faiss 0.1.0 → 0.1.1
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- checksums.yaml +4 -4
- data/CHANGELOG.md +5 -0
- data/README.md +103 -3
- data/ext/faiss/ext.cpp +99 -32
- data/ext/faiss/extconf.rb +12 -2
- data/lib/faiss/ext.bundle +0 -0
- data/lib/faiss/index.rb +3 -3
- data/lib/faiss/index_binary.rb +3 -3
- data/lib/faiss/kmeans.rb +1 -1
- data/lib/faiss/pca_matrix.rb +2 -2
- data/lib/faiss/product_quantizer.rb +3 -3
- data/lib/faiss/version.rb +1 -1
- data/vendor/faiss/AutoTune.cpp +719 -0
- data/vendor/faiss/AutoTune.h +212 -0
- data/vendor/faiss/Clustering.cpp +261 -0
- data/vendor/faiss/Clustering.h +101 -0
- data/vendor/faiss/IVFlib.cpp +339 -0
- data/vendor/faiss/IVFlib.h +132 -0
- data/vendor/faiss/Index.cpp +171 -0
- data/vendor/faiss/Index.h +261 -0
- data/vendor/faiss/Index2Layer.cpp +437 -0
- data/vendor/faiss/Index2Layer.h +85 -0
- data/vendor/faiss/IndexBinary.cpp +77 -0
- data/vendor/faiss/IndexBinary.h +163 -0
- data/vendor/faiss/IndexBinaryFlat.cpp +83 -0
- data/vendor/faiss/IndexBinaryFlat.h +54 -0
- data/vendor/faiss/IndexBinaryFromFloat.cpp +78 -0
- data/vendor/faiss/IndexBinaryFromFloat.h +52 -0
- data/vendor/faiss/IndexBinaryHNSW.cpp +325 -0
- data/vendor/faiss/IndexBinaryHNSW.h +56 -0
- data/vendor/faiss/IndexBinaryIVF.cpp +671 -0
- data/vendor/faiss/IndexBinaryIVF.h +211 -0
- data/vendor/faiss/IndexFlat.cpp +508 -0
- data/vendor/faiss/IndexFlat.h +175 -0
- data/vendor/faiss/IndexHNSW.cpp +1090 -0
- data/vendor/faiss/IndexHNSW.h +170 -0
- data/vendor/faiss/IndexIVF.cpp +909 -0
- data/vendor/faiss/IndexIVF.h +353 -0
- data/vendor/faiss/IndexIVFFlat.cpp +502 -0
- data/vendor/faiss/IndexIVFFlat.h +118 -0
- data/vendor/faiss/IndexIVFPQ.cpp +1207 -0
- data/vendor/faiss/IndexIVFPQ.h +161 -0
- data/vendor/faiss/IndexIVFPQR.cpp +219 -0
- data/vendor/faiss/IndexIVFPQR.h +65 -0
- data/vendor/faiss/IndexIVFSpectralHash.cpp +331 -0
- data/vendor/faiss/IndexIVFSpectralHash.h +75 -0
- data/vendor/faiss/IndexLSH.cpp +225 -0
- data/vendor/faiss/IndexLSH.h +87 -0
- data/vendor/faiss/IndexLattice.cpp +143 -0
- data/vendor/faiss/IndexLattice.h +68 -0
- data/vendor/faiss/IndexPQ.cpp +1188 -0
- data/vendor/faiss/IndexPQ.h +199 -0
- data/vendor/faiss/IndexPreTransform.cpp +288 -0
- data/vendor/faiss/IndexPreTransform.h +91 -0
- data/vendor/faiss/IndexReplicas.cpp +123 -0
- data/vendor/faiss/IndexReplicas.h +76 -0
- data/vendor/faiss/IndexScalarQuantizer.cpp +317 -0
- data/vendor/faiss/IndexScalarQuantizer.h +127 -0
- data/vendor/faiss/IndexShards.cpp +317 -0
- data/vendor/faiss/IndexShards.h +100 -0
- data/vendor/faiss/InvertedLists.cpp +623 -0
- data/vendor/faiss/InvertedLists.h +334 -0
- data/vendor/faiss/LICENSE +21 -0
- data/vendor/faiss/MatrixStats.cpp +252 -0
- data/vendor/faiss/MatrixStats.h +62 -0
- data/vendor/faiss/MetaIndexes.cpp +351 -0
- data/vendor/faiss/MetaIndexes.h +126 -0
- data/vendor/faiss/OnDiskInvertedLists.cpp +674 -0
- data/vendor/faiss/OnDiskInvertedLists.h +127 -0
- data/vendor/faiss/VectorTransform.cpp +1157 -0
- data/vendor/faiss/VectorTransform.h +322 -0
- data/vendor/faiss/c_api/AutoTune_c.cpp +83 -0
- data/vendor/faiss/c_api/AutoTune_c.h +64 -0
- data/vendor/faiss/c_api/Clustering_c.cpp +139 -0
- data/vendor/faiss/c_api/Clustering_c.h +117 -0
- data/vendor/faiss/c_api/IndexFlat_c.cpp +140 -0
- data/vendor/faiss/c_api/IndexFlat_c.h +115 -0
- data/vendor/faiss/c_api/IndexIVFFlat_c.cpp +64 -0
- data/vendor/faiss/c_api/IndexIVFFlat_c.h +58 -0
- data/vendor/faiss/c_api/IndexIVF_c.cpp +92 -0
- data/vendor/faiss/c_api/IndexIVF_c.h +135 -0
- data/vendor/faiss/c_api/IndexLSH_c.cpp +37 -0
- data/vendor/faiss/c_api/IndexLSH_c.h +40 -0
- data/vendor/faiss/c_api/IndexShards_c.cpp +44 -0
- data/vendor/faiss/c_api/IndexShards_c.h +42 -0
- data/vendor/faiss/c_api/Index_c.cpp +105 -0
- data/vendor/faiss/c_api/Index_c.h +183 -0
- data/vendor/faiss/c_api/MetaIndexes_c.cpp +49 -0
- data/vendor/faiss/c_api/MetaIndexes_c.h +49 -0
- data/vendor/faiss/c_api/clone_index_c.cpp +23 -0
- data/vendor/faiss/c_api/clone_index_c.h +32 -0
- data/vendor/faiss/c_api/error_c.h +42 -0
- data/vendor/faiss/c_api/error_impl.cpp +27 -0
- data/vendor/faiss/c_api/error_impl.h +16 -0
- data/vendor/faiss/c_api/faiss_c.h +58 -0
- data/vendor/faiss/c_api/gpu/GpuAutoTune_c.cpp +96 -0
- data/vendor/faiss/c_api/gpu/GpuAutoTune_c.h +56 -0
- data/vendor/faiss/c_api/gpu/GpuClonerOptions_c.cpp +52 -0
- data/vendor/faiss/c_api/gpu/GpuClonerOptions_c.h +68 -0
- data/vendor/faiss/c_api/gpu/GpuIndex_c.cpp +17 -0
- data/vendor/faiss/c_api/gpu/GpuIndex_c.h +30 -0
- data/vendor/faiss/c_api/gpu/GpuIndicesOptions_c.h +38 -0
- data/vendor/faiss/c_api/gpu/GpuResources_c.cpp +86 -0
- data/vendor/faiss/c_api/gpu/GpuResources_c.h +66 -0
- data/vendor/faiss/c_api/gpu/StandardGpuResources_c.cpp +54 -0
- data/vendor/faiss/c_api/gpu/StandardGpuResources_c.h +53 -0
- data/vendor/faiss/c_api/gpu/macros_impl.h +42 -0
- data/vendor/faiss/c_api/impl/AuxIndexStructures_c.cpp +220 -0
- data/vendor/faiss/c_api/impl/AuxIndexStructures_c.h +149 -0
- data/vendor/faiss/c_api/index_factory_c.cpp +26 -0
- data/vendor/faiss/c_api/index_factory_c.h +30 -0
- data/vendor/faiss/c_api/index_io_c.cpp +42 -0
- data/vendor/faiss/c_api/index_io_c.h +50 -0
- data/vendor/faiss/c_api/macros_impl.h +110 -0
- data/vendor/faiss/clone_index.cpp +147 -0
- data/vendor/faiss/clone_index.h +38 -0
- data/vendor/faiss/demos/demo_imi_flat.cpp +151 -0
- data/vendor/faiss/demos/demo_imi_pq.cpp +199 -0
- data/vendor/faiss/demos/demo_ivfpq_indexing.cpp +146 -0
- data/vendor/faiss/demos/demo_sift1M.cpp +252 -0
- data/vendor/faiss/gpu/GpuAutoTune.cpp +95 -0
- data/vendor/faiss/gpu/GpuAutoTune.h +27 -0
- data/vendor/faiss/gpu/GpuCloner.cpp +403 -0
- data/vendor/faiss/gpu/GpuCloner.h +82 -0
- data/vendor/faiss/gpu/GpuClonerOptions.cpp +28 -0
- data/vendor/faiss/gpu/GpuClonerOptions.h +53 -0
- data/vendor/faiss/gpu/GpuDistance.h +52 -0
- data/vendor/faiss/gpu/GpuFaissAssert.h +29 -0
- data/vendor/faiss/gpu/GpuIndex.h +148 -0
- data/vendor/faiss/gpu/GpuIndexBinaryFlat.h +89 -0
- data/vendor/faiss/gpu/GpuIndexFlat.h +190 -0
- data/vendor/faiss/gpu/GpuIndexIVF.h +89 -0
- data/vendor/faiss/gpu/GpuIndexIVFFlat.h +85 -0
- data/vendor/faiss/gpu/GpuIndexIVFPQ.h +143 -0
- data/vendor/faiss/gpu/GpuIndexIVFScalarQuantizer.h +100 -0
- data/vendor/faiss/gpu/GpuIndicesOptions.h +30 -0
- data/vendor/faiss/gpu/GpuResources.cpp +52 -0
- data/vendor/faiss/gpu/GpuResources.h +73 -0
- data/vendor/faiss/gpu/StandardGpuResources.cpp +295 -0
- data/vendor/faiss/gpu/StandardGpuResources.h +114 -0
- data/vendor/faiss/gpu/impl/RemapIndices.cpp +43 -0
- data/vendor/faiss/gpu/impl/RemapIndices.h +24 -0
- data/vendor/faiss/gpu/perf/IndexWrapper-inl.h +71 -0
- data/vendor/faiss/gpu/perf/IndexWrapper.h +39 -0
- data/vendor/faiss/gpu/perf/PerfClustering.cpp +115 -0
- data/vendor/faiss/gpu/perf/PerfIVFPQAdd.cpp +139 -0
- data/vendor/faiss/gpu/perf/WriteIndex.cpp +102 -0
- data/vendor/faiss/gpu/test/TestGpuIndexBinaryFlat.cpp +130 -0
- data/vendor/faiss/gpu/test/TestGpuIndexFlat.cpp +371 -0
- data/vendor/faiss/gpu/test/TestGpuIndexIVFFlat.cpp +550 -0
- data/vendor/faiss/gpu/test/TestGpuIndexIVFPQ.cpp +450 -0
- data/vendor/faiss/gpu/test/TestGpuMemoryException.cpp +84 -0
- data/vendor/faiss/gpu/test/TestUtils.cpp +315 -0
- data/vendor/faiss/gpu/test/TestUtils.h +93 -0
- data/vendor/faiss/gpu/test/demo_ivfpq_indexing_gpu.cpp +159 -0
- data/vendor/faiss/gpu/utils/DeviceMemory.cpp +77 -0
- data/vendor/faiss/gpu/utils/DeviceMemory.h +71 -0
- data/vendor/faiss/gpu/utils/DeviceUtils.h +185 -0
- data/vendor/faiss/gpu/utils/MemorySpace.cpp +89 -0
- data/vendor/faiss/gpu/utils/MemorySpace.h +44 -0
- data/vendor/faiss/gpu/utils/StackDeviceMemory.cpp +239 -0
- data/vendor/faiss/gpu/utils/StackDeviceMemory.h +129 -0
- data/vendor/faiss/gpu/utils/StaticUtils.h +83 -0
- data/vendor/faiss/gpu/utils/Timer.cpp +60 -0
- data/vendor/faiss/gpu/utils/Timer.h +52 -0
- data/vendor/faiss/impl/AuxIndexStructures.cpp +305 -0
- data/vendor/faiss/impl/AuxIndexStructures.h +246 -0
- data/vendor/faiss/impl/FaissAssert.h +95 -0
- data/vendor/faiss/impl/FaissException.cpp +66 -0
- data/vendor/faiss/impl/FaissException.h +71 -0
- data/vendor/faiss/impl/HNSW.cpp +818 -0
- data/vendor/faiss/impl/HNSW.h +275 -0
- data/vendor/faiss/impl/PolysemousTraining.cpp +953 -0
- data/vendor/faiss/impl/PolysemousTraining.h +158 -0
- data/vendor/faiss/impl/ProductQuantizer.cpp +876 -0
- data/vendor/faiss/impl/ProductQuantizer.h +242 -0
- data/vendor/faiss/impl/ScalarQuantizer.cpp +1628 -0
- data/vendor/faiss/impl/ScalarQuantizer.h +120 -0
- data/vendor/faiss/impl/ThreadedIndex-inl.h +192 -0
- data/vendor/faiss/impl/ThreadedIndex.h +80 -0
- data/vendor/faiss/impl/index_read.cpp +793 -0
- data/vendor/faiss/impl/index_write.cpp +558 -0
- data/vendor/faiss/impl/io.cpp +142 -0
- data/vendor/faiss/impl/io.h +98 -0
- data/vendor/faiss/impl/lattice_Zn.cpp +712 -0
- data/vendor/faiss/impl/lattice_Zn.h +199 -0
- data/vendor/faiss/index_factory.cpp +392 -0
- data/vendor/faiss/index_factory.h +25 -0
- data/vendor/faiss/index_io.h +75 -0
- data/vendor/faiss/misc/test_blas.cpp +84 -0
- data/vendor/faiss/tests/test_binary_flat.cpp +64 -0
- data/vendor/faiss/tests/test_dealloc_invlists.cpp +183 -0
- data/vendor/faiss/tests/test_ivfpq_codec.cpp +67 -0
- data/vendor/faiss/tests/test_ivfpq_indexing.cpp +98 -0
- data/vendor/faiss/tests/test_lowlevel_ivf.cpp +566 -0
- data/vendor/faiss/tests/test_merge.cpp +258 -0
- data/vendor/faiss/tests/test_omp_threads.cpp +14 -0
- data/vendor/faiss/tests/test_ondisk_ivf.cpp +220 -0
- data/vendor/faiss/tests/test_pairs_decoding.cpp +189 -0
- data/vendor/faiss/tests/test_params_override.cpp +231 -0
- data/vendor/faiss/tests/test_pq_encoding.cpp +98 -0
- data/vendor/faiss/tests/test_sliding_ivf.cpp +240 -0
- data/vendor/faiss/tests/test_threaded_index.cpp +253 -0
- data/vendor/faiss/tests/test_transfer_invlists.cpp +159 -0
- data/vendor/faiss/tutorial/cpp/1-Flat.cpp +98 -0
- data/vendor/faiss/tutorial/cpp/2-IVFFlat.cpp +81 -0
- data/vendor/faiss/tutorial/cpp/3-IVFPQ.cpp +93 -0
- data/vendor/faiss/tutorial/cpp/4-GPU.cpp +119 -0
- data/vendor/faiss/tutorial/cpp/5-Multiple-GPUs.cpp +99 -0
- data/vendor/faiss/utils/Heap.cpp +122 -0
- data/vendor/faiss/utils/Heap.h +495 -0
- data/vendor/faiss/utils/WorkerThread.cpp +126 -0
- data/vendor/faiss/utils/WorkerThread.h +61 -0
- data/vendor/faiss/utils/distances.cpp +765 -0
- data/vendor/faiss/utils/distances.h +243 -0
- data/vendor/faiss/utils/distances_simd.cpp +809 -0
- data/vendor/faiss/utils/extra_distances.cpp +336 -0
- data/vendor/faiss/utils/extra_distances.h +54 -0
- data/vendor/faiss/utils/hamming-inl.h +472 -0
- data/vendor/faiss/utils/hamming.cpp +792 -0
- data/vendor/faiss/utils/hamming.h +220 -0
- data/vendor/faiss/utils/random.cpp +192 -0
- data/vendor/faiss/utils/random.h +60 -0
- data/vendor/faiss/utils/utils.cpp +783 -0
- data/vendor/faiss/utils/utils.h +181 -0
- metadata +216 -2
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/**
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* Copyright (c) Facebook, Inc. and its affiliates.
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*
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* This source code is licensed under the MIT license found in the
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* LICENSE file in the root directory of this source tree.
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*/
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// -*- c++ -*-
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/*
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* Implementation of Hamming related functions (distances, smallest distance
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* selection with regular heap|radix and probabilistic heap|radix.
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*
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* IMPLEMENTATION NOTES
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* Bitvectors are generally assumed to be multiples of 64 bits.
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*
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* hamdis_t is used for distances because at this time
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* it is not clear how we will need to balance
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* - flexibility in vector size (unclear more than 2^16 or even 2^8 bitvectors)
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* - memory usage
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* - cache-misses when dealing with large volumes of data (lower bits is better)
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*
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* The hamdis_t should optimally be compatibe with one of the Torch Storage
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* (Byte,Short,Long) and therefore should be signed for 2-bytes and 4-bytes
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*/
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#include <faiss/utils/hamming.h>
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#include <vector>
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#include <memory>
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#include <stdlib.h>
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#include <stdio.h>
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#include <math.h>
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#include <assert.h>
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#include <limits.h>
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#include <faiss/utils/Heap.h>
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#include <faiss/impl/FaissAssert.h>
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#include <faiss/utils/utils.h>
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static const size_t BLOCKSIZE_QUERY = 8192;
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namespace faiss {
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size_t hamming_batch_size = 65536;
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static const uint8_t hamdis_tab_ham_bytes[256] = {
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0, 1, 1, 2, 1, 2, 2, 3, 1, 2, 2, 3, 2, 3, 3, 4,
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1, 2, 2, 3, 2, 3, 3, 4, 2, 3, 3, 4, 3, 4, 4, 5,
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1, 2, 2, 3, 2, 3, 3, 4, 2, 3, 3, 4, 3, 4, 4, 5,
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2, 3, 3, 4, 3, 4, 4, 5, 3, 4, 4, 5, 4, 5, 5, 6,
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1, 2, 2, 3, 2, 3, 3, 4, 2, 3, 3, 4, 3, 4, 4, 5,
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2, 3, 3, 4, 3, 4, 4, 5, 3, 4, 4, 5, 4, 5, 5, 6,
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2, 3, 3, 4, 3, 4, 4, 5, 3, 4, 4, 5, 4, 5, 5, 6,
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3, 4, 4, 5, 4, 5, 5, 6, 4, 5, 5, 6, 5, 6, 6, 7,
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1, 2, 2, 3, 2, 3, 3, 4, 2, 3, 3, 4, 3, 4, 4, 5,
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2, 3, 3, 4, 3, 4, 4, 5, 3, 4, 4, 5, 4, 5, 5, 6,
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2, 3, 3, 4, 3, 4, 4, 5, 3, 4, 4, 5, 4, 5, 5, 6,
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3, 4, 4, 5, 4, 5, 5, 6, 4, 5, 5, 6, 5, 6, 6, 7,
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2, 3, 3, 4, 3, 4, 4, 5, 3, 4, 4, 5, 4, 5, 5, 6,
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3, 4, 4, 5, 4, 5, 5, 6, 4, 5, 5, 6, 5, 6, 6, 7,
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3, 4, 4, 5, 4, 5, 5, 6, 4, 5, 5, 6, 5, 6, 6, 7,
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4, 5, 5, 6, 5, 6, 6, 7, 5, 6, 6, 7, 6, 7, 7, 8
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};
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/* Elementary Hamming distance computation: unoptimized */
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template <size_t nbits, typename T>
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T hamming (const uint8_t *bs1,
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const uint8_t *bs2)
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{
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const size_t nbytes = nbits / 8;
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size_t i;
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T h = 0;
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for (i = 0; i < nbytes; i++)
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h += (T) hamdis_tab_ham_bytes[bs1[i]^bs2[i]];
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return h;
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}
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/* Hamming distances for multiples of 64 bits */
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template <size_t nbits>
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hamdis_t hamming (const uint64_t * bs1, const uint64_t * bs2)
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{
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const size_t nwords = nbits / 64;
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size_t i;
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hamdis_t h = 0;
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for (i = 0; i < nwords; i++)
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h += popcount64 (bs1[i] ^ bs2[i]);
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return h;
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}
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/* specialized (optimized) functions */
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template <>
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hamdis_t hamming<64> (const uint64_t * pa, const uint64_t * pb)
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{
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return popcount64 (pa[0] ^ pb[0]);
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}
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template <>
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hamdis_t hamming<128> (const uint64_t *pa, const uint64_t *pb)
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{
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return popcount64 (pa[0] ^ pb[0]) + popcount64(pa[1] ^ pb[1]);
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}
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template <>
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hamdis_t hamming<256> (const uint64_t * pa, const uint64_t * pb)
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{
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return popcount64 (pa[0] ^ pb[0])
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+ popcount64 (pa[1] ^ pb[1])
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+ popcount64 (pa[2] ^ pb[2])
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+ popcount64 (pa[3] ^ pb[3]);
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}
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/* Hamming distances for multiple of 64 bits */
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hamdis_t hamming (
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const uint64_t * bs1,
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const uint64_t * bs2,
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size_t nwords)
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{
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size_t i;
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hamdis_t h = 0;
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for (i = 0; i < nwords; i++)
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h += popcount64 (bs1[i] ^ bs2[i]);
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return h;
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}
|
133
|
+
|
134
|
+
|
135
|
+
|
136
|
+
template <size_t nbits>
|
137
|
+
void hammings (
|
138
|
+
const uint64_t * bs1,
|
139
|
+
const uint64_t * bs2,
|
140
|
+
size_t n1, size_t n2,
|
141
|
+
hamdis_t * dis)
|
142
|
+
|
143
|
+
{
|
144
|
+
size_t i, j;
|
145
|
+
const size_t nwords = nbits / 64;
|
146
|
+
for (i = 0; i < n1; i++) {
|
147
|
+
const uint64_t * __restrict bs1_ = bs1 + i * nwords;
|
148
|
+
hamdis_t * __restrict dis_ = dis + i * n2;
|
149
|
+
for (j = 0; j < n2; j++)
|
150
|
+
dis_[j] = hamming<nbits>(bs1_, bs2 + j * nwords);
|
151
|
+
}
|
152
|
+
}
|
153
|
+
|
154
|
+
|
155
|
+
|
156
|
+
void hammings (
|
157
|
+
const uint64_t * bs1,
|
158
|
+
const uint64_t * bs2,
|
159
|
+
size_t n1,
|
160
|
+
size_t n2,
|
161
|
+
size_t nwords,
|
162
|
+
hamdis_t * __restrict dis)
|
163
|
+
{
|
164
|
+
size_t i, j;
|
165
|
+
n1 *= nwords;
|
166
|
+
n2 *= nwords;
|
167
|
+
for (i = 0; i < n1; i+=nwords) {
|
168
|
+
const uint64_t * bs1_ = bs1+i;
|
169
|
+
for (j = 0; j < n2; j+=nwords)
|
170
|
+
dis[j] = hamming (bs1_, bs2+j, nwords);
|
171
|
+
}
|
172
|
+
}
|
173
|
+
|
174
|
+
|
175
|
+
|
176
|
+
|
177
|
+
/* Count number of matches given a max threshold */
|
178
|
+
template <size_t nbits>
|
179
|
+
void hamming_count_thres (
|
180
|
+
const uint64_t * bs1,
|
181
|
+
const uint64_t * bs2,
|
182
|
+
size_t n1,
|
183
|
+
size_t n2,
|
184
|
+
hamdis_t ht,
|
185
|
+
size_t * nptr)
|
186
|
+
{
|
187
|
+
const size_t nwords = nbits / 64;
|
188
|
+
size_t i, j, posm = 0;
|
189
|
+
const uint64_t * bs2_ = bs2;
|
190
|
+
|
191
|
+
for (i = 0; i < n1; i++) {
|
192
|
+
bs2 = bs2_;
|
193
|
+
for (j = 0; j < n2; j++) {
|
194
|
+
/* collect the match only if this satisfies the threshold */
|
195
|
+
if (hamming <nbits> (bs1, bs2) <= ht)
|
196
|
+
posm++;
|
197
|
+
bs2 += nwords;
|
198
|
+
}
|
199
|
+
bs1 += nwords; /* next signature */
|
200
|
+
}
|
201
|
+
*nptr = posm;
|
202
|
+
}
|
203
|
+
|
204
|
+
|
205
|
+
template <size_t nbits>
|
206
|
+
void crosshamming_count_thres (
|
207
|
+
const uint64_t * dbs,
|
208
|
+
size_t n,
|
209
|
+
int ht,
|
210
|
+
size_t * nptr)
|
211
|
+
{
|
212
|
+
const size_t nwords = nbits / 64;
|
213
|
+
size_t i, j, posm = 0;
|
214
|
+
const uint64_t * bs1 = dbs;
|
215
|
+
for (i = 0; i < n; i++) {
|
216
|
+
const uint64_t * bs2 = bs1 + 2;
|
217
|
+
for (j = i + 1; j < n; j++) {
|
218
|
+
/* collect the match only if this satisfies the threshold */
|
219
|
+
if (hamming <nbits> (bs1, bs2) <= ht)
|
220
|
+
posm++;
|
221
|
+
bs2 += nwords;
|
222
|
+
}
|
223
|
+
bs1 += nwords;
|
224
|
+
}
|
225
|
+
*nptr = posm;
|
226
|
+
}
|
227
|
+
|
228
|
+
|
229
|
+
template <size_t nbits>
|
230
|
+
size_t match_hamming_thres (
|
231
|
+
const uint64_t * bs1,
|
232
|
+
const uint64_t * bs2,
|
233
|
+
size_t n1,
|
234
|
+
size_t n2,
|
235
|
+
int ht,
|
236
|
+
int64_t * idx,
|
237
|
+
hamdis_t * hams)
|
238
|
+
{
|
239
|
+
const size_t nwords = nbits / 64;
|
240
|
+
size_t i, j, posm = 0;
|
241
|
+
hamdis_t h;
|
242
|
+
const uint64_t * bs2_ = bs2;
|
243
|
+
for (i = 0; i < n1; i++) {
|
244
|
+
bs2 = bs2_;
|
245
|
+
for (j = 0; j < n2; j++) {
|
246
|
+
/* Here perform the real work of computing the distance */
|
247
|
+
h = hamming <nbits> (bs1, bs2);
|
248
|
+
|
249
|
+
/* collect the match only if this satisfies the threshold */
|
250
|
+
if (h <= ht) {
|
251
|
+
/* Enough space to store another match ? */
|
252
|
+
*idx = i; idx++;
|
253
|
+
*idx = j; idx++;
|
254
|
+
*hams = h;
|
255
|
+
hams++;
|
256
|
+
posm++;
|
257
|
+
}
|
258
|
+
bs2+=nwords; /* next signature */
|
259
|
+
}
|
260
|
+
bs1+=nwords;
|
261
|
+
}
|
262
|
+
return posm;
|
263
|
+
}
|
264
|
+
|
265
|
+
|
266
|
+
/* Return closest neighbors w.r.t Hamming distance, using a heap. */
|
267
|
+
template <class HammingComputer>
|
268
|
+
static
|
269
|
+
void hammings_knn_hc (
|
270
|
+
int bytes_per_code,
|
271
|
+
int_maxheap_array_t * ha,
|
272
|
+
const uint8_t * bs1,
|
273
|
+
const uint8_t * bs2,
|
274
|
+
size_t n2,
|
275
|
+
bool order = true,
|
276
|
+
bool init_heap = true)
|
277
|
+
{
|
278
|
+
size_t k = ha->k;
|
279
|
+
if (init_heap) ha->heapify ();
|
280
|
+
|
281
|
+
const size_t block_size = hamming_batch_size;
|
282
|
+
for (size_t j0 = 0; j0 < n2; j0 += block_size) {
|
283
|
+
const size_t j1 = std::min(j0 + block_size, n2);
|
284
|
+
#pragma omp parallel for
|
285
|
+
for (size_t i = 0; i < ha->nh; i++) {
|
286
|
+
HammingComputer hc (bs1 + i * bytes_per_code, bytes_per_code);
|
287
|
+
|
288
|
+
const uint8_t * bs2_ = bs2 + j0 * bytes_per_code;
|
289
|
+
hamdis_t dis;
|
290
|
+
hamdis_t * __restrict bh_val_ = ha->val + i * k;
|
291
|
+
int64_t * __restrict bh_ids_ = ha->ids + i * k;
|
292
|
+
size_t j;
|
293
|
+
for (j = j0; j < j1; j++, bs2_+= bytes_per_code) {
|
294
|
+
dis = hc.hamming (bs2_);
|
295
|
+
if (dis < bh_val_[0]) {
|
296
|
+
faiss::maxheap_pop<hamdis_t> (k, bh_val_, bh_ids_);
|
297
|
+
faiss::maxheap_push<hamdis_t> (k, bh_val_, bh_ids_, dis, j);
|
298
|
+
}
|
299
|
+
}
|
300
|
+
}
|
301
|
+
}
|
302
|
+
if (order) ha->reorder ();
|
303
|
+
}
|
304
|
+
|
305
|
+
/* Return closest neighbors w.r.t Hamming distance, using max count. */
|
306
|
+
template <class HammingComputer>
|
307
|
+
static
|
308
|
+
void hammings_knn_mc (
|
309
|
+
int bytes_per_code,
|
310
|
+
const uint8_t *a,
|
311
|
+
const uint8_t *b,
|
312
|
+
size_t na,
|
313
|
+
size_t nb,
|
314
|
+
size_t k,
|
315
|
+
int32_t *distances,
|
316
|
+
int64_t *labels)
|
317
|
+
{
|
318
|
+
const int nBuckets = bytes_per_code * 8 + 1;
|
319
|
+
std::vector<int> all_counters(na * nBuckets, 0);
|
320
|
+
std::unique_ptr<int64_t[]> all_ids_per_dis(new int64_t[na * nBuckets * k]);
|
321
|
+
|
322
|
+
std::vector<HCounterState<HammingComputer>> cs;
|
323
|
+
for (size_t i = 0; i < na; ++i) {
|
324
|
+
cs.push_back(HCounterState<HammingComputer>(
|
325
|
+
all_counters.data() + i * nBuckets,
|
326
|
+
all_ids_per_dis.get() + i * nBuckets * k,
|
327
|
+
a + i * bytes_per_code,
|
328
|
+
8 * bytes_per_code,
|
329
|
+
k
|
330
|
+
));
|
331
|
+
}
|
332
|
+
|
333
|
+
const size_t block_size = hamming_batch_size;
|
334
|
+
for (size_t j0 = 0; j0 < nb; j0 += block_size) {
|
335
|
+
const size_t j1 = std::min(j0 + block_size, nb);
|
336
|
+
#pragma omp parallel for
|
337
|
+
for (size_t i = 0; i < na; ++i) {
|
338
|
+
for (size_t j = j0; j < j1; ++j) {
|
339
|
+
cs[i].update_counter(b + j * bytes_per_code, j);
|
340
|
+
}
|
341
|
+
}
|
342
|
+
}
|
343
|
+
|
344
|
+
for (size_t i = 0; i < na; ++i) {
|
345
|
+
HCounterState<HammingComputer>& csi = cs[i];
|
346
|
+
|
347
|
+
int nres = 0;
|
348
|
+
for (int b = 0; b < nBuckets && nres < k; b++) {
|
349
|
+
for (int l = 0; l < csi.counters[b] && nres < k; l++) {
|
350
|
+
labels[i * k + nres] = csi.ids_per_dis[b * k + l];
|
351
|
+
distances[i * k + nres] = b;
|
352
|
+
nres++;
|
353
|
+
}
|
354
|
+
}
|
355
|
+
while (nres < k) {
|
356
|
+
labels[i * k + nres] = -1;
|
357
|
+
distances[i * k + nres] = std::numeric_limits<int32_t>::max();
|
358
|
+
++nres;
|
359
|
+
}
|
360
|
+
}
|
361
|
+
}
|
362
|
+
|
363
|
+
|
364
|
+
|
365
|
+
// works faster than the template version
|
366
|
+
static
|
367
|
+
void hammings_knn_hc_1 (
|
368
|
+
int_maxheap_array_t * ha,
|
369
|
+
const uint64_t * bs1,
|
370
|
+
const uint64_t * bs2,
|
371
|
+
size_t n2,
|
372
|
+
bool order = true,
|
373
|
+
bool init_heap = true)
|
374
|
+
{
|
375
|
+
const size_t nwords = 1;
|
376
|
+
size_t k = ha->k;
|
377
|
+
|
378
|
+
|
379
|
+
if (init_heap) {
|
380
|
+
ha->heapify ();
|
381
|
+
}
|
382
|
+
|
383
|
+
#pragma omp parallel for
|
384
|
+
for (size_t i = 0; i < ha->nh; i++) {
|
385
|
+
const uint64_t bs1_ = bs1 [i];
|
386
|
+
const uint64_t * bs2_ = bs2;
|
387
|
+
hamdis_t dis;
|
388
|
+
hamdis_t * bh_val_ = ha->val + i * k;
|
389
|
+
hamdis_t bh_val_0 = bh_val_[0];
|
390
|
+
int64_t * bh_ids_ = ha->ids + i * k;
|
391
|
+
size_t j;
|
392
|
+
for (j = 0; j < n2; j++, bs2_+= nwords) {
|
393
|
+
dis = popcount64 (bs1_ ^ *bs2_);
|
394
|
+
if (dis < bh_val_0) {
|
395
|
+
faiss::maxheap_pop<hamdis_t> (k, bh_val_, bh_ids_);
|
396
|
+
faiss::maxheap_push<hamdis_t> (k, bh_val_, bh_ids_, dis, j);
|
397
|
+
bh_val_0 = bh_val_[0];
|
398
|
+
}
|
399
|
+
}
|
400
|
+
}
|
401
|
+
if (order) {
|
402
|
+
ha->reorder ();
|
403
|
+
}
|
404
|
+
}
|
405
|
+
|
406
|
+
|
407
|
+
|
408
|
+
|
409
|
+
/* Functions to maps vectors to bits. Assume proper allocation done beforehand,
|
410
|
+
meaning that b should be be able to receive as many bits as x may produce. */
|
411
|
+
|
412
|
+
/*
|
413
|
+
* dimension 0 corresponds to the least significant bit of b[0], or
|
414
|
+
* equivalently to the lsb of the first byte that is stored.
|
415
|
+
*/
|
416
|
+
void fvec2bitvec (const float * x, uint8_t * b, size_t d)
|
417
|
+
{
|
418
|
+
for (int i = 0; i < d; i += 8) {
|
419
|
+
uint8_t w = 0;
|
420
|
+
uint8_t mask = 1;
|
421
|
+
int nj = i + 8 <= d ? 8 : d - i;
|
422
|
+
for (int j = 0; j < nj; j++) {
|
423
|
+
if (x[i + j] >= 0)
|
424
|
+
w |= mask;
|
425
|
+
mask <<= 1;
|
426
|
+
}
|
427
|
+
*b = w;
|
428
|
+
b++;
|
429
|
+
}
|
430
|
+
}
|
431
|
+
|
432
|
+
|
433
|
+
|
434
|
+
/* Same but for n vectors.
|
435
|
+
Ensure that the ouptut b is byte-aligned (pad with 0s). */
|
436
|
+
void fvecs2bitvecs (const float * x, uint8_t * b, size_t d, size_t n)
|
437
|
+
{
|
438
|
+
const int64_t ncodes = ((d + 7) / 8);
|
439
|
+
#pragma omp parallel for if(n > 100000)
|
440
|
+
for (size_t i = 0; i < n; i++)
|
441
|
+
fvec2bitvec (x + i * d, b + i * ncodes, d);
|
442
|
+
}
|
443
|
+
|
444
|
+
|
445
|
+
|
446
|
+
void bitvecs2fvecs (
|
447
|
+
const uint8_t * b,
|
448
|
+
float * x,
|
449
|
+
size_t d,
|
450
|
+
size_t n) {
|
451
|
+
|
452
|
+
const int64_t ncodes = ((d + 7) / 8);
|
453
|
+
#pragma omp parallel for if(n > 100000)
|
454
|
+
for (size_t i = 0; i < n; i++) {
|
455
|
+
binary_to_real (d, b + i * ncodes, x + i * d);
|
456
|
+
}
|
457
|
+
}
|
458
|
+
|
459
|
+
|
460
|
+
/* Reverse bit (NOT a optimized function, only used for print purpose) */
|
461
|
+
static uint64_t uint64_reverse_bits (uint64_t b)
|
462
|
+
{
|
463
|
+
int i;
|
464
|
+
uint64_t revb = 0;
|
465
|
+
for (i = 0; i < 64; i++) {
|
466
|
+
revb <<= 1;
|
467
|
+
revb |= b & 1;
|
468
|
+
b >>= 1;
|
469
|
+
}
|
470
|
+
return revb;
|
471
|
+
}
|
472
|
+
|
473
|
+
|
474
|
+
/* print the bit vector */
|
475
|
+
void bitvec_print (const uint8_t * b, size_t d)
|
476
|
+
{
|
477
|
+
size_t i, j;
|
478
|
+
for (i = 0; i < d; ) {
|
479
|
+
uint64_t brev = uint64_reverse_bits (* (uint64_t *) b);
|
480
|
+
for (j = 0; j < 64 && i < d; j++, i++) {
|
481
|
+
printf ("%d", (int) (brev & 1));
|
482
|
+
brev >>= 1;
|
483
|
+
}
|
484
|
+
b += 8;
|
485
|
+
printf (" ");
|
486
|
+
}
|
487
|
+
}
|
488
|
+
|
489
|
+
|
490
|
+
|
491
|
+
|
492
|
+
|
493
|
+
/*----------------------------------------*/
|
494
|
+
/* Hamming distance computation and k-nn */
|
495
|
+
|
496
|
+
|
497
|
+
#define C64(x) ((uint64_t *)x)
|
498
|
+
|
499
|
+
|
500
|
+
/* Compute a set of Hamming distances */
|
501
|
+
void hammings (
|
502
|
+
const uint8_t * a,
|
503
|
+
const uint8_t * b,
|
504
|
+
size_t na, size_t nb,
|
505
|
+
size_t ncodes,
|
506
|
+
hamdis_t * __restrict dis)
|
507
|
+
{
|
508
|
+
FAISS_THROW_IF_NOT (ncodes % 8 == 0);
|
509
|
+
switch (ncodes) {
|
510
|
+
case 8:
|
511
|
+
faiss::hammings <64> (C64(a), C64(b), na, nb, dis); return;
|
512
|
+
case 16:
|
513
|
+
faiss::hammings <128> (C64(a), C64(b), na, nb, dis); return;
|
514
|
+
case 32:
|
515
|
+
faiss::hammings <256> (C64(a), C64(b), na, nb, dis); return;
|
516
|
+
case 64:
|
517
|
+
faiss::hammings <512> (C64(a), C64(b), na, nb, dis); return;
|
518
|
+
default:
|
519
|
+
faiss::hammings (C64(a), C64(b), na, nb, ncodes * 8, dis); return;
|
520
|
+
}
|
521
|
+
}
|
522
|
+
|
523
|
+
void hammings_knn(
|
524
|
+
int_maxheap_array_t *ha,
|
525
|
+
const uint8_t *a,
|
526
|
+
const uint8_t *b,
|
527
|
+
size_t nb,
|
528
|
+
size_t ncodes,
|
529
|
+
int order)
|
530
|
+
{
|
531
|
+
hammings_knn_hc(ha, a, b, nb, ncodes, order);
|
532
|
+
}
|
533
|
+
void hammings_knn_hc (
|
534
|
+
int_maxheap_array_t * ha,
|
535
|
+
const uint8_t * a,
|
536
|
+
const uint8_t * b,
|
537
|
+
size_t nb,
|
538
|
+
size_t ncodes,
|
539
|
+
int order)
|
540
|
+
{
|
541
|
+
switch (ncodes) {
|
542
|
+
case 4:
|
543
|
+
hammings_knn_hc<faiss::HammingComputer4>
|
544
|
+
(4, ha, a, b, nb, order, true);
|
545
|
+
break;
|
546
|
+
case 8:
|
547
|
+
hammings_knn_hc_1 (ha, C64(a), C64(b), nb, order, true);
|
548
|
+
// hammings_knn_hc<faiss::HammingComputer8>
|
549
|
+
// (8, ha, a, b, nb, order, true);
|
550
|
+
break;
|
551
|
+
case 16:
|
552
|
+
hammings_knn_hc<faiss::HammingComputer16>
|
553
|
+
(16, ha, a, b, nb, order, true);
|
554
|
+
break;
|
555
|
+
case 32:
|
556
|
+
hammings_knn_hc<faiss::HammingComputer32>
|
557
|
+
(32, ha, a, b, nb, order, true);
|
558
|
+
break;
|
559
|
+
default:
|
560
|
+
if(ncodes % 8 == 0) {
|
561
|
+
hammings_knn_hc<faiss::HammingComputerM8>
|
562
|
+
(ncodes, ha, a, b, nb, order, true);
|
563
|
+
} else {
|
564
|
+
hammings_knn_hc<faiss::HammingComputerDefault>
|
565
|
+
(ncodes, ha, a, b, nb, order, true);
|
566
|
+
|
567
|
+
}
|
568
|
+
}
|
569
|
+
}
|
570
|
+
|
571
|
+
void hammings_knn_mc(
|
572
|
+
const uint8_t * a,
|
573
|
+
const uint8_t * b,
|
574
|
+
size_t na,
|
575
|
+
size_t nb,
|
576
|
+
size_t k,
|
577
|
+
size_t ncodes,
|
578
|
+
int32_t *distances,
|
579
|
+
int64_t *labels)
|
580
|
+
{
|
581
|
+
switch (ncodes) {
|
582
|
+
case 4:
|
583
|
+
hammings_knn_mc<faiss::HammingComputer4>(
|
584
|
+
4, a, b, na, nb, k, distances, labels
|
585
|
+
);
|
586
|
+
break;
|
587
|
+
case 8:
|
588
|
+
// TODO(hoss): Write analog to hammings_knn_hc_1
|
589
|
+
// hammings_knn_hc_1 (ha, C64(a), C64(b), nb, order, true);
|
590
|
+
hammings_knn_mc<faiss::HammingComputer8>(
|
591
|
+
8, a, b, na, nb, k, distances, labels
|
592
|
+
);
|
593
|
+
break;
|
594
|
+
case 16:
|
595
|
+
hammings_knn_mc<faiss::HammingComputer16>(
|
596
|
+
16, a, b, na, nb, k, distances, labels
|
597
|
+
);
|
598
|
+
break;
|
599
|
+
case 32:
|
600
|
+
hammings_knn_mc<faiss::HammingComputer32>(
|
601
|
+
32, a, b, na, nb, k, distances, labels
|
602
|
+
);
|
603
|
+
break;
|
604
|
+
default:
|
605
|
+
if(ncodes % 8 == 0) {
|
606
|
+
hammings_knn_mc<faiss::HammingComputerM8>(
|
607
|
+
ncodes, a, b, na, nb, k, distances, labels
|
608
|
+
);
|
609
|
+
} else {
|
610
|
+
hammings_knn_mc<faiss::HammingComputerDefault>(
|
611
|
+
ncodes, a, b, na, nb, k, distances, labels
|
612
|
+
);
|
613
|
+
}
|
614
|
+
}
|
615
|
+
}
|
616
|
+
|
617
|
+
|
618
|
+
|
619
|
+
|
620
|
+
/* Count number of matches given a max threshold */
|
621
|
+
void hamming_count_thres (
|
622
|
+
const uint8_t * bs1,
|
623
|
+
const uint8_t * bs2,
|
624
|
+
size_t n1,
|
625
|
+
size_t n2,
|
626
|
+
hamdis_t ht,
|
627
|
+
size_t ncodes,
|
628
|
+
size_t * nptr)
|
629
|
+
{
|
630
|
+
switch (ncodes) {
|
631
|
+
case 8:
|
632
|
+
faiss::hamming_count_thres <64> (C64(bs1), C64(bs2),
|
633
|
+
n1, n2, ht, nptr);
|
634
|
+
return;
|
635
|
+
case 16:
|
636
|
+
faiss::hamming_count_thres <128> (C64(bs1), C64(bs2),
|
637
|
+
n1, n2, ht, nptr);
|
638
|
+
return;
|
639
|
+
case 32:
|
640
|
+
faiss::hamming_count_thres <256> (C64(bs1), C64(bs2),
|
641
|
+
n1, n2, ht, nptr);
|
642
|
+
return;
|
643
|
+
case 64:
|
644
|
+
faiss::hamming_count_thres <512> (C64(bs1), C64(bs2),
|
645
|
+
n1, n2, ht, nptr);
|
646
|
+
return;
|
647
|
+
default:
|
648
|
+
FAISS_THROW_FMT ("not implemented for %zu bits", ncodes);
|
649
|
+
}
|
650
|
+
}
|
651
|
+
|
652
|
+
|
653
|
+
/* Count number of cross-matches given a threshold */
|
654
|
+
void crosshamming_count_thres (
|
655
|
+
const uint8_t * dbs,
|
656
|
+
size_t n,
|
657
|
+
hamdis_t ht,
|
658
|
+
size_t ncodes,
|
659
|
+
size_t * nptr)
|
660
|
+
{
|
661
|
+
switch (ncodes) {
|
662
|
+
case 8:
|
663
|
+
faiss::crosshamming_count_thres <64> (C64(dbs), n, ht, nptr);
|
664
|
+
return;
|
665
|
+
case 16:
|
666
|
+
faiss::crosshamming_count_thres <128> (C64(dbs), n, ht, nptr);
|
667
|
+
return;
|
668
|
+
case 32:
|
669
|
+
faiss::crosshamming_count_thres <256> (C64(dbs), n, ht, nptr);
|
670
|
+
return;
|
671
|
+
case 64:
|
672
|
+
faiss::crosshamming_count_thres <512> (C64(dbs), n, ht, nptr);
|
673
|
+
return;
|
674
|
+
default:
|
675
|
+
FAISS_THROW_FMT ("not implemented for %zu bits", ncodes);
|
676
|
+
}
|
677
|
+
}
|
678
|
+
|
679
|
+
|
680
|
+
/* Returns all matches given a threshold */
|
681
|
+
size_t match_hamming_thres (
|
682
|
+
const uint8_t * bs1,
|
683
|
+
const uint8_t * bs2,
|
684
|
+
size_t n1,
|
685
|
+
size_t n2,
|
686
|
+
hamdis_t ht,
|
687
|
+
size_t ncodes,
|
688
|
+
int64_t * idx,
|
689
|
+
hamdis_t * dis)
|
690
|
+
{
|
691
|
+
switch (ncodes) {
|
692
|
+
case 8:
|
693
|
+
return faiss::match_hamming_thres <64> (C64(bs1), C64(bs2),
|
694
|
+
n1, n2, ht, idx, dis);
|
695
|
+
case 16:
|
696
|
+
return faiss::match_hamming_thres <128> (C64(bs1), C64(bs2),
|
697
|
+
n1, n2, ht, idx, dis);
|
698
|
+
case 32:
|
699
|
+
return faiss::match_hamming_thres <256> (C64(bs1), C64(bs2),
|
700
|
+
n1, n2, ht, idx, dis);
|
701
|
+
case 64:
|
702
|
+
return faiss::match_hamming_thres <512> (C64(bs1), C64(bs2),
|
703
|
+
n1, n2, ht, idx, dis);
|
704
|
+
default:
|
705
|
+
FAISS_THROW_FMT ("not implemented for %zu bits", ncodes);
|
706
|
+
return 0;
|
707
|
+
}
|
708
|
+
}
|
709
|
+
|
710
|
+
|
711
|
+
#undef C64
|
712
|
+
|
713
|
+
|
714
|
+
|
715
|
+
/*************************************
|
716
|
+
* generalized Hamming distances
|
717
|
+
************************************/
|
718
|
+
|
719
|
+
|
720
|
+
|
721
|
+
template <class HammingComputer>
|
722
|
+
static void hamming_dis_inner_loop (
|
723
|
+
const uint8_t *ca,
|
724
|
+
const uint8_t *cb,
|
725
|
+
size_t nb,
|
726
|
+
size_t code_size,
|
727
|
+
int k,
|
728
|
+
hamdis_t * bh_val_,
|
729
|
+
int64_t * bh_ids_)
|
730
|
+
{
|
731
|
+
|
732
|
+
HammingComputer hc (ca, code_size);
|
733
|
+
|
734
|
+
for (size_t j = 0; j < nb; j++) {
|
735
|
+
int ndiff = hc.hamming (cb);
|
736
|
+
cb += code_size;
|
737
|
+
if (ndiff < bh_val_[0]) {
|
738
|
+
maxheap_pop<hamdis_t> (k, bh_val_, bh_ids_);
|
739
|
+
maxheap_push<hamdis_t> (k, bh_val_, bh_ids_, ndiff, j);
|
740
|
+
}
|
741
|
+
}
|
742
|
+
}
|
743
|
+
|
744
|
+
void generalized_hammings_knn_hc (
|
745
|
+
int_maxheap_array_t * ha,
|
746
|
+
const uint8_t * a,
|
747
|
+
const uint8_t * b,
|
748
|
+
size_t nb,
|
749
|
+
size_t code_size,
|
750
|
+
int ordered)
|
751
|
+
{
|
752
|
+
int na = ha->nh;
|
753
|
+
int k = ha->k;
|
754
|
+
|
755
|
+
if (ordered)
|
756
|
+
ha->heapify ();
|
757
|
+
|
758
|
+
#pragma omp parallel for
|
759
|
+
for (int i = 0; i < na; i++) {
|
760
|
+
const uint8_t *ca = a + i * code_size;
|
761
|
+
const uint8_t *cb = b;
|
762
|
+
|
763
|
+
hamdis_t * bh_val_ = ha->val + i * k;
|
764
|
+
int64_t * bh_ids_ = ha->ids + i * k;
|
765
|
+
|
766
|
+
switch (code_size) {
|
767
|
+
case 8:
|
768
|
+
hamming_dis_inner_loop<GenHammingComputer8>
|
769
|
+
(ca, cb, nb, 8, k, bh_val_, bh_ids_);
|
770
|
+
break;
|
771
|
+
case 16:
|
772
|
+
hamming_dis_inner_loop<GenHammingComputer16>
|
773
|
+
(ca, cb, nb, 16, k, bh_val_, bh_ids_);
|
774
|
+
break;
|
775
|
+
case 32:
|
776
|
+
hamming_dis_inner_loop<GenHammingComputer32>
|
777
|
+
(ca, cb, nb, 32, k, bh_val_, bh_ids_);
|
778
|
+
break;
|
779
|
+
default:
|
780
|
+
hamming_dis_inner_loop<GenHammingComputerM8>
|
781
|
+
(ca, cb, nb, code_size, k, bh_val_, bh_ids_);
|
782
|
+
break;
|
783
|
+
}
|
784
|
+
}
|
785
|
+
|
786
|
+
if (ordered)
|
787
|
+
ha->reorder ();
|
788
|
+
|
789
|
+
}
|
790
|
+
|
791
|
+
|
792
|
+
} // namespace faiss
|