plan_executor 1.0.2
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- checksums.yaml +7 -0
- data/.gitignore +44 -0
- data/.simplecov +16 -0
- data/.travis.yml +13 -0
- data/Gemfile +26 -0
- data/Gemfile.lock +197 -0
- data/LICENSE +201 -0
- data/README.md +126 -0
- data/Rakefile +25 -0
- data/fixtures/daf/conformance-daf-query-responder.xml +1471 -0
- data/fixtures/diagnostic_order/do-100.xml +64 -0
- data/fixtures/diagnostic_order/do-200.xml +121 -0
- data/fixtures/diagnostic_order/do-300.xml +91 -0
- data/fixtures/diagnostic_order/do-400.xml +88 -0
- data/fixtures/diagnostic_report/dr-100.xml +96 -0
- data/fixtures/diagnostic_report/dr-200.xml +125 -0
- data/fixtures/diagnostic_report/dr-300.xml +132 -0
- data/fixtures/diagnostic_report/dr-400.xml +121 -0
- data/fixtures/financial/claim-example-average.xml +168 -0
- data/fixtures/financial/claim-example-simple.xml +67 -0
- data/fixtures/observation/obs-100.xml +58 -0
- data/fixtures/observation/obs-101.xml +58 -0
- data/fixtures/observation/obs-200.xml +125 -0
- data/fixtures/observation/obs-300.xml +106 -0
- data/fixtures/observation/obs-301.xml +106 -0
- data/fixtures/observation/obs-302.xml +106 -0
- data/fixtures/observation/obs-303.xml +106 -0
- data/fixtures/observation/obs-304.xml +106 -0
- data/fixtures/observation/obs-400.xml +87 -0
- data/fixtures/observation/obs-401.xml +95 -0
- data/fixtures/observation/obs-402.xml +95 -0
- data/fixtures/observation/obs-403.xml +84 -0
- data/fixtures/observation/obs-404.xml +84 -0
- data/fixtures/observation/obs-405.xml +83 -0
- data/fixtures/observation/obs-406.xml +83 -0
- data/fixtures/observation/obs-407.xml +70 -0
- data/fixtures/observation/obs-408.xml +84 -0
- data/fixtures/observation/obs-uslab-example5.xml +102 -0
- data/fixtures/order/order-100.xml +61 -0
- data/fixtures/order/order-200.xml +61 -0
- data/fixtures/order/order-300.xml +61 -0
- data/fixtures/order/order-400.xml +61 -0
- data/fixtures/order_response/ordresp-100.xml +79 -0
- data/fixtures/order_response/ordresp-110.xml +79 -0
- data/fixtures/order_response/ordresp-200.xml +79 -0
- data/fixtures/order_response/ordresp-210.xml +79 -0
- data/fixtures/order_response/ordresp-300.xml +79 -0
- data/fixtures/order_response/ordresp-310.xml +79 -0
- data/fixtures/order_response/ordresp-400.xml +79 -0
- data/fixtures/order_response/ordresp-410.xml +79 -0
- data/fixtures/organization/org-uslab-example3.xml +49 -0
- data/fixtures/patient/patient-example-updated.xml +140 -0
- data/fixtures/patient/patient-example-us-extensions(us01).xml +81 -0
- data/fixtures/patient/patient-example.xml +132 -0
- data/fixtures/patient/patient-format-example.xml +101 -0
- data/fixtures/patient/patient-minimal.xml +9 -0
- data/fixtures/patient/patient-uslab-example1.xml +44 -0
- data/fixtures/practitioner/pract-uslab-example1.xml +18 -0
- data/fixtures/practitioner/pract-uslab-example3.xml +36 -0
- data/fixtures/record/condition-example-f201-fever.xml +63 -0
- data/fixtures/record/condition-example-f205-infection.xml +20 -0
- data/fixtures/record/diagnosticreport-example-f201-brainct.xml +18 -0
- data/fixtures/record/encounter-example-f201-20130404.xml +17 -0
- data/fixtures/record/encounter-example-f202-20130128.xml +17 -0
- data/fixtures/record/observation-example-f202-temperature.xml +60 -0
- data/fixtures/record/organization-example-f201-aumc.xml +5 -0
- data/fixtures/record/organization-example-f203-bumc.xml +5 -0
- data/fixtures/record/patient-example-f201-roel.xml +16 -0
- data/fixtures/record/practitioner-example-f201-ab.xml +14 -0
- data/fixtures/record/procedure-example-f201-tpf.xml +23 -0
- data/fixtures/scheduling/appointment-simple.xml +24 -0
- data/fixtures/scheduling/appointmentresponse-patient-simple.xml +12 -0
- data/fixtures/scheduling/appointmentresponse-practitioner-simple.xml +12 -0
- data/fixtures/scheduling/practitioner-simple.xml +10 -0
- data/fixtures/scheduling/schedule-simple.xml +12 -0
- data/fixtures/scheduling/slot-simple.xml +10 -0
- data/fixtures/specimen/spec-100.xml +65 -0
- data/fixtures/specimen/spec-400.xml +70 -0
- data/fixtures/specimen/spec-uslab-example1.xml +82 -0
- data/fixtures/validation/observation.profile.xml +2045 -0
- data/fixtures/validation/observations/observation-example(example).xml +50 -0
- data/lib/FHIR_structure.json +529 -0
- data/lib/daf_resource_generator.rb +94 -0
- data/lib/data/fhir_structure.rb +8 -0
- data/lib/data/resources.rb +138 -0
- data/lib/executor.rb +56 -0
- data/lib/ext/client.rb +27 -0
- data/lib/ext/client_reply.rb +19 -0
- data/lib/plan_executor.rb +31 -0
- data/lib/resource_generator.rb +656 -0
- data/lib/tasks/tasks.rake +329 -0
- data/lib/tasks/templates/summary.html.erb +163 -0
- data/lib/test_result.rb +69 -0
- data/lib/tests/assertions.rb +261 -0
- data/lib/tests/base_test.rb +117 -0
- data/lib/tests/suites/argonaut_resprint_1_test.rb +260 -0
- data/lib/tests/suites/argonaut_resprint_2_test.rb +369 -0
- data/lib/tests/suites/argonaut_resprint_3_test.rb +309 -0
- data/lib/tests/suites/argonaut_sprint_1_test.rb +187 -0
- data/lib/tests/suites/argonaut_sprint_2_test.rb +115 -0
- data/lib/tests/suites/argonaut_sprint_3_test.rb +208 -0
- data/lib/tests/suites/argonaut_sprint_4_test.rb +335 -0
- data/lib/tests/suites/argonaut_sprint_5_test.rb +196 -0
- data/lib/tests/suites/argonaut_sprint_6_test.rb +243 -0
- data/lib/tests/suites/argonaut_sprint_7_test.rb +161 -0
- data/lib/tests/suites/base_suite.rb +116 -0
- data/lib/tests/suites/connectathon_audit_track.rb +354 -0
- data/lib/tests/suites/connectathon_fetch_patient_record.rb +443 -0
- data/lib/tests/suites/connectathon_financial_track.rb +380 -0
- data/lib/tests/suites/connectathon_lab_order_track.rb +239 -0
- data/lib/tests/suites/connectathon_patient_track.rb +364 -0
- data/lib/tests/suites/connectathon_profile_validation.rb +101 -0
- data/lib/tests/suites/connectathon_scheduling_track.rb +266 -0
- data/lib/tests/suites/connectathon_terminology_track.rb +242 -0
- data/lib/tests/suites/daf_profiles_test.rb +431 -0
- data/lib/tests/suites/format_test.rb +453 -0
- data/lib/tests/suites/history_test.rb +311 -0
- data/lib/tests/suites/read_test.rb +104 -0
- data/lib/tests/suites/resource_test.rb +553 -0
- data/lib/tests/suites/search_test.rb +219 -0
- data/lib/tests/suites/search_test_robust.rb +172 -0
- data/lib/tests/suites/sprinkler_search_test.rb +660 -0
- data/lib/tests/suites/suite_engine.rb +114 -0
- data/lib/tests/suites/transaction_test.rb +571 -0
- data/lib/tests/testscripts/base_testscript.rb +480 -0
- data/lib/tests/testscripts/testscript_engine.rb +81 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track1-Patient/Client Assigned Id/track1-patient-base-client-id-json.xml +348 -0
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- data/lib/tests/testscripts/xml/Connectathon11/Track1-Patient/Client Assigned Id/track1-patient-bonus-client-id-json.xml +420 -0
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- data/lib/tests/testscripts/xml/Connectathon11/Track1-Patient/Server Assigned Id/track1-patient-base-server-id-json.xml +352 -0
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- data/lib/tests/testscripts/xml/Connectathon11/Track1-Patient/_reference/conformance/PatientConformance.xml +34 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track1-Patient/_reference/resources/patient-create-PeterChalmers-min.json +45 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track1-Patient/_reference/resources/patient-create-PeterChalmers-min.xml +26 -0
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- data/lib/tests/testscripts/xml/Connectathon11/Track11-SDC/_reference/C-CDA_R2-1_CCD-ussg.xml +3414 -0
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- data/lib/tests/testscripts/xml/Connectathon11/Track2-Terminology/Lookup/track2-ts-suite5-loinc-lookup-xml.xml +224 -0
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- data/lib/tests/testscripts/xml/Connectathon11/Track2-Terminology/README.html +85 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track2-Terminology/Translate/track2-ts-suite6-translate-xml.xml +224 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track2-Terminology/Validate-code/Client Assigned Id/track2-ts-suite3-validate-code-client-id.xml +1807 -0
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- data/lib/tests/testscripts/xml/Connectathon11/Track2-Terminology/_reference/conformance/ConceptMapSuite6Conformance.xml +11 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track2-Terminology/_reference/conformance/ValueSetSuite1Conformance.xml +17 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track2-Terminology/_reference/conformance/ValueSetSuite2Conformance.xml +17 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track2-Terminology/_reference/conformance/ValueSetSuite3Conformance.xml +14 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track2-Terminology/_reference/conformance/ValueSetSuite4Conformance.xml +14 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track2-Terminology/_reference/conformance/ValueSetSuite5Conformance.xml +11 -0
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- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/_reference/conformance/DecisionSupportServiceModule-Evaluate.xml +17 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-incomplete-request-payload.xml +26 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-incomplete-response-min-payload.xml +7 -0
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- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-malformed-request-payload.xml +28 -0
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- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-request-payload.xml +28 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-response-min-payload.xml +7 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-response-payload.xml +332 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-unauthorized-request-payload.xml +28 -0
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- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-unauthorized-response-payload.xml +8 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/gao-assessment-request-payload.xml +176 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/gao-assessment-response-payload-min.xml +32 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/gao-assessment-response-payload.xml +80 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/track3-cds-evaluate-cdc-immunization.xml +290 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/track3-cds-evaluate-gao-profile.xml +110 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track6-FHIR-Genomics/Client_Assigned_Id/TestScript_FHIR-Genomics.xml +170 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track6-FHIR-Genomics/_reference/resources/sequence-example-1.xml +31 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track6-FHIR-Genomics/_reference/resources/sequence-example-2.xml +31 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/Actors.png +0 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/Client_Assigned_Id/track7-laborder100-xml.xml +590 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/Client_Assigned_Id/track7-laborder200-xml.xml +587 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/Client_Assigned_Id/track7-laborder300-xml.xml +612 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/Client_Assigned_Id/track7-laborder400-xml.xml +635 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/Peer-to-Peer/track7-laborder100-peer2peer-xml.xml +752 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/Thumbs.db +0 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/conformance/LabOrderLabReport-CreateDeleteReadUpdate.xml +187 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/conformance/html.xslt +45 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticOrder/do-100-update.xml +64 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticOrder/do-100.xml +64 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticOrder/do-200-update.xml +121 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticOrder/do-200.xml +121 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticOrder/do-300-update.xml +91 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticOrder/do-300.xml +91 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticOrder/do-400-update.xml +88 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticOrder/do-400.xml +88 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticReport/dr-100.xml +96 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticReport/dr-200.xml +125 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticReport/dr-300.xml +132 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/DiagnosticReport/dr-400.xml +121 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-100.xml +58 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-101.xml +58 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-200.xml +125 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-300.xml +106 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-301.xml +106 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-302.xml +106 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-303.xml +106 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-304.xml +106 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-400.xml +87 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-401.xml +95 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-402.xml +95 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-403.xml +84 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-404.xml +84 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-405.xml +83 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-406.xml +83 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-407.xml +70 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-408.xml +84 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Observation/obs-uslab-example5.xml +102 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Order/order-100.xml +61 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Order/order-200.xml +61 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Order/order-300.xml +61 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Order/order-400.xml +61 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/OrderResponse/ordresp-100.xml +79 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/OrderResponse/ordresp-110.xml +79 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/OrderResponse/ordresp-200.xml +79 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/OrderResponse/ordresp-210.xml +79 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/OrderResponse/ordresp-300.xml +79 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/OrderResponse/ordresp-310.xml +79 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/OrderResponse/ordresp-400.xml +79 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/OrderResponse/ordresp-410.xml +79 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Organization/org-uslab-example3.xml +49 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Patient/patient-uslab-example1.xml +44 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Practitioner/pract-uslab-example1.xml +18 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Practitioner/pract-uslab-example3.xml +36 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Specimen/Thumbs.db +0 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Specimen/spec-100.xml +65 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Specimen/spec-400.xml +70 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Specimen/spec-uslab-example1.xml +82 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 1 Document.txt +122 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 2 Document.txt +103 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 3 Document.txt +201 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track7-LabOrderLabReport/_reference/resources/Testscript 4 Document.txt +310 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/conformance/MedicationStatementCreate.xml +11 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/conformance/PatientSearchType.xml +15 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/resources/medicationstatement-create.json +39 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/_reference/resources/medicationstatement-patch.json +3 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/track9-patch-medicationstatement-json-if-match.xml +321 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/track9-patch-medicationstatement-json.xml +303 -0
- data/lib/tests/testscripts/xml/Connectathon11/Track9-Patch/track9-patch-peer2peer-patient-json.xml +235 -0
- data/plan_executor.gemspec +14 -0
- data/test/fixtures/diagnostic_bundle.xml +51 -0
- data/test/fixtures/lab_results_bundle.xml +49 -0
- data/test/fixtures/observation_bundle.json +61 -0
- data/test/fixtures/testscript-example.xml +202 -0
- data/test/fixtures/testscript-history.xml +143 -0
- data/test/fixtures/testscript-readtest.xml +272 -0
- data/test/fixtures/testscript-search.xml +282 -0
- data/test/fixtures/testscript-update.xml +147 -0
- data/test/fixtures/vital_signs_bundle.xml +117 -0
- data/test/test_helper.rb +8 -0
- data/test/unit/argonaut_sprint6_test.rb +31 -0
- data/test/unit/argonaut_sprint7_test.rb +21 -0
- data/test/unit/basic_test.rb +27 -0
- data/test/unit/fetch_patient_record_test.rb +357 -0
- data/test/unit/financial_test.rb +41 -0
- data/test/unit/fixtures_test.rb +45 -0
- data/test/unit/metadata_test.rb +33 -0
- metadata +394 -0
@@ -0,0 +1,82 @@
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<?xml version="1.0" encoding="UTF-8"?>
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<Specimen xmlns="http://hl7.org/fhir">
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<id value="spec-uslab-example1"/>
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<text>
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<status value="generated"/>
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<div xmlns="http://www.w3.org/1999/xhtml">
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<p>
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<b>Generated Narrative with Details</b>
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</p>
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<p>
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<b>id</b>: spec-uslab-example1</p>
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<p>
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<b>identifier</b>: spec-200 (official)</p>
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<p>
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<b>type</b>: Blood sample
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<span style="background: LightGoldenRodYellow ">(Details : {SNOMED CT code "122555007" := "122555007", given as "Venous blood specimen"}; {http://lis.acmelabs.org/codes code "BLD" := "BLD", given as "Blood"})</span>
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</p>
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<p>
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<b>subject</b>:
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<a href="Patient/patient-uslab-example1">Todd Lerr</a>
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</p>
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<p>
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<b>accessionIdentifier</b>: 21041205000001 (official)</p>
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</div>
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</text>
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<identifier>
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<use value="official"/>
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<system value="http://ehr.goodhealthclinic.org/identifiers/specimen"/>
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<value value="spec-200"/>
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</identifier>
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<!-- Filler ID moved to accsession number
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<identifier>
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<use value="official"></use>
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<label value="Filler Specimen ID"></label>
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<system value="http://lis.acmelabs.org/identifiers/specimen"/>
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<value value="SID456"/>
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</identifier>
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-->
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<!--
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Type is a loosely defined field because there is such a lot of variation in how it is used.
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The principal variation is how much information that could be represented elsewhere is also
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represented here. For instance, here's some possible types:
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lithium heparin plasma (+ .container.additive) (e.g. SNOMED CT 446272009)
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transfusion bag of blood (+ container.type)
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Peritoneal lavage (+ collection.bodySite)
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If the type includes other fields, it would be normal not to populate the other fields
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Note that this practice is so widespread that it's pointless to try and stop it :( -->
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<!-- choice of SNOMED CT concept code... -->
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<type>
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<coding>
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<system value="http://snomed.info/sct"/>
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<!-- EH: Note to balloters - lots of choices for whole blood I chose this. -->
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<code value="122555007"/>
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<display value="Venous blood specimen"/>
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</coding>
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<!-- and or local code -->
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<coding>
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<system value="http://lis.acmelabs.org/codes"/>
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<code value="BLD"/>
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<display value="Blood"/>
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</coding>
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<text value="Blood sample"/>
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</type>
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<!-- Patient is required from core -->
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<subject>
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<reference value="Patient/patient-uslab-example1"/>
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<display value="Todd Lerr"/>
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</subject>
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<!-- accession identifier - e.g. assigned by the labaratory when it is received.
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This is common, unlike specimen identifier -->
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<accessionIdentifier>
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<use value="official"/>
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<system value="http://lis.acmelabs.org/identifiers/accession"/>
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<value value="21041205000001"/>
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</accessionIdentifier>
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<collection>
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<!-- the time of collection is required. Usually a point in time, but can be a period
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(collectedPeriod) if it's a timed collection (e.g. a 24 hour urine) -->
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<collectedDateTime value="2014-12-05"/>
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</collection>
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</Specimen>
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Scenario 1 (PT+ INR)
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=============DiagnosticOrder Details==========================
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id: do-100
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subject:Todd G. Lerr
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orderer:Leonard T Bloodraw
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identifier: PLAC = do-100
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reason: I48.2(Details : {http://hl7.org/fhir/sid/icd-10-us code "I48.2" := "I48.2)
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status: requested
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ordered test: 100
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=============Order(ActionRequest) Details==========================
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id: order-100
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identifier: PLAC = order-100
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date: 12/15/2015 7:36:25 AM
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subject:Todd G. Lerr
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source:Leonard T Bloodraw
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detail:DiagnosticOrder/do-100
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=============OrderResponse(ActionResponse) Details==========================
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id: ordresp-100
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identifier: FILL = ordresp-100
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request:Order/order-100
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date: 12/15/2015 7:36:25 AM
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who:Acme Labs
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orderStatus: accepted
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=============DiagnosticReport Details==========================
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Generated Narrative with Details
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id: dr-100
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identifier: Filler Identifier = fill-id-100
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status: final
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code: PT+INR(Details : {http://lis.acmelabs.org/ordercodes code "100" := "100)
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subject:Todd G. Lerr()
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effective: 9/25/2015
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issued: 9/26/2015
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performer:Acme Labs()
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request:DiagnosticOrder/do-100()
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specimen:Specimen/spec-100()
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result:
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Observation/obs-100()
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Observation/obs-101()
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=============Observation details==========================
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Generated Narrative with Details
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id: obs-102
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identifier: obs-102
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status: final
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code: 11(Details : {http://lis.acmelabs.org/codes code "11" := "11)
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subject:Todd G. Lerr
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value: 10.5s(Details: http://unitsofmeasure.org code s := "s")
|
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specimen:spec-100
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=============Observation details==========================
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Generated Narrative with Details
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id: obs-101
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identifier: obs-101
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status: final
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code: 12(Details : {http://lis.acmelabs.org/codes code "12" := "12)
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subject:Todd G. Lerr
|
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value: 1{INR}(Details: http://unitsofmeasure.org code {INR} := "{INR}")
|
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specimen:spec-100
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Scenario 2 (Blood Lead)
|
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=============DiagnosticOrder Details==========================
|
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|
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Generated Narrative with Details
|
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identifier: PLAC = do-200
|
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|
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subject:Todd Lerr
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|
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orderer:Dr Leonard T Bloodraw Jr
|
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|
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identifier: do-200 (official)
|
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|
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reason: Abnormal lead level in blood(Details : {http://www.icd10data.com/icd10pcs code "R78.71" := "R78.71", given as "Abnormal lead level in blood"})
|
16
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supportingInformation: ,Lead Exposure
|
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|
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status: requested
|
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|
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priority: routine
|
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note: Annontation: patient is afraid of needles
|
24
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+
|
25
|
+
ordered test: 200
|
26
|
+
|
27
|
+
|
28
|
+
=============Order(ActionRequest) Details==========================
|
29
|
+
|
30
|
+
Generated Narrative with Details
|
31
|
+
|
32
|
+
id: order-200
|
33
|
+
|
34
|
+
identifier: PLAC = order-200
|
35
|
+
|
36
|
+
date: 12/15/2015 7:36:25 AM
|
37
|
+
|
38
|
+
subject:Todd G. Lerr
|
39
|
+
|
40
|
+
source:Leonard T Bloodraw
|
41
|
+
|
42
|
+
detail:DiagnosticOrder/do-200
|
43
|
+
|
44
|
+
|
45
|
+
|
46
|
+
=============OrderResponse(ActionResponse) Details==========================
|
47
|
+
|
48
|
+
|
49
|
+
id: example
|
50
|
+
request: Order/order-200
|
51
|
+
date: 12/15/2015 7:36:25 AM
|
52
|
+
who: Acme Labs
|
53
|
+
orderStatus: accepted
|
54
|
+
|
55
|
+
=============DiagnosticReport Details==========================
|
56
|
+
|
57
|
+
Generated Narrative with Details
|
58
|
+
|
59
|
+
id: dr-200
|
60
|
+
|
61
|
+
identifier: FILL = dr-200
|
62
|
+
|
63
|
+
status: final
|
64
|
+
|
65
|
+
code: Blood Lead Report(Details : {LOINC code "5671-3" := "5671-3", given as "Lead [Mass/volume] in Blood"}; {http://lis.acmelabs.org/codes code "BLDLD" := "BLDLD", given as "Blood Lead"})
|
66
|
+
|
67
|
+
subject:Todd Lerr
|
68
|
+
|
69
|
+
effective: 12/5/2014
|
70
|
+
|
71
|
+
issued: 12/6/2014 3:42:15 PM
|
72
|
+
|
73
|
+
performer:Gregory F House, PhD
|
74
|
+
|
75
|
+
request:do-200 ()
|
76
|
+
|
77
|
+
specimen:Blood Sample ()
|
78
|
+
|
79
|
+
result:Blood Lead (Observation/obs-200)
|
80
|
+
|
81
|
+
conclusion: Elevated Blood Lead levels
|
82
|
+
|
83
|
+
codedDiagnosis: Increased blood lead level(Details : {SNOMED CT code "407152001" := "407152001", given as "Increased blood lead level"})
|
84
|
+
|
85
|
+
presentedForm:
|
86
|
+
|
87
|
+
|
88
|
+
=============Observation details==========================
|
89
|
+
|
90
|
+
|
91
|
+
id: obs-200
|
92
|
+
identifier: lab test result ID = obs-200 (OFFICIAL)
|
93
|
+
status: final
|
94
|
+
code: Blood Lead (Details : {LOINC code '5671-3' = 'Lead [Mass/volume] in Blood', given as 'Lead [Mass/volume] in Blood'}; {urn:oid:2.16.840.1.113883.3.72.5.24 code 'BLDLD' = '??', given as 'Blood Lead'})
|
95
|
+
subject: Todd Lerr
|
96
|
+
effective: Dec 5, 2014
|
97
|
+
issued: Dec 6, 2014 3:42:15 PM
|
98
|
+
performer: Dr Leonard T Bloodraw Jr
|
99
|
+
value: 65 microgram per deciliter (Details: http://unitsofmeasure.org code ug/dL = '??')
|
100
|
+
interpretation: High (Details : {http://hl7.org/fhir/v2/0078 code 'H' = 'High)
|
101
|
+
specimen: Blood sample
|
102
|
+
ReferenceRanges
|
103
|
+
-High *5.0 microgram per deciliter (Details: http://unitsofmeasure.org code ug/dL = '??')
|
@@ -0,0 +1,201 @@
|
|
1
|
+
Scenario 1 (PT+ INR)
|
2
|
+
|
3
|
+
=============DiagnosticOrder Details==========================
|
4
|
+
|
5
|
+
id: do-300
|
6
|
+
|
7
|
+
subject:Todd G. Lerr
|
8
|
+
|
9
|
+
orderer:Leonard T Bloodraw
|
10
|
+
|
11
|
+
identifier: PLAC = do-300
|
12
|
+
|
13
|
+
reason: Other pneumonia, unspecified organism(Details : {http://hl7.org/fhir/sid/icd-10-us code "J18.8" := "J18.8", given as "Other pneumonia, unspecified organism"})
|
14
|
+
|
15
|
+
specimen:Blood Specimen ()
|
16
|
+
|
17
|
+
status: requested
|
18
|
+
|
19
|
+
priority: routine
|
20
|
+
|
21
|
+
ordered test: 300
|
22
|
+
|
23
|
+
|
24
|
+
|
25
|
+
=============Order(ActionRequest) Details==========================
|
26
|
+
|
27
|
+
id: order-300
|
28
|
+
|
29
|
+
identifier: PLAC = order-300
|
30
|
+
|
31
|
+
date: 12/15/2015 7:36:25 AM
|
32
|
+
|
33
|
+
subject:Todd G. Lerr
|
34
|
+
|
35
|
+
source:Leonard T Bloodraw
|
36
|
+
|
37
|
+
detail:DiagnosticOrder/do-300
|
38
|
+
|
39
|
+
|
40
|
+
|
41
|
+
=============OrderResponse(ActionResponse) Details==========================
|
42
|
+
|
43
|
+
id: ordresp-300
|
44
|
+
|
45
|
+
identifier: FILL = ordresp-300
|
46
|
+
|
47
|
+
request:Order/order-300
|
48
|
+
|
49
|
+
date: 12/15/2015 7:36:25 AM
|
50
|
+
|
51
|
+
who:Acme Labs
|
52
|
+
|
53
|
+
orderStatus: accepted
|
54
|
+
|
55
|
+
|
56
|
+
|
57
|
+
=============DiagnosticReport Details==========================
|
58
|
+
|
59
|
+
Generated Narrative with Details
|
60
|
+
|
61
|
+
id: dr-300
|
62
|
+
|
63
|
+
identifier: , Placer Identifier = do-300
|
64
|
+
|
65
|
+
status: final
|
66
|
+
|
67
|
+
code: CBC_diff(Details : {http://lis.acmelabs.org/codes code "300" := "300", given as "CBC_diff"}; {LOINC code "57021-8" := "57021-8", given as "CBC W Auto Differential panel in Blood"})
|
68
|
+
|
69
|
+
subject:Todd G. Lerr
|
70
|
+
|
71
|
+
effective: 9/25/2015
|
72
|
+
|
73
|
+
issued: 9/26/2015
|
74
|
+
|
75
|
+
performer:Acme Labs
|
76
|
+
|
77
|
+
request:DiagnosticOrder/do-300
|
78
|
+
|
79
|
+
specimen:Blood Sample
|
80
|
+
|
81
|
+
result:
|
82
|
+
|
83
|
+
Erythrocytes
|
84
|
+
Leukocytes
|
85
|
+
Neutrophils
|
86
|
+
Platelet Count
|
87
|
+
Hematocrit
|
88
|
+
|
89
|
+
=============Observation details==========================
|
90
|
+
|
91
|
+
id: obs-300
|
92
|
+
|
93
|
+
identifier: obs-300
|
94
|
+
|
95
|
+
status: final
|
96
|
+
|
97
|
+
code: Erythrocytes(Details : {LOINC code "26453-1" := "26453-1", given as "Erythrocytes [#/volume] in Blood"})
|
98
|
+
|
99
|
+
subject:Todd Lerr
|
100
|
+
|
101
|
+
effective: 12/5/2014
|
102
|
+
|
103
|
+
issued: 12/6/2014 3:42:15 PM
|
104
|
+
|
105
|
+
value: 4.41X10(12)/L(Details: http://unitsofmeasure.org code 10*6/uL := "10*6/uL")
|
106
|
+
|
107
|
+
interpretation: Normal(Details : {http://hl7.org/fhir/v2/0078 code "N" := "Normal)
|
108
|
+
|
109
|
+
specimen:Blood sample
|
110
|
+
|
111
|
+
=============Observation details==========================
|
112
|
+
|
113
|
+
id: obs-301
|
114
|
+
|
115
|
+
identifier: obs-301
|
116
|
+
|
117
|
+
status: final
|
118
|
+
|
119
|
+
code: Leukocytes(Details : {LOINC code "26464-8" := "26464-8", given as "Leukocytes [#/volume] in Blood"})
|
120
|
+
|
121
|
+
subject:Todd Lerr
|
122
|
+
|
123
|
+
effective: 12/5/2014
|
124
|
+
|
125
|
+
issued: 12/6/2014 3:42:15 PM
|
126
|
+
|
127
|
+
value: 105600/uL(Details: http://unitsofmeasure.org code {cells}/uL := "{cells}/uL")
|
128
|
+
|
129
|
+
interpretation: Critically high(Details : {http://hl7.org/fhir/v2/0078 code "HH" := "Critically high)
|
130
|
+
|
131
|
+
specimen:Blood sample
|
132
|
+
|
133
|
+
=============Observation details==========================
|
134
|
+
|
135
|
+
id: obs-302
|
136
|
+
|
137
|
+
identifier: obs-302
|
138
|
+
|
139
|
+
status: final
|
140
|
+
|
141
|
+
code: Neutrophils(Details : {LOINC code "26499-4" := "26499-4", given as "Neutrophils [#/volume] in Blood"})
|
142
|
+
|
143
|
+
subject:Todd Lerr
|
144
|
+
|
145
|
+
effective: 12/5/2014
|
146
|
+
|
147
|
+
issued: 12/6/2014 3:42:15 PM
|
148
|
+
|
149
|
+
value: 58000/uL(Details: http://unitsofmeasure.org code {cells}/uL := "{cells}/uL")
|
150
|
+
|
151
|
+
interpretation: Critically high(Details : {http://hl7.org/fhir/v2/0078 code "HH" := "Critically high)
|
152
|
+
|
153
|
+
specimen:Blood sample
|
154
|
+
|
155
|
+
=============Observation details==========================
|
156
|
+
|
157
|
+
|
158
|
+
id: obs-303
|
159
|
+
|
160
|
+
identifier: obs-303
|
161
|
+
|
162
|
+
status: final
|
163
|
+
|
164
|
+
code: Platelet Count(Details : {LOINC code "26515-7" := "26515-7", given as "Platelet Count [#/volume] in Blood"})
|
165
|
+
|
166
|
+
subject:Todd Lerr
|
167
|
+
|
168
|
+
effective: 12/5/2014
|
169
|
+
|
170
|
+
issued: 12/6/2014 3:42:15 PM
|
171
|
+
|
172
|
+
value: 210000/uL(Details: http://unitsofmeasure.org code {cells}/uL := "{cells}/uL")
|
173
|
+
|
174
|
+
interpretation: Normal(Details : {http://hl7.org/fhir/v2/0078 code "N" := "Normal)
|
175
|
+
|
176
|
+
specimen:Blood sample
|
177
|
+
|
178
|
+
|
179
|
+
|
180
|
+
=============Observation details==========================
|
181
|
+
|
182
|
+
id: obs-304
|
183
|
+
|
184
|
+
identifier: obs-304
|
185
|
+
|
186
|
+
status: final
|
187
|
+
|
188
|
+
code: Hematocrit(Details : {LOINC code "20570-8" := "20570-8", given as "Hematocrit [Volume Fraction] of Blood"})
|
189
|
+
|
190
|
+
subject:Todd Lerr
|
191
|
+
|
192
|
+
effective: 12/5/2014
|
193
|
+
|
194
|
+
issued: 12/6/2014 3:42:15 PM
|
195
|
+
|
196
|
+
value: 41%(Details: http://unitsofmeasure.org code % := "%")
|
197
|
+
|
198
|
+
interpretation: Normal(Details : {http://hl7.org/fhir/v2/0078 code "N" := "Normal)
|
199
|
+
|
200
|
+
specimen:Blood sample
|
201
|
+
|