rb-gsl 1.16.0.5 → 1.16.0.6

Sign up to get free protection for your applications and to get access to all the features.
Files changed (612) hide show
  1. checksums.yaml +4 -4
  2. data/rb-gsl.gemspec +5 -10
  3. metadata +10 -713
  4. data/.gitignore +0 -12
  5. data/.travis.yml +0 -24
  6. data/AUTHORS +0 -12
  7. data/COPYING +0 -341
  8. data/ChangeLog +0 -621
  9. data/Gemfile +0 -4
  10. data/README.md +0 -77
  11. data/Rakefile +0 -20
  12. data/THANKS +0 -17
  13. data/examples/alf/alf.gp +0 -15
  14. data/examples/alf/alf.rb +0 -32
  15. data/examples/blas/blas.rb +0 -13
  16. data/examples/blas/dnrm2.rb +0 -16
  17. data/examples/blas/level1.rb +0 -81
  18. data/examples/blas/level2.rb +0 -11
  19. data/examples/blas/level3.rb +0 -12
  20. data/examples/bspline.rb +0 -57
  21. data/examples/cdf.rb +0 -16
  22. data/examples/cheb.rb +0 -21
  23. data/examples/combination.rb +0 -23
  24. data/examples/complex/RC-lpf.rb +0 -47
  25. data/examples/complex/add.rb +0 -36
  26. data/examples/complex/coerce.rb +0 -14
  27. data/examples/complex/complex.rb +0 -25
  28. data/examples/complex/fpmi.rb +0 -70
  29. data/examples/complex/functions.rb +0 -77
  30. data/examples/complex/michelson.rb +0 -36
  31. data/examples/complex/mul.rb +0 -28
  32. data/examples/complex/oscillator.rb +0 -17
  33. data/examples/complex/set.rb +0 -37
  34. data/examples/const/physconst.rb +0 -151
  35. data/examples/const/travel.rb +0 -45
  36. data/examples/deriv/demo.rb +0 -13
  37. data/examples/deriv/deriv.rb +0 -36
  38. data/examples/deriv/diff.rb +0 -35
  39. data/examples/dht.rb +0 -42
  40. data/examples/dirac.rb +0 -56
  41. data/examples/eigen/eigen.rb +0 -34
  42. data/examples/eigen/herm.rb +0 -22
  43. data/examples/eigen/narray.rb +0 -9
  44. data/examples/eigen/nonsymm.rb +0 -37
  45. data/examples/eigen/nonsymmv.rb +0 -43
  46. data/examples/eigen/qhoscillator.gp +0 -35
  47. data/examples/eigen/qhoscillator.rb +0 -90
  48. data/examples/eigen/vander.rb +0 -41
  49. data/examples/fft/fft.rb +0 -17
  50. data/examples/fft/fft2.rb +0 -17
  51. data/examples/fft/forward.rb +0 -25
  52. data/examples/fft/forward2.rb +0 -26
  53. data/examples/fft/radix2.rb +0 -18
  54. data/examples/fft/real-halfcomplex.rb +0 -33
  55. data/examples/fft/real-halfcomplex2.rb +0 -30
  56. data/examples/fft/realradix2.rb +0 -19
  57. data/examples/fft/sunspot.dat +0 -256
  58. data/examples/fft/sunspot.rb +0 -16
  59. data/examples/fit/expdata.dat +0 -20
  60. data/examples/fit/expfit.rb +0 -31
  61. data/examples/fit/gaussfit.rb +0 -29
  62. data/examples/fit/gaussian_2peaks.rb +0 -34
  63. data/examples/fit/hillfit.rb +0 -40
  64. data/examples/fit/lognormal.rb +0 -26
  65. data/examples/fit/lorentzfit.rb +0 -22
  66. data/examples/fit/multifit.rb +0 -72
  67. data/examples/fit/ndlinear.rb +0 -133
  68. data/examples/fit/nonlinearfit.rb +0 -89
  69. data/examples/fit/plot.gp +0 -36
  70. data/examples/fit/polyfit.rb +0 -9
  71. data/examples/fit/powerfit.rb +0 -21
  72. data/examples/fit/sigmoidfit.rb +0 -40
  73. data/examples/fit/sinfit.rb +0 -22
  74. data/examples/fit/wlinear.rb +0 -46
  75. data/examples/fresnel.rb +0 -11
  76. data/examples/function/function.rb +0 -36
  77. data/examples/function/log.rb +0 -7
  78. data/examples/function/min.rb +0 -33
  79. data/examples/function/sin.rb +0 -10
  80. data/examples/function/synchrotron.rb +0 -18
  81. data/examples/gallery/butterfly.rb +0 -7
  82. data/examples/gallery/cayley.rb +0 -12
  83. data/examples/gallery/cornu.rb +0 -23
  84. data/examples/gallery/eight.rb +0 -11
  85. data/examples/gallery/koch.rb +0 -40
  86. data/examples/gallery/lemniscate.rb +0 -11
  87. data/examples/gallery/polar.rb +0 -11
  88. data/examples/gallery/rgplot/cossin.rb +0 -35
  89. data/examples/gallery/rgplot/rgplot.replaced +0 -0
  90. data/examples/gallery/rgplot/roesller.rb +0 -55
  91. data/examples/gallery/roesller.rb +0 -39
  92. data/examples/gallery/scarabaeus.rb +0 -14
  93. data/examples/histogram/cauchy.rb +0 -27
  94. data/examples/histogram/cauchy.sh +0 -2
  95. data/examples/histogram/exponential.rb +0 -19
  96. data/examples/histogram/gauss.rb +0 -16
  97. data/examples/histogram/gsl-histogram.rb +0 -40
  98. data/examples/histogram/histo2d.rb +0 -31
  99. data/examples/histogram/histo3d.rb +0 -34
  100. data/examples/histogram/histogram-pdf.rb +0 -27
  101. data/examples/histogram/histogram.rb +0 -26
  102. data/examples/histogram/integral.rb +0 -28
  103. data/examples/histogram/poisson.rb +0 -27
  104. data/examples/histogram/power.rb +0 -25
  105. data/examples/histogram/rebin.rb +0 -17
  106. data/examples/histogram/smp.dat +0 -5
  107. data/examples/histogram/xexp.rb +0 -21
  108. data/examples/integration/ahmed.rb +0 -21
  109. data/examples/integration/cosmology.rb +0 -75
  110. data/examples/integration/friedmann.gp +0 -16
  111. data/examples/integration/friedmann.rb +0 -35
  112. data/examples/integration/gamma-zeta.rb +0 -35
  113. data/examples/integration/integration.rb +0 -22
  114. data/examples/integration/qag.rb +0 -8
  115. data/examples/integration/qag2.rb +0 -14
  116. data/examples/integration/qag3.rb +0 -8
  117. data/examples/integration/qagi.rb +0 -28
  118. data/examples/integration/qagi2.rb +0 -49
  119. data/examples/integration/qagiu.rb +0 -29
  120. data/examples/integration/qagp.rb +0 -20
  121. data/examples/integration/qags.rb +0 -14
  122. data/examples/integration/qawc.rb +0 -18
  123. data/examples/integration/qawf.rb +0 -41
  124. data/examples/integration/qawo.rb +0 -29
  125. data/examples/integration/qaws.rb +0 -30
  126. data/examples/integration/qng.rb +0 -17
  127. data/examples/interp/demo.gp +0 -20
  128. data/examples/interp/demo.rb +0 -45
  129. data/examples/interp/interp.rb +0 -37
  130. data/examples/interp/points +0 -10
  131. data/examples/interp/spline.rb +0 -20
  132. data/examples/jacobi/deriv.rb +0 -40
  133. data/examples/jacobi/integrate.rb +0 -34
  134. data/examples/jacobi/interp.rb +0 -43
  135. data/examples/jacobi/jacobi.rb +0 -11
  136. data/examples/linalg/HH.rb +0 -15
  137. data/examples/linalg/HH_narray.rb +0 -13
  138. data/examples/linalg/LQ_solve.rb +0 -73
  139. data/examples/linalg/LU.rb +0 -84
  140. data/examples/linalg/LU2.rb +0 -31
  141. data/examples/linalg/LU_narray.rb +0 -24
  142. data/examples/linalg/PTLQ.rb +0 -47
  143. data/examples/linalg/QR.rb +0 -18
  144. data/examples/linalg/QRPT.rb +0 -47
  145. data/examples/linalg/QR_solve.rb +0 -78
  146. data/examples/linalg/QR_solve_narray.rb +0 -13
  147. data/examples/linalg/SV.rb +0 -16
  148. data/examples/linalg/SV_narray.rb +0 -12
  149. data/examples/linalg/SV_solve.rb +0 -49
  150. data/examples/linalg/chol.rb +0 -29
  151. data/examples/linalg/chol_narray.rb +0 -15
  152. data/examples/linalg/complex.rb +0 -57
  153. data/examples/linalg/invert_narray.rb +0 -10
  154. data/examples/math/const.rb +0 -67
  155. data/examples/math/elementary.rb +0 -35
  156. data/examples/math/functions.rb +0 -41
  157. data/examples/math/inf_nan.rb +0 -34
  158. data/examples/math/minmax.rb +0 -22
  159. data/examples/math/power.rb +0 -18
  160. data/examples/math/test.rb +0 -31
  161. data/examples/matrix/a.dat +0 -0
  162. data/examples/matrix/add.rb +0 -45
  163. data/examples/matrix/b.dat +0 -4
  164. data/examples/matrix/cat.rb +0 -31
  165. data/examples/matrix/colvectors.rb +0 -24
  166. data/examples/matrix/complex.rb +0 -41
  167. data/examples/matrix/det.rb +0 -29
  168. data/examples/matrix/diagonal.rb +0 -23
  169. data/examples/matrix/get_all.rb +0 -159
  170. data/examples/matrix/hilbert.rb +0 -31
  171. data/examples/matrix/iterator.rb +0 -19
  172. data/examples/matrix/matrix.rb +0 -57
  173. data/examples/matrix/minmax.rb +0 -53
  174. data/examples/matrix/mul.rb +0 -39
  175. data/examples/matrix/rand.rb +0 -20
  176. data/examples/matrix/read.rb +0 -29
  177. data/examples/matrix/rowcol.rb +0 -47
  178. data/examples/matrix/set.rb +0 -41
  179. data/examples/matrix/set_all.rb +0 -100
  180. data/examples/matrix/view.rb +0 -32
  181. data/examples/matrix/view_all.rb +0 -148
  182. data/examples/matrix/write.rb +0 -23
  183. data/examples/min.rb +0 -29
  184. data/examples/monte/miser.rb +0 -47
  185. data/examples/monte/monte.rb +0 -47
  186. data/examples/monte/plain.rb +0 -47
  187. data/examples/monte/vegas.rb +0 -46
  188. data/examples/multimin/bundle.rb +0 -66
  189. data/examples/multimin/cqp.rb +0 -109
  190. data/examples/multimin/fdfminimizer.rb +0 -40
  191. data/examples/multimin/fminimizer.rb +0 -41
  192. data/examples/multiroot/demo.rb +0 -36
  193. data/examples/multiroot/fdfsolver.rb +0 -50
  194. data/examples/multiroot/fsolver.rb +0 -33
  195. data/examples/multiroot/fsolver2.rb +0 -32
  196. data/examples/multiroot/fsolver3.rb +0 -26
  197. data/examples/narray/histogram.rb +0 -14
  198. data/examples/narray/mandel.rb +0 -27
  199. data/examples/narray/narray.rb +0 -28
  200. data/examples/narray/narray2.rb +0 -44
  201. data/examples/narray/sf.rb +0 -26
  202. data/examples/ntuple/create.rb +0 -17
  203. data/examples/ntuple/project.rb +0 -31
  204. data/examples/odeiv/binarysystem.gp +0 -23
  205. data/examples/odeiv/binarysystem.rb +0 -104
  206. data/examples/odeiv/demo.gp +0 -24
  207. data/examples/odeiv/demo.rb +0 -69
  208. data/examples/odeiv/demo2.gp +0 -26
  209. data/examples/odeiv/duffing.rb +0 -45
  210. data/examples/odeiv/frei1.rb +0 -109
  211. data/examples/odeiv/frei2.rb +0 -76
  212. data/examples/odeiv/legendre.rb +0 -52
  213. data/examples/odeiv/odeiv.rb +0 -32
  214. data/examples/odeiv/odeiv2.rb +0 -45
  215. data/examples/odeiv/oscillator.rb +0 -42
  216. data/examples/odeiv/sedov.rb +0 -97
  217. data/examples/odeiv/whitedwarf.gp +0 -40
  218. data/examples/odeiv/whitedwarf.rb +0 -158
  219. data/examples/ool/conmin.rb +0 -100
  220. data/examples/ool/gencan.rb +0 -99
  221. data/examples/ool/pgrad.rb +0 -100
  222. data/examples/ool/spg.rb +0 -100
  223. data/examples/pdf/bernoulli.rb +0 -5
  224. data/examples/pdf/beta.rb +0 -7
  225. data/examples/pdf/binomiral.rb +0 -10
  226. data/examples/pdf/cauchy.rb +0 -6
  227. data/examples/pdf/chisq.rb +0 -8
  228. data/examples/pdf/exponential.rb +0 -7
  229. data/examples/pdf/exppow.rb +0 -6
  230. data/examples/pdf/fdist.rb +0 -7
  231. data/examples/pdf/flat.rb +0 -7
  232. data/examples/pdf/gamma.rb +0 -8
  233. data/examples/pdf/gauss-tail.rb +0 -5
  234. data/examples/pdf/gauss.rb +0 -6
  235. data/examples/pdf/geometric.rb +0 -5
  236. data/examples/pdf/gumbel.rb +0 -6
  237. data/examples/pdf/hypergeometric.rb +0 -11
  238. data/examples/pdf/landau.rb +0 -5
  239. data/examples/pdf/laplace.rb +0 -7
  240. data/examples/pdf/logarithmic.rb +0 -5
  241. data/examples/pdf/logistic.rb +0 -6
  242. data/examples/pdf/lognormal.rb +0 -6
  243. data/examples/pdf/neg-binomiral.rb +0 -10
  244. data/examples/pdf/pareto.rb +0 -7
  245. data/examples/pdf/pascal.rb +0 -10
  246. data/examples/pdf/poisson.rb +0 -5
  247. data/examples/pdf/rayleigh-tail.rb +0 -6
  248. data/examples/pdf/rayleigh.rb +0 -6
  249. data/examples/pdf/tdist.rb +0 -6
  250. data/examples/pdf/weibull.rb +0 -8
  251. data/examples/permutation/ex1.rb +0 -22
  252. data/examples/permutation/permutation.rb +0 -16
  253. data/examples/poly/bell.rb +0 -6
  254. data/examples/poly/bessel.rb +0 -6
  255. data/examples/poly/cheb.rb +0 -6
  256. data/examples/poly/cheb_II.rb +0 -6
  257. data/examples/poly/cubic.rb +0 -9
  258. data/examples/poly/demo.rb +0 -20
  259. data/examples/poly/eval.rb +0 -28
  260. data/examples/poly/eval_derivs.rb +0 -14
  261. data/examples/poly/fit.rb +0 -21
  262. data/examples/poly/hermite.rb +0 -6
  263. data/examples/poly/poly.rb +0 -13
  264. data/examples/poly/quadratic.rb +0 -25
  265. data/examples/random/diffusion.rb +0 -34
  266. data/examples/random/gaussian.rb +0 -9
  267. data/examples/random/generator.rb +0 -27
  268. data/examples/random/hdsobol.rb +0 -21
  269. data/examples/random/poisson.rb +0 -9
  270. data/examples/random/qrng.rb +0 -19
  271. data/examples/random/randomwalk.rb +0 -37
  272. data/examples/random/randomwalk2d.rb +0 -19
  273. data/examples/random/rayleigh.rb +0 -36
  274. data/examples/random/rng.rb +0 -33
  275. data/examples/random/rngextra.rb +0 -14
  276. data/examples/roots/bisection.rb +0 -25
  277. data/examples/roots/brent.rb +0 -43
  278. data/examples/roots/demo.rb +0 -30
  279. data/examples/roots/newton.rb +0 -46
  280. data/examples/roots/recombination.gp +0 -11
  281. data/examples/roots/recombination.rb +0 -61
  282. data/examples/roots/steffenson.rb +0 -48
  283. data/examples/sf/ShiChi.rb +0 -6
  284. data/examples/sf/SiCi.rb +0 -6
  285. data/examples/sf/airy_Ai.rb +0 -8
  286. data/examples/sf/airy_Bi.rb +0 -8
  287. data/examples/sf/bessel_IK.rb +0 -12
  288. data/examples/sf/bessel_JY.rb +0 -13
  289. data/examples/sf/beta_inc.rb +0 -9
  290. data/examples/sf/clausen.rb +0 -6
  291. data/examples/sf/dawson.rb +0 -5
  292. data/examples/sf/debye.rb +0 -9
  293. data/examples/sf/dilog.rb +0 -6
  294. data/examples/sf/ellint.rb +0 -6
  295. data/examples/sf/expint.rb +0 -8
  296. data/examples/sf/fermi.rb +0 -10
  297. data/examples/sf/gamma_inc_P.rb +0 -9
  298. data/examples/sf/gegenbauer.rb +0 -8
  299. data/examples/sf/hyperg.rb +0 -7
  300. data/examples/sf/laguerre.rb +0 -19
  301. data/examples/sf/lambertW.rb +0 -5
  302. data/examples/sf/legendre_P.rb +0 -10
  303. data/examples/sf/lngamma.rb +0 -5
  304. data/examples/sf/psi.rb +0 -54
  305. data/examples/sf/sphbessel.gp +0 -27
  306. data/examples/sf/sphbessel.rb +0 -30
  307. data/examples/sf/synchrotron.rb +0 -5
  308. data/examples/sf/transport.rb +0 -10
  309. data/examples/sf/zetam1.rb +0 -5
  310. data/examples/siman.rb +0 -44
  311. data/examples/sort/heapsort.rb +0 -23
  312. data/examples/sort/heapsort_vector_complex.rb +0 -21
  313. data/examples/sort/sort.rb +0 -23
  314. data/examples/sort/sort2.rb +0 -16
  315. data/examples/stats/mean.rb +0 -17
  316. data/examples/stats/statistics.rb +0 -18
  317. data/examples/stats/test.rb +0 -9
  318. data/examples/sum.rb +0 -34
  319. data/examples/tamu_anova.rb +0 -18
  320. data/examples/vector/a.dat +0 -0
  321. data/examples/vector/add.rb +0 -56
  322. data/examples/vector/b.dat +0 -4
  323. data/examples/vector/c.dat +0 -3
  324. data/examples/vector/collect.rb +0 -26
  325. data/examples/vector/compare.rb +0 -28
  326. data/examples/vector/complex.rb +0 -51
  327. data/examples/vector/complex_get_all.rb +0 -85
  328. data/examples/vector/complex_set_all.rb +0 -131
  329. data/examples/vector/complex_view_all.rb +0 -77
  330. data/examples/vector/connect.rb +0 -22
  331. data/examples/vector/decimate.rb +0 -38
  332. data/examples/vector/diff.rb +0 -31
  333. data/examples/vector/filescan.rb +0 -17
  334. data/examples/vector/floor.rb +0 -23
  335. data/examples/vector/get_all.rb +0 -82
  336. data/examples/vector/gnuplot.rb +0 -38
  337. data/examples/vector/graph.rb +0 -28
  338. data/examples/vector/histogram.rb +0 -22
  339. data/examples/vector/linspace.rb +0 -24
  340. data/examples/vector/log.rb +0 -17
  341. data/examples/vector/logic.rb +0 -33
  342. data/examples/vector/logspace.rb +0 -25
  343. data/examples/vector/minmax.rb +0 -47
  344. data/examples/vector/mul.rb +0 -49
  345. data/examples/vector/narray.rb +0 -46
  346. data/examples/vector/read.rb +0 -29
  347. data/examples/vector/set.rb +0 -35
  348. data/examples/vector/set_all.rb +0 -121
  349. data/examples/vector/smpv.dat +0 -15
  350. data/examples/vector/test.rb +0 -43
  351. data/examples/vector/test_gslblock.rb +0 -58
  352. data/examples/vector/vector.rb +0 -110
  353. data/examples/vector/view.rb +0 -35
  354. data/examples/vector/view_all.rb +0 -73
  355. data/examples/vector/where.rb +0 -29
  356. data/examples/vector/write.rb +0 -24
  357. data/examples/vector/zip.rb +0 -34
  358. data/examples/wavelet/ecg.dat +0 -256
  359. data/examples/wavelet/wavelet1.rb +0 -50
  360. data/ext/gsl_native/alf.c +0 -206
  361. data/ext/gsl_native/array.c +0 -553
  362. data/ext/gsl_native/array_complex.c +0 -245
  363. data/ext/gsl_native/blas.c +0 -28
  364. data/ext/gsl_native/blas1.c +0 -733
  365. data/ext/gsl_native/blas2.c +0 -1088
  366. data/ext/gsl_native/blas3.c +0 -880
  367. data/ext/gsl_native/block.c +0 -40
  368. data/ext/gsl_native/block_source.h +0 -885
  369. data/ext/gsl_native/bspline.c +0 -122
  370. data/ext/gsl_native/bundle.c +0 -3
  371. data/ext/gsl_native/cdf.c +0 -740
  372. data/ext/gsl_native/cheb.c +0 -531
  373. data/ext/gsl_native/combination.c +0 -275
  374. data/ext/gsl_native/common.c +0 -293
  375. data/ext/gsl_native/complex.c +0 -1002
  376. data/ext/gsl_native/const.c +0 -331
  377. data/ext/gsl_native/const_additional.c +0 -99
  378. data/ext/gsl_native/cqp.c +0 -283
  379. data/ext/gsl_native/deriv.c +0 -187
  380. data/ext/gsl_native/dht.c +0 -353
  381. data/ext/gsl_native/diff.c +0 -164
  382. data/ext/gsl_native/dirac.c +0 -388
  383. data/ext/gsl_native/eigen.c +0 -2322
  384. data/ext/gsl_native/error.c +0 -193
  385. data/ext/gsl_native/extconf.rb +0 -118
  386. data/ext/gsl_native/fft.c +0 -1095
  387. data/ext/gsl_native/fit.c +0 -204
  388. data/ext/gsl_native/fresnel.c +0 -312
  389. data/ext/gsl_native/function.c +0 -518
  390. data/ext/gsl_native/geometry.c +0 -139
  391. data/ext/gsl_native/graph.c +0 -1590
  392. data/ext/gsl_native/gsl.c +0 -259
  393. data/ext/gsl_native/gsl_narray.c +0 -794
  394. data/ext/gsl_native/histogram.c +0 -1964
  395. data/ext/gsl_native/histogram2d.c +0 -1042
  396. data/ext/gsl_native/histogram3d.c +0 -884
  397. data/ext/gsl_native/histogram3d_source.c +0 -749
  398. data/ext/gsl_native/histogram_find.c +0 -99
  399. data/ext/gsl_native/histogram_oper.c +0 -150
  400. data/ext/gsl_native/ieee.c +0 -88
  401. data/ext/gsl_native/include/rb_gsl.h +0 -136
  402. data/ext/gsl_native/include/rb_gsl_array.h +0 -214
  403. data/ext/gsl_native/include/rb_gsl_cheb.h +0 -19
  404. data/ext/gsl_native/include/rb_gsl_common.h +0 -348
  405. data/ext/gsl_native/include/rb_gsl_complex.h +0 -25
  406. data/ext/gsl_native/include/rb_gsl_const.h +0 -23
  407. data/ext/gsl_native/include/rb_gsl_dirac.h +0 -6
  408. data/ext/gsl_native/include/rb_gsl_eigen.h +0 -17
  409. data/ext/gsl_native/include/rb_gsl_fft.h +0 -49
  410. data/ext/gsl_native/include/rb_gsl_fit.h +0 -23
  411. data/ext/gsl_native/include/rb_gsl_function.h +0 -23
  412. data/ext/gsl_native/include/rb_gsl_graph.h +0 -68
  413. data/ext/gsl_native/include/rb_gsl_histogram.h +0 -63
  414. data/ext/gsl_native/include/rb_gsl_histogram3d.h +0 -97
  415. data/ext/gsl_native/include/rb_gsl_integration.h +0 -17
  416. data/ext/gsl_native/include/rb_gsl_interp.h +0 -41
  417. data/ext/gsl_native/include/rb_gsl_linalg.h +0 -21
  418. data/ext/gsl_native/include/rb_gsl_math.h +0 -20
  419. data/ext/gsl_native/include/rb_gsl_odeiv.h +0 -18
  420. data/ext/gsl_native/include/rb_gsl_poly.h +0 -67
  421. data/ext/gsl_native/include/rb_gsl_rational.h +0 -30
  422. data/ext/gsl_native/include/rb_gsl_rng.h +0 -20
  423. data/ext/gsl_native/include/rb_gsl_root.h +0 -22
  424. data/ext/gsl_native/include/rb_gsl_sf.h +0 -110
  425. data/ext/gsl_native/include/rb_gsl_statistics.h +0 -17
  426. data/ext/gsl_native/include/rb_gsl_tensor.h +0 -43
  427. data/ext/gsl_native/include/rb_gsl_with_narray.h +0 -31
  428. data/ext/gsl_native/include/templates_off.h +0 -87
  429. data/ext/gsl_native/include/templates_on.h +0 -241
  430. data/ext/gsl_native/integration.c +0 -1154
  431. data/ext/gsl_native/interp.c +0 -499
  432. data/ext/gsl_native/jacobi.c +0 -733
  433. data/ext/gsl_native/linalg.c +0 -3915
  434. data/ext/gsl_native/linalg_complex.c +0 -726
  435. data/ext/gsl_native/math.c +0 -706
  436. data/ext/gsl_native/matrix.c +0 -36
  437. data/ext/gsl_native/matrix_complex.c +0 -1733
  438. data/ext/gsl_native/matrix_double.c +0 -557
  439. data/ext/gsl_native/matrix_int.c +0 -255
  440. data/ext/gsl_native/matrix_source.h +0 -2708
  441. data/ext/gsl_native/min.c +0 -219
  442. data/ext/gsl_native/monte.c +0 -978
  443. data/ext/gsl_native/multifit.c +0 -1862
  444. data/ext/gsl_native/multimin.c +0 -778
  445. data/ext/gsl_native/multimin_fsdf.c +0 -156
  446. data/ext/gsl_native/multiroots.c +0 -952
  447. data/ext/gsl_native/multiset.c +0 -210
  448. data/ext/gsl_native/ndlinear.c +0 -320
  449. data/ext/gsl_native/nmf.c +0 -171
  450. data/ext/gsl_native/nmf_wrap.c +0 -75
  451. data/ext/gsl_native/ntuple.c +0 -469
  452. data/ext/gsl_native/odeiv.c +0 -947
  453. data/ext/gsl_native/ool.c +0 -879
  454. data/ext/gsl_native/permutation.c +0 -598
  455. data/ext/gsl_native/poly.c +0 -39
  456. data/ext/gsl_native/poly2.c +0 -265
  457. data/ext/gsl_native/poly_source.h +0 -1871
  458. data/ext/gsl_native/qrng.c +0 -160
  459. data/ext/gsl_native/randist.c +0 -1848
  460. data/ext/gsl_native/rational.c +0 -480
  461. data/ext/gsl_native/rng.c +0 -595
  462. data/ext/gsl_native/root.c +0 -407
  463. data/ext/gsl_native/sf.c +0 -1446
  464. data/ext/gsl_native/sf_airy.c +0 -200
  465. data/ext/gsl_native/sf_bessel.c +0 -871
  466. data/ext/gsl_native/sf_clausen.c +0 -28
  467. data/ext/gsl_native/sf_coulomb.c +0 -206
  468. data/ext/gsl_native/sf_coupling.c +0 -121
  469. data/ext/gsl_native/sf_dawson.c +0 -29
  470. data/ext/gsl_native/sf_debye.c +0 -148
  471. data/ext/gsl_native/sf_dilog.c +0 -43
  472. data/ext/gsl_native/sf_elementary.c +0 -46
  473. data/ext/gsl_native/sf_ellint.c +0 -206
  474. data/ext/gsl_native/sf_elljac.c +0 -30
  475. data/ext/gsl_native/sf_erfc.c +0 -89
  476. data/ext/gsl_native/sf_exp.c +0 -169
  477. data/ext/gsl_native/sf_expint.c +0 -201
  478. data/ext/gsl_native/sf_fermi_dirac.c +0 -148
  479. data/ext/gsl_native/sf_gamma.c +0 -343
  480. data/ext/gsl_native/sf_gegenbauer.c +0 -97
  481. data/ext/gsl_native/sf_hyperg.c +0 -203
  482. data/ext/gsl_native/sf_laguerre.c +0 -113
  483. data/ext/gsl_native/sf_lambert.c +0 -47
  484. data/ext/gsl_native/sf_legendre.c +0 -368
  485. data/ext/gsl_native/sf_log.c +0 -105
  486. data/ext/gsl_native/sf_mathieu.c +0 -235
  487. data/ext/gsl_native/sf_power.c +0 -47
  488. data/ext/gsl_native/sf_psi.c +0 -89
  489. data/ext/gsl_native/sf_synchrotron.c +0 -48
  490. data/ext/gsl_native/sf_transport.c +0 -76
  491. data/ext/gsl_native/sf_trigonometric.c +0 -210
  492. data/ext/gsl_native/sf_zeta.c +0 -115
  493. data/ext/gsl_native/signal.c +0 -303
  494. data/ext/gsl_native/siman.c +0 -713
  495. data/ext/gsl_native/sort.c +0 -207
  496. data/ext/gsl_native/spline.c +0 -377
  497. data/ext/gsl_native/stats.c +0 -787
  498. data/ext/gsl_native/sum.c +0 -168
  499. data/ext/gsl_native/tamu_anova.c +0 -56
  500. data/ext/gsl_native/tensor.c +0 -35
  501. data/ext/gsl_native/tensor_source.h +0 -1122
  502. data/ext/gsl_native/vector.c +0 -35
  503. data/ext/gsl_native/vector_complex.c +0 -2241
  504. data/ext/gsl_native/vector_double.c +0 -1433
  505. data/ext/gsl_native/vector_int.c +0 -202
  506. data/ext/gsl_native/vector_source.h +0 -3321
  507. data/ext/gsl_native/wavelet.c +0 -923
  508. data/lib/gsl.rb +0 -8
  509. data/lib/gsl/gnuplot.rb +0 -41
  510. data/lib/gsl/oper.rb +0 -43
  511. data/lib/gsl/version.rb +0 -3
  512. data/lib/ool.rb +0 -22
  513. data/lib/ool/conmin.rb +0 -30
  514. data/lib/rbgsl.rb +0 -1
  515. data/rdoc/alf.rdoc +0 -77
  516. data/rdoc/blas.rdoc +0 -269
  517. data/rdoc/bspline.rdoc +0 -42
  518. data/rdoc/changes.rdoc +0 -159
  519. data/rdoc/cheb.rdoc +0 -99
  520. data/rdoc/cholesky_complex.rdoc +0 -46
  521. data/rdoc/combi.rdoc +0 -125
  522. data/rdoc/complex.rdoc +0 -210
  523. data/rdoc/const.rdoc +0 -546
  524. data/rdoc/dht.rdoc +0 -122
  525. data/rdoc/diff.rdoc +0 -133
  526. data/rdoc/ehandling.rdoc +0 -50
  527. data/rdoc/eigen.rdoc +0 -401
  528. data/rdoc/fft.rdoc +0 -535
  529. data/rdoc/fit.rdoc +0 -284
  530. data/rdoc/function.rdoc +0 -94
  531. data/rdoc/graph.rdoc +0 -137
  532. data/rdoc/hist.rdoc +0 -409
  533. data/rdoc/hist2d.rdoc +0 -279
  534. data/rdoc/hist3d.rdoc +0 -112
  535. data/rdoc/integration.rdoc +0 -398
  536. data/rdoc/interp.rdoc +0 -231
  537. data/rdoc/intro.rdoc +0 -27
  538. data/rdoc/linalg.rdoc +0 -681
  539. data/rdoc/linalg_complex.rdoc +0 -88
  540. data/rdoc/math.rdoc +0 -276
  541. data/rdoc/matrix.rdoc +0 -1093
  542. data/rdoc/min.rdoc +0 -189
  543. data/rdoc/monte.rdoc +0 -234
  544. data/rdoc/multimin.rdoc +0 -312
  545. data/rdoc/multiroot.rdoc +0 -293
  546. data/rdoc/narray.rdoc +0 -177
  547. data/rdoc/ndlinear.rdoc +0 -250
  548. data/rdoc/nonlinearfit.rdoc +0 -348
  549. data/rdoc/ntuple.rdoc +0 -88
  550. data/rdoc/odeiv.rdoc +0 -378
  551. data/rdoc/perm.rdoc +0 -221
  552. data/rdoc/poly.rdoc +0 -335
  553. data/rdoc/qrng.rdoc +0 -90
  554. data/rdoc/randist.rdoc +0 -233
  555. data/rdoc/ref.rdoc +0 -93
  556. data/rdoc/rng.rdoc +0 -203
  557. data/rdoc/roots.rdoc +0 -305
  558. data/rdoc/sf.rdoc +0 -1622
  559. data/rdoc/siman.rdoc +0 -89
  560. data/rdoc/sort.rdoc +0 -94
  561. data/rdoc/start.rdoc +0 -16
  562. data/rdoc/stats.rdoc +0 -219
  563. data/rdoc/sum.rdoc +0 -65
  564. data/rdoc/tensor.rdoc +0 -251
  565. data/rdoc/tut.rdoc +0 -5
  566. data/rdoc/use.rdoc +0 -177
  567. data/rdoc/vector.rdoc +0 -1243
  568. data/rdoc/vector_complex.rdoc +0 -347
  569. data/rdoc/wavelet.rdoc +0 -218
  570. data/test/gsl/blas_test.rb +0 -79
  571. data/test/gsl/bspline_test.rb +0 -63
  572. data/test/gsl/cdf_test.rb +0 -1512
  573. data/test/gsl/cheb_test.rb +0 -80
  574. data/test/gsl/combination_test.rb +0 -100
  575. data/test/gsl/complex_test.rb +0 -20
  576. data/test/gsl/const_test.rb +0 -29
  577. data/test/gsl/deriv_test.rb +0 -62
  578. data/test/gsl/dht_test.rb +0 -79
  579. data/test/gsl/diff_test.rb +0 -53
  580. data/test/gsl/eigen_test.rb +0 -563
  581. data/test/gsl/err_test.rb +0 -23
  582. data/test/gsl/fit_test.rb +0 -101
  583. data/test/gsl/histo_test.rb +0 -14
  584. data/test/gsl/index_test.rb +0 -61
  585. data/test/gsl/integration_test.rb +0 -274
  586. data/test/gsl/interp_test.rb +0 -27
  587. data/test/gsl/linalg_test.rb +0 -463
  588. data/test/gsl/matrix_nmf_test.rb +0 -37
  589. data/test/gsl/matrix_test.rb +0 -98
  590. data/test/gsl/min_test.rb +0 -89
  591. data/test/gsl/monte_test.rb +0 -77
  592. data/test/gsl/multifit_test.rb +0 -753
  593. data/test/gsl/multimin_test.rb +0 -157
  594. data/test/gsl/multiroot_test.rb +0 -135
  595. data/test/gsl/multiset_test.rb +0 -52
  596. data/test/gsl/odeiv_test.rb +0 -275
  597. data/test/gsl/oper_test.rb +0 -98
  598. data/test/gsl/poly_test.rb +0 -338
  599. data/test/gsl/qrng_test.rb +0 -94
  600. data/test/gsl/quartic_test.rb +0 -28
  601. data/test/gsl/randist_test.rb +0 -122
  602. data/test/gsl/rng_test.rb +0 -303
  603. data/test/gsl/roots_test.rb +0 -78
  604. data/test/gsl/sf_test.rb +0 -2079
  605. data/test/gsl/stats_test.rb +0 -122
  606. data/test/gsl/sum_test.rb +0 -69
  607. data/test/gsl/tensor_test.rb +0 -396
  608. data/test/gsl/vector_test.rb +0 -223
  609. data/test/gsl/wavelet_test.rb +0 -130
  610. data/test/gsl_test.rb +0 -321
  611. data/test/test_helper.rb +0 -42
  612. data/uncrustify.cfg +0 -1693
@@ -1,1862 +0,0 @@
1
- /*
2
- multifit.c
3
- Ruby/GSL: Ruby extension library for GSL (GNU Scientific Library)
4
- (C) Copyright 2004 by Yoshiki Tsunesada
5
-
6
- Ruby/GSL is free software: you can redistribute it and/or modify it
7
- under the terms of the GNU General Public License.
8
- This library is distributed in the hope that it will be useful, but
9
- WITHOUT ANY WARRANTY.
10
- */
11
-
12
- #include "include/rb_gsl_fit.h"
13
- #include "include/rb_gsl_function.h"
14
- #include "include/rb_gsl_common.h"
15
-
16
- #ifdef HAVE_NDLINEAR_GSL_MULTIFIT_NDLINEAR_H
17
- #include <ndlinear/gsl_multifit_ndlinear.h>
18
- void Init_ndlinear(VALUE module);
19
- #endif
20
-
21
- #ifndef CHECK_WORKSPACE
22
- #define CHECK_WORKSPACE(x) if(CLASS_OF(x)!=cgsl_multifit_workspace) \
23
- rb_raise(rb_eTypeError, \
24
- "wrong argument type %s (GSL::MultiFit::Workspace expected)", \
25
- rb_class2name(CLASS_OF(x)));
26
- #endif
27
-
28
- #ifndef CHECK_MULTIFIT_FUNCTION_FDF
29
- #define CHECK_MULTIFIT_FUNCTION_FDF(x) if(CLASS_OF(x)!=cgsl_multifit_function_fdf) \
30
- rb_raise(rb_eTypeError, \
31
- "wrong argument type %s (GSL::MultiFit::Workspace expected)", \
32
- rb_class2name(CLASS_OF(x)));
33
- #endif
34
-
35
- static VALUE cgsl_multifit_workspace;
36
- static VALUE cgsl_multifit_function_fdf;
37
-
38
- enum MultiFit_Solver_Type {
39
- GSL_MULTIFIT_FDFSOLVER_LMSDER,
40
- GSL_MULTIFIT_FDFSOLVER_LMDER,
41
- };
42
-
43
- static VALUE rb_gsl_multifit_workspace_new(VALUE klass, VALUE n, VALUE p)
44
- {
45
- gsl_multifit_linear_workspace *w = NULL;
46
- CHECK_FIXNUM(n); CHECK_FIXNUM(p);
47
- w = gsl_multifit_linear_alloc(FIX2INT(n), FIX2INT(p));
48
- return Data_Wrap_Struct(cgsl_multifit_workspace, 0, gsl_multifit_linear_free, w);
49
- }
50
-
51
- static VALUE rb_gsl_multifit_linear(int argc, VALUE *argv, VALUE obj)
52
- {
53
- gsl_multifit_linear_workspace *space = NULL;
54
- gsl_matrix *x = NULL, *cov = NULL;
55
- gsl_vector *y = NULL, *c = NULL;
56
- double chisq;
57
- int status, flag = 0;
58
- VALUE vc, vcov;
59
- if (argc != 2 && argc != 3)
60
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 2 or 3)", argc);
61
- Data_Get_Matrix(argv[0], x);
62
- Data_Get_Vector(argv[1], y);
63
- if (argc == 3) {
64
- CHECK_WORKSPACE(argv[2]);
65
- Data_Get_Struct(argv[2], gsl_multifit_linear_workspace, space);
66
- } else {
67
- space = gsl_multifit_linear_alloc(x->size1, x->size2);
68
- flag = 1;
69
- }
70
- cov = gsl_matrix_alloc(x->size2, x->size2);
71
- c = gsl_vector_alloc(x->size2);
72
- status = gsl_multifit_linear(x, y, c, cov, &chisq, space);
73
- if (flag == 1) gsl_multifit_linear_free(space);
74
- vc = Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, c);
75
- vcov = Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, cov);
76
- return rb_ary_new3(4, vc, vcov, rb_float_new(chisq), INT2FIX(status));
77
- }
78
-
79
- static VALUE rb_gsl_multifit_wlinear(int argc, VALUE *argv, VALUE obj)
80
- {
81
- gsl_multifit_linear_workspace *space = NULL;
82
- gsl_matrix *x = NULL, *cov = NULL;
83
- gsl_vector *w = NULL, *y = NULL, *c = NULL;
84
- double chisq;
85
- int status, flag = 0;
86
- VALUE vc, vcov;
87
- if (argc != 3 && argc != 4)
88
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 3 or 4)", argc);
89
- Data_Get_Matrix(argv[0], x);
90
- Data_Get_Vector(argv[1], w);
91
- Data_Get_Vector(argv[2], y);
92
- if (argc == 4) {
93
- CHECK_WORKSPACE(argv[3]);
94
- Data_Get_Struct(argv[3], gsl_multifit_linear_workspace, space);
95
- } else {
96
- space = gsl_multifit_linear_alloc(x->size1, x->size2);
97
- flag = 1;
98
- }
99
- cov = gsl_matrix_alloc(x->size2, x->size2);
100
- c = gsl_vector_alloc(x->size2);
101
- status = gsl_multifit_wlinear(x, w, y, c, cov, &chisq, space);
102
- if (flag == 1) gsl_multifit_linear_free(space);
103
- vc = Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, c);
104
- vcov = Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, cov);
105
- return rb_ary_new3(4, vc, vcov, rb_float_new(chisq), INT2FIX(status));
106
- }
107
-
108
- static void calc_X_power(gsl_matrix *X, gsl_vector *x, size_t order)
109
- {
110
- size_t i, j;
111
- double val;
112
- for (i = 0; i < x->size; i++) {
113
- val = 1.0;
114
- gsl_matrix_set(X, i, 0, val);
115
- for (j = 1; j <= order; j++) {
116
- val *= gsl_vector_get(x, i);
117
- gsl_matrix_set(X, i, j, val);
118
- }
119
- }
120
- }
121
-
122
- static void calc_X_legendre(gsl_matrix *X, gsl_vector *v, size_t order)
123
- {
124
- size_t i, n;
125
- double a, b, c, x;
126
- for (i = 0; i < v->size; i++) {
127
- a = 1.0;
128
- b = gsl_vector_get(v, i);
129
- gsl_matrix_set(X, i, 0, a);
130
- gsl_matrix_set(X, i, 1, b);
131
- for (n = 2; n <= order; n++) {
132
- x = gsl_vector_get(v, i);
133
- c = ((2*n-1)*x*b - (n-1)*a)/n;
134
- gsl_matrix_set(X, i, n, c);
135
- a = b;
136
- b = c;
137
- }
138
- }
139
- }
140
-
141
- static VALUE rb_gsl_multifit_XXXfit(int argc, VALUE *argv, VALUE obj,
142
- void (*fn)(gsl_matrix*, gsl_vector*,size_t))
143
- {
144
- gsl_multifit_linear_workspace *space = NULL;
145
- gsl_matrix *X = NULL, *cov = NULL;
146
- gsl_vector *x, *y = NULL, *w, *c = NULL, *err;
147
- gsl_vector_view xx, yy, ww;
148
- size_t order, i;
149
- double chisq;
150
- int status, flag = 0, flagw = 0;
151
- VALUE vc, verr;
152
- if (argc != 3 && argc != 4 && argc != 5)
153
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 3 or 4)", argc);
154
- x = &xx.vector;
155
- w = &ww.vector;
156
- y = &yy.vector;
157
- Data_Get_Vector(argv[0], x);
158
- if (argc >= 3 && VECTOR_P(argv[2])) {
159
- Data_Get_Vector(argv[1], w);
160
- Data_Get_Vector(argv[2], y);
161
- order = NUM2INT(argv[3]);
162
- flagw = 1;
163
- } else {
164
- Data_Get_Vector(argv[1], y);
165
- order = NUM2INT(argv[2]);
166
- flagw = 0;
167
- }
168
- if (rb_obj_is_kind_of(argv[argc-1], cgsl_multifit_workspace)) {
169
- Data_Get_Struct(argv[argc-1], gsl_multifit_linear_workspace, space);
170
- } else {
171
- space = gsl_multifit_linear_alloc(x->size, order + 1);
172
- flag = 1;
173
- }
174
- cov = gsl_matrix_alloc(order + 1, order + 1);
175
- c = gsl_vector_alloc(order + 1);
176
- X = gsl_matrix_alloc(x->size, order + 1);
177
- (*fn)(X, x, order);
178
- if (flagw == 0) status = gsl_multifit_linear(X, y, c, cov, &chisq, space);
179
- else status = gsl_multifit_wlinear(X, w, y, c, cov, &chisq, space);
180
- if (flag == 1) gsl_multifit_linear_free(space);
181
- err = gsl_vector_alloc(order + 1);
182
- vc = Data_Wrap_Struct(cgsl_poly, 0, gsl_vector_free, c);
183
- verr = Data_Wrap_Struct(cgsl_poly, 0, gsl_vector_free, err);
184
- for (i = 0; i < err->size; i++)
185
- gsl_vector_set(err, i, sqrt(chisq/((double)x->size-err->size)*gsl_matrix_get(cov, i, i)));
186
- gsl_matrix_free(X);
187
- gsl_matrix_free(cov);
188
- return rb_ary_new3(4, vc, verr, rb_float_new(chisq), INT2FIX(status));
189
- }
190
-
191
- static VALUE rb_gsl_multifit_polyfit(int argc, VALUE *argv, VALUE obj)
192
- {
193
- return rb_gsl_multifit_XXXfit(argc, argv, obj, calc_X_power);
194
- }
195
-
196
- static VALUE rb_gsl_multifit_legfit(int argc, VALUE *argv, VALUE obj)
197
- {
198
- return rb_gsl_multifit_XXXfit(argc, argv, obj, calc_X_legendre);
199
- }
200
-
201
- /**********/
202
-
203
- static VALUE rb_gsl_multifit_fdfsolver_new(int argc, VALUE *argv, VALUE klass)
204
- {
205
- const gsl_multifit_fdfsolver_type *T;
206
- gsl_multifit_fdfsolver *solver = NULL;
207
- size_t n, p;
208
- char name[64];
209
- switch (argc) {
210
- case 3:
211
- switch (TYPE(argv[0])) {
212
- case T_STRING:
213
- strcpy(name, STR2CSTR(argv[0]));
214
- if (str_tail_grep(name, "lmsder") == 0) {
215
- T = gsl_multifit_fdfsolver_lmsder;
216
- } else if (str_tail_grep(name, "lmder") == 0) {
217
- T = gsl_multifit_fdfsolver_lmder;
218
- } else {
219
- rb_raise(rb_eTypeError, "unknown solver type %s (lmsder of lmder)",
220
- name);
221
- }
222
- break;
223
- case T_FIXNUM:
224
- switch (FIX2INT(argv[0])) {
225
- case GSL_MULTIFIT_FDFSOLVER_LMSDER:
226
- T = gsl_multifit_fdfsolver_lmsder;
227
- break;
228
- case GSL_MULTIFIT_FDFSOLVER_LMDER:
229
- T = gsl_multifit_fdfsolver_lmder;
230
- break;
231
- default:
232
- rb_raise(rb_eTypeError,
233
- "unknown solver type (GSL::MultiFit::FdfSolver::LMSDER or LMDER expected)");
234
- break;
235
- }
236
- break;
237
- default:
238
- rb_raise(rb_eTypeError, "wrong argument type %s (Fixnum or String)",
239
- rb_class2name(CLASS_OF(argv[0])));
240
- break;
241
- }
242
- CHECK_FIXNUM(argv[1]); CHECK_FIXNUM(argv[2]);
243
- n = FIX2INT(argv[1]);
244
- p = FIX2INT(argv[2]);
245
- break;
246
- case 2:
247
- CHECK_FIXNUM(argv[0]); CHECK_FIXNUM(argv[1]);
248
- T = gsl_multifit_fdfsolver_lmsder;
249
- n = FIX2INT(argv[0]);
250
- p = FIX2INT(argv[1]);
251
- break;
252
- default:
253
- rb_raise(rb_eArgError, "wrong number of arguments");
254
- break;
255
- }
256
- solver = gsl_multifit_fdfsolver_alloc(T, n, p);
257
- return Data_Wrap_Struct(klass, 0, gsl_multifit_fdfsolver_free, solver);
258
- }
259
-
260
- static VALUE rb_gsl_multifit_fdfsolver_set(VALUE obj, VALUE ff, VALUE xx)
261
- {
262
- gsl_multifit_fdfsolver *solver = NULL;
263
- gsl_multifit_function_fdf *f = NULL;
264
- gsl_vector *x = NULL;
265
- int status;
266
- CHECK_MULTIFIT_FUNCTION_FDF(ff);
267
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
268
- Data_Get_Struct(ff, gsl_multifit_function_fdf, f);
269
- Data_Get_Vector(xx, x);
270
- status = gsl_multifit_fdfsolver_set(solver, f, x);
271
- return INT2FIX(status);
272
- }
273
-
274
- static VALUE rb_gsl_multifit_fdfsolver_name(VALUE obj)
275
- {
276
- gsl_multifit_fdfsolver *solver = NULL;
277
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
278
- return rb_str_new2(gsl_multifit_fdfsolver_name(solver));
279
- }
280
-
281
- static VALUE rb_gsl_multifit_fdfsolver_iterate(VALUE obj)
282
- {
283
- gsl_multifit_fdfsolver *solver = NULL;
284
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
285
- return INT2FIX(gsl_multifit_fdfsolver_iterate(solver));
286
- }
287
-
288
- static VALUE rb_gsl_multifit_fdfsolver_position(VALUE obj)
289
- {
290
- gsl_multifit_fdfsolver *solver = NULL;
291
- gsl_vector *x = NULL;
292
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
293
- x = gsl_multifit_fdfsolver_position(solver);
294
- return Data_Wrap_Struct(cgsl_vector_view_ro, 0, NULL, x);
295
- }
296
-
297
- static VALUE rb_gsl_multifit_fdfsolver_print_state(VALUE obj, VALUE i)
298
- {
299
- gsl_multifit_fdfsolver *solver = NULL;
300
- CHECK_FIXNUM(i);
301
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
302
- printf("iter: %d x = %15.8f %15.8f %15.8f |f(x)| = %g\n",
303
- (int) FIX2INT(i), gsl_vector_get(solver->x, 0), gsl_vector_get(solver->x, 1),
304
- gsl_vector_get(solver->x, 2), gsl_blas_dnrm2(solver->f));
305
- return Qtrue;
306
- }
307
-
308
- static VALUE rb_gsl_multifit_fdfsolver_fdf(VALUE obj)
309
- {
310
- gsl_multifit_fdfsolver *solver = NULL;
311
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
312
- return Data_Wrap_Struct(cgsl_multifit_function_fdf, 0, NULL, solver->fdf);
313
- }
314
-
315
- static VALUE rb_gsl_multifit_fdfsolver_test_delta(VALUE obj, VALUE r, VALUE a)
316
- {
317
- gsl_multifit_fdfsolver *solver = NULL;
318
- Need_Float(r); Need_Float(a);
319
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
320
- return INT2FIX(gsl_multifit_test_delta(solver->dx, solver->x, NUM2DBL(r), NUM2DBL(a)));
321
- }
322
-
323
- static VALUE rb_gsl_multifit_fdfsolver_test_gradient(int argc, VALUE *argv, VALUE obj)
324
- {
325
- gsl_multifit_fdfsolver *solver = NULL;
326
- gsl_vector *g = NULL;
327
- int status;
328
- double epsabs;
329
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
330
- switch (argc) {
331
- case 1:
332
- Need_Float(argv[0]);
333
- g = gsl_vector_alloc(solver->x->size);
334
- gsl_multifit_gradient(solver->J, solver->f, g);
335
- epsabs = NUM2DBL(argv[0]);
336
- status = gsl_multifit_test_gradient(g, epsabs);
337
- gsl_vector_free(g);
338
- break;
339
- case 2:
340
- Need_Float(argv[1]);
341
- Data_Get_Vector(argv[0], g);
342
- epsabs = NUM2DBL(argv[1]);
343
- status = gsl_multifit_test_gradient(g, epsabs);
344
- break;
345
- default:
346
- rb_raise(rb_eArgError, "wrong number of arguments");
347
- break;
348
- }
349
- return INT2FIX(status);
350
- }
351
-
352
- static VALUE rb_gsl_multifit_fdfsolver_gradient(int argc, VALUE *argv, VALUE obj)
353
- {
354
- gsl_multifit_fdfsolver *solver = NULL;
355
- gsl_vector *g = NULL;
356
- // local variable "status" declared and set, but never used
357
- //int status;
358
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
359
- if (argc == 1) {
360
- Data_Get_Vector(argv[0], g);
361
- return INT2FIX(gsl_multifit_gradient(solver->J, solver->f, g));
362
- } else {
363
- g = gsl_vector_alloc(solver->x->size);
364
- /*status =*/ gsl_multifit_gradient(solver->J, solver->f, g);
365
- return Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, g);
366
- }
367
- }
368
-
369
- static VALUE rb_gsl_multifit_fdfsolver_covar(int argc, VALUE *argv, VALUE obj)
370
- {
371
- gsl_multifit_fdfsolver *solver = NULL;
372
- gsl_matrix *covar = NULL;
373
- double epsrel;
374
- // local variable "status" declared and set, but never used
375
- //int status;
376
- if (argc < 1) rb_raise(rb_eArgError, "too few arguments");
377
- Need_Float(argv[0]);
378
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
379
- epsrel = NUM2DBL(argv[0]);
380
- switch (argc) {
381
- case 1:
382
- covar = gsl_matrix_alloc(solver->x->size, solver->x->size);
383
- /*status =*/ gsl_multifit_covar(solver->J, epsrel, covar);
384
- return Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, covar);
385
- break;
386
- case 2:
387
- Data_Get_Matrix(argv[1], covar);
388
- return INT2FIX(gsl_multifit_covar(solver->J, epsrel, covar));
389
- break;
390
- default:
391
- rb_raise(rb_eArgError, "wrong number of arguments");
392
- break;
393
- }
394
- }
395
-
396
- static VALUE rb_gsl_multifit_fdfsolver_x(VALUE obj)
397
- {
398
- gsl_multifit_fdfsolver *solver = NULL;
399
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
400
- return Data_Wrap_Struct(cgsl_vector_view_ro, 0, NULL, solver->x);
401
- }
402
-
403
- static VALUE rb_gsl_multifit_fdfsolver_dx(VALUE obj)
404
- {
405
- gsl_multifit_fdfsolver *solver = NULL;
406
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
407
- return Data_Wrap_Struct(cgsl_vector_view_ro, 0, NULL, solver->dx);
408
- }
409
-
410
- static VALUE rb_gsl_multifit_fdfsolver_f(VALUE obj)
411
- {
412
- gsl_multifit_fdfsolver *solver = NULL;
413
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
414
- return Data_Wrap_Struct(cgsl_vector_view_ro, 0, NULL, solver->f);
415
- }
416
-
417
- static VALUE rb_gsl_multifit_fdfsolver_J(VALUE obj)
418
- {
419
- gsl_multifit_fdfsolver *solver = NULL;
420
- Data_Get_Struct(obj, gsl_multifit_fdfsolver, solver);
421
- return Data_Wrap_Struct(cgsl_matrix_view_ro, 0, NULL, solver->J);
422
- }
423
-
424
- /* singleton */
425
- static VALUE rb_gsl_multifit_test_delta(VALUE obj, VALUE ddx, VALUE xx, VALUE a, VALUE r)
426
- {
427
- gsl_vector *dx = NULL, *x = NULL;
428
- Need_Float(a); Need_Float(r);
429
- Data_Get_Vector(ddx, dx);
430
- Data_Get_Vector(xx, x);
431
- return INT2FIX(gsl_multifit_test_delta(dx, x, NUM2DBL(a), NUM2DBL(r)));
432
- }
433
-
434
- static VALUE rb_gsl_multifit_test_gradient(VALUE obj, VALUE gg, VALUE a)
435
- {
436
- gsl_vector *g = NULL;
437
- Need_Float(a);
438
- Data_Get_Vector(gg, g);
439
- return INT2FIX(gsl_multifit_test_gradient(g, NUM2DBL(a)));
440
- }
441
-
442
- static VALUE rb_gsl_multifit_gradient(int argc, VALUE *argv, VALUE obj)
443
- {
444
- gsl_vector *g = NULL, *f = NULL;
445
- gsl_matrix *J = NULL;
446
- // local variable "status" declared and set, but never used
447
- //int status;
448
- switch (argc) {
449
- case 2:
450
- Data_Get_Matrix(argv[0], J);
451
- Data_Get_Vector(argv[1], f);
452
- g = gsl_vector_alloc(f->size);
453
- /*status =*/ gsl_multifit_gradient(J, f, g);
454
- return Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, g);
455
- break;
456
- case 3:
457
- Data_Get_Matrix(argv[0], J);
458
- Data_Get_Vector(argv[1], f);
459
- Data_Get_Vector(argv[2], g);
460
- return INT2FIX(gsl_multifit_gradient(J, f, g));
461
- break;
462
- default:
463
- rb_raise(rb_eArgError, "wrong number of arguments");
464
- break;
465
- }
466
- }
467
-
468
- static VALUE rb_gsl_multifit_covar(int argc, VALUE *argv, VALUE obj)
469
- {
470
- gsl_matrix *J = NULL, *covar = NULL;
471
- double epsrel;
472
- int status;
473
- switch (argc) {
474
- case 2:
475
- Need_Float(argv[1]);
476
- Data_Get_Matrix(argv[0], J);
477
- epsrel = NUM2DBL(argv[1]);
478
- covar = gsl_matrix_alloc(J->size2, J->size2);
479
- /*status =*/ gsl_multifit_covar(J, epsrel, covar);
480
- return Data_Wrap_Struct(cgsl_matrix, 0, gsl_matrix_free, covar);
481
- break;
482
- case 3:
483
- Need_Float(argv[1]);
484
- Data_Get_Matrix(argv[0], J);
485
- epsrel = NUM2DBL(argv[1]);
486
- Data_Get_Matrix(argv[2], covar);
487
- status = gsl_multifit_covar(J, epsrel, covar);
488
- return INT2FIX(status);
489
- break;
490
- default:
491
- rb_raise(rb_eArgError, "wrong number of arguments");
492
- break;
493
- }
494
- }
495
-
496
- static void rb_gsl_multifit_define_const(VALUE klass)
497
- {
498
- rb_define_const(klass, "LMSDER",
499
- INT2FIX(GSL_MULTIFIT_FDFSOLVER_LMSDER));
500
- rb_define_const(klass, "LMDER",
501
- INT2FIX(GSL_MULTIFIT_FDFSOLVER_LMDER));
502
-
503
- rb_define_const(klass, "Lmsder",
504
- INT2FIX(GSL_MULTIFIT_FDFSOLVER_LMSDER));
505
- rb_define_const(klass, "Lmder",
506
- INT2FIX(GSL_MULTIFIT_FDFSOLVER_LMDER));
507
- }
508
-
509
- static void gsl_multifit_function_fdf_free(gsl_multifit_function_fdf *f);
510
- static void gsl_multifit_function_fdf_free(gsl_multifit_function_fdf *f)
511
- {
512
- free((gsl_multifit_function_fdf *) f);
513
- }
514
-
515
- static void gsl_multifit_function_fdf_mark(gsl_multifit_function_fdf *F);
516
- static void gsl_multifit_function_fdf_mark(gsl_multifit_function_fdf *F)
517
- {
518
- rb_gc_mark((VALUE) F->params);
519
- }
520
-
521
- static int gsl_multifit_function_fdf_f(const gsl_vector *x, void *params,
522
- gsl_vector *f);
523
- static int gsl_multifit_function_fdf_df(const gsl_vector *x, void *params,
524
- gsl_matrix *J);
525
- static int gsl_multifit_function_fdf_fdf(const gsl_vector *x, void *params,
526
- gsl_vector *f, gsl_matrix *J);
527
-
528
- static VALUE rb_gsl_multifit_function_fdf_set_procs(int argc, VALUE *argv, VALUE obj);
529
-
530
- static VALUE rb_gsl_multifit_function_fdf_new(int argc, VALUE *argv, VALUE klass)
531
- {
532
- gsl_multifit_function_fdf *func = NULL;
533
- VALUE obj;
534
- func = ALLOC(gsl_multifit_function_fdf);
535
- func->f = &gsl_multifit_function_fdf_f;
536
- func->df = &gsl_multifit_function_fdf_df;
537
- func->fdf = &gsl_multifit_function_fdf_fdf;
538
- func->params = NULL;
539
- obj = Data_Wrap_Struct(klass, gsl_multifit_function_fdf_mark, gsl_multifit_function_fdf_free, func);
540
- switch (argc) {
541
- case 0:
542
- case 1:
543
- break;
544
- case 2:
545
- case 3:
546
- rb_gsl_multifit_function_fdf_set_procs(argc, argv, obj);
547
- break;
548
- default:
549
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 0-3)", argc);
550
- break;
551
- }
552
- return obj;
553
- }
554
-
555
- static VALUE rb_gsl_multifit_function_fdf_set_procs(int argc, VALUE *argv, VALUE obj)
556
- {
557
- gsl_multifit_function_fdf *func = NULL;
558
- VALUE ary;
559
- Data_Get_Struct(obj, gsl_multifit_function_fdf, func);
560
- if (func->params == NULL) {
561
- ary = rb_ary_new2(4);
562
- /* (VALUE) func->params = ary;*/
563
- func->params = (void *) ary;
564
- } else {
565
- ary = (VALUE) func->params;
566
- }
567
- rb_ary_store(ary, 0, argv[0]);
568
- rb_ary_store(ary, 1, argv[1]);
569
- switch (argc) {
570
- case 2:
571
- break;
572
- case 3:
573
- if (TYPE(argv[2]) == T_FIXNUM) {
574
- func->p = FIX2INT(argv[2]);
575
- rb_ary_store(ary, 2, Qnil);
576
- } else rb_ary_store(ary, 2, argv[2]);
577
- break;
578
- case 4:
579
- if (TYPE(argv[2]) == T_FIXNUM) {
580
- func->p = FIX2INT(argv[2]);
581
- rb_ary_store(ary, 2, argv[3]);
582
- } else {
583
- func->p = FIX2INT(argv[3]);
584
- rb_ary_store(ary, 2, argv[2]);
585
- }
586
- break;
587
- default:
588
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 3 or 4)", argc);
589
- break;
590
- }
591
- return obj;
592
- }
593
-
594
- static VALUE rb_gsl_multifit_function_fdf_set_data(int argc, VALUE *argv, VALUE obj)
595
- {
596
- VALUE ary, ary2;
597
- gsl_multifit_function_fdf *func = NULL;
598
- Data_Get_Struct(obj, gsl_multifit_function_fdf, func);
599
- if (func->params == NULL) {
600
- ary = rb_ary_new2(4);
601
- /* (VALUE) func->params = ary;*/
602
- func->params = (void *) ary;
603
- } else {
604
- ary = (VALUE) func->params;
605
- }
606
- switch (argc) {
607
- case 2:
608
- ary2 = rb_ary_new3(2, argv[0], argv[1]); /* t, y */
609
- break;
610
- case 3:
611
- ary2 = rb_ary_new3(3, argv[0], argv[1], argv[2]); /* t, y, sigma */
612
- break;
613
- default:
614
- rb_raise(rb_eArgError, "wrong number of arguments (%d for 2 or 3)", argc);
615
- break;
616
- }
617
- func->n = NUM2INT(rb_funcall(argv[0], rb_intern("size"), 0));
618
- rb_ary_store(ary, 3, ary2);
619
- return obj;
620
- }
621
-
622
- static int gsl_multifit_function_fdf_f(const gsl_vector *x, void *params,
623
- gsl_vector *f)
624
- {
625
- VALUE vt_y_sigma, vt, vy, vsigma, vf, vx, proc, ary;
626
- ary = (VALUE) params;
627
- vt_y_sigma = rb_ary_entry(ary, 3);
628
- proc = rb_ary_entry(ary, 0);
629
- vx = Data_Wrap_Struct(cgsl_vector, 0, NULL, (gsl_vector *) x);
630
- vf = Data_Wrap_Struct(cgsl_vector, 0, NULL, f);
631
- switch (RARRAY_LEN(vt_y_sigma)) {
632
- case 2:
633
- vt = rb_ary_entry(vt_y_sigma, 0);
634
- vy = rb_ary_entry(vt_y_sigma, 1);
635
- rb_funcall(proc, RBGSL_ID_call, 4, vx, vt, vy, vf);
636
- break;
637
- case 3:
638
- vt = rb_ary_entry(vt_y_sigma, 0);
639
- vy = rb_ary_entry(vt_y_sigma, 1);
640
- vsigma = rb_ary_entry(vt_y_sigma,2);
641
- rb_funcall(proc, RBGSL_ID_call, 5, vx, vt, vy, vsigma, vf);
642
- break;
643
- default:
644
- rb_raise(rb_eArgError, "bad argument");
645
- break;
646
- }
647
- return GSL_SUCCESS;
648
- }
649
-
650
- static int gsl_multifit_function_fdf_df(const gsl_vector *x, void *params,
651
- gsl_matrix *J)
652
- {
653
- VALUE vt_y_sigma, vt, vy, vsigma, vJ, vx, proc, ary;
654
- ary = (VALUE) params;
655
- vt_y_sigma = rb_ary_entry(ary, 3);
656
- proc = rb_ary_entry(ary, 1);
657
- vx = Data_Wrap_Struct(cgsl_vector, 0, NULL, (gsl_vector *) x);
658
- vJ = Data_Wrap_Struct(cgsl_matrix, 0, NULL, J);
659
- switch (RARRAY_LEN(vt_y_sigma)) {
660
- case 2:
661
- vt = rb_ary_entry(vt_y_sigma, 0);
662
- vy = rb_ary_entry(vt_y_sigma, 1);
663
- rb_funcall(proc, RBGSL_ID_call, 4, vx, vt, vy, vJ);
664
- break;
665
- case 3:
666
- vt = rb_ary_entry(vt_y_sigma, 0);
667
- vy = rb_ary_entry(vt_y_sigma, 1);
668
- vsigma = rb_ary_entry(vt_y_sigma,2);
669
- rb_funcall(proc, RBGSL_ID_call, 5, vx, vt, vy, vsigma, vJ);
670
- break;
671
- default:
672
- rb_raise(rb_eArgError, "bad argument");
673
- break;
674
- }
675
- return GSL_SUCCESS;
676
- }
677
-
678
- static int gsl_multifit_function_fdf_fdf(const gsl_vector *x, void *params,
679
- gsl_vector *f, gsl_matrix *J)
680
- {
681
- VALUE vt_y_sigma, vt, vy, vsigma, vf, vJ, vx, proc_f, proc_df, proc_fdf;
682
- VALUE ary;
683
- ary = (VALUE) params;
684
- vt_y_sigma = rb_ary_entry(ary, 3);
685
- proc_f = rb_ary_entry(ary, 0);
686
- proc_df = rb_ary_entry(ary, 1);
687
- proc_fdf = rb_ary_entry(ary, 2);
688
- vx = Data_Wrap_Struct(cgsl_vector, 0, NULL, (gsl_vector *) x);
689
- vf = Data_Wrap_Struct(cgsl_vector, 0, NULL, f);
690
- vJ = Data_Wrap_Struct(cgsl_matrix, 0, NULL, J);
691
- switch (RARRAY_LEN(vt_y_sigma)) {
692
- case 2:
693
- vt = rb_ary_entry(vt_y_sigma, 0);
694
- vy = rb_ary_entry(vt_y_sigma, 1);
695
- if (NIL_P(proc_fdf)) {
696
- rb_funcall(proc_f, RBGSL_ID_call, 4, vx, vt, vy, vf);
697
- rb_funcall(proc_df, RBGSL_ID_call, 4, vx, vt, vy, vJ);
698
- } else
699
- rb_funcall(proc_fdf, RBGSL_ID_call, 5, vx, vt, vy, vf, vJ);
700
- break;
701
- case 3:
702
- vt = rb_ary_entry(vt_y_sigma, 0);
703
- vy = rb_ary_entry(vt_y_sigma, 1);
704
- vsigma = rb_ary_entry(vt_y_sigma,2);
705
- if (NIL_P(proc_fdf)) {
706
- rb_funcall(proc_f, RBGSL_ID_call, 5, vx, vt, vy, vsigma, vf);
707
- rb_funcall(proc_df, RBGSL_ID_call, 5, vx, vt, vy, vsigma, vJ);
708
- } else
709
- rb_funcall(proc_fdf, RBGSL_ID_call, 6, vx, vt, vy, vsigma, vf, vJ);
710
- break;
711
- default:
712
- rb_raise(rb_eArgError, "bad argument");
713
- break;
714
- }
715
- return GSL_SUCCESS;
716
- }
717
-
718
- static VALUE rb_gsl_multifit_function_fdf_params(VALUE obj)
719
- {
720
- gsl_multifit_function_fdf *f = NULL;
721
- Data_Get_Struct(obj, gsl_multifit_function_fdf, f);
722
- return (VALUE) f->params;
723
- }
724
-
725
- static VALUE rb_gsl_multifit_function_fdf_n(VALUE obj)
726
- {
727
- gsl_multifit_function_fdf *f = NULL;
728
- Data_Get_Struct(obj, gsl_multifit_function_fdf, f);
729
- return INT2FIX(f->n);
730
- }
731
-
732
- static VALUE rb_gsl_multifit_function_fdf_set_n(VALUE obj, VALUE n)
733
- {
734
- gsl_multifit_function_fdf *f = NULL;
735
- Data_Get_Struct(obj, gsl_multifit_function_fdf, f);
736
- f->n = FIX2INT(n);
737
- return obj;
738
- }
739
-
740
- static VALUE rb_gsl_multifit_function_fdf_p(VALUE obj)
741
- {
742
- gsl_multifit_function_fdf *f = NULL;
743
- Data_Get_Struct(obj, gsl_multifit_function_fdf, f);
744
- return INT2FIX(f->p);
745
- }
746
-
747
- /*****/
748
- struct fitting_xydata {
749
- gsl_vector *x, *y, *w;
750
- };
751
-
752
- /* Gaussian fit
753
- y = y0 + A exp(-(x-x0/sigma)^2)
754
- v[0] = y0
755
- v[1] = A
756
- v[2] = x0
757
- v[3] = var = sigma^2
758
- */
759
- static int Gaussian_f(const gsl_vector *v, void *data, gsl_vector *f)
760
- {
761
- gsl_vector *x, *y, *w;
762
- double y0, A, x0, var, xi, yi, wi;
763
- size_t i;
764
- struct fitting_xydata *xydata;
765
- xydata = (struct fitting_xydata*) data;
766
- x = xydata->x;
767
- y = xydata->y;
768
- w = xydata->w;
769
- var = gsl_vector_get(v, 3);
770
- x0 = gsl_vector_get(v, 2);
771
- A = gsl_vector_get(v, 1);
772
- y0 = gsl_vector_get(v, 0);
773
- for (i = 0; i < x->size; i++) {
774
- xi = gsl_vector_get(x, i);
775
- yi = gsl_vector_get(y, i);
776
- if (w) wi = gsl_vector_get(w, i);
777
- else wi = 1.0;
778
- gsl_vector_set(f, i, (A*exp(-(xi - x0)*(xi - x0)/var/2.0) + y0 - yi)*wi);
779
- }
780
- return GSL_SUCCESS;
781
- }
782
-
783
- static int Gaussian_df(const gsl_vector *v, void *data, gsl_matrix *J)
784
- {
785
- double A, x0, var, xi, yy, wi;
786
- size_t i;
787
- struct fitting_xydata *xydata;
788
- gsl_vector *x, *w;
789
- xydata = (struct fitting_xydata*) data;
790
- x = xydata->x;
791
- w = xydata->w;
792
- var = gsl_vector_get(v, 3);
793
- x0 = gsl_vector_get(v, 2);
794
- A = gsl_vector_get(v, 1);
795
- for (i = 0; i < x->size; i++) {
796
- xi = gsl_vector_get(x, i);
797
- if (w) wi = gsl_vector_get(w, i);
798
- else wi = 1.0;
799
- yy = exp(-(xi - x0)*(xi - x0)/var/2.0);
800
- gsl_matrix_set(J, i, 3, A*yy*(xi - x0)*(xi - x0)/2/var/var*wi);
801
- gsl_matrix_set(J, i, 2, A*yy*(xi - x0)/var*wi);
802
- gsl_matrix_set(J, i, 1, yy*wi);
803
- gsl_matrix_set(J, i, 0, 1.0*wi);
804
- }
805
- return GSL_SUCCESS;
806
- }
807
-
808
- static int Gaussian_fdf(const gsl_vector *v, void *data,
809
- gsl_vector *f, gsl_matrix *J)
810
- {
811
- Gaussian_f(v, data, f);
812
- Gaussian_df(v, data, J);
813
- return GSL_SUCCESS;
814
- }
815
-
816
- /* 2 Gaussian fit
817
- y = y0 + A1 exp(-(x-x01/sigma1)^2) + A2 exp(-(x-x02/sigma2)^2)
818
- v[0] = y0
819
- v[1] = A1
820
- v[2] = x01
821
- v[3] = var1 = sigma1^2
822
- v[4] = A2
823
- v[5] = x02
824
- v[6] = var2 = sigma2^2
825
- */
826
- static int Gaussian_2peaks_f(const gsl_vector *v, void *data, gsl_vector *f)
827
- {
828
- gsl_vector *x, *y, *w;
829
- double y0, A1, x01, var1, A2, x02, var2, xi, yi, wi;
830
- size_t i;
831
- struct fitting_xydata *xydata;
832
- xydata = (struct fitting_xydata*) data;
833
- x = xydata->x;
834
- y = xydata->y;
835
- w = xydata->w;
836
- y0 = gsl_vector_get(v, 0);
837
- A1 = gsl_vector_get(v, 1);
838
- x01 = gsl_vector_get(v, 2);
839
- var1 = gsl_vector_get(v, 3);
840
- A2 = gsl_vector_get(v, 4);
841
- x02 = gsl_vector_get(v, 5);
842
- var2 = gsl_vector_get(v, 6);
843
- for (i = 0; i < x->size; i++) {
844
- xi = gsl_vector_get(x, i);
845
- yi = gsl_vector_get(y, i);
846
- if (w) wi = gsl_vector_get(w, i);
847
- else wi = 1.0;
848
- gsl_vector_set(f, i, (A1*exp(-(xi - x01)*(xi - x01)/var1/2.0) + A2*exp(-(xi - x02)*(xi - x02)/var2/2.0) + y0 - yi)*wi);
849
- }
850
- return GSL_SUCCESS;
851
- }
852
-
853
- static int Gaussian_2peaks_df(const gsl_vector *v, void *data, gsl_matrix *J)
854
- {
855
- double A1, x01, var1, A2, x02, var2, xi, yy, wi;
856
- size_t i;
857
- struct fitting_xydata *xydata;
858
- gsl_vector *x, *w;
859
- xydata = (struct fitting_xydata*) data;
860
- x = xydata->x;
861
- w = xydata->w;
862
- A1 = gsl_vector_get(v, 1);
863
- x01 = gsl_vector_get(v, 2);
864
- var1 = gsl_vector_get(v, 3);
865
- A2 = gsl_vector_get(v, 4);
866
- x02 = gsl_vector_get(v, 5);
867
- var2 = gsl_vector_get(v, 6);
868
- for (i = 0; i < x->size; i++) {
869
- xi = gsl_vector_get(x, i);
870
- if (w) wi = gsl_vector_get(w, i);
871
- else wi = 1.0;
872
- yy = exp(-(xi - x01)*(xi - x01)/var1/2.0);
873
- gsl_matrix_set(J, i, 0, 1.0*wi);
874
- gsl_matrix_set(J, i, 1, yy*wi);
875
- gsl_matrix_set(J, i, 2, A1*yy*(xi - x01)/var1*wi);
876
- gsl_matrix_set(J, i, 3, A1*yy*(xi - x01)*(xi - x01)/2/var1/var1*wi);
877
-
878
- yy = exp(-(xi - x02)*(xi - x02)/var2/2.0);
879
- gsl_matrix_set(J, i, 4, yy*wi);
880
- gsl_matrix_set(J, i, 5, A2*yy*(xi - x02)/var2*wi);
881
- gsl_matrix_set(J, i, 6, A2*yy*(xi - x02)*(xi - x02)/2/var2/var2*wi);
882
- }
883
- return GSL_SUCCESS;
884
- }
885
-
886
- static int Gaussian_2peaks_fdf(const gsl_vector *v, void *data,
887
- gsl_vector *f, gsl_matrix *J)
888
- {
889
- Gaussian_2peaks_f(v, data, f);
890
- Gaussian_2peaks_df(v, data, J);
891
- return GSL_SUCCESS;
892
- }
893
-
894
- /* Exponential fit
895
- y = y0 + A exp(-bx)
896
- v[0] = y0
897
- v[1] = A
898
- v[2] = b
899
- */
900
- static int Exponential_f(const gsl_vector *v, void *data, gsl_vector *f)
901
- {
902
- gsl_vector *x, *y, *w;
903
- double y0, A, b, xi, yi, wi;
904
- size_t i;
905
- struct fitting_xydata *xydata;
906
- xydata = (struct fitting_xydata*) data;
907
- x = xydata->x;
908
- y = xydata->y;
909
- w = xydata->w;
910
- y0 = gsl_vector_get(v, 0);
911
- A = gsl_vector_get(v, 1);
912
- b = gsl_vector_get(v, 2);
913
- for (i = 0; i < x->size; i++) {
914
- xi = gsl_vector_get(x, i);
915
- if (w) wi = gsl_vector_get(w, i);
916
- else wi = 1.0;
917
- yi = gsl_vector_get(y, i);
918
- gsl_vector_set(f, i, (A*exp(-b*xi) + y0 - yi)*wi);
919
- }
920
- return GSL_SUCCESS;
921
- }
922
-
923
- static int Exponential_df(const gsl_vector *v, void *data, gsl_matrix *J)
924
- {
925
- double A, b, xi, yy, wi;
926
- size_t i;
927
- struct fitting_xydata *xydata;
928
- gsl_vector *x, *w;
929
- xydata = (struct fitting_xydata*) data;
930
- x = xydata->x;
931
- w = xydata->w;
932
- A = gsl_vector_get(v, 1);
933
- b = gsl_vector_get(v, 2);
934
- for (i = 0; i < x->size; i++) {
935
- xi = gsl_vector_get(x, i);
936
- if (w) wi = gsl_vector_get(w, i);
937
- else wi = 1.0;
938
- yy = exp(-xi*b);
939
- gsl_matrix_set(J, i, 0, 1.0*wi);
940
- gsl_matrix_set(J, i, 1, yy*wi);
941
- gsl_matrix_set(J, i, 2, -A*yy*xi*wi);
942
- }
943
- return GSL_SUCCESS;
944
- }
945
-
946
- static int Exponential_fdf(const gsl_vector *v, void *data,
947
- gsl_vector *f, gsl_matrix *J)
948
- {
949
- Exponential_f(v, data, f);
950
- Exponential_df(v, data, J);
951
- return GSL_SUCCESS;
952
- }
953
-
954
-
955
- /* Double Exponential fit
956
- y = y0 + A1 exp(-b1 x) + A2 exp(-b2 x)
957
- v[0] = y0
958
- v[1] = A1
959
- v[2] = b1
960
- v[3] = A2
961
- v[4] = b2
962
- */
963
- static int DblExponential_f(const gsl_vector *v, void *data, gsl_vector *f)
964
- {
965
- gsl_vector *x, *y, *w;
966
- double y0, A1, b1, A2, b2, xi, yi, wi;
967
- size_t i;
968
- struct fitting_xydata *xydata;
969
- xydata = (struct fitting_xydata*) data;
970
- x = xydata->x;
971
- y = xydata->y;
972
- w = xydata->w;
973
- y0 = gsl_vector_get(v, 0);
974
- A1 = gsl_vector_get(v, 1);
975
- b1 = gsl_vector_get(v, 2);
976
- A2 = gsl_vector_get(v, 3);
977
- b2 = gsl_vector_get(v, 4);
978
- for (i = 0; i < x->size; i++) {
979
- xi = gsl_vector_get(x, i);
980
- if (w) wi = gsl_vector_get(w, i);
981
- else wi = 1.0;
982
- yi = gsl_vector_get(y, i);
983
- gsl_vector_set(f, i, (A1*exp(-b1*xi) + A2*exp(-b2*xi) + y0 - yi)*wi);
984
- }
985
- return GSL_SUCCESS;
986
- }
987
-
988
- static int DblExponential_df(const gsl_vector *v, void *data, gsl_matrix *J)
989
- {
990
- double A1, b1, A2, b2, xi, yy1, yy2, wi;
991
- size_t i;
992
- struct fitting_xydata *xydata;
993
- gsl_vector *x, *w;
994
- xydata = (struct fitting_xydata*) data;
995
- x = xydata->x;
996
- w = xydata->w;
997
- A1 = gsl_vector_get(v, 1);
998
- b1 = gsl_vector_get(v, 2);
999
- A2 = gsl_vector_get(v, 3);
1000
- b2 = gsl_vector_get(v, 4);
1001
- for (i = 0; i < x->size; i++) {
1002
- xi = gsl_vector_get(x, i);
1003
- if (w) wi = gsl_vector_get(w, i);
1004
- else wi = 1.0;
1005
- yy1 = exp(-xi*b1);
1006
- yy2 = exp(-xi*b2);
1007
- gsl_matrix_set(J, i, 0, 1.0*wi);
1008
- gsl_matrix_set(J, i, 1, yy1*wi);
1009
- gsl_matrix_set(J, i, 2, -A1*yy1*xi*wi);
1010
- gsl_matrix_set(J, i, 3, yy2*wi);
1011
- gsl_matrix_set(J, i, 4, -A2*yy2*xi*wi);
1012
- }
1013
- return GSL_SUCCESS;
1014
- }
1015
-
1016
- static int DblExponential_fdf(const gsl_vector *v, void *data,
1017
- gsl_vector *f, gsl_matrix *J)
1018
- {
1019
- DblExponential_f(v, data, f);
1020
- DblExponential_df(v, data, J);
1021
- return GSL_SUCCESS;
1022
- }
1023
-
1024
- /* Lorentzian fit
1025
- y = y0 + A/((x-x0)^2 + B)
1026
- v[0] = y0
1027
- v[1] = A
1028
- v[2] = x0
1029
- v[3] = B
1030
- */
1031
- static int Lorentzian_f(const gsl_vector *v, void *data, gsl_vector *f)
1032
- {
1033
- gsl_vector *x, *y, *w;
1034
- double y0, A, x0, B, xi, yi, wi;
1035
- size_t i;
1036
- struct fitting_xydata *xydata;
1037
- xydata = (struct fitting_xydata*) data;
1038
- x = xydata->x;
1039
- y = xydata->y;
1040
- w = xydata->w;
1041
- y0 = gsl_vector_get(v, 0);
1042
- A = gsl_vector_get(v, 1);
1043
- x0 = gsl_vector_get(v, 2);
1044
- B = gsl_vector_get(v, 3);
1045
- for (i = 0; i < x->size; i++) {
1046
- xi = gsl_vector_get(x, i);
1047
- if (w) wi = gsl_vector_get(w, i);
1048
- else wi = 1.0;
1049
- yi = gsl_vector_get(y, i);
1050
- gsl_vector_set(f, i, (A/(gsl_pow_2(xi-x0)+B) + y0 - yi)*wi);
1051
- }
1052
- return GSL_SUCCESS;
1053
- }
1054
-
1055
- static int Lorentzian_df(const gsl_vector *v, void *data, gsl_matrix *J)
1056
- {
1057
- double A, B, x0, xi, yy, wi;
1058
- size_t i;
1059
- struct fitting_xydata *xydata;
1060
- gsl_vector *x, *w;
1061
- xydata = (struct fitting_xydata*) data;
1062
- x = xydata->x;
1063
- w = xydata->w;
1064
- A = gsl_vector_get(v, 1);
1065
- x0 = gsl_vector_get(v, 2);
1066
- B = gsl_vector_get(v, 3);
1067
- for (i = 0; i < x->size; i++) {
1068
- xi = gsl_vector_get(x, i);
1069
- if (w) wi = gsl_vector_get(w, i);
1070
- else wi = 1.0;
1071
- yy = gsl_pow_2(xi-x0)+B;
1072
- gsl_matrix_set(J, i, 0, 1.0*wi);
1073
- gsl_matrix_set(J, i, 1, 1.0/yy*wi);
1074
- gsl_matrix_set(J, i, 2, 2.0*A*(xi-x0)/yy/yy*wi);
1075
- gsl_matrix_set(J, i, 3, -A/yy/yy*wi);
1076
- }
1077
- return GSL_SUCCESS;
1078
- }
1079
-
1080
- static int Lorentzian_fdf(const gsl_vector *v, void *data,
1081
- gsl_vector *f, gsl_matrix *J)
1082
- {
1083
- Lorentzian_f(v, data, f);
1084
- Lorentzian_df(v, data, J);
1085
- return GSL_SUCCESS;
1086
- }
1087
-
1088
- /* Sinusoldal fit
1089
- y = y0 + A sin(fc x + phi)
1090
- v[0] = y0
1091
- v[1] = A
1092
- v[2] = fc
1093
- v[3] = phi
1094
- */
1095
- static int Sin_f(const gsl_vector *v, void *data, gsl_vector *f)
1096
- {
1097
- gsl_vector *x, *y, *w;
1098
- double y0, A, fc, phi, xi, yi, wi;
1099
- size_t i;
1100
- struct fitting_xydata *xydata;
1101
- xydata = (struct fitting_xydata*) data;
1102
- x = xydata->x;
1103
- y = xydata->y;
1104
- w = xydata->w;
1105
- y0 = gsl_vector_get(v, 0);
1106
- A = gsl_vector_get(v, 1);
1107
- fc = gsl_vector_get(v, 2);
1108
- phi = gsl_vector_get(v, 3);
1109
- for (i = 0; i < x->size; i++) {
1110
- xi = gsl_vector_get(x, i);
1111
- if (w) wi = gsl_vector_get(w, i);
1112
- else wi = 1.0;
1113
- yi = gsl_vector_get(y, i);
1114
- gsl_vector_set(f, i, (A*sin(fc*xi+phi) + y0 - yi)*wi);
1115
- }
1116
- return GSL_SUCCESS;
1117
- }
1118
-
1119
- static int Sin_df(const gsl_vector *v, void *data, gsl_matrix *J)
1120
- {
1121
- double A, fc, phi, xi, ys, yc, wi;
1122
- size_t i;
1123
- struct fitting_xydata *xydata;
1124
- gsl_vector *x, *w;
1125
- xydata = (struct fitting_xydata*) data;
1126
- x = xydata->x;
1127
- w = xydata->w;
1128
- A = gsl_vector_get(v, 1);
1129
- fc = gsl_vector_get(v, 2);
1130
- phi = gsl_vector_get(v, 3);
1131
- for (i = 0; i < x->size; i++) {
1132
- xi = gsl_vector_get(x, i);
1133
- if (w) wi = gsl_vector_get(w, i);
1134
- else wi = 1.0;
1135
- ys = sin(fc*xi + phi);
1136
- yc = cos(fc*xi + phi);
1137
- gsl_matrix_set(J, i, 0, 1.0*wi);
1138
- gsl_matrix_set(J, i, 1, ys*wi);
1139
- gsl_matrix_set(J, i, 2, A*yc*xi*wi);
1140
- gsl_matrix_set(J, i, 3, A*yc*wi);
1141
- }
1142
- return GSL_SUCCESS;
1143
- }
1144
-
1145
- static int Sin_fdf(const gsl_vector *v, void *data,
1146
- gsl_vector *f, gsl_matrix *J)
1147
- {
1148
- Sin_f(v, data, f);
1149
- Sin_df(v, data, J);
1150
- return GSL_SUCCESS;
1151
- }
1152
-
1153
- /* Hill's equation fit
1154
- y = y0 + (m - y0)/(1 + (xhalf/x)^r)
1155
- v[0] = y0
1156
- v[1] = m
1157
- v[2] = xhalf
1158
- v[3] = r
1159
- */
1160
- static int Hill_f(const gsl_vector *v, void *data, gsl_vector *f)
1161
- {
1162
- gsl_vector *x, *y, *w;
1163
- double y0, m, xhalf, r, xi, yi, wi;
1164
- size_t i;
1165
- struct fitting_xydata *xydata;
1166
- xydata = (struct fitting_xydata*) data;
1167
- x = xydata->x;
1168
- y = xydata->y;
1169
- w = xydata->w;
1170
- y0 = gsl_vector_get(v, 0);
1171
- m = gsl_vector_get(v, 1);
1172
- xhalf = gsl_vector_get(v, 2);
1173
- r = gsl_vector_get(v, 3);
1174
- for (i = 0; i < x->size; i++) {
1175
- xi = gsl_vector_get(x, i);
1176
- if (w) wi = gsl_vector_get(w, i);
1177
- else wi = 1.0;
1178
- yi = gsl_vector_get(y, i);
1179
- gsl_vector_set(f, i, ((m-y0)/(1.0+pow(xhalf/xi, r)) + y0 - yi)*wi);
1180
- }
1181
- return GSL_SUCCESS;
1182
- }
1183
-
1184
- static int Hill_df(const gsl_vector *v, void *data, gsl_matrix *J)
1185
- {
1186
- double y0, m, xhalf, r, yy, xi, wi, a;
1187
- size_t i;
1188
- struct fitting_xydata *xydata;
1189
- gsl_vector *x, *w;
1190
- xydata = (struct fitting_xydata*) data;
1191
- x = xydata->x;
1192
- w = xydata->w;
1193
- y0 = gsl_vector_get(v, 0);
1194
- m = gsl_vector_get(v, 1);
1195
- xhalf = gsl_vector_get(v, 2);
1196
- r = gsl_vector_get(v, 3);
1197
- for (i = 0; i < x->size; i++) {
1198
- xi = gsl_vector_get(x, i);
1199
- if (w) wi = gsl_vector_get(w, i);
1200
- else wi = 1.0;
1201
- a = pow(xhalf/xi, r);
1202
- yy = (1.0 + a);
1203
- gsl_matrix_set(J, i, 0, (1.0 - 1.0/yy)*wi);
1204
- gsl_matrix_set(J, i, 1, 1.0/yy*wi);
1205
- gsl_matrix_set(J, i, 2, -(m-y0)*r/xhalf*a/yy/yy*wi);
1206
- gsl_matrix_set(J, i, 3, -(m-y0)/yy/yy*a*log(xhalf/xi)*wi);
1207
- }
1208
- return GSL_SUCCESS;
1209
- }
1210
-
1211
- static int Hill_fdf(const gsl_vector *v, void *data,
1212
- gsl_vector *f, gsl_matrix *J)
1213
- {
1214
- Hill_f(v, data, f);
1215
- Hill_df(v, data, J);
1216
- return GSL_SUCCESS;
1217
- }
1218
-
1219
- /* Sigmoidal fit
1220
- y = y0 + m/(1 + exp((x0-x)/r))
1221
- v[0] = y0
1222
- v[1] = m
1223
- v[2] = x0
1224
- v[3] = r
1225
- */
1226
- static int Sigmoid_f(const gsl_vector *v, void *data, gsl_vector *f)
1227
- {
1228
- gsl_vector *x, *y, *w;
1229
- double y0, m, x0, r, xi, yi, wi;
1230
- size_t i;
1231
- struct fitting_xydata *xydata;
1232
- xydata = (struct fitting_xydata*) data;
1233
- x = xydata->x;
1234
- y = xydata->y;
1235
- w = xydata->w;
1236
- y0 = gsl_vector_get(v, 0);
1237
- m = gsl_vector_get(v, 1);
1238
- x0 = gsl_vector_get(v, 2);
1239
- r = gsl_vector_get(v, 3);
1240
- for (i = 0; i < x->size; i++) {
1241
- xi = gsl_vector_get(x, i);
1242
- if (w) wi = gsl_vector_get(w, i);
1243
- else wi = 1.0;
1244
- yi = gsl_vector_get(y, i);
1245
- gsl_vector_set(f, i, (m/(1.0+exp((x0-xi)/r)) + y0 - yi)*wi);
1246
- }
1247
- return GSL_SUCCESS;
1248
- }
1249
-
1250
- static int Sigmoid_df(const gsl_vector *v, void *data, gsl_matrix *J)
1251
- {
1252
- double m, x0, r, xi, wi, a, yy;
1253
- size_t i;
1254
- struct fitting_xydata *xydata;
1255
- gsl_vector *x, *w;
1256
- xydata = (struct fitting_xydata*) data;
1257
- x = xydata->x;
1258
- w = xydata->w;
1259
- m = gsl_vector_get(v, 1);
1260
- x0 = gsl_vector_get(v, 2);
1261
- r = gsl_vector_get(v, 3);
1262
- for (i = 0; i < x->size; i++) {
1263
- xi = gsl_vector_get(x, i);
1264
- if (w) wi = gsl_vector_get(w, i);
1265
- else wi = 1.0;
1266
- a = exp((x0 - xi)/r);
1267
- yy = 1.0 + a;
1268
- gsl_matrix_set(J, i, 0, wi);
1269
- gsl_matrix_set(J, i, 1, 1.0/yy*wi);
1270
- gsl_matrix_set(J, i, 2, -m*a/r/yy/yy*wi);
1271
- gsl_matrix_set(J, i, 3, m*a*(x0-xi)/r/r/yy/yy*wi);
1272
- }
1273
- return GSL_SUCCESS;
1274
- }
1275
-
1276
- static int Sigmoid_fdf(const gsl_vector *v, void *data,
1277
- gsl_vector *f, gsl_matrix *J)
1278
- {
1279
- Sigmoid_f(v, data, f);
1280
- Sigmoid_df(v, data, J);
1281
- return GSL_SUCCESS;
1282
- }
1283
-
1284
-
1285
- /* Power-law fit
1286
- y = y0 + A x^r
1287
- v[0] = y0
1288
- v[1] = A
1289
- v[2] = r
1290
- */
1291
- static int Power_f(const gsl_vector *v, void *data, gsl_vector *f)
1292
- {
1293
- gsl_vector *x, *y, *w;
1294
- double y0, A, r, xi, yi, wi;
1295
- size_t i;
1296
- struct fitting_xydata *xydata;
1297
- xydata = (struct fitting_xydata*) data;
1298
- x = xydata->x;
1299
- y = xydata->y;
1300
- w = xydata->w;
1301
- y0 = gsl_vector_get(v, 0);
1302
- A = gsl_vector_get(v, 1);
1303
- r = gsl_vector_get(v, 2);
1304
- for (i = 0; i < x->size; i++) {
1305
- xi = gsl_vector_get(x, i);
1306
- if (w) wi = gsl_vector_get(w, i);
1307
- else wi = 1.0;
1308
- yi = gsl_vector_get(y, i);
1309
- gsl_vector_set(f, i, (A*pow(xi, r) + y0 - yi)*wi);
1310
- }
1311
- return GSL_SUCCESS;
1312
- }
1313
-
1314
- static int Power_df(const gsl_vector *v, void *data, gsl_matrix *J)
1315
- {
1316
- double A, r, xi, wi, a;
1317
- size_t i;
1318
- struct fitting_xydata *xydata;
1319
- gsl_vector *x, *w;
1320
- xydata = (struct fitting_xydata*) data;
1321
- x = xydata->x;
1322
- w = xydata->w;
1323
- A = gsl_vector_get(v, 1);
1324
- r = gsl_vector_get(v, 2);
1325
- for (i = 0; i < x->size; i++) {
1326
- xi = gsl_vector_get(x, i);
1327
- if (w) wi = gsl_vector_get(w, i);
1328
- else wi = 1.0;
1329
- a = pow(xi, r);
1330
- gsl_matrix_set(J, i, 0, wi);
1331
- gsl_matrix_set(J, i, 1, a*wi);
1332
- gsl_matrix_set(J, i, 2, A*a*log(xi)*wi);
1333
-
1334
- }
1335
- return GSL_SUCCESS;
1336
- }
1337
-
1338
- static int Power_fdf(const gsl_vector *v, void *data,
1339
- gsl_vector *f, gsl_matrix *J)
1340
- {
1341
- Power_f(v, data, f);
1342
- Power_df(v, data, J);
1343
- return GSL_SUCCESS;
1344
- }
1345
-
1346
-
1347
- /* Lognormal fit
1348
- y = y0 + A exp[ -(log(x/x0)/width)^2 ]
1349
- v[0] = y0
1350
- v[1] = A
1351
- v[2] = x0
1352
- v[3] = width
1353
- */
1354
- static int Lognormal_f(const gsl_vector *v, void *data, gsl_vector *f)
1355
- {
1356
- gsl_vector *x, *y, *w;
1357
- double y0, A, x0, width, xi, yi, wi;
1358
- size_t i;
1359
- struct fitting_xydata *xydata;
1360
- xydata = (struct fitting_xydata*) data;
1361
- x = xydata->x;
1362
- y = xydata->y;
1363
- w = xydata->w;
1364
- y0 = gsl_vector_get(v, 0);
1365
- A = gsl_vector_get(v, 1);
1366
- x0 = gsl_vector_get(v, 2);
1367
- width = gsl_vector_get(v, 3);
1368
- for (i = 0; i < x->size; i++) {
1369
- xi = gsl_vector_get(x, i);
1370
- if (w) wi = gsl_vector_get(w, i);
1371
- else wi = 1.0;
1372
- yi = gsl_vector_get(y, i);
1373
- gsl_vector_set(f, i, (A*exp(-gsl_pow_2(log(xi/x0)/width)) + y0 - yi)*wi);
1374
- }
1375
- return GSL_SUCCESS;
1376
- }
1377
-
1378
- static int Lognormal_df(const gsl_vector *v, void *data, gsl_matrix *J)
1379
- {
1380
- double A, x0, width, xi, wi, a, b;
1381
- size_t i;
1382
- struct fitting_xydata *xydata;
1383
- gsl_vector *x, *w;
1384
- xydata = (struct fitting_xydata*) data;
1385
- x = xydata->x;
1386
- w = xydata->w;
1387
- A = gsl_vector_get(v, 1);
1388
- x0 = gsl_vector_get(v, 2);
1389
- width = gsl_vector_get(v, 3);
1390
- for (i = 0; i < x->size; i++) {
1391
- xi = gsl_vector_get(x, i);
1392
- if (w) wi = gsl_vector_get(w, i);
1393
- else wi = 1.0;
1394
- a = log(xi/x0)/width;
1395
- b = exp(-a*a);
1396
- gsl_matrix_set(J, i, 0, wi);
1397
- gsl_matrix_set(J, i, 1, b*wi);
1398
- gsl_matrix_set(J, i, 2, 2.0*A*b*a*a*a/width/x0*wi);
1399
- gsl_matrix_set(J, i, 3, 2.0*A*b*a*a*a*a/width*wi);
1400
- }
1401
- return GSL_SUCCESS;
1402
- }
1403
-
1404
- static int Lognormal_fdf(const gsl_vector *v, void *data,
1405
- gsl_vector *f, gsl_matrix *J)
1406
- {
1407
- Lognormal_f(v, data, f);
1408
- Lognormal_df(v, data, J);
1409
- return GSL_SUCCESS;
1410
- }
1411
-
1412
- /* Rayleigh fit
1413
- y = A exp(-x*x/2/var)
1414
- v[0] = A
1415
- v[1] = var = sigma^2
1416
- */
1417
- static int Rayleigh_f(const gsl_vector *v, void *data, gsl_vector *f)
1418
- {
1419
- gsl_vector *x, *y, *w;
1420
- double A, var, xi, yi, wi;
1421
- size_t i;
1422
- struct fitting_xydata *xydata;
1423
- xydata = (struct fitting_xydata*) data;
1424
- x = xydata->x;
1425
- y = xydata->y;
1426
- w = xydata->w;
1427
- var = gsl_vector_get(v, 1);
1428
- A = gsl_vector_get(v, 0);
1429
- for (i = 0; i < x->size; i++) {
1430
- xi = gsl_vector_get(x, i);
1431
- yi = gsl_vector_get(y, i);
1432
- if (w) wi = gsl_vector_get(w, i);
1433
- else wi = 1.0;
1434
- gsl_vector_set(f, i, (A*xi*exp(-xi*xi/var/2.0) - yi)*wi);
1435
- }
1436
- return GSL_SUCCESS;
1437
- }
1438
-
1439
- static int Rayleigh_df(const gsl_vector *v, void *data, gsl_matrix *J)
1440
- {
1441
- double A, var, xi, yy, wi;
1442
- size_t i;
1443
- struct fitting_xydata *xydata;
1444
- gsl_vector *x, *w;
1445
- xydata = (struct fitting_xydata*) data;
1446
- x = xydata->x;
1447
- w = xydata->w;
1448
- var = gsl_vector_get(v, 1);
1449
- A = gsl_vector_get(v, 0);
1450
- for (i = 0; i < x->size; i++) {
1451
- xi = gsl_vector_get(x, i);
1452
- if (w) wi = gsl_vector_get(w, i);
1453
- else wi = 1.0;
1454
- yy = xi*exp(-xi*xi/var/2.0);
1455
- gsl_matrix_set(J, i, 1, A*yy*xi*xi/2/var/var*wi);
1456
- gsl_matrix_set(J, i, 0, yy*wi);
1457
- }
1458
- return GSL_SUCCESS;
1459
- }
1460
-
1461
- static int Rayleigh_fdf(const gsl_vector *v, void *data,
1462
- gsl_vector *f, gsl_matrix *J)
1463
- {
1464
- Rayleigh_f(v, data, f);
1465
- Rayleigh_df(v, data, J);
1466
- return GSL_SUCCESS;
1467
- }
1468
-
1469
- static void set_fittype(gsl_multifit_function_fdf *f, const char *fittype, size_t *p, gsl_vector **v, int *flag)
1470
- {
1471
- if (str_tail_grep(fittype, "aussian_2peaks") == 0) {
1472
- f->f = Gaussian_2peaks_f;
1473
- f->df = Gaussian_2peaks_df;
1474
- f->fdf = Gaussian_2peaks_fdf;
1475
- *p = 7;
1476
- if (*v == NULL) {
1477
- *v = gsl_vector_alloc(*p);
1478
- gsl_vector_set(*v, 0, 0); /* y0 = 0 */
1479
- gsl_vector_set(*v, 1, 1); /* A = 1 */
1480
- gsl_vector_set(*v, 2, 0.0); /* x0 = 0 */
1481
- gsl_vector_set(*v, 3, 1); /* initial values, var = 1 */
1482
- gsl_vector_set(*v, 4, 1); /* A = 1 */
1483
- gsl_vector_set(*v, 5, 1.0); /* x0 = 1 */
1484
- gsl_vector_set(*v, 6, 1); /* initial values, var = 1 */
1485
- *flag = 1;
1486
- }
1487
- } else if (str_head_grep(fittype, "gaus") == 0) {
1488
- f->f = Gaussian_f;
1489
- f->df = Gaussian_df;
1490
- f->fdf = Gaussian_fdf;
1491
- *p = 4;
1492
- if (*v == NULL) {
1493
- *v = gsl_vector_alloc(*p);
1494
- gsl_vector_set(*v, 3, 1); /* initial values, var = 1 */
1495
- gsl_vector_set(*v, 2, 0.0); /* x0 = 0 */
1496
- gsl_vector_set(*v, 1, 1); /* A = 1 */
1497
- gsl_vector_set(*v, 0, 0); /* y0 = 0 */
1498
- *flag = 1;
1499
- }
1500
- } else if (str_head_grep(fittype, "exp") == 0) {
1501
- f->f = Exponential_f;
1502
- f->df = Exponential_df;
1503
- f->fdf = Exponential_fdf;
1504
- *p = 3;
1505
- if (*v == NULL) {
1506
- *v = gsl_vector_alloc(*p);
1507
- gsl_vector_set(*v, 0, 0); /* y0 = 0 */
1508
- gsl_vector_set(*v, 1, 1); /* A = 1 */
1509
- gsl_vector_set(*v, 2, 1);
1510
- *flag = 1;
1511
- }
1512
- } else if (str_head_grep(fittype, "rayleigh") == 0) {
1513
- f->f = Rayleigh_f;
1514
- f->df = Rayleigh_df;
1515
- f->fdf = Rayleigh_fdf;
1516
- *p = 2;
1517
- if (*v == NULL) {
1518
- *v = gsl_vector_alloc(*p);
1519
- gsl_vector_set(*v, 0, 1); /* A = 1 */
1520
- gsl_vector_set(*v, 1, 1); /* sigma = 1 */
1521
- *flag = 1;
1522
- }
1523
- } else if (str_head_grep(fittype, "dblexp") == 0) {
1524
- f->f = DblExponential_f;
1525
- f->df = DblExponential_df;
1526
- f->fdf = DblExponential_fdf;
1527
- *p = 5;
1528
- if (*v == NULL) {
1529
- *v = gsl_vector_alloc(*p);
1530
- gsl_vector_set(*v, 0, 0); /* y0 = 0 */
1531
- gsl_vector_set(*v, 1, 1); /* A = 1 */
1532
- gsl_vector_set(*v, 2, 1);
1533
- gsl_vector_set(*v, 3, 1); /* A = 1 */
1534
- gsl_vector_set(*v, 4, 1);
1535
- *flag = 1;
1536
- }
1537
- } else if (str_head_grep(fittype, "lor") == 0) {
1538
- f->f = Lorentzian_f;
1539
- f->df = Lorentzian_df;
1540
- f->fdf = Lorentzian_fdf;
1541
- *p = 4;
1542
- if (*v == NULL) {
1543
- *v = gsl_vector_alloc(*p);
1544
- gsl_vector_set(*v, 0, 0);
1545
- gsl_vector_set(*v, 1, 1);
1546
- gsl_vector_set(*v, 2, 0);
1547
- gsl_vector_set(*v, 3, 1);
1548
- *flag = 1;
1549
- }
1550
- } else if (str_head_grep(fittype, "sin") == 0) {
1551
- f->f = Sin_f;
1552
- f->df = Sin_df;
1553
- f->fdf = Sin_fdf;
1554
- *p = 4;
1555
- if (*v == NULL) {
1556
- *v = gsl_vector_alloc(*p);
1557
- gsl_vector_set(*v, 0, 0);
1558
- gsl_vector_set(*v, 1, 1);
1559
- gsl_vector_set(*v, 2, 1);
1560
- gsl_vector_set(*v, 3, 0);
1561
- *flag = 1;
1562
- }
1563
- } else if (str_head_grep(fittype, "hill") == 0) {
1564
- f->f = Hill_f;
1565
- f->df = Hill_df;
1566
- f->fdf = Hill_fdf;
1567
- *p = 4;
1568
- if (*v == NULL) {
1569
- *v = gsl_vector_alloc(*p);
1570
- gsl_vector_set(*v, 0, 0);
1571
- gsl_vector_set(*v, 1, 1);
1572
- gsl_vector_set(*v, 2, 1);
1573
- gsl_vector_set(*v, 3, 1);
1574
- *flag = 1;
1575
- }
1576
- } else if (str_head_grep(fittype, "sigmoid") == 0 || str_head_grep(fittype, "fermi") == 0) {
1577
- f->f = Sigmoid_f;
1578
- f->df = Sigmoid_df;
1579
- f->fdf = Sigmoid_fdf;
1580
- *p = 4;
1581
- if (*v == NULL) {
1582
- *v = gsl_vector_alloc(*p);
1583
- gsl_vector_set(*v, 0, 0);
1584
- gsl_vector_set(*v, 1, 1);
1585
- gsl_vector_set(*v, 2, 0);
1586
- gsl_vector_set(*v, 3, 1);
1587
- *flag = 1;
1588
- }
1589
- } else if (str_head_grep(fittype, "power") == 0) {
1590
- f->f = Power_f;
1591
- f->df = Power_df;
1592
- f->fdf = Power_fdf;
1593
- *p = 3;
1594
- if (*v == NULL) {
1595
- *v = gsl_vector_alloc(*p);
1596
- gsl_vector_set(*v, 0, 0);
1597
- gsl_vector_set(*v, 1, 1);
1598
- gsl_vector_set(*v, 2, -1);
1599
- *flag = 1;
1600
- }
1601
- } else if (str_head_grep(fittype, "lognormal") == 0) {
1602
- f->f = Lognormal_f;
1603
- f->df = Lognormal_df;
1604
- f->fdf = Lognormal_fdf;
1605
- *p = 4;
1606
- if (*v == NULL) {
1607
- *v = gsl_vector_alloc(*p);
1608
- gsl_vector_set(*v, 0, 0);
1609
- gsl_vector_set(*v, 1, 1);
1610
- gsl_vector_set(*v, 2, 1);
1611
- gsl_vector_set(*v, 3, 1);
1612
- *flag = 1;
1613
- }
1614
- } else {
1615
- rb_raise(rb_eRuntimeError, "Unknown fit type (gaussian expected)");
1616
- }
1617
- }
1618
-
1619
- /* Singleton method */
1620
- static VALUE rb_gsl_multifit_fit(int argc, VALUE *argv, VALUE klass)
1621
- {
1622
- const gsl_multifit_fdfsolver_type *T;
1623
- gsl_multifit_fdfsolver *solver;
1624
- int status;
1625
- size_t iter = 0, i;
1626
- size_t n, dof; /* # of data points */
1627
- size_t p; /* # of fitting parameters */
1628
- gsl_multifit_function_fdf f;
1629
- gsl_matrix *covar = NULL;
1630
- gsl_vector *v = NULL;
1631
- gsl_vector *x, *y, *w = NULL;
1632
- gsl_vector_view xx, yy, ww;
1633
- gsl_vector *vout, *verr;
1634
- int flag = 0;
1635
- double chi2;
1636
- char fittype[256];
1637
- struct fitting_xydata xydata;
1638
- if (argc < 3) rb_raise(rb_eArgError, "too few arguments");
1639
- switch (TYPE(argv[argc-1])) {
1640
- case T_ARRAY:
1641
- v = get_vector(argv[argc-1]);
1642
- flag = 1;
1643
- argc--;
1644
- break;
1645
- case T_STRING:
1646
- /* do nothing */
1647
- break;
1648
- default:
1649
- Data_Get_Vector(argv[argc-1], v);
1650
- flag = 0;
1651
- argc--;
1652
- break;
1653
- }
1654
- x = &xx.vector;
1655
- y = &yy.vector;
1656
- w = &ww.vector;
1657
- switch (argc) {
1658
- case 3:
1659
- Data_Get_Vector(argv[0], x);
1660
- Data_Get_Vector(argv[1], y);
1661
- w = NULL;
1662
- strcpy(fittype, STR2CSTR(argv[2]));
1663
- break;
1664
- case 4:
1665
- Data_Get_Vector(argv[0], x);
1666
- Data_Get_Vector(argv[1], w);
1667
- Data_Get_Vector(argv[2], y);
1668
- strcpy(fittype, STR2CSTR(argv[3]));
1669
- break;
1670
- default:
1671
- rb_raise(rb_eArgError, "wrong number of arguments");
1672
- break;
1673
- }
1674
-
1675
- xydata.x = x;
1676
- xydata.y = y;
1677
- xydata.w = w;
1678
- n = x->size;
1679
-
1680
- set_fittype(&f, fittype, &p, &v, &flag);
1681
-
1682
- f.n = n;
1683
- f.p = p;
1684
- f.params = &xydata;
1685
-
1686
- T = gsl_multifit_fdfsolver_lmsder;
1687
- solver = gsl_multifit_fdfsolver_alloc(T, n, p);
1688
- gsl_multifit_fdfsolver_set(solver, &f, v);
1689
-
1690
- do {
1691
- iter++;
1692
- status = gsl_multifit_fdfsolver_iterate(solver);
1693
- if (status) break;
1694
- status = gsl_multifit_test_delta(solver->dx, solver->x, 1e-6, 1e-6);
1695
- } while (status == GSL_CONTINUE);
1696
- vout = gsl_vector_alloc(p);
1697
- verr = gsl_vector_alloc(p);
1698
- gsl_vector_memcpy(vout, solver->x);
1699
- covar = gsl_matrix_alloc(p, p);
1700
- chi2 = gsl_pow_2(gsl_blas_dnrm2(solver->f)); /* not reduced chi-square */
1701
- dof = n - p;
1702
- gsl_multifit_covar(solver->J, 0.0, covar);
1703
- for (i = 0; i < p; i++)
1704
- gsl_vector_set(verr, i, sqrt(chi2/dof*gsl_matrix_get(covar, i, i)));
1705
- gsl_matrix_free(covar);
1706
- if (flag == 1) gsl_vector_free(v);
1707
- gsl_multifit_fdfsolver_free(solver);
1708
- return rb_ary_new3(4,
1709
- Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, vout),
1710
- Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, verr),
1711
- rb_float_new(chi2), INT2FIX(dof));
1712
- }
1713
-
1714
- static VALUE rb_gsl_multifit_linear_est(VALUE module, VALUE xx, VALUE cc, VALUE ccov)
1715
- {
1716
- gsl_vector *x, *c;
1717
- gsl_matrix *cov;
1718
- double y, y_err;
1719
-
1720
- Data_Get_Vector(xx, x);
1721
- Data_Get_Vector(cc, c);
1722
- Data_Get_Matrix(ccov, cov);
1723
- gsl_multifit_linear_est(x, c, cov, &y, &y_err);
1724
- return rb_ary_new3(2, rb_float_new(y), rb_float_new(y_err));
1725
- }
1726
-
1727
- static VALUE rb_gsl_multifit_linear_residuals(int argc, VALUE argv[], VALUE module)
1728
- {
1729
- gsl_vector *y, *c, *r;
1730
- gsl_matrix *X;
1731
- VALUE ret;
1732
- switch (argc) {
1733
- case 3:
1734
- Data_Get_Matrix(argv[0], X);
1735
- Data_Get_Vector(argv[1], y);
1736
- Data_Get_Vector(argv[2], c);
1737
- r = gsl_vector_alloc(y->size);
1738
- ret = Data_Wrap_Struct(cgsl_vector, 0, gsl_vector_free, r);
1739
- break;
1740
- case 4:
1741
- Data_Get_Matrix(argv[0], X);
1742
- Data_Get_Vector(argv[1], y);
1743
- Data_Get_Vector(argv[2], c);
1744
- Data_Get_Vector(argv[3], r);
1745
- ret = argv[3];
1746
- break;
1747
- default:
1748
- rb_raise(rb_eArgError, "Wrong number of arguments %d (3 or 4).\n", argc);
1749
- }
1750
- gsl_multifit_linear_residuals(X, y, c, r);
1751
- return ret;
1752
- }
1753
-
1754
- void Init_gsl_multifit(VALUE module)
1755
- {
1756
- VALUE mgsl_multifit;
1757
- VALUE cgsl_multifit_fdfsolver;
1758
- VALUE cgsl_multifit_solver;
1759
-
1760
- mgsl_multifit = rb_define_module_under(module, "MultiFit");
1761
-
1762
- cgsl_multifit_workspace = rb_define_class_under(mgsl_multifit, "Workspace",
1763
- cGSL_Object);
1764
- rb_define_singleton_method(cgsl_multifit_workspace, "new",
1765
- rb_gsl_multifit_workspace_new, 2);
1766
- rb_define_singleton_method(cgsl_multifit_workspace, "alloc",
1767
- rb_gsl_multifit_workspace_new, 2);
1768
- rb_define_singleton_method(mgsl_multifit, "alloc",
1769
- rb_gsl_multifit_workspace_new, 2);
1770
- rb_define_module_function(mgsl_multifit, "linear", rb_gsl_multifit_linear, -1);
1771
- rb_define_module_function(mgsl_multifit, "wlinear", rb_gsl_multifit_wlinear, -1);
1772
-
1773
- cgsl_multifit_solver = rb_define_class_under(mgsl_multifit, "Solver", cGSL_Object);
1774
- cgsl_multifit_fdfsolver = rb_define_class_under(mgsl_multifit, "FdfSolver",
1775
- cgsl_multifit_solver);
1776
- cgsl_multifit_function_fdf = rb_define_class_under(mgsl_multifit, "Function_fdf",
1777
- cGSL_Object);
1778
-
1779
- /*****/
1780
-
1781
- rb_define_singleton_method(cgsl_multifit_fdfsolver, "new",
1782
- rb_gsl_multifit_fdfsolver_new, -1);
1783
- rb_define_singleton_method(cgsl_multifit_fdfsolver, "alloc",
1784
- rb_gsl_multifit_fdfsolver_new, -1);
1785
-
1786
- rb_define_singleton_method(cgsl_multifit_function_fdf, "new",
1787
- rb_gsl_multifit_function_fdf_new, -1);
1788
- rb_define_singleton_method(cgsl_multifit_function_fdf, "alloc",
1789
- rb_gsl_multifit_function_fdf_new, -1);
1790
-
1791
- /*****/
1792
-
1793
- rb_define_method(cgsl_multifit_fdfsolver, "set", rb_gsl_multifit_fdfsolver_set, 2);
1794
- rb_define_method(cgsl_multifit_fdfsolver, "name", rb_gsl_multifit_fdfsolver_name, 0);
1795
- rb_define_method(cgsl_multifit_fdfsolver, "iterate", rb_gsl_multifit_fdfsolver_iterate, 0);
1796
- rb_define_method(cgsl_multifit_fdfsolver, "position", rb_gsl_multifit_fdfsolver_position, 0);
1797
- // rb_define_alias(cgsl_multifit_fdfsolver, "x", "position");
1798
- rb_define_method(cgsl_multifit_fdfsolver, "print_state", rb_gsl_multifit_fdfsolver_print_state, 1);
1799
- rb_define_method(cgsl_multifit_fdfsolver, "fdf", rb_gsl_multifit_fdfsolver_fdf, 0);
1800
- rb_define_method(cgsl_multifit_fdfsolver, "test_delta", rb_gsl_multifit_fdfsolver_test_delta, 2);
1801
- rb_define_method(cgsl_multifit_fdfsolver, "test_gradient", rb_gsl_multifit_fdfsolver_test_gradient, -1);
1802
- rb_define_method(cgsl_multifit_fdfsolver, "covar", rb_gsl_multifit_fdfsolver_covar, -1);
1803
- rb_define_method(cgsl_multifit_fdfsolver, "gradient", rb_gsl_multifit_fdfsolver_gradient, -1);
1804
- rb_define_method(cgsl_multifit_fdfsolver, "x", rb_gsl_multifit_fdfsolver_x, 0);
1805
- rb_define_method(cgsl_multifit_fdfsolver, "dx", rb_gsl_multifit_fdfsolver_dx, 0);
1806
- rb_define_method(cgsl_multifit_fdfsolver, "f", rb_gsl_multifit_fdfsolver_f, 0);
1807
- rb_define_method(cgsl_multifit_fdfsolver, "J", rb_gsl_multifit_fdfsolver_J, 0);
1808
- rb_define_alias(cgsl_multifit_fdfsolver, "jac", "J");
1809
- rb_define_alias(cgsl_multifit_fdfsolver, "jacobian", "J");
1810
- rb_define_alias(cgsl_multifit_fdfsolver, "Jacobian", "J");
1811
-
1812
- /*****/
1813
- rb_define_module_function(mgsl_multifit, "polyfit", rb_gsl_multifit_polyfit, -1);
1814
- rb_define_module_function(mgsl_multifit, "legfit", rb_gsl_multifit_legfit, -1);
1815
- /*****/
1816
-
1817
- rb_define_singleton_method(mgsl_multifit, "test_delta", rb_gsl_multifit_test_delta, 4);
1818
- rb_define_singleton_method(mgsl_multifit, "test_gradient", rb_gsl_multifit_test_gradient, 2);
1819
- rb_define_singleton_method(mgsl_multifit, "gradient", rb_gsl_multifit_gradient, -1);
1820
- rb_define_singleton_method(mgsl_multifit, "covar", rb_gsl_multifit_covar, -1);
1821
-
1822
- rb_gsl_multifit_define_const(cgsl_multifit_fdfsolver);
1823
-
1824
- rb_define_method(cgsl_multifit_function_fdf, "set_procs",
1825
- rb_gsl_multifit_function_fdf_set_procs, -1);
1826
- rb_define_method(cgsl_multifit_function_fdf, "set_data",
1827
- rb_gsl_multifit_function_fdf_set_data, -1);
1828
- rb_define_method(cgsl_multifit_function_fdf, "params",
1829
- rb_gsl_multifit_function_fdf_params, 0);
1830
- rb_define_alias(cgsl_multifit_function_fdf, "param", "params");
1831
-
1832
- rb_define_method(cgsl_multifit_function_fdf, "n",
1833
- rb_gsl_multifit_function_fdf_n, 0);
1834
- rb_define_method(cgsl_multifit_function_fdf, "set_n",
1835
- rb_gsl_multifit_function_fdf_set_n, 1);
1836
- rb_define_alias(cgsl_multifit_function_fdf, "n=", "set_n");
1837
- rb_define_method(cgsl_multifit_function_fdf, "p",
1838
- rb_gsl_multifit_function_fdf_p, 0);
1839
- rb_define_alias(cgsl_multifit_function_fdf, "np", "p");
1840
-
1841
- /*****/
1842
- rb_define_singleton_method(cgsl_multifit_fdfsolver, "fit", rb_gsl_multifit_fit, -1);
1843
-
1844
- /***/
1845
- rb_define_module_function(mgsl_multifit, "linear_est", rb_gsl_multifit_linear_est, 3);
1846
- rb_define_module_function(module, "multifit_linear_est", rb_gsl_multifit_linear_est, 3);
1847
-
1848
- rb_define_module_function(mgsl_multifit, "linear_residuals", rb_gsl_multifit_linear_residuals, -1);
1849
- rb_define_module_function(module, "multifit_linear_residuals", rb_gsl_multifit_linear_residuals, -1);
1850
-
1851
- #ifdef HAVE_NDLINEAR_GSL_MULTIFIT_NDLINEAR_H
1852
- Init_ndlinear(mgsl_multifit);
1853
- #endif
1854
-
1855
- }
1856
-
1857
- #ifdef CHECK_WORKSPACE
1858
- #undef CHECK_WORKSPACE
1859
- #endif
1860
- #ifdef CHECK_MULTIFIT_FUNCTION_FDF
1861
- #undef CHECK_MULTIFIT_FUNCTION_FDF
1862
- #endif