lims-core 3.2.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +15 -0
- data/.gitignore +5 -0
- data/.rspec +1 -0
- data/.rvmrc +2 -0
- data/.travis.yml +2 -0
- data/.vimrc +27 -0
- data/.yard_templates/default/layout/html/footer.erb +0 -0
- data/.yardopts +1 -0
- data/Gemfile +54 -0
- data/Gemfile.lock +197 -0
- data/Guardfile +21 -0
- data/Guardfile.tmux +28 -0
- data/README.markdown +67 -0
- data/Rakefile +16 -0
- data/config/database.yml +16 -0
- data/doc/Array.html +116 -0
- data/doc/Array/ArrayLoggerPersistor.html +152 -0
- data/doc/Lims.html +114 -0
- data/doc/Lims/Core.html +178 -0
- data/doc/Lims/Core/Action.html +91 -0
- data/doc/Lims/Core/Actions.html +116 -0
- data/doc/Lims/Core/Actions/Action.html +216 -0
- data/doc/Lims/Core/Actions/Action/AfterEval.html +853 -0
- data/doc/Lims/Core/Actions/Action/InvalidParameters.html +268 -0
- data/doc/Lims/Core/Actions/ActionGroup.html +196 -0
- data/doc/Lims/Core/Actions/ActionGroup/AfterEval.html +315 -0
- data/doc/Lims/Core/Actions/BulkAction.html +224 -0
- data/doc/Lims/Core/Actions/BulkAction/AfterEval.html +253 -0
- data/doc/Lims/Core/Actions/TestActionGroup.html +101 -0
- data/doc/Lims/Core/Actions/TestActionGroup/Action.html +133 -0
- data/doc/Lims/Core/Actions/TestActionGroup/ActionGroup.html +127 -0
- data/doc/Lims/Core/Base.html +287 -0
- data/doc/Lims/Core/Base/AccessibleViaSuper.html +252 -0
- data/doc/Lims/Core/Base/ClassMethod.html +177 -0
- data/doc/Lims/Core/Base/HashString.html +177 -0
- data/doc/Lims/Core/Base/IsArrayOf.html +606 -0
- data/doc/Lims/Core/Base/State.html +130 -0
- data/doc/Lims/Core/Organization.html +113 -0
- data/doc/Lims/Core/Organization/Batch.html +106 -0
- data/doc/Lims/Core/Persistence.html +267 -0
- data/doc/Lims/Core/Persistence/ComparisonFilter.html +318 -0
- data/doc/Lims/Core/Persistence/Filter.html +252 -0
- data/doc/Lims/Core/Persistence/IdentityMap.html +409 -0
- data/doc/Lims/Core/Persistence/IdentityMap/Class.html +144 -0
- data/doc/Lims/Core/Persistence/IdentityMap/DuplicateError.html +126 -0
- data/doc/Lims/Core/Persistence/IdentityMap/DuplicateIdError.html +136 -0
- data/doc/Lims/Core/Persistence/IdentityMap/DuplicateObjectError.html +136 -0
- data/doc/Lims/Core/Persistence/IdentityMapClass.html +133 -0
- data/doc/Lims/Core/Persistence/Logger.html +105 -0
- data/doc/Lims/Core/Persistence/Logger/Persistor.html +334 -0
- data/doc/Lims/Core/Persistence/Logger/Session.html +452 -0
- data/doc/Lims/Core/Persistence/Logger/Store.html +470 -0
- data/doc/Lims/Core/Persistence/MessageBus.html +871 -0
- data/doc/Lims/Core/Persistence/MessageBus/ConnectionError.html +123 -0
- data/doc/Lims/Core/Persistence/MessageBus/InvalidSettingsError.html +122 -0
- data/doc/Lims/Core/Persistence/MultiCriteriaFilter.html +293 -0
- data/doc/Lims/Core/Persistence/PersistAssociationTrait.html +91 -0
- data/doc/Lims/Core/Persistence/PersistableTrait.html +91 -0
- data/doc/Lims/Core/Persistence/Persistor.html +3072 -0
- data/doc/Lims/Core/Persistence/Persistor/DuplicateError.html +205 -0
- data/doc/Lims/Core/Persistence/Persistor/DuplicateIdError.html +147 -0
- data/doc/Lims/Core/Persistence/Persistor/DuplicateObjectError.html +147 -0
- data/doc/Lims/Core/Persistence/PersistorTrait.html +91 -0
- data/doc/Lims/Core/Persistence/ResourceState.html +1738 -0
- data/doc/Lims/Core/Persistence/Search.html +269 -0
- data/doc/Lims/Core/Persistence/Search/CreateSearch.html +251 -0
- data/doc/Lims/Core/Persistence/Search/SearchPersistor.html +240 -0
- data/doc/Lims/Core/Persistence/Search/SearchSequelPersistor.html +396 -0
- data/doc/Lims/Core/Persistence/Sequel.html +117 -0
- data/doc/Lims/Core/Persistence/Sequel/Filters.html +462 -0
- data/doc/Lims/Core/Persistence/Sequel/ForTest.html +101 -0
- data/doc/Lims/Core/Persistence/Sequel/ForTest/Name.html +137 -0
- data/doc/Lims/Core/Persistence/Sequel/ForTest/Name/NamePersitor.html +143 -0
- data/doc/Lims/Core/Persistence/Sequel/Migrations.html +266 -0
- data/doc/Lims/Core/Persistence/Sequel/Persistor.html +665 -0
- data/doc/Lims/Core/Persistence/Sequel/Session.html +501 -0
- data/doc/Lims/Core/Persistence/Sequel/Store.html +417 -0
- data/doc/Lims/Core/Persistence/Session.html +2751 -0
- data/doc/Lims/Core/Persistence/Session/UnmanagedObjectError.html +111 -0
- data/doc/Lims/Core/Persistence/StateGroup.html +696 -0
- data/doc/Lims/Core/Persistence/StateList.html +498 -0
- data/doc/Lims/Core/Persistence/Store.html +695 -0
- data/doc/Lims/Core/Persistence/UuidResource.html +1044 -0
- data/doc/Lims/Core/Persistence/UuidResource/InvalidUuidError.html +111 -0
- data/doc/Lims/Core/Persistence/UuidResource/UuidResourcePersistor.html +337 -0
- data/doc/Lims/Core/Persistence/Uuidable.html +799 -0
- data/doc/Lims/Core/Persistor.html +320 -0
- data/doc/Lims/Core/Resource.html +165 -0
- data/doc/Object.html +228 -0
- data/doc/SessionSpec.html +101 -0
- data/doc/SessionSpec/Model.html +279 -0
- data/doc/SessionSpec/Model/ModelPersistor.html +327 -0
- data/doc/_index.html +732 -0
- data/doc/class_list.html +47 -0
- data/doc/css/common.css +1 -0
- data/doc/css/full_list.css +55 -0
- data/doc/css/style.css +322 -0
- data/doc/file.README.html +127 -0
- data/doc/file_list.html +49 -0
- data/doc/frames.html +13 -0
- data/doc/index.html +127 -0
- data/doc/js/app.js +205 -0
- data/doc/js/full_list.js +167 -0
- data/doc/js/jquery.js +16 -0
- data/doc/method_list.html +1894 -0
- data/doc/top-level-namespace.html +100 -0
- data/lib/common.rb +18 -0
- data/lib/lims-core.rb +29 -0
- data/lib/lims-core/actions.rb +10 -0
- data/lib/lims-core/actions/action.rb +185 -0
- data/lib/lims-core/actions/action_group.rb +54 -0
- data/lib/lims-core/actions/bulk_action.rb +65 -0
- data/lib/lims-core/base.rb +132 -0
- data/lib/lims-core/helpers.rb +41 -0
- data/lib/lims-core/persistence.rb +15 -0
- data/lib/lims-core/persistence/comparison_filter.rb +54 -0
- data/lib/lims-core/persistence/filter.rb +23 -0
- data/lib/lims-core/persistence/identity_map.rb +55 -0
- data/lib/lims-core/persistence/logger/all.rb +5 -0
- data/lib/lims-core/persistence/logger/persistor.rb +35 -0
- data/lib/lims-core/persistence/logger/session.rb +30 -0
- data/lib/lims-core/persistence/logger/store.rb +37 -0
- data/lib/lims-core/persistence/message_bus.rb +131 -0
- data/lib/lims-core/persistence/multi_criteria_filter.rb +50 -0
- data/lib/lims-core/persistence/persist_association_trait.rb +96 -0
- data/lib/lims-core/persistence/persistable_trait.rb +150 -0
- data/lib/lims-core/persistence/persistor.rb +495 -0
- data/lib/lims-core/persistence/resource_state.rb +157 -0
- data/lib/lims-core/persistence/search.rb +3 -0
- data/lib/lims-core/persistence/search/all.rb +3 -0
- data/lib/lims-core/persistence/search/create_search.rb +55 -0
- data/lib/lims-core/persistence/search/search_persistor.rb +45 -0
- data/lib/lims-core/persistence/search/search_sequel_persistor.rb +40 -0
- data/lib/lims-core/persistence/sequel.rb +14 -0
- data/lib/lims-core/persistence/sequel/filters.rb +106 -0
- data/lib/lims-core/persistence/sequel/migrations.rb +14 -0
- data/lib/lims-core/persistence/sequel/migrations/add_audit_tables.rb +147 -0
- data/lib/lims-core/persistence/sequel/migrations/initial.rb +156 -0
- data/lib/lims-core/persistence/sequel/persistor.rb +200 -0
- data/lib/lims-core/persistence/sequel/session.rb +136 -0
- data/lib/lims-core/persistence/sequel/store.rb +37 -0
- data/lib/lims-core/persistence/session.rb +409 -0
- data/lib/lims-core/persistence/state_group.rb +97 -0
- data/lib/lims-core/persistence/state_list.rb +56 -0
- data/lib/lims-core/persistence/store.rb +73 -0
- data/lib/lims-core/persistence/uuid_resource.rb +115 -0
- data/lib/lims-core/persistence/uuid_resource_persistor.rb +43 -0
- data/lib/lims-core/persistence/uuidable.rb +107 -0
- data/lib/lims-core/resource.rb +21 -0
- data/lib/lims-core/subclass_tracker.rb +30 -0
- data/lib/lims-core/version.rb +5 -0
- data/lims-core.gemspec +40 -0
- data/makefile +52 -0
- data/showoff/core-2012-06-11/core/01_slide.md +237 -0
- data/showoff/core-2012-06-11/core/02_slide.md +110 -0
- data/showoff/core-2012-06-11/custom.css +44 -0
- data/showoff/core-2012-06-11/main/01_slide.md +53 -0
- data/showoff/core-2012-06-11/showoff.json +10 -0
- data/showoff/core-2012-06-11/tp1.tpl +1 -0
- data/spec/actions/action_group_spec.rb +39 -0
- data/spec/actions/spec_helper.rb +1 -0
- data/spec/persistence/identity_map_spec.rb +55 -0
- data/spec/persistence/logger/spec_helper.rb +7 -0
- data/spec/persistence/logger/store_spec.rb +48 -0
- data/spec/persistence/message_bus_spec.rb +76 -0
- data/spec/persistence/sequel/session_spec.rb +125 -0
- data/spec/persistence/sequel/spec_helper.rb +39 -0
- data/spec/persistence/sequel/store_shared.rb +25 -0
- data/spec/persistence/sequel/store_spec.rb +22 -0
- data/spec/persistence/session_spec.rb +199 -0
- data/spec/persistence/spec_helper.rb +2 -0
- data/spec/persistence/uuid_resource_spec.rb +80 -0
- data/spec/spec_helper.rb +10 -0
- data/spec/subclass_tracker_sperc.rb +62 -0
- data/utils/constant_tree.rb +29 -0
- data/utils/stack.rb +48 -0
- metadata +402 -0
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— Documentation by YARD 0.7.3
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<div id="content"><div id='filecontents'><!-- vim: spell:spelllang=en tw=80
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-->
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<h1>Overview </h1>
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<p>This gem implements the core functionalities of the LIMS (Laboratory Information Management System).
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It's not meant to be a stand alone application but the core library of the LIMS
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server.</p>
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<p>For more information consult the documentation.</p>
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<h1>Installation</h1>
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<pre class="code"><span class='id gem'>gem</span> <span class='id install'>install</span> <span class='id lims'>lims</span><span class='op'>-</span><span class='id core'>core</span>
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<p>Or, if you are using <a href="http://gembundler.com/">bundler</a> , add the following line</p>
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<pre class="code"> <span class='id gem'>gem</span> <span class='symbol'>:lims</span><span class='op'>-</span><span class='id core'>core</span><span class='comma'>,</span> <span class='symbol'>:git</span> <span class='op'>=></span> <span class='tstring'><span class='tstring_beg'>"</span><span class='tstring_end'>git+ssh://git@github.com/sanger/lims-core.git'
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</span></span></pre>
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<p>in your <code>Gemfile</code>.</p>
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<h1>Documentation</h1>
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<p>The documentation is generated using <a href="http://yardoc.org/index.html">yard</a> and can
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be found under the <code>doc/</code> directory or using a <code>yard server</code></p>
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<h1>Developers Guide</h1>
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<h2>Gem requirements</h2>
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<p>Ideally each should be loadable on its own. This mean that every file should
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require everything it needs. The exception is for gems re-opening ruby basic
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classes as facet do. The common requirements are grouped in the <code>lib/common.rb</code>
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file.</p>
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<p>For the user convenience, requiring a directory should requires everything
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underneath. However, requiring <code>lims-core</code> will require <code>Persistence</code>, but not
|
|
100
|
+
the subdirectories of it (specific to each different stores like <code>Sequel</code>, or
|
|
101
|
+
<code>Logger</code>). This to not force to install all the dependencies specific to each
|
|
102
|
+
store.</p>
|
|
103
|
+
|
|
104
|
+
<h2>Documentation Guide</h2>
|
|
105
|
+
|
|
106
|
+
<p>The documentation is written using <a href="http://yardoc.org/index.html">yard</a>.
|
|
107
|
+
It allows to write documentation within the doc and add <em>typing</em> hints/
|
|
108
|
+
expectations.
|
|
109
|
+
The recommended format for stand alone documentation files is
|
|
110
|
+
<a href="http://daringfireball.net/projects/markdown/">markdown</a>, however
|
|
111
|
+
it's easier to keep the native markup language used by <strong>yard</strong>, i.e. the
|
|
112
|
+
<a href="http://rdoc.sourceforge.net/">rdoc</a> one.
|
|
113
|
+
This allows the code to be parsed via <strong>rdoc</strong> and doesn't need the extra spaces at
|
|
114
|
+
the end of a line needed by <strong>markdown</strong>.</p>
|
|
115
|
+
|
|
116
|
+
<p>However, when the usage of pure <strong>markdown</strong> seems appropriate, it's still
|
|
117
|
+
possible to the use <code>@markup</code> switch.</p>
|
|
118
|
+
|
|
119
|
+
<p>Some documentation can also be added in the specs.</p>
|
|
120
|
+
|
|
121
|
+
<h2>Tests</h2>
|
|
122
|
+
|
|
123
|
+
<p>We are using <a href="http://rspec.info/">rspec</a>.</p></div></div>
|
|
124
|
+
|
|
125
|
+
|
|
126
|
+
</body>
|
|
127
|
+
</html>
|
data/doc/js/app.js
ADDED
|
@@ -0,0 +1,205 @@
|
|
|
1
|
+
function createSourceLinks() {
|
|
2
|
+
$('.method_details_list .source_code').
|
|
3
|
+
before("<span class='showSource'>[<a href='#' class='toggleSource'>View source</a>]</span>");
|
|
4
|
+
$('.toggleSource').toggle(function() {
|
|
5
|
+
$(this).parent().next().slideDown(100);
|
|
6
|
+
$(this).text("Hide source");
|
|
7
|
+
},
|
|
8
|
+
function() {
|
|
9
|
+
$(this).parent().next().slideUp(100);
|
|
10
|
+
$(this).text("View source");
|
|
11
|
+
});
|
|
12
|
+
}
|
|
13
|
+
|
|
14
|
+
function createDefineLinks() {
|
|
15
|
+
var tHeight = 0;
|
|
16
|
+
$('.defines').after(" <a href='#' class='toggleDefines'>more...</a>");
|
|
17
|
+
$('.toggleDefines').toggle(function() {
|
|
18
|
+
tHeight = $(this).parent().prev().height();
|
|
19
|
+
$(this).prev().show();
|
|
20
|
+
$(this).parent().prev().height($(this).parent().height());
|
|
21
|
+
$(this).text("(less)");
|
|
22
|
+
},
|
|
23
|
+
function() {
|
|
24
|
+
$(this).prev().hide();
|
|
25
|
+
$(this).parent().prev().height(tHeight);
|
|
26
|
+
$(this).text("more...");
|
|
27
|
+
});
|
|
28
|
+
}
|
|
29
|
+
|
|
30
|
+
function createFullTreeLinks() {
|
|
31
|
+
var tHeight = 0;
|
|
32
|
+
$('.inheritanceTree').toggle(function() {
|
|
33
|
+
tHeight = $(this).parent().prev().height();
|
|
34
|
+
$(this).parent().toggleClass('showAll');
|
|
35
|
+
$(this).text("(hide)");
|
|
36
|
+
$(this).parent().prev().height($(this).parent().height());
|
|
37
|
+
},
|
|
38
|
+
function() {
|
|
39
|
+
$(this).parent().toggleClass('showAll');
|
|
40
|
+
$(this).parent().prev().height(tHeight);
|
|
41
|
+
$(this).text("show all");
|
|
42
|
+
});
|
|
43
|
+
}
|
|
44
|
+
|
|
45
|
+
function fixBoxInfoHeights() {
|
|
46
|
+
$('dl.box dd.r1, dl.box dd.r2').each(function() {
|
|
47
|
+
$(this).prev().height($(this).height());
|
|
48
|
+
});
|
|
49
|
+
}
|
|
50
|
+
|
|
51
|
+
function searchFrameLinks() {
|
|
52
|
+
$('#method_list_link').click(function() {
|
|
53
|
+
toggleSearchFrame(this, relpath + 'method_list.html');
|
|
54
|
+
});
|
|
55
|
+
|
|
56
|
+
$('#class_list_link').click(function() {
|
|
57
|
+
toggleSearchFrame(this, relpath + 'class_list.html');
|
|
58
|
+
});
|
|
59
|
+
|
|
60
|
+
$('#file_list_link').click(function() {
|
|
61
|
+
toggleSearchFrame(this, relpath + 'file_list.html');
|
|
62
|
+
});
|
|
63
|
+
}
|
|
64
|
+
|
|
65
|
+
function toggleSearchFrame(id, link) {
|
|
66
|
+
var frame = $('#search_frame');
|
|
67
|
+
$('#search a').removeClass('active').addClass('inactive');
|
|
68
|
+
if (frame.attr('src') == link && frame.css('display') != "none") {
|
|
69
|
+
frame.slideUp(100);
|
|
70
|
+
$('#search a').removeClass('active inactive');
|
|
71
|
+
}
|
|
72
|
+
else {
|
|
73
|
+
$(id).addClass('active').removeClass('inactive');
|
|
74
|
+
frame.attr('src', link).slideDown(100);
|
|
75
|
+
}
|
|
76
|
+
}
|
|
77
|
+
|
|
78
|
+
function linkSummaries() {
|
|
79
|
+
$('.summary_signature').click(function() {
|
|
80
|
+
document.location = $(this).find('a').attr('href');
|
|
81
|
+
});
|
|
82
|
+
}
|
|
83
|
+
|
|
84
|
+
function framesInit() {
|
|
85
|
+
if (window.top.frames.main) {
|
|
86
|
+
document.body.className = 'frames';
|
|
87
|
+
$('#menu .noframes a').attr('href', document.location);
|
|
88
|
+
$('html head title', window.parent.document).text($('html head title').text());
|
|
89
|
+
}
|
|
90
|
+
}
|
|
91
|
+
|
|
92
|
+
function keyboardShortcuts() {
|
|
93
|
+
if (window.top.frames.main) return;
|
|
94
|
+
$(document).keypress(function(evt) {
|
|
95
|
+
if (evt.altKey || evt.ctrlKey || evt.metaKey || evt.shiftKey) return;
|
|
96
|
+
if (typeof evt.target !== "undefined" &&
|
|
97
|
+
(evt.target.nodeName == "INPUT" ||
|
|
98
|
+
evt.target.nodeName == "TEXTAREA")) return;
|
|
99
|
+
switch (evt.charCode) {
|
|
100
|
+
case 67: case 99: $('#class_list_link').click(); break; // 'c'
|
|
101
|
+
case 77: case 109: $('#method_list_link').click(); break; // 'm'
|
|
102
|
+
case 70: case 102: $('#file_list_link').click(); break; // 'f'
|
|
103
|
+
default: break;
|
|
104
|
+
}
|
|
105
|
+
});
|
|
106
|
+
}
|
|
107
|
+
|
|
108
|
+
function summaryToggle() {
|
|
109
|
+
$('.summary_toggle').click(function() {
|
|
110
|
+
localStorage.summaryCollapsed = $(this).text();
|
|
111
|
+
$(this).text($(this).text() == "collapse" ? "expand" : "collapse");
|
|
112
|
+
var next = $(this).parent().parent().next();
|
|
113
|
+
if (next.hasClass('compact')) {
|
|
114
|
+
next.toggle();
|
|
115
|
+
next.next().toggle();
|
|
116
|
+
}
|
|
117
|
+
else if (next.hasClass('summary')) {
|
|
118
|
+
var list = $('<ul class="summary compact" />');
|
|
119
|
+
list.html(next.html());
|
|
120
|
+
list.find('.summary_desc, .note').remove();
|
|
121
|
+
list.find('a').each(function() {
|
|
122
|
+
$(this).html($(this).find('strong').html());
|
|
123
|
+
$(this).parent().html($(this)[0].outerHTML);
|
|
124
|
+
});
|
|
125
|
+
next.before(list);
|
|
126
|
+
next.toggle();
|
|
127
|
+
}
|
|
128
|
+
return false;
|
|
129
|
+
});
|
|
130
|
+
if (localStorage) {
|
|
131
|
+
if (localStorage.summaryCollapsed == "collapse") $('.summary_toggle').click();
|
|
132
|
+
else localStorage.summaryCollapsed = "expand";
|
|
133
|
+
}
|
|
134
|
+
}
|
|
135
|
+
|
|
136
|
+
function fixOutsideWorldLinks() {
|
|
137
|
+
$('a').each(function() {
|
|
138
|
+
if (window.location.host != this.host) this.target = '_parent';
|
|
139
|
+
});
|
|
140
|
+
}
|
|
141
|
+
|
|
142
|
+
function generateTOC() {
|
|
143
|
+
if ($('#filecontents').length === 0) return;
|
|
144
|
+
var _toc = $('<ol class="top"></ol>');
|
|
145
|
+
var show = false;
|
|
146
|
+
var toc = _toc;
|
|
147
|
+
var counter = 0;
|
|
148
|
+
var tags = ['h2', 'h3', 'h4', 'h5', 'h6'];
|
|
149
|
+
var i;
|
|
150
|
+
if ($('#filecontents h1').length > 1) tags.unshift('h1');
|
|
151
|
+
for (i = 0; i < tags.length; i++) { tags[i] = '#filecontents ' + tags[i]; }
|
|
152
|
+
var lastTag = parseInt(tags[0][1], 10);
|
|
153
|
+
$(tags.join(', ')).each(function() {
|
|
154
|
+
if (this.id == "filecontents") return;
|
|
155
|
+
show = true;
|
|
156
|
+
var thisTag = parseInt(this.tagName[1], 10);
|
|
157
|
+
if (this.id.length === 0) {
|
|
158
|
+
var proposedId = $(this).text().replace(/[^a-z0-9-]/ig, '_');
|
|
159
|
+
if ($('#' + proposedId).length > 0) { proposedId += counter; counter++; }
|
|
160
|
+
this.id = proposedId;
|
|
161
|
+
}
|
|
162
|
+
if (thisTag > lastTag) {
|
|
163
|
+
for (i = 0; i < thisTag - lastTag; i++) {
|
|
164
|
+
var tmp = $('<ol/>'); toc.append(tmp); toc = tmp;
|
|
165
|
+
}
|
|
166
|
+
}
|
|
167
|
+
if (thisTag < lastTag) {
|
|
168
|
+
for (i = 0; i < lastTag - thisTag; i++) toc = toc.parent();
|
|
169
|
+
}
|
|
170
|
+
toc.append('<li><a href="#' + this.id + '">' + $(this).text() + '</a></li>');
|
|
171
|
+
lastTag = thisTag;
|
|
172
|
+
});
|
|
173
|
+
if (!show) return;
|
|
174
|
+
html = '<div id="toc"><p class="title"><a class="hide_toc" href="#"><strong>Table of Contents</strong></a> <small>(<a href="#" class="float_toc">left</a>)</small></p></div>';
|
|
175
|
+
$('#content').prepend(html);
|
|
176
|
+
$('#toc').append(_toc);
|
|
177
|
+
$('#toc .hide_toc').toggle(function() {
|
|
178
|
+
$('#toc .top').slideUp('fast');
|
|
179
|
+
$('#toc').toggleClass('hidden');
|
|
180
|
+
$('#toc .title small').toggle();
|
|
181
|
+
}, function() {
|
|
182
|
+
$('#toc .top').slideDown('fast');
|
|
183
|
+
$('#toc').toggleClass('hidden');
|
|
184
|
+
$('#toc .title small').toggle();
|
|
185
|
+
});
|
|
186
|
+
$('#toc .float_toc').toggle(function() {
|
|
187
|
+
$(this).text('float');
|
|
188
|
+
$('#toc').toggleClass('nofloat');
|
|
189
|
+
}, function() {
|
|
190
|
+
$(this).text('left');
|
|
191
|
+
$('#toc').toggleClass('nofloat');
|
|
192
|
+
});
|
|
193
|
+
}
|
|
194
|
+
|
|
195
|
+
$(framesInit);
|
|
196
|
+
$(createSourceLinks);
|
|
197
|
+
$(createDefineLinks);
|
|
198
|
+
$(createFullTreeLinks);
|
|
199
|
+
$(fixBoxInfoHeights);
|
|
200
|
+
$(searchFrameLinks);
|
|
201
|
+
$(linkSummaries);
|
|
202
|
+
$(keyboardShortcuts);
|
|
203
|
+
$(summaryToggle);
|
|
204
|
+
$(fixOutsideWorldLinks);
|
|
205
|
+
$(generateTOC);
|
data/doc/js/full_list.js
ADDED
|
@@ -0,0 +1,167 @@
|
|
|
1
|
+
var inSearch = null;
|
|
2
|
+
var searchIndex = 0;
|
|
3
|
+
var searchCache = [];
|
|
4
|
+
var searchString = '';
|
|
5
|
+
var regexSearchString = '';
|
|
6
|
+
var caseSensitiveMatch = false;
|
|
7
|
+
|
|
8
|
+
RegExp.escape = function(text) {
|
|
9
|
+
return text.replace(/[-[\]{}()*+?.,\\^$|#\s]/g, "\\$&");
|
|
10
|
+
}
|
|
11
|
+
|
|
12
|
+
function fullListSearch() {
|
|
13
|
+
// generate cache
|
|
14
|
+
searchCache = [];
|
|
15
|
+
$('#full_list li').each(function() {
|
|
16
|
+
var link = $(this).find('.object_link a');
|
|
17
|
+
var fullName = link.attr('title').split(' ')[0];
|
|
18
|
+
searchCache.push({name:link.text(), fullName:fullName, node:$(this), link:link});
|
|
19
|
+
});
|
|
20
|
+
|
|
21
|
+
$('#search input').keyup(function() {
|
|
22
|
+
searchString = this.value;
|
|
23
|
+
caseSensitiveMatch = searchString.match(/[A-Z]/) != null;
|
|
24
|
+
regexSearchString = RegExp.escape(searchString);
|
|
25
|
+
if (caseSensitiveMatch) {
|
|
26
|
+
regexSearchString += "|" +
|
|
27
|
+
$.map(searchString.split(''), function(e) { return RegExp.escape(e); }).
|
|
28
|
+
join('.+?');
|
|
29
|
+
}
|
|
30
|
+
if (searchString === "") {
|
|
31
|
+
clearTimeout(inSearch);
|
|
32
|
+
inSearch = null;
|
|
33
|
+
$('ul .search_uncollapsed').removeClass('search_uncollapsed');
|
|
34
|
+
$('#full_list, #content').removeClass('insearch');
|
|
35
|
+
$('#full_list li').removeClass('found').each(function() {
|
|
36
|
+
|
|
37
|
+
var link = $(this).find('.object_link a');
|
|
38
|
+
link.text(link.text());
|
|
39
|
+
});
|
|
40
|
+
if (clicked) {
|
|
41
|
+
clicked.parents('ul').each(function() {
|
|
42
|
+
$(this).removeClass('collapsed').prev().removeClass('collapsed');
|
|
43
|
+
});
|
|
44
|
+
}
|
|
45
|
+
highlight();
|
|
46
|
+
}
|
|
47
|
+
else {
|
|
48
|
+
if (inSearch) clearTimeout(inSearch);
|
|
49
|
+
searchIndex = 0;
|
|
50
|
+
lastRowClass = '';
|
|
51
|
+
$('#full_list, #content').addClass('insearch');
|
|
52
|
+
$('#noresults').text('');
|
|
53
|
+
searchItem();
|
|
54
|
+
}
|
|
55
|
+
});
|
|
56
|
+
|
|
57
|
+
$('#search input').focus();
|
|
58
|
+
$('#full_list').after("<div id='noresults'></div>");
|
|
59
|
+
}
|
|
60
|
+
|
|
61
|
+
var lastRowClass = '';
|
|
62
|
+
function searchItem() {
|
|
63
|
+
for (var i = 0; i < searchCache.length / 50; i++) {
|
|
64
|
+
var item = searchCache[searchIndex];
|
|
65
|
+
var searchName = (searchString.indexOf('::') != -1 ? item.fullName : item.name);
|
|
66
|
+
var matchString = regexSearchString;
|
|
67
|
+
var matchRegexp = new RegExp(matchString, caseSensitiveMatch ? "" : "i");
|
|
68
|
+
if (searchName.match(matchRegexp) == null) {
|
|
69
|
+
item.node.removeClass('found');
|
|
70
|
+
}
|
|
71
|
+
else {
|
|
72
|
+
item.node.css('padding-left', '10px').addClass('found');
|
|
73
|
+
item.node.parents().addClass('search_uncollapsed');
|
|
74
|
+
item.node.removeClass(lastRowClass).addClass(lastRowClass == 'r1' ? 'r2' : 'r1');
|
|
75
|
+
lastRowClass = item.node.hasClass('r1') ? 'r1' : 'r2';
|
|
76
|
+
item.link.html(item.name.replace(matchRegexp, "<strong>$&</strong>"));
|
|
77
|
+
}
|
|
78
|
+
|
|
79
|
+
if (searchCache.length === searchIndex + 1) {
|
|
80
|
+
searchDone();
|
|
81
|
+
return;
|
|
82
|
+
}
|
|
83
|
+
else {
|
|
84
|
+
searchIndex++;
|
|
85
|
+
}
|
|
86
|
+
}
|
|
87
|
+
inSearch = setTimeout('searchItem()', 0);
|
|
88
|
+
}
|
|
89
|
+
|
|
90
|
+
function searchDone() {
|
|
91
|
+
highlight(true);
|
|
92
|
+
if ($('#full_list li:visible').size() === 0) {
|
|
93
|
+
$('#noresults').text('No results were found.').hide().fadeIn();
|
|
94
|
+
}
|
|
95
|
+
else {
|
|
96
|
+
$('#noresults').text('');
|
|
97
|
+
}
|
|
98
|
+
$('#content').removeClass('insearch');
|
|
99
|
+
clearTimeout(inSearch);
|
|
100
|
+
inSearch = null;
|
|
101
|
+
}
|
|
102
|
+
|
|
103
|
+
clicked = null;
|
|
104
|
+
function linkList() {
|
|
105
|
+
$('#full_list li, #full_list li a:last').click(function(evt) {
|
|
106
|
+
if ($(this).hasClass('toggle')) return true;
|
|
107
|
+
if (this.tagName.toLowerCase() == "li") {
|
|
108
|
+
var toggle = $(this).children('a.toggle');
|
|
109
|
+
if (toggle.size() > 0 && evt.pageX < toggle.offset().left) {
|
|
110
|
+
toggle.click();
|
|
111
|
+
return false;
|
|
112
|
+
}
|
|
113
|
+
}
|
|
114
|
+
if (clicked) clicked.removeClass('clicked');
|
|
115
|
+
var win = window.top.frames.main ? window.top.frames.main : window.parent;
|
|
116
|
+
if (this.tagName.toLowerCase() == "a") {
|
|
117
|
+
clicked = $(this).parent('li').addClass('clicked');
|
|
118
|
+
win.location = this.href;
|
|
119
|
+
}
|
|
120
|
+
else {
|
|
121
|
+
clicked = $(this).addClass('clicked');
|
|
122
|
+
win.location = $(this).find('a:last').attr('href');
|
|
123
|
+
}
|
|
124
|
+
return false;
|
|
125
|
+
});
|
|
126
|
+
}
|
|
127
|
+
|
|
128
|
+
function collapse() {
|
|
129
|
+
if (!$('#full_list').hasClass('class')) return;
|
|
130
|
+
$('#full_list.class a.toggle').click(function() {
|
|
131
|
+
$(this).parent().toggleClass('collapsed').next().toggleClass('collapsed');
|
|
132
|
+
highlight();
|
|
133
|
+
return false;
|
|
134
|
+
});
|
|
135
|
+
$('#full_list.class ul').each(function() {
|
|
136
|
+
$(this).addClass('collapsed').prev().addClass('collapsed');
|
|
137
|
+
});
|
|
138
|
+
$('#full_list.class').children().removeClass('collapsed');
|
|
139
|
+
highlight();
|
|
140
|
+
}
|
|
141
|
+
|
|
142
|
+
function highlight(no_padding) {
|
|
143
|
+
var n = 1;
|
|
144
|
+
$('#full_list li:visible').each(function() {
|
|
145
|
+
var next = n == 1 ? 2 : 1;
|
|
146
|
+
$(this).removeClass("r" + next).addClass("r" + n);
|
|
147
|
+
if (!no_padding && $('#full_list').hasClass('class')) {
|
|
148
|
+
$(this).css('padding-left', (10 + $(this).parents('ul').size() * 15) + 'px');
|
|
149
|
+
}
|
|
150
|
+
n = next;
|
|
151
|
+
});
|
|
152
|
+
}
|
|
153
|
+
|
|
154
|
+
function escapeShortcut() {
|
|
155
|
+
$(document).keydown(function(evt) {
|
|
156
|
+
if (evt.which == 27) {
|
|
157
|
+
$('#search_frame', window.top.document).slideUp(100);
|
|
158
|
+
$('#search a', window.top.document).removeClass('active inactive');
|
|
159
|
+
$(window.top).focus();
|
|
160
|
+
}
|
|
161
|
+
});
|
|
162
|
+
}
|
|
163
|
+
|
|
164
|
+
$(escapeShortcut);
|
|
165
|
+
$(fullListSearch);
|
|
166
|
+
$(linkList);
|
|
167
|
+
$(collapse);
|