lims-core 3.2.3
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- checksums.yaml +15 -0
- data/.gitignore +5 -0
- data/.rspec +1 -0
- data/.rvmrc +2 -0
- data/.travis.yml +2 -0
- data/.vimrc +27 -0
- data/.yard_templates/default/layout/html/footer.erb +0 -0
- data/.yardopts +1 -0
- data/Gemfile +54 -0
- data/Gemfile.lock +197 -0
- data/Guardfile +21 -0
- data/Guardfile.tmux +28 -0
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- data/Rakefile +16 -0
- data/config/database.yml +16 -0
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- data/doc/Lims/Core/Persistence/Search/CreateSearch.html +251 -0
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- data/doc/Lims/Core/Persistence/Search/SearchSequelPersistor.html +396 -0
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- data/doc/Lims/Core/Persistence/Sequel/ForTest/Name/NamePersitor.html +143 -0
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- data/doc/_index.html +732 -0
- data/doc/class_list.html +47 -0
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- data/lib/lims-core.rb +29 -0
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- data/lib/lims-core/actions/action.rb +185 -0
- data/lib/lims-core/actions/action_group.rb +54 -0
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- data/lib/lims-core/base.rb +132 -0
- data/lib/lims-core/helpers.rb +41 -0
- data/lib/lims-core/persistence.rb +15 -0
- data/lib/lims-core/persistence/comparison_filter.rb +54 -0
- data/lib/lims-core/persistence/filter.rb +23 -0
- data/lib/lims-core/persistence/identity_map.rb +55 -0
- data/lib/lims-core/persistence/logger/all.rb +5 -0
- data/lib/lims-core/persistence/logger/persistor.rb +35 -0
- data/lib/lims-core/persistence/logger/session.rb +30 -0
- data/lib/lims-core/persistence/logger/store.rb +37 -0
- data/lib/lims-core/persistence/message_bus.rb +131 -0
- data/lib/lims-core/persistence/multi_criteria_filter.rb +50 -0
- data/lib/lims-core/persistence/persist_association_trait.rb +96 -0
- data/lib/lims-core/persistence/persistable_trait.rb +150 -0
- data/lib/lims-core/persistence/persistor.rb +495 -0
- data/lib/lims-core/persistence/resource_state.rb +157 -0
- data/lib/lims-core/persistence/search.rb +3 -0
- data/lib/lims-core/persistence/search/all.rb +3 -0
- data/lib/lims-core/persistence/search/create_search.rb +55 -0
- data/lib/lims-core/persistence/search/search_persistor.rb +45 -0
- data/lib/lims-core/persistence/search/search_sequel_persistor.rb +40 -0
- data/lib/lims-core/persistence/sequel.rb +14 -0
- data/lib/lims-core/persistence/sequel/filters.rb +106 -0
- data/lib/lims-core/persistence/sequel/migrations.rb +14 -0
- data/lib/lims-core/persistence/sequel/migrations/add_audit_tables.rb +147 -0
- data/lib/lims-core/persistence/sequel/migrations/initial.rb +156 -0
- data/lib/lims-core/persistence/sequel/persistor.rb +200 -0
- data/lib/lims-core/persistence/sequel/session.rb +136 -0
- data/lib/lims-core/persistence/sequel/store.rb +37 -0
- data/lib/lims-core/persistence/session.rb +409 -0
- data/lib/lims-core/persistence/state_group.rb +97 -0
- data/lib/lims-core/persistence/state_list.rb +56 -0
- data/lib/lims-core/persistence/store.rb +73 -0
- data/lib/lims-core/persistence/uuid_resource.rb +115 -0
- data/lib/lims-core/persistence/uuid_resource_persistor.rb +43 -0
- data/lib/lims-core/persistence/uuidable.rb +107 -0
- data/lib/lims-core/resource.rb +21 -0
- data/lib/lims-core/subclass_tracker.rb +30 -0
- data/lib/lims-core/version.rb +5 -0
- data/lims-core.gemspec +40 -0
- data/makefile +52 -0
- data/showoff/core-2012-06-11/core/01_slide.md +237 -0
- data/showoff/core-2012-06-11/core/02_slide.md +110 -0
- data/showoff/core-2012-06-11/custom.css +44 -0
- data/showoff/core-2012-06-11/main/01_slide.md +53 -0
- data/showoff/core-2012-06-11/showoff.json +10 -0
- data/showoff/core-2012-06-11/tp1.tpl +1 -0
- data/spec/actions/action_group_spec.rb +39 -0
- data/spec/actions/spec_helper.rb +1 -0
- data/spec/persistence/identity_map_spec.rb +55 -0
- data/spec/persistence/logger/spec_helper.rb +7 -0
- data/spec/persistence/logger/store_spec.rb +48 -0
- data/spec/persistence/message_bus_spec.rb +76 -0
- data/spec/persistence/sequel/session_spec.rb +125 -0
- data/spec/persistence/sequel/spec_helper.rb +39 -0
- data/spec/persistence/sequel/store_shared.rb +25 -0
- data/spec/persistence/sequel/store_spec.rb +22 -0
- data/spec/persistence/session_spec.rb +199 -0
- data/spec/persistence/spec_helper.rb +2 -0
- data/spec/persistence/uuid_resource_spec.rb +80 -0
- data/spec/spec_helper.rb +10 -0
- data/spec/subclass_tracker_sperc.rb +62 -0
- data/utils/constant_tree.rb +29 -0
- data/utils/stack.rb +48 -0
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<dd class="r1"><span class='object_link'><a href="../../../../Array/ArrayLoggerPersistor.html" title="Array::ArrayLoggerPersistor (class)">Array::ArrayLoggerPersistor</a></span></dd>
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<a href="#save_as_aggregation-instance_method" title="#save_as_aggregation (instance method)">- (Object) <strong>save_as_aggregation</strong>(source_id, target, *params) </a>
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<a href="#save_raw_association-instance_method" title="#save_raw_association (instance method)">- (Object) <strong>save_raw_association</strong>(source_id, target_id, *params) </a>
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- (<tt><span class='object_link'><a href="../../../../Object.html" title="Object (class)">Object</a></span></tt>) <strong>save_as_aggregation</strong>(source_id, target, *params) <span class="extras">(private)</span>
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<pre class="code"><span class="info file"># File 'lib/lims-core/persistence/logger/persistor.rb', line 24</span>
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<span class='kw'>def</span> <span class='id save_as_aggregation'>save_as_aggregation</span><span class='lparen'>(</span><span class='id source_id'>source_id</span><span class='comma'>,</span> <span class='id target'>target</span><span class='comma'>,</span> <span class='op'>*</span><span class='id params'>params</span><span class='rparen'>)</span>
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<span class='ivar'>@session</span><span class='period'>.</span><span class='id with_indent'>with_indent</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>"</span><span class='embexpr_beg'>#{</span><span class='id params'>params</span><span class='rbrace'>}</span><span class='tstring_content'> - </span><span class='tstring_end'>"</span></span><span class='rparen'>)</span> <span class='kw'>do</span>
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<span class='kw'>super</span><span class='lparen'>(</span><span class='id source_id'>source_id</span><span class='comma'>,</span> <span class='id target'>target</span><span class='rparen'>)</span>
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- (<tt><span class='object_link'><a href="../../../../Object.html" title="Object (class)">Object</a></span></tt>) <strong>save_raw</strong>(object, *params) <span class="extras">(private)</span>
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<pre class="code"><span class="info file"># File 'lib/lims-core/persistence/logger/persistor.rb', line 15</span>
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<span class='kw'>def</span> <span class='id save_raw'>save_raw</span><span class='lparen'>(</span><span class='id object'>object</span><span class='comma'>,</span> <span class='op'>*</span><span class='id params'>params</span><span class='rparen'>)</span>
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<span class='kw'>case</span> <span class='id object'>object</span>
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<span class='kw'>when</span> <span class='const'>Resource</span> <span class='kw'>then</span> <span class='ivar'>@session</span><span class='period'>.</span><span class='id log'>log</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>"</span><span class='embexpr_beg'>#{</span><span class='id object'>object</span><span class='period'>.</span><span class='id class'>class</span><span class='period'>.</span><span class='id name'>name</span><span class='rbrace'>}</span><span class='tstring_content'>: </span><span class='embexpr_beg'>#{</span><span class='id filter_attributes_on_save'>filter_attributes_on_save</span><span class='lparen'>(</span><span class='id object'>object</span><span class='period'>.</span><span class='id attributes'>attributes</span><span class='rparen'>)</span><span class='rbrace'>}</span><span class='tstring_end'>"</span></span><span class='rparen'>)</span>
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<span class='ivar'>@session</span><span class='period'>.</span><span class='id log'>log</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>"</span><span class='embexpr_beg'>#{</span><span class='id object'>object</span><span class='period'>.</span><span class='id inspect'>inspect</span><span class='rbrace'>}</span><span class='tstring_end'>"</span></span><span class='rparen'>)</span>
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- (<tt><span class='object_link'><a href="../../../../Object.html" title="Object (class)">Object</a></span></tt>) <strong>save_raw_association</strong>(source_id, target_id, *params) <span class="extras">(private)</span>
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<pre class="code"><span class="info file"># File 'lib/lims-core/persistence/logger/persistor.rb', line 30</span>
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<span class='kw'>def</span> <span class='id save_raw_association'>save_raw_association</span><span class='lparen'>(</span><span class='id source_id'>source_id</span><span class='comma'>,</span> <span class='id target_id'>target_id</span><span class='comma'>,</span> <span class='op'>*</span><span class='id params'>params</span><span class='rparen'>)</span>
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<span class='kw'>end</span></pre>
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<span class='title'><span class='object_link'><a href="../../../../Lims.html" title="Lims (module)">Lims</a></span></span> » <span class='title'><span class='object_link'><a href="../../../Core.html" title="Lims::Core (module)">Core</a></span></span> » <span class='title'><span class='object_link'><a href="../../Persistence.html" title="Lims::Core::Persistence (module)">Persistence</a></span></span> » <span class='title'><span class='object_link'><a href="../Logger.html" title="Lims::Core::Persistence::Logger (module)">Logger</a></span></span>
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»
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<pre class="code"><span class="info file"># File 'lib/lims-core/persistence/logger/session.rb', line 13</span>
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<span class='kw'>def</span> <span class='id initialize'>initialize</span><span class='lparen'>(</span><span class='op'>*</span><span class='id args'>args</span><span class='comma'>,</span> <span class='op'>&</span><span class='id block'>block</span><span class='rparen'>)</span>
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<span class='kw'>super</span><span class='lparen'>(</span><span class='op'>*</span><span class='id args'>args</span><span class='comma'>,</span> <span class='op'>&</span><span class='id block'>block</span><span class='rparen'>)</span>
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<pre class="code"><span class="info file"># File 'lib/lims-core/persistence/logger/session.rb', line 12</span>
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</table>
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<div id="instance_method_details" class="method_details_list">
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<h2>Instance Method Details</h2>
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<div class="method_details first">
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<p class="signature first" id="log-instance_method">
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- (<tt><span class='object_link'><a href="../../../../Object.html" title="Object (class)">Object</a></span></tt>) <strong>log</strong>(msg)
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+
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</p><table class="source_code">
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<tr>
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<td>
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<pre class="lines">
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18
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19
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20</pre>
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</td>
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<td>
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375
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<pre class="code"><span class="info file"># File 'lib/lims-core/persistence/logger/session.rb', line 18</span>
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<span class='kw'>def</span> <span class='id log'>log</span><span class='lparen'>(</span><span class='id msg'>msg</span><span class='rparen'>)</span>
|
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<span class='ivar'>@store</span><span class='period'>.</span><span class='id log'>log</span><span class='lparen'>(</span><span class='id indent_level'>indent_level</span><span class='op'>+</span><span class='id msg'>msg</span><span class='rparen'>)</span>
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<span class='kw'>end</span></pre>
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</td>
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</tr>
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</table>
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</div>
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385
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<div class="method_details ">
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<p class="signature " id="with_indent-instance_method">
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387
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+
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388
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- (<tt><span class='object_link'><a href="../../../../Object.html" title="Object (class)">Object</a></span></tt>) <strong>with_indent</strong>(indent = " - ", &block)
|
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389
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+
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390
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+
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+
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</p><div class="docstring">
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<div class="discussion">
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395
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<p>Execute a block with the specified indent level indicator.</p>
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</div>
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</div>
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<div class="tags">
|
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401
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<h3>Parameters:</h3>
|
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<ul class="param">
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+
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+
<li>
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405
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|
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406
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+
<span class='name'>indent</span>
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407
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+
|
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408
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+
|
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409
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+
<span class='type'>(<tt>String</tt>)</span>
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410
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+
|
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411
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+
|
|
412
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+
<em class="default">(defaults to: <tt>" - "</tt>)</em>
|
|
413
|
+
|
|
414
|
+
|
|
415
|
+
—
|
|
416
|
+
<div class='inline'>
|
|
417
|
+
<p>the indent level indicator</p>
|
|
418
|
+
</div>
|
|
419
|
+
|
|
420
|
+
</li>
|
|
421
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+
|
|
422
|
+
</ul>
|
|
423
|
+
|
|
424
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|
|
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|
+
</div><table class="source_code">
|
|
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|
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<tr>
|
|
427
|
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<td>
|
|
428
|
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<pre class="lines">
|
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429
|
+
|
|
430
|
+
|
|
431
|
+
24
|
|
432
|
+
25
|
|
433
|
+
26</pre>
|
|
434
|
+
</td>
|
|
435
|
+
<td>
|
|
436
|
+
<pre class="code"><span class="info file"># File 'lib/lims-core/persistence/logger/session.rb', line 24</span>
|
|
437
|
+
|
|
438
|
+
<span class='kw'>def</span> <span class='id with_indent'>with_indent</span><span class='lparen'>(</span><span class='id indent'>indent</span><span class='op'>=</span><span class='tstring'><span class='tstring_beg'>"</span><span class='tstring_content'> - </span><span class='tstring_end'>"</span></span><span class='comma'>,</span> <span class='op'>&</span><span class='id block'>block</span><span class='rparen'>)</span>
|
|
439
|
+
<span class='id temporarily'>temporarily</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>'</span><span class='tstring_content'>@indent_level</span><span class='tstring_end'>'</span></span> <span class='op'>=></span> <span class='ivar'>@indent_level</span><span class='op'>+</span><span class='id indent'>indent</span><span class='comma'>,</span> <span class='op'>&</span><span class='id block'>block</span><span class='rparen'>)</span>
|
|
440
|
+
<span class='kw'>end</span></pre>
|
|
441
|
+
</td>
|
|
442
|
+
</tr>
|
|
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|
+
</table>
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|
+
</div>
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|
+
|
|
446
|
+
</div>
|
|
447
|
+
|
|
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|
+
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|
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|
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|
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</body>
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</html>
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