient", rb_gsl_multifit_gradient, -1);
1820
- rb_define_singleton_method(mgsl_multifit, "covar", rb_gsl_multifit_covar, -1);
1821
-
1822
- rb_gsl_multifit_define_const(cgsl_multifit_fdfsolver);
1823
-
1824
- rb_define_method(cgsl_multifit_function_fdf, "set_procs",
1825
- rb_gsl_multifit_function_fdf_set_procs, -1);
1826
- rb_define_method(cgsl_multifit_function_fdf, "set_data",
1827
- rb_gsl_multifit_function_fdf_set_data, -1);
1828
- rb_define_method(cgsl_multifit_function_fdf, "params",
1829
- rb_gsl_multifit_function_fdf_params, 0);
1830
- rb_define_alias(cgsl_multifit_function_fdf, "param", "params");
1831
-
1832
- rb_define_method(cgsl_multifit_function_fdf, "n",
1833
- rb_gsl_multifit_function_fdf_n, 0);
1834
- rb_define_method(cgsl_multifit_function_fdf, "set_n",
1835
- rb_gsl_multifit_function_fdf_set_n, 1);
1836
- rb_define_alias(cgsl_multifit_function_fdf, "n=", "set_n");
1837
- rb_define_method(cgsl_multifit_function_fdf, "p",
1838
- rb_gsl_multifit_function_fdf_p, 0);
1839
- rb_define_alias(cgsl_multifit_function_fdf, "np", "p");
1840
-
1841
- /*****/
1842
- rb_define_singleton_method(cgsl_multifit_fdfsolver, "fit", rb_gsl_multifit_fit, -1);
1843
-
1844
- /***/
1845
- rb_define_module_function(mgsl_multifit, "linear_est", rb_gsl_multifit_linear_est, 3);
1846
- rb_define_module_function(module, "multifit_linear_est", rb_gsl_multifit_linear_est, 3);
1847
-
1848
- rb_define_module_function(mgsl_multifit, "linear_residuals", rb_gsl_multifit_linear_residuals, -1);
1849
- rb_define_module_function(module, "multifit_linear_residuals", rb_gsl_multifit_linear_residuals, -1);
1850
-
1851
- #ifdef HAVE_NDLINEAR_GSL_MULTIFIT_NDLINEAR_H
1852
- Init_ndlinear(mgsl_multifit);
1853
- #endif
1854
-
1855
- }
1856
-
1857
- #ifdef CHECK_WORKSPACE
1858
- #undef CHECK_WORKSPACE
1859
- #endif
1860
- #ifdef CHECK_MULTIFIT_FUNCTION_FDF
1861
- #undef CHECK_MULTIFIT_FUNCTION_FDF
1862
- #endif