plan_executor 1.0.2

data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/track3-cds-evaluate-cdc-immunization.xml

@@ -0,0 +1,290 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<TestScript xmlns="http://hl7.org/fhir">
+	<id value="track3-cds-evaluate-cdc-immunization"/>
+
+	<url value="http://wildfhir.aegis.net/fhir/TestScript/track3-cds-evaluate-cdc-immunization"/>
+	<name value="FHIR Connectathon 11 - Track 3 - CDS on FHIR - Evaluate CDC Immunization"/>
+	<status value="draft"/>
+	<publisher value="Database Consulting Group, AEGIS.net, Inc."/>
+	<contact>
+		<name value="Bryn Rhodes"/>
+		<telecom>
+			<system value="email"/>
+			<value value="bryn@databaseconsultinggroup.com"/>
+			<use value="work"/>
+		</telecom>
+	</contact>
+	<contact>
+		<name value="Touchstone Support"/>
+		<telecom>
+			<system value="email"/>
+			<value value="Touchstone_Support@aegis.net"/>
+			<use value="work"/>
+		</telecom>
+	</contact>
+	<date value="2015-12-23"/>
+	<description value="FHIR Connectathon 11 - Track 3 - CDS on FHIR - Evaluate CDC immunization test."/>
+	<useContext>
+		<coding>
+			<system value="urn:iso:std:iso:3166"/>
+			<code value="US"/>
+			<display value="United States of America (the)"/>
+		</coding>
+	</useContext>
+	<requirements value="DecisionSupportServiceModule Evaluate Operation"/>
+	<copyright value="© Database Consulting Group 2015+, © AEGIS.net, Inc. 2015+"/>
+
+	<metadata>
+		<capability>
+			<required value="true"/>
+			<validated value="true"/>
+			<description value="DecisionSupportServiceModule $evaluate operation"/>
+			<link value="http://hl7.org/fhir/2016Jan/decisionsupportservicemodule-operations.html#evaluate"/>
+			<conformance>
+				<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/conformance/DecisionSupportServiceModule-Evaluate.xml"/>
+				<display value="Minimum supported resource types and operations to verify on the destination server"/>
+			</conformance>
+		</capability>
+	</metadata>	
+
+	<fixture id="ecrs-fhir-cdc-immunizations-incomplete-request-payload">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-incomplete-request-payload.xml"/>
+			<display value="Incomplete CDC Immunization request payload"/>
+		</resource>
+	</fixture>
+	<fixture id="ecrs-fhir-cdc-immunizations-incomplete-response-min-payload">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-incomplete-response-min-payload.xml"/>
+			<display value="Incomplete CDC Immunization response payload"/>
+		</resource>
+	</fixture>
+	<fixture id="ecrs-fhir-cdc-immunizations-incomplete-response-payload">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-incomplete-response-payload.xml"/>
+			<display value="Incomplete CDC Immunization response payload"/>
+		</resource>
+	</fixture>
+	<fixture id="ecrs-fhir-cdc-immunizations-malformed-request-payload">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-malformed-request-payload.xml"/>
+			<display value="Malformed CDC Immunization request payload"/>
+		</resource>
+	</fixture>
+	<fixture id="ecrs-fhir-cdc-immunizations-malformed-response-min-payload">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-malformed-response-min-payload.xml"/>
+			<display value="Malformed CDC Immunization response payload"/>
+		</resource>
+	</fixture>
+	<fixture id="ecrs-fhir-cdc-immunizations-malformed-response-payload">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-malformed-response-payload.xml"/>
+			<display value="Malformed CDC Immunization response payload"/>
+		</resource>
+	</fixture>
+	<fixture id="ecrs-fhir-cdc-immunizations-request-payload">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-request-payload.xml"/>
+			<display value="CDC Immunization request payload"/>
+		</resource>
+	</fixture>
+	<fixture id="ecrs-fhir-cdc-immunizations-response-min-payload">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-response-min-payload.xml"/>
+			<display value="CDC Immunization response payload"/>
+		</resource>
+	</fixture>
+	<fixture id="ecrs-fhir-cdc-immunizations-response-payload">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-response-payload.xml"/>
+			<display value="CDC Immunization response payload"/>
+		</resource>
+	</fixture>
+	<fixture id="ecrs-fhir-cdc-immunizations-unauthorized-request-payload">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-unauthorized-request-payload.xml"/>
+			<display value="Unauthorized CDC Immunization request payload"/>
+		</resource>
+	</fixture>
+	<fixture id="ecrs-fhir-cdc-immunizations-unauthorized-response-min-payload">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-unauthorized-response-min-payload.xml"/>
+			<display value="Unauthorized CDC Immunization response payload"/>
+		</resource>
+	</fixture>
+	<fixture id="ecrs-fhir-cdc-immunizations-unauthorized-response-payload">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/ecrs-fhir-cdc-immunizations-unauthorized-response-payload.xml"/>
+			<display value="Unauthorized CDC Immunization response payload"/>
+		</resource>
+	</fixture>
+
+	<test id="evaluate-cdc-immunization">
+		<name value="EvaluateWithCDCImmunizationPayload"/>
+		<description value="Test the $evaluate operation of the DecisionSupportServiceModule resource."/>
+		<action>
+			<operation>
+				<type>
+					<code value="evaluate"/>
+				</type>
+				<description value="Test the $evaluate operation of the DecisionSupportServiceModule with CDC Immunization payload. The destination server is expected to have the DecisionSupportServiceModule/ecrs-fhir-cdc-immunizations instance in its repository."/>
+				<accept value="xml"/>
+				<contentType value="xml"/>
+				<params value="/DecisionSupportServiceModule/ecrs-fhir-cdc-immunizations/$evaluate"/>
+				<responseId value="evaluate-actual-response-payload"/> <!-- Not needed until subsequent tests are defined that require this reference. -->
+				<sourceId value="ecrs-fhir-cdc-immunizations-request-payload"/>
+			</operation>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned HTTP status is 200(OK)."/>
+				<response value="okay"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned format is XML."/>
+				<contentType value="xml"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned resource type is GuidanceResponse."/>
+				<resource value="GuidanceResponse"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that returned GuidanceResponse contains the minimum expected content."/>
+				<minimumId value="ecrs-fhir-cdc-immunizations-response-min-payload"/>
+			</assert>
+		</action>
+	</test>
+
+	<test id="evaluate-cdc-immunization-incomplete">
+		<name value="EvaluateWithIncompleteCDCImmunizationPayload"/>
+		<description value="Test the $evaluate operation of the DecisionSupportServiceModule resource."/>
+		<action>
+			<operation>
+				<type>
+					<code value="evaluate"/>
+				</type>
+				<description value="Test the $evaluate operation of the DecisionSupportServiceModule with an incomplete CDC Immunization payload. The destination server is expected to have the DecisionSupportServiceModule/ecrs-fhir-cdc-immunizations instance in its repository."/>
+				<accept value="xml"/>
+				<contentType value="xml"/>
+				<params value="/DecisionSupportServiceModule/ecrs-fhir-cdc-immunizations/$evaluate"/>
+				<responseId value="evaluate-actual-response-payload"/> <!-- Not needed until subsequent tests are defined that require this reference. -->
+				<sourceId value="ecrs-fhir-cdc-immunizations-incomplete-request-payload"/>
+			</operation>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned HTTP status is 200(OK)."/>
+				<response value="okay"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned format is XML."/>
+				<contentType value="xml"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned resource type is GuidanceResponse."/>
+				<resource value="GuidanceResponse"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that returned GuidanceResponse contains the minimum expected content."/>
+				<minimumId value="ecrs-fhir-cdc-immunizations-incomplete-response-min-payload"/>
+			</assert>
+		</action>
+	</test>
+
+	<test id="evaluate-cdc-immunization-malformed">
+		<name value="EvaluateWithMalformedCDCImmunizationPayload"/>
+		<description value="Test the $evaluate operation of the DecisionSupportServiceModule resource."/>
+		<action>
+			<operation>
+				<type>
+					<code value="evaluate"/>
+				</type>
+				<description value="Test the $evaluate operation of the DecisionSupportServiceModule with a malformed CDC Immunization payload. The destination server is expected to have the DecisionSupportServiceModule/ecrs-fhir-cdc-immunizations instance in its repository."/>
+				<accept value="xml"/>
+				<contentType value="xml"/>
+				<params value="/DecisionSupportServiceModule/ecrs-fhir-cdc-immunizations/$evaluate"/>
+				<responseId value="evaluate-actual-response-payload"/> <!-- Not needed until subsequent tests are defined that require this reference. -->
+				<sourceId value="ecrs-fhir-cdc-immunizations-malformed-request-payload"/>
+			</operation>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned HTTP status is 200(OK)."/>
+				<response value="okay"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned format is XML."/>
+				<contentType value="xml"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned resource type is GuidanceResponse."/>
+				<resource value="GuidanceResponse"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that returned GuidanceResponse contains the minimum expected content."/>
+				<minimumId value="ecrs-fhir-cdc-immunizations-malformed-response-min-payload"/>
+			</assert>
+		</action>
+	</test>
+
+	<test id="evaluate-cdc-immunization-unauthorized">
+		<name value="EvaluateWithUnauthorizedCDCImmunizationPayload"/>
+		<description value="Test the $evaluate operation of the DecisionSupportServiceModule resource."/>
+		<action>
+			<operation>
+				<type>
+					<code value="evaluate"/>
+				</type>
+				<description value="Test the $evaluate operation of the DecisionSupportServiceModule with an unauthorized CDC Immunization payload. The destination server is expected to have the DecisionSupportServiceModule/ecrs-fhir-cdc-immunizations instance in its repository."/>
+				<accept value="xml"/>
+				<contentType value="xml"/>
+				<params value="/DecisionSupportServiceModule/ecrs-fhir-cdc-immunizations/$evaluate"/>
+				<responseId value="evaluate-actual-response-payload"/> <!-- Not needed until subsequent tests are defined that require this reference. -->
+				<sourceId value="ecrs-fhir-cdc-immunizations-unauthorized-request-payload"/>
+			</operation>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned HTTP status is 200(OK)."/>
+				<response value="okay"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned format is XML."/>
+				<contentType value="xml"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned resource type is OperationOutcome."/>
+				<resource value="OperationOutcome"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that returned GuidanceResponse contains the minimum expected content."/>
+				<minimumId value="ecrs-fhir-cdc-immunizations-unauthorized-response-min-payload"/>
+			</assert>
+		</action>
+	</test>
+</TestScript>

data/lib/tests/testscripts/xml/Connectathon11/Track3-CDS-on-FHIR/track3-cds-evaluate-gao-profile.xml

@@ -0,0 +1,110 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<TestScript xmlns="http://hl7.org/fhir">
+	<id value="track3-cds-evaluate-gao-profile"/>
+
+	<url value="http://wildfhir.aegis.net/fhir/TestScript/track3-cds-evaluate-gao-profile"/>
+	<name value="FHIR Connectathon 11 - Track 3 - CDS on FHIR - Evaluate GAO Profile"/>
+	<status value="draft"/>
+	<publisher value="Database Consulting Group, AEGIS.net, Inc."/>
+	<contact>
+		<name value="Bryn Rhodes"/>
+		<telecom>
+			<system value="email"/>
+			<value value="bryn@databaseconsultinggroup.com"/>
+			<use value="work"/>
+		</telecom>
+	</contact>
+	<contact>
+		<name value="Touchstone Support"/>
+		<telecom>
+			<system value="email"/>
+			<value value="Touchstone_Support@aegis.net"/>
+			<use value="work"/>
+		</telecom>
+	</contact>
+	<date value="2015-12-23"/>
+	<description value="FHIR Connectathon 11 - Track 3 - CDS on FHIR - Evaluate GAO profile test."/>
+	<useContext>
+		<coding>
+			<system value="urn:iso:std:iso:3166"/>
+			<code value="US"/>
+			<display value="United States of America (the)"/>
+		</coding>
+	</useContext>
+	<requirements value="DecisionSupportServiceModule Evaluate Operation"/>
+	<copyright value="© Database Consulting Group 2015+, © AEGIS.net, Inc. 2015+"/>
+
+	<metadata>
+		<capability>
+			<required value="true"/>
+			<validated value="true"/>
+			<description value="DecisionSupportServiceModule $evaluate operation"/>
+			<link value="http://hl7.org/fhir/2016Jan/decisionsupportservicemodule-operations.html#evaluate"/>
+			<conformance>
+				<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/conformance/DecisionSupportServiceModule-Evaluate.xml"/>
+				<display value="Minimum supported resource types and operations to verify on the destination server"/>
+			</conformance>
+		</capability>
+	</metadata>	
+
+	<fixture id="gao-assessment-request">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/gao-assessment-request-payload.xml"/>
+			<display value="Evaluate request payload"/>
+		</resource>
+	</fixture>
+	<fixture id="gao-assessment-response">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/gao-assessment-response-payload.xml"/>
+			<display value="Evaluate response payload"/>
+		</resource>
+	</fixture>
+	<fixture id="gao-assessment-response-min">
+		<resource>
+			<reference value="/Connectathon11/Track3-CDS-on-FHIR/_reference/resources/gao-assessment-response-payload-min.xml"/>
+			<display value="Evaluate response payload minimum contents for validation"/>
+		</resource>
+	</fixture>
+
+	<test id="evaluate-gao-profile">
+		<name value="EvaluateWithGAOProfilePayload"/>
+		<description value="Test the $evaluate operation of the DecisionSupportServiceModule resource."/>
+		<action>
+			<operation>
+				<type>
+					<code value="evaluate"/>
+				</type>
+				<description value="Test the $evaluate operation of the DecisionSupportServiceModule with GAO profile payload. The destination server is expected to have the DecisionSupportServiceModule/gao-assessment instance in its repository."/>
+				<accept value="xml"/>
+				<contentType value="xml"/>
+				<params value="/DecisionSupportServiceModule/gao-assessment/$evaluate"/>
+				<responseId value="gao-assessment-actual-response"/> <!-- Not needed until subsequent tests are defined that require this reference. -->
+				<sourceId value="gao-assessment-request"/>
+			</operation>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned HTTP status is 200(OK)."/>
+				<response value="okay"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned format is XML."/>
+				<contentType value="xml"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that the returned resource type is GuidanceResponse."/>
+				<resource value="GuidanceResponse"/>
+			</assert>
+		</action>
+		<action>
+			<assert>
+				<description value="Confirm that returned GuidanceResponse contains the minimum expected content."/>
+				<minimumId value="gao-assessment-response-min"/>
+			</assert>
+		</action>
+	</test>
+</TestScript>

data/lib/tests/testscripts/xml/Connectathon11/Track6-FHIR-Genomics/Client_Assigned_Id/TestScript_FHIR-Genomics.xml

@@ -0,0 +1,170 @@
+<TestScript xmlns="http://hl7.org/fhir">
+    <id value="track1-fhir-genomics-client-id"/>
+
+	<url value="???"/>
+	<name value="FHIR Connectathon 11 - Track 6 - FHIR Genomics"/>
+	<status value="draft"/>
+	<publisher value="Clinical Genomics Workgroup"/>
+	<date value="2015-12-21"/>
+	<description value="FHIR Connectathon 11 - Track 6 - FHIR Genomics - JSON Format - Baseline tests to create, update, retrieve history and search with client assigned resource id."/>
+    
+    <fixture id="sequence-example-1">
+        <resource>
+            <reference value="/Connectathon11/Track-FHIR-Genomics/_reference/resources/sequence-example-1.json"/>
+        </resource>
+    </fixture>
+    <fixture id="sequence-example-2">
+        <resource>
+            <reference value="/Connectathon11/Track-FHIR-Genomics/_reference/resources/sequence-example-2.json"/>
+        </resource>
+    </fixture>
+    
+    <setup>
+        <action>
+            <operation>
+                <type>
+                    <code value="delete"/>
+                </type>
+                <resource value="Sequence"/>
+                <description value="Use a conditional delete operation to insure the patient does not exist on the server."/>
+                <accept value="json"/>
+                <contentType value="json"/>
+                <params value="/${createIdentifier}"/>
+            </operation>
+        </action>
+    </setup>
+    
+    <profile id="bundle-profile">
+     <reference value="http://hl7.org/fhir/StructureDefinition/Bundle"/>
+	</profile>
+    <profile id="patient-profile">
+        <reference value="http://hl7.org/fhir/StructureDefinition/Sequence"/>
+    </profile>
+    
+    <variable>
+        <name value="createIdentifier"/>
+        <path value="Sequence/identifier/value"/>
+    </variable>
+    <variable>
+        <name value="searchVariantID"/>
+        <path value="Sequence/variantID/coding/code"/>
+    </variable>
+
+    <test id="Step1-RegisterNewSequence">
+        <name value="RegisterNewSequence"/>
+        <description value="Create a new Sequence where the client assigns the resource id using JSON."/>
+        
+        <action>
+            <operation>
+                <type>
+                    <code value="update"/>
+                </type>
+                <resource value="Sequence"/>
+                <description value="Create patient with client assigned resource id."/>
+                <accept value="json"/>
+                <contentType value="json"/>
+                <params value="/${createIdentifier}"/>
+                <responseId value="create-response" />
+                <sourceId value="sequence-example"/>
+            </operation>
+        </action>
+        <action>
+            <assert>
+                <operator value="in"/>
+                <responseCode value="200,201"/>
+            </assert>
+        </action>
+        <action>
+            <assert>
+                <contentType value="json"/>
+                <warningOnly value="true"/>
+            </assert>
+        </action>
+        
+        <action>
+            <operation>
+                <type>
+                    <code value="read"/>
+                </type>
+                <resource value="Sequence"/>
+                <description value="Read using params element"/>
+                <accept value="json"/>
+                <contentType value="json"/>
+                <params value="/${createIdentifier}"/>
+            </operation>
+        </action>
+        <action>
+            <assert>
+                <validateProfileId value="sequence-profile"/>
+                <warningOnly value="true"/>
+            </assert>
+        </action>
+        <action>
+            <assert>
+                <description value="Confirm that the response contains the created version of the sequence."/>
+            </assert>
+        </action>
+        <action>
+            <assert>
+                <description value="Confirm that version of resource is 1 after the create. Warning only as the server may re-establish this resource id from a previous deletion."/>
+                <path value="Patient/meta/versionId"/>
+                <value value="1"/>
+                <warningOnly value="true"/>
+            </assert>
+        </action>
+    </test>
+    
+    <test id="Step2-SequenceSearch">
+        <name value="Step2-SequenceSearch"/>
+        <description value="Search for a patient with the name 'James Chalmers'."/>
+        
+        <action>
+            <operation>
+                <type>
+                    <code value="search"/>
+                </type>
+                <resource value="Sequence"/>
+                <description value="Search for the Sequence with variant rs1201207."/>
+                <accept value="json"/>
+                <contentType value="json"/>
+                <params value="?variantID=${searchVariantID}"/>
+            </operation>
+        </action>
+        <action>
+            <assert>
+                <response value="okay"/>
+            </assert>
+        </action>
+        <action>
+            <assert>
+                <contentType value="json"/>
+            </assert>
+        </action>
+        <action>
+            <assert>
+                <resource value="Bundle"/>
+            </assert>
+        </action>
+        <action>
+            <assert>
+                <description value="Confirm that there is at least one record returned. There could be other sequence records returned."/>
+                <operator value="greaterThan"/>
+                <path value="/Bundle/total"/>
+                <value value="0"/>
+                <warningOnly value="true"/>
+            </assert>
+        </action>
+    </test>
+    
+    <teardown>
+        <action>
+            <operation>
+                <type>
+                    <code value="delete"/>
+                </type>
+                <resource value="Sequence"/>
+                <params value="/${createIdentifier}"/>
+            </operation>
+        </action>
+    </teardown>
+</TestScript>

data/lib/tests/testscripts/xml/Connectathon11/Track6-FHIR-Genomics/_reference/resources/sequence-example-1.xml

@@ -0,0 +1,31 @@
+<?xml version="1.0" encoding="UTF-8"?> 
+<Sequence xmlns="http://hl7.org/fhir" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://hl7.org/fhir ..\..\schema\sequence.xsd">
+    <id value="example-1"/>
+    <type value="DNA"/>
+    <variationID>
+        <coding>
+            <system value="http://www.ncbi.nlm.nih.gov/projects/SNP"/>
+            <code value="rs1201207"/>
+        </coding>
+        <text value="rs1201207"/>
+    </variationID>
+    <coordinate>
+        <chromosome>
+            <text value="4"/>
+        </chromosome>
+        <start value="151829659"/>
+        <end value="151829660"/>
+        <genomeBuild>
+            <text value="GRCh37"/>
+        </genomeBuild>
+    </coordinate>
+    <species>
+        <coding>
+            <system value="http://snomed.info/sct"/>
+            <code value="337915000"/>
+        </coding>
+        <text value="Homo sapiens"/>
+    </species>
+    <observedAllele value="C"/>
+    <referenceAllele value="T"/>
+</Sequence> 

data/lib/tests/testscripts/xml/Connectathon11/Track6-FHIR-Genomics/_reference/resources/sequence-example-2.xml

@@ -0,0 +1,31 @@
+<?xml version="1.0" encoding="UTF-8"?> 
+<Sequence xmlns="http://hl7.org/fhir" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://hl7.org/fhir ..\..\schema\sequence.xsd">
+    <id value="example-2"/>
+    <type value="DNA"/>
+    <variationID>
+        <coding>
+            <system value="http://www.ncbi.nlm.nih.gov/projects/SNP"/>
+            <code value="rs3729508"/>
+        </coding>
+        <text value="rs1201207"/>
+    </variationID>
+    <coordinate>
+        <chromosome>
+            <text value="17"/>
+        </chromosome>
+        <start value="26109030"/>
+        <end value="26109031"/>
+        <genomeBuild>
+            <text value="GRCh37"/>
+        </genomeBuild>
+    </coordinate>
+    <species>
+        <coding>
+            <system value="http://snomed.info/sct"/>
+            <code value="337915000"/>
+        </coding>
+        <text value="Homo sapiens"/>
+    </species>
+    <observedAllele value="C"/>
+    <referenceAllele value="T"/>
+</Sequence>