de.oddb 2.0.0
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- data/Guide.txt +3 -0
- data/History.txt +5 -0
- data/LICENCE.txt +339 -0
- data/Manifest.txt +430 -0
- data/README +423 -0
- data/README.txt +25 -0
- data/Rakefile +28 -0
- data/bin/admin +71 -0
- data/bin/exportd +44 -0
- data/bin/oddbd +33 -0
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- data/data/fulltext/data/german_compound/README +15 -0
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- data/data/fulltext/data/ispell-german-compound.tar.gz +0 -0
- data/data/fulltext/redist/dict_french/Makefile +12 -0
- data/data/fulltext/redist/dict_french/README.french +1 -0
- data/data/fulltext/redist/dict_french/dict_french.sql.in +7 -0
- data/data/fulltext/redist/dict_french/dict_snowball.c +56 -0
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- data/data/fulltext/redist/dict_french/subinclude.h +2 -0
- data/data/fulltext/redist/dict_german/Makefile +12 -0
- data/data/fulltext/redist/dict_german/README.german +1 -0
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- data/data/fulltext/redist/dict_german/dict_snowball.c +56 -0
- data/data/fulltext/redist/dict_german/german_stem.c +527 -0
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- data/data/fulltext/redist/german_stem.c +527 -0
- data/data/fulltext/redist/german_stem.h +16 -0
- data/jobs/export_chde_xls +20 -0
- data/jobs/export_csv +20 -0
- data/jobs/export_fachinfo_yaml +20 -0
- data/jobs/export_patinfo_yaml +20 -0
- data/jobs/export_yaml +20 -0
- data/jobs/import_dimdi +15 -0
- data/jobs/import_gkv +19 -0
- data/jobs/import_pharma24 +15 -0
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- data/jobs/import_whocc +18 -0
- data/lib/fixes/singular.rb +9 -0
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- data/lib/oddb.rb +13 -0
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- data/lib/oddb/config.rb +112 -0
- data/lib/oddb/currency.rb +6 -0
- data/lib/oddb/drugs.rb +16 -0
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- data/lib/oddb/html/state/drugs/ajax/remote_infos.rb +19 -0
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- data/lib/oddb/html/util/unsaved_helper.rb +20 -0
- data/lib/oddb/html/util/validator.rb +59 -0
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- data/lib/oddb/html/view/drugs/ajax/remote_infos.rb +44 -0
- data/lib/oddb/html/view/drugs/atc_browser.rb +68 -0
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- data/lib/oddb/html/view/foot.rb +52 -0
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- data/lib/oddb/html/view/register_poweruser.rb +29 -0
- data/lib/oddb/html/view/rss/feedback.rb +64 -0
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- data/lib/oddb/html/view/search.rb +104 -0
- data/lib/oddb/html/view/snapback.rb +24 -0
- data/lib/oddb/html/view/template.rb +56 -0
- data/lib/oddb/import/dimdi.rb +583 -0
- data/lib/oddb/import/excel.rb +45 -0
- data/lib/oddb/import/gkv.rb +463 -0
- data/lib/oddb/import/importer.rb +36 -0
- data/lib/oddb/import/pharma24.rb +211 -0
- data/lib/oddb/import/pharmnet.rb +1186 -0
- data/lib/oddb/import/rtf.rb +409 -0
- data/lib/oddb/import/whocc.rb +148 -0
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- data/lib/oddb/model.rb +179 -0
- data/lib/oddb/persistence.rb +22 -0
- data/lib/oddb/persistence/odba.rb +32 -0
- data/lib/oddb/persistence/odba/business/company.rb +13 -0
- data/lib/oddb/persistence/odba/business/grant_download.rb +14 -0
- data/lib/oddb/persistence/odba/business/invoice.rb +15 -0
- data/lib/oddb/persistence/odba/drugs/atc.rb +15 -0
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- data/lib/oddb/persistence/odba/model.rb +68 -0
- data/lib/oddb/persistence/odba/text/document.rb +11 -0
- data/lib/oddb/persistence/odba/util/code.rb +11 -0
- data/lib/oddb/persistence/odba/util/m10l_document.rb +13 -0
- data/lib/oddb/persistence/og.rb +16 -0
- data/lib/oddb/persistence/og/drugs/composition.rb +14 -0
- data/lib/oddb/persistence/og/drugs/product.rb +14 -0
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- data/lib/oddb/persistence/og/util/multilingual.rb +13 -0
- data/lib/oddb/redist/rtf_tools/reader.rb +139 -0
- data/lib/oddb/remote/business/company.rb +17 -0
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- data/lib/oddb/remote/drugs/atc.rb +31 -0
- data/lib/oddb/remote/drugs/dose.rb +8 -0
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- data/lib/oddb/util/smtp_tls.rb +58 -0
- data/lib/oddb/util/updater.rb +161 -0
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- data/test/business/test_company.rb +29 -0
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- data/test/drugs/test_atc.rb +54 -0
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- data/test/import/data/html/pharma24/ac-page-8.html +2999 -0
- data/test/import/data/html/pharma24/ac-page-9.html +2999 -0
- data/test/import/data/html/pharma24/ac.html +2999 -0
- data/test/import/data/html/pharmnet/display.html +662 -0
- data/test/import/data/html/pharmnet/display1.html +625 -0
- data/test/import/data/html/pharmnet/display2.html +625 -0
- data/test/import/data/html/pharmnet/display3.html +625 -0
- data/test/import/data/html/pharmnet/display_tramal.html +634 -0
- data/test/import/data/html/pharmnet/empty_result.html +395 -0
- data/test/import/data/html/pharmnet/gate.html +246 -0
- data/test/import/data/html/pharmnet/index.html +258 -0
- data/test/import/data/html/pharmnet/paged_result_1.html +401 -0
- data/test/import/data/html/pharmnet/paged_result_2.html +401 -0
- data/test/import/data/html/pharmnet/result.html +401 -0
- data/test/import/data/html/pharmnet/search.html +865 -0
- data/test/import/data/html/pharmnet/search_filtered.html +182 -0
- data/test/import/data/html/whocc/A.html +56 -0
- data/test/import/data/html/whocc/A03.html +48 -0
- data/test/import/data/html/whocc/A03AB.html +48 -0
- data/test/import/data/html/whocc/A06AA.html +47 -0
- data/test/import/data/html/whocc/C03.html +47 -0
- data/test/import/data/html/whocc/login.html +77 -0
- data/test/import/data/mail/csv.mail +81 -0
- data/test/import/data/rtf/pharmnet/aarane.pi.rtf +648 -0
- data/test/import/data/rtf/pharmnet/ace_hemmer_ratio.pi.rtf +324 -0
- data/test/import/data/rtf/pharmnet/ace_hemmer_ratio.rtf +4816 -0
- data/test/import/data/rtf/pharmnet/acemetacin.pi.rtf +388 -0
- data/test/import/data/rtf/pharmnet/acemit.pi.rtf +240 -0
- data/test/import/data/rtf/pharmnet/acerbon.pi.rtf +1257 -0
- data/test/import/data/rtf/pharmnet/acetylcystein.pi.rtf +323 -0
- data/test/import/data/rtf/pharmnet/aciclo.pi.rtf +287 -0
- data/test/import/data/rtf/pharmnet/aciclovir.pi.rtf +236 -0
- data/test/import/data/rtf/pharmnet/actrapid.pi.rtf +322 -0
- data/test/import/data/rtf/pharmnet/amlodipin.pi.rtf +452 -0
- data/test/import/data/rtf/pharmnet/amlodipin.rtf +473 -0
- data/test/import/data/rtf/pharmnet/aspirin.pi.rtf +313 -0
- data/test/import/data/rtf/pharmnet/aspirin.rtf +781 -0
- data/test/import/data/rtf/pharmnet/baymycard.pi.rtf +447 -0
- data/test/import/data/rtf/pharmnet/omeprazol.pi.rtf +510 -0
- data/test/import/data/rtf/pharmnet/omeprazol.rtf +9216 -0
- data/test/import/data/rtf/pharmnet/paroxetin.pi.rtf +678 -0
- data/test/import/data/rtf/pharmnet/selegilin.pi.rtf +312 -0
- data/test/import/data/rtf/pharmnet/selegilin.rtf +683 -0
- data/test/import/data/rtf/pharmnet/valium.pi.rtf +387 -0
- data/test/import/data/txt/gkv/gkv_p1.txt +17 -0
- data/test/import/data/xls/darform_010706.xls +0 -0
- data/test/import/data/xls/fb010706.xls +0 -0
- data/test/import/data/xls/liste_zuzahlungsbefreite_arzneimittel_suchfunktion.xls +0 -0
- data/test/import/data/xls/wirkkurz_010406.xls +0 -0
- data/test/import/data/xml/ATC_2006.xml +47 -0
- data/test/import/data/xml/ATC_2006_ddd.xml +35 -0
- data/test/import/test_dimdi.rb +323 -0
- data/test/import/test_excel.rb +31 -0
- data/test/import/test_gkv.rb +260 -0
- data/test/import/test_pharma24.rb +112 -0
- data/test/import/test_pharmnet.rb +980 -0
- data/test/import/test_rtf.rb +37 -0
- data/test/import/test_whocc.rb +314 -0
- data/test/remote/drugs/test_active_agent.rb +36 -0
- data/test/selenium/selenium-server.jar +0 -0
- data/test/selenium/test_atc_browser.rb +121 -0
- data/test/selenium/test_atc_guidelines.rb +95 -0
- data/test/selenium/test_collect.rb +137 -0
- data/test/selenium/test_compare.rb +294 -0
- data/test/selenium/test_fachinfo.rb +128 -0
- data/test/selenium/test_feedback.rb +192 -0
- data/test/selenium/test_init.rb +64 -0
- data/test/selenium/test_limit.rb +304 -0
- data/test/selenium/test_login.rb +67 -0
- data/test/selenium/test_package.rb +516 -0
- data/test/selenium/test_patinfo.rb +128 -0
- data/test/selenium/test_product.rb +80 -0
- data/test/selenium/test_products.rb +141 -0
- data/test/selenium/test_search.rb +933 -0
- data/test/selenium/test_sequence.rb +513 -0
- data/test/selenium/unit.rb +190 -0
- data/test/stub/http_server.rb +144 -0
- data/test/stub/model.rb +173 -0
- data/test/suite.rb +15 -0
- data/test/test_model.rb +83 -0
- data/test/util/test_code.rb +74 -0
- data/test/util/test_ipn.rb +117 -0
- data/test/util/test_mail.rb +85 -0
- data/test/util/test_multilingual.rb +97 -0
- data/test/util/test_server.rb +94 -0
- data/test/util/test_updater.rb +130 -0
- data/test/util/test_ydim.rb +115 -0
- data/test/util/test_yus.rb +79 -0
- metadata +568 -0
@@ -0,0 +1,35 @@
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<xml xmlns:s='uuid:BDC6E3F0-6DA3-11d1-A2A3-00AA00C14882'
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xmlns:dt='uuid:C2F41010-65B3-11d1-A29F-00AA00C14882'
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xmlns:rs='urn:schemas-microsoft-com:rowset'
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xmlns:z='#RowsetSchema'>
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<s:Schema id='RowsetSchema'>
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<s:ElementType name='row' content='eltOnly' rs:updatable='true'>
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<s:AttributeType name='ATCCode' rs:number='1' rs:nullable='true' rs:writeunknown='true' rs:basecatalog='ATC'
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rs:basetable='#t1' rs:basecolumn='ATCCode'>
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<s:datatype dt:type='string' rs:dbtype='str' dt:maxLength='10'/>
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</s:AttributeType>
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<s:AttributeType name='DDD' rs:number='2' rs:nullable='true' rs:writeunknown='true' rs:basecatalog='ATC' rs:basetable='#t1'
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rs:basecolumn='DDD'>
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<s:datatype dt:type='string' rs:dbtype='str' dt:maxLength='20'/>
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</s:AttributeType>
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<s:AttributeType name='UnitType' rs:number='3' rs:nullable='true' rs:writeunknown='true' rs:basecatalog='ATC'
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rs:basetable='#t1' rs:basecolumn='UnitType'>
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<s:datatype dt:type='string' rs:dbtype='str' dt:maxLength='255'/>
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</s:AttributeType>
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<s:AttributeType name='AdmCode' rs:number='4' rs:nullable='true' rs:writeunknown='true' rs:basecatalog='ATC'
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rs:basetable='#t1' rs:basecolumn='AdmCode'>
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<s:datatype dt:type='string' rs:dbtype='str' dt:maxLength='255'/>
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</s:AttributeType>
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<s:AttributeType name='DDDComment' rs:number='5' rs:nullable='true' rs:writeunknown='true' rs:basecatalog='ATC'
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rs:basetable='#t1' rs:basecolumn='DDDComment'>
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<s:datatype dt:type='string' rs:dbtype='str' dt:maxLength='255'/>
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</s:AttributeType>
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<s:extends type='rs:rowbase'/>
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</s:ElementType>
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</s:Schema>
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<rs:data>
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<z:row ATCCode='A01AB02' DDD='60' UnitType='mg' AdmCode='O'/>
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<z:row ATCCode='A10BB01' DDD='7' UnitType='mg' AdmCode='O' DDDComment='mikrokristall. Substanz'/>
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<z:row ATCCode='A10BB01' DDD='10' UnitType='mg' AdmCode='O'/>
|
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</rs:data>
|
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</xml>
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@@ -0,0 +1,323 @@
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#!/usr/bin/env ruby
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# Import::TestDimdi -- de.oddb.org -- 04.09.2006 -- hwyss@ywesee.com
|
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$: << File.expand_path('..', File.dirname(__FILE__))
|
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$: << File.expand_path('../../lib', File.dirname(__FILE__))
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require 'test/unit'
|
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require 'oddb/import/dimdi'
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require 'stub/model'
|
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require 'flexmock'
|
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module ODDB
|
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module Import
|
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class TestDimdi < Test::Unit::TestCase
|
15
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include FlexMock::TestCase
|
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def setup
|
17
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@config = flexstub(ODDB.config)
|
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@var = File.expand_path('var', File.dirname(__FILE__))
|
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@data_dir = File.expand_path('data', File.dirname(__FILE__))
|
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@xls_dir = File.join(@var, 'xls')
|
21
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FileUtils.rm_r(@xls_dir) if(File.exist?(@xls_dir))
|
22
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@config.should_receive(:var).and_return(@var)
|
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end
|
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def set_time_temporarily(year, month)
|
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flexstub(Time) do |timeclass|
|
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timeclass.should_receive(:now).and_return do
|
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flexmock do |nowobj|
|
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nowobj.should_receive(:month).and_return(month)
|
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nowobj.should_receive(:year).and_return(year)
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end
|
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end
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end
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end
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def test_download_path
|
35
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set_time_temporarily(2010, 4)
|
36
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download_path = "http://www.dimdi.de/dynamic/de/amg/fbag/downloadcenter/2010/2-quartal/"
|
37
|
+
assert_equal(download_path, Dimdi.download_path)
|
38
|
+
end
|
39
|
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def test_download_path2
|
40
|
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set_time_temporarily(2009, 3)
|
41
|
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download_path = "http://www.dimdi.de/dynamic/de/amg/fbag/downloadcenter/2009/1-quartal/"
|
42
|
+
assert_equal(download_path, Dimdi.download_path)
|
43
|
+
end
|
44
|
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def test_current_date
|
45
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path = File.join(@data_dir, 'html', 'dimdi_index.html')
|
46
|
+
assert_equal(Date.new(2010,4), Dimdi.current_date(path))
|
47
|
+
end
|
48
|
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def test_download_latest__only_once
|
49
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today = Date.new(2006,10)
|
50
|
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file = "liste_zuzahlungsbefreite_arzneimittel_suchfunktion.xls"
|
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path = File.join(@xls_dir, file)
|
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arch = File.join(@xls_dir, sprintf("2006.10.01-%s", file))
|
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zuzahlung = "http://www.die-gesundheitsreform.de/presse/pressethemen/avwg/pdf/liste_zuzahlungsbefreite_arzneimittel_suchfunktion.xls"
|
54
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zuzahlung_uri = flexmock('Zuzahlungsbefreiung-URI')
|
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zuzahlung_uri.should_receive(:open)\
|
56
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.times(2).and_return {
|
57
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StringIO.new("download_latest-io-read")
|
58
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}
|
59
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uriparse = flexstub(URI)
|
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uriparse.should_receive(:parse).with(zuzahlung)\
|
61
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.times(2).and_return(zuzahlung_uri)
|
62
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Dimdi.download_latest(zuzahlung, today) { |fh|
|
63
|
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assert_equal('download_latest-io-read', fh.read)
|
64
|
+
}
|
65
|
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assert(File.exist?(path))
|
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assert(File.exist?(arch))
|
67
|
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Dimdi.download_latest(zuzahlung, today) { |fh|
|
68
|
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flunk("should not be called again")
|
69
|
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}
|
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|
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end
|
71
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end
|
72
|
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module Dimdi
|
73
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class TestGalenicForm < Test::Unit::TestCase
|
74
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def setup
|
75
|
+
Drugs::GalenicForm.instances.clear
|
76
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Drugs::GalenicGroup.instances.clear
|
77
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@data_dir = File.expand_path('data', File.dirname(__FILE__))
|
78
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@path = File.expand_path('xls/darform_010706.xls', @data_dir)
|
79
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@import = GalenicForm.new
|
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end
|
81
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def setup_form(name)
|
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form = Drugs::GalenicForm.new
|
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form.description.de = name
|
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form.save
|
85
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+
form
|
86
|
+
end
|
87
|
+
def test_import
|
88
|
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input = open(@path)
|
89
|
+
assert_equal([], Drugs::GalenicForm.instances)
|
90
|
+
@import.import(input)
|
91
|
+
assert_equal(3, Drugs::GalenicForm.instances.size)
|
92
|
+
expected = [u("Aerolizer"), u("Ampullen"), u("Depotampullen")]
|
93
|
+
names = Drugs::GalenicForm.instances.collect { |inst|
|
94
|
+
inst.description.de
|
95
|
+
}
|
96
|
+
assert_equal(expected, names)
|
97
|
+
|
98
|
+
# do it again, nothing should change
|
99
|
+
input = open(@path)
|
100
|
+
@import.import(input)
|
101
|
+
assert_equal(3, Drugs::GalenicForm.instances.size)
|
102
|
+
names = Drugs::GalenicForm.instances.collect { |inst|
|
103
|
+
inst.description.de
|
104
|
+
}
|
105
|
+
assert_equal(expected, names)
|
106
|
+
galenic_form = Drugs::GalenicForm.instances.last
|
107
|
+
assert_instance_of(Drugs::GalenicForm, galenic_form)
|
108
|
+
assert_equal(2, galenic_form.codes.size)
|
109
|
+
code = galenic_form.codes.first
|
110
|
+
assert_instance_of(Util::Code, code)
|
111
|
+
assert_equal('DE', code.country)
|
112
|
+
assert_equal("galenic_form", code.type)
|
113
|
+
assert_equal('AMPD', code.value)
|
114
|
+
code = galenic_form.codes.last
|
115
|
+
assert_instance_of(Util::Code, code)
|
116
|
+
assert_equal('DE', code.country)
|
117
|
+
assert_equal("galenic_form", code.type)
|
118
|
+
assert_equal('AMPD1', code.value)
|
119
|
+
end
|
120
|
+
def test_postprocess
|
121
|
+
form1 = setup_form('Tabletten')
|
122
|
+
form2 = setup_form('Filmtabletten')
|
123
|
+
form3 = setup_form('Retardtabletten')
|
124
|
+
form4 = setup_form('Retardkapseln')
|
125
|
+
@import.postprocess
|
126
|
+
group1 = Drugs::GalenicGroup.find_by_name('Tabletten')
|
127
|
+
assert_equal(group1, form1.group)
|
128
|
+
assert_equal(group1, form2.group)
|
129
|
+
group2 = Drugs::GalenicGroup.find_by_name('Retard-Tabletten')
|
130
|
+
assert_equal(group2, form3.group)
|
131
|
+
assert_equal(group2, form4.group)
|
132
|
+
end
|
133
|
+
end
|
134
|
+
class TestProduct < Test::Unit::TestCase
|
135
|
+
def setup
|
136
|
+
Drugs::Product.instances.clear
|
137
|
+
@data_dir = File.expand_path('data', File.dirname(__FILE__))
|
138
|
+
@path = File.expand_path('xls/fb010708.xls', @data_dir)
|
139
|
+
@import = Product.new
|
140
|
+
end
|
141
|
+
def test_import_base_data
|
142
|
+
tabl = Drugs::GalenicForm.new
|
143
|
+
tabl.description.de = 'Kapseln'
|
144
|
+
tabl.add_code(Util::Code.new(:galenic_form, 'KAPS', 'DE'))
|
145
|
+
tabl.save
|
146
|
+
atc = Drugs::Atc.new('M04AA51')
|
147
|
+
atc.name.de = 'Amoxicillin, Fuzzy match'
|
148
|
+
atc.save
|
149
|
+
assert_equal([], Drugs::Product.instances)
|
150
|
+
sub1 = Drugs::Substance.new
|
151
|
+
sub1.add_code(Util::Code.new("substance", u("POXM"), 'DE'))
|
152
|
+
sub1.save
|
153
|
+
tab = Drugs::GalenicForm.new
|
154
|
+
code = Util::Code.new("galenic_form", "TABS", "DE")
|
155
|
+
tab.add_code(code)
|
156
|
+
tab.description.de = "Tabletten"
|
157
|
+
tab.save
|
158
|
+
input = open(@path)
|
159
|
+
report = @import.import(input)
|
160
|
+
assert_instance_of(Array, report)
|
161
|
+
names = Drugs::Product.instances.collect { |inst|
|
162
|
+
inst.name.de
|
163
|
+
}
|
164
|
+
assert_equal(14, Drugs::Product.instances.size, names.inspect)
|
165
|
+
expected = [ "Piroxicam Ratioph Tabs", "Amoxicillin Rat Mg Fta",
|
166
|
+
"Buscopan", "Aquaphoril Aca", "To Be Deleted", "Aspirin", "Sibelium",
|
167
|
+
"Move The Package", "Capto Dura M", "Move The Sequence", "Aknefug Mino",
|
168
|
+
"Ribofluor Mgml", "Dexa Ct Mg Tabletten", "Madopar" ]
|
169
|
+
assert_equal(expected, names)
|
170
|
+
pr = Drugs::Product.instances.first
|
171
|
+
assert_equal(1, pr.sequences.size)
|
172
|
+
seq = pr.sequences.first
|
173
|
+
assert_equal(1, seq.compositions.size)
|
174
|
+
comp = seq.compositions.first
|
175
|
+
assert_equal(1.1, comp.equivalence_factor)
|
176
|
+
assert_equal(1, comp.active_agents.size)
|
177
|
+
agent = comp.active_agents.first
|
178
|
+
assert_equal(sub1, agent.substance)
|
179
|
+
assert_equal(2, seq.packages.size)
|
180
|
+
pack = seq.packages.first
|
181
|
+
assert_equal(34.25, pack.price(:public, 'DE'))
|
182
|
+
assert_equal(34.28, pack.price(:festbetrag, 'DE'))
|
183
|
+
code = pack.code(:festbetragsstufe, 'DE')
|
184
|
+
assert_instance_of(Util::Code, code)
|
185
|
+
assert_equal(2, code.value)
|
186
|
+
code = pack.code(:festbetragsgruppe, 'DE')
|
187
|
+
assert_instance_of(Util::Code, code)
|
188
|
+
assert_equal(u('9'), code.value)
|
189
|
+
assert_equal(1, pack.parts.size)
|
190
|
+
assert_equal(100, pack.size)
|
191
|
+
part = pack.parts.first
|
192
|
+
assert_instance_of(Drugs::Unit, part.unit)
|
193
|
+
assert_equal(u('Tabletten'), part.unit.name.de)
|
194
|
+
code = pack.code(:cid, 'DE')
|
195
|
+
assert_instance_of(Util::Code, code)
|
196
|
+
assert_equal("649", code.value)
|
197
|
+
|
198
|
+
pack = seq.packages.last
|
199
|
+
code = pack.code(:cid, 'DE')
|
200
|
+
assert_instance_of(Util::Code, code)
|
201
|
+
assert_equal("114568", code.value)
|
202
|
+
|
203
|
+
pr = Drugs::Product.instances.at(1)
|
204
|
+
seq = pr.sequences.first
|
205
|
+
assert_equal(atc, seq.atc)
|
206
|
+
|
207
|
+
pr = Drugs::Product.instances.at(2)
|
208
|
+
seq = pr.sequences.first
|
209
|
+
pack = seq.packages.first
|
210
|
+
assert_equal('2A', pack.code(:festbetragsgruppe).value)
|
211
|
+
|
212
|
+
pr = Drugs::Product.instances.last
|
213
|
+
seq = pr.sequences.first
|
214
|
+
comp = seq.compositions.first
|
215
|
+
assert_equal(2, comp.active_agents.size)
|
216
|
+
assert_equal(["Levodopa", "Benserazid"],
|
217
|
+
comp.substances.collect { |sub| sub.name.de })
|
218
|
+
assert_equal([Drugs::Dose.new(0,'mg'), Drugs::Dose.new(0,'mg')],
|
219
|
+
comp.doses)
|
220
|
+
|
221
|
+
# do it again, nothing should change
|
222
|
+
input = open(@path)
|
223
|
+
report = @import.import(input)
|
224
|
+
assert_instance_of(Array, report)
|
225
|
+
assert_equal(14, Drugs::Product.instances.size)
|
226
|
+
names = Drugs::Product.instances.collect { |inst|
|
227
|
+
inst.name.de
|
228
|
+
}
|
229
|
+
assert_equal(expected, names)
|
230
|
+
pr = Drugs::Product.instances.first
|
231
|
+
assert_equal(1, pr.sequences.size)
|
232
|
+
seq = pr.sequences.first
|
233
|
+
assert_equal(1, seq.compositions.size)
|
234
|
+
comp = seq.compositions.first
|
235
|
+
assert_equal(1.1, comp.equivalence_factor)
|
236
|
+
assert_equal(1, comp.active_agents.size)
|
237
|
+
agent = comp.active_agents.first
|
238
|
+
assert_equal(sub1, agent.substance)
|
239
|
+
assert_equal(2, seq.packages.size)
|
240
|
+
pack = seq.packages.first
|
241
|
+
assert_equal(34.25, pack.price(:public, 'DE'))
|
242
|
+
assert_equal(34.28, pack.price(:festbetrag, 'DE'))
|
243
|
+
code = pack.code(:festbetragsstufe, 'DE')
|
244
|
+
assert_instance_of(Util::Code, code)
|
245
|
+
assert_equal(2, code.value)
|
246
|
+
code = pack.code(:festbetragsgruppe, 'DE')
|
247
|
+
assert_instance_of(Util::Code, code)
|
248
|
+
assert_equal(u('9'), code.value)
|
249
|
+
assert_equal(1, pack.parts.size)
|
250
|
+
assert_equal(100, pack.size)
|
251
|
+
part = pack.parts.first
|
252
|
+
assert_instance_of(Drugs::Unit, part.unit)
|
253
|
+
assert_equal(u('Tabletten'), part.unit.name.de)
|
254
|
+
code = pack.code(:cid, 'DE')
|
255
|
+
assert_instance_of(Util::Code, code)
|
256
|
+
assert_equal("649", code.value)
|
257
|
+
|
258
|
+
pack = seq.packages.last
|
259
|
+
code = pack.code(:cid, 'DE')
|
260
|
+
assert_instance_of(Util::Code, code)
|
261
|
+
assert_equal("114568", code.value)
|
262
|
+
|
263
|
+
pr = Drugs::Product.instances.at(1)
|
264
|
+
seq = pr.sequences.first
|
265
|
+
assert_equal(atc, seq.atc)
|
266
|
+
|
267
|
+
pr = Drugs::Product.instances.at(2)
|
268
|
+
seq = pr.sequences.first
|
269
|
+
pack = seq.packages.first
|
270
|
+
assert_equal('2A', pack.code(:festbetragsgruppe).value)
|
271
|
+
|
272
|
+
pr = Drugs::Product.instances.last
|
273
|
+
seq = pr.sequences.first
|
274
|
+
comp = seq.compositions.first
|
275
|
+
assert_equal(2, comp.active_agents.size)
|
276
|
+
assert_equal(["Levodopa", "Benserazid"],
|
277
|
+
comp.substances.collect { |sub| sub.name.de })
|
278
|
+
assert_equal([Drugs::Dose.new(0,'mg'), Drugs::Dose.new(0,'mg')],
|
279
|
+
comp.doses)
|
280
|
+
end
|
281
|
+
end
|
282
|
+
class TestSubstance < Test::Unit::TestCase
|
283
|
+
def setup
|
284
|
+
Drugs::Substance.instances.clear
|
285
|
+
@data_dir = File.expand_path('data', File.dirname(__FILE__))
|
286
|
+
@path = File.expand_path('xls/wirkkurz_010406.xls', @data_dir)
|
287
|
+
@import = Substance.new
|
288
|
+
end
|
289
|
+
def test_import
|
290
|
+
assert_equal([], Drugs::Substance.instances)
|
291
|
+
input = open(@path)
|
292
|
+
report = @import.import(input)
|
293
|
+
assert_instance_of(Array, report)
|
294
|
+
assert_equal(7, Drugs::Substance.instances.size)
|
295
|
+
expected = [u("Acebutolol"), u("Aceclofenac"), u("Atenolol"),
|
296
|
+
u("Chlort"), u("Hydralazin"), u("Acemetacin"),
|
297
|
+
u("Almotriptan")]
|
298
|
+
names = Drugs::Substance.instances.collect { |inst|
|
299
|
+
inst.name.de
|
300
|
+
}
|
301
|
+
assert_equal(expected, names)
|
302
|
+
# do it again, nothing should change
|
303
|
+
input = open(@path)
|
304
|
+
report = @import.import(input)
|
305
|
+
assert_instance_of(Array, report)
|
306
|
+
assert_equal(7, Drugs::Substance.instances.size)
|
307
|
+
names = Drugs::Substance.instances.collect { |inst|
|
308
|
+
inst.name.de
|
309
|
+
}
|
310
|
+
assert_equal(expected, names)
|
311
|
+
substance = Drugs::Substance.instances.first
|
312
|
+
assert_instance_of(Drugs::Substance, substance)
|
313
|
+
assert_equal(1, substance.codes.size)
|
314
|
+
code = substance.codes.first
|
315
|
+
assert_instance_of(Util::Code, code)
|
316
|
+
assert_equal('DE', code.country)
|
317
|
+
assert_equal("substance", code.type)
|
318
|
+
assert_equal('ABTL', code.value)
|
319
|
+
end
|
320
|
+
end
|
321
|
+
end
|
322
|
+
end
|
323
|
+
end
|
@@ -0,0 +1,31 @@
|
|
1
|
+
#!/usr/bin/env ruby
|
2
|
+
# Import::TestExcel -- de.oddb.org -- 04.09.2006 -- hwyss@ywesee.com
|
3
|
+
|
4
|
+
$: << File.expand_path('../../lib', File.dirname(__FILE__))
|
5
|
+
|
6
|
+
require 'test/unit'
|
7
|
+
require 'oddb/import/dimdi'
|
8
|
+
|
9
|
+
module ODDB
|
10
|
+
module Import
|
11
|
+
class TestExcel < Test::Unit::TestCase
|
12
|
+
def setup
|
13
|
+
@data_dir = File.expand_path('data', File.dirname(__FILE__))
|
14
|
+
@path = File.expand_path('xls/fb010706.xls', @data_dir)
|
15
|
+
@input = open(@path)
|
16
|
+
@import = Excel.new
|
17
|
+
end
|
18
|
+
def test_parse__and_cell
|
19
|
+
workbook = @import.parse(@input)
|
20
|
+
assert_instance_of(Spreadsheet::Excel::Workbook, workbook)
|
21
|
+
assert_equal(1, workbook.worksheets.size)
|
22
|
+
worksheet = workbook.worksheet(0)
|
23
|
+
assert_instance_of(Spreadsheet::Excel::Worksheet, worksheet)
|
24
|
+
assert_equal(u("PIROXICAM RATIO"), @import.cell(worksheet.row(1), 0))
|
25
|
+
assert_equal(20, @import.cell(worksheet.row(1), 5))
|
26
|
+
assert_equal(Date.new(2006,7),
|
27
|
+
@import.cell(worksheet.row(1), 13))
|
28
|
+
end
|
29
|
+
end
|
30
|
+
end
|
31
|
+
end
|
@@ -0,0 +1,260 @@
|
|
1
|
+
#!/usr/bin/env ruby
|
2
|
+
# Import::TestGkv -- ch.oddb.org -- 17.08.2009 -- hwyss@ywesee.com
|
3
|
+
|
4
|
+
$: << File.expand_path('..', File.dirname(__FILE__))
|
5
|
+
$: << File.expand_path('../../lib', File.dirname(__FILE__))
|
6
|
+
|
7
|
+
require 'test/unit'
|
8
|
+
require 'flexmock'
|
9
|
+
require 'stub/model'
|
10
|
+
require 'oddb/import/gkv'
|
11
|
+
require 'oddb/config'
|
12
|
+
require 'oddb'
|
13
|
+
|
14
|
+
module ODDB
|
15
|
+
module Import
|
16
|
+
class TestGkv < Test::Unit::TestCase
|
17
|
+
include FlexMock::TestCase
|
18
|
+
def setup
|
19
|
+
Drugs::Atc.instances.clear
|
20
|
+
Drugs::Package.instances.clear
|
21
|
+
Drugs::Product.instances.clear
|
22
|
+
Drugs::Sequence.instances.clear
|
23
|
+
Drugs::Substance.instances.clear
|
24
|
+
Business::Company.instances.clear
|
25
|
+
svc = DRb.start_service 'druby://localhost:0'
|
26
|
+
ODDB.config.server_url = svc.uri
|
27
|
+
@import = Gkv.new
|
28
|
+
dir = File.expand_path('var', File.dirname(__FILE__))
|
29
|
+
ODDB.config.var = dir
|
30
|
+
@pdf_dir = File.join dir, 'pdf/gkv'
|
31
|
+
dir = File.expand_path('data', File.dirname(__FILE__))
|
32
|
+
@html_dir = File.join dir, 'html/gkv'
|
33
|
+
dir = File.expand_path 'data/txt/gkv', File.dirname(__FILE__)
|
34
|
+
@path = File.join dir, 'gkv_p1.txt'
|
35
|
+
ODDB.logger = flexmock(:logger)
|
36
|
+
ODDB.logger.should_receive(:error).and_return do |gkv, block|
|
37
|
+
assert_equal 'Gkv', gkv
|
38
|
+
flunk block.call
|
39
|
+
end
|
40
|
+
super
|
41
|
+
end
|
42
|
+
def teardown
|
43
|
+
FileUtils.rm_r @pdf_dir if File.exist?(@pdf_dir)
|
44
|
+
super
|
45
|
+
end
|
46
|
+
def setup_page(url, html, mech=nil)
|
47
|
+
response = {'content-type' => 'text/html'}
|
48
|
+
Mechanize::Page.new(URI.parse(url), response, html, 200, mech)
|
49
|
+
end
|
50
|
+
def simulate_import
|
51
|
+
handler = GkvHandler.new @import.method(:process_page)
|
52
|
+
File.read(@path).each do |line|
|
53
|
+
handler.send_flowing_data line
|
54
|
+
handler.send_line_break
|
55
|
+
end
|
56
|
+
handler.send_page
|
57
|
+
@import.postprocess
|
58
|
+
@import.report
|
59
|
+
end
|
60
|
+
def test_latest_url
|
61
|
+
agent = flexmock(Mechanize.new)
|
62
|
+
url = 'https://www.gkv-spitzenverband.de/Befreiungsliste_Arzneimittel_Versicherte.gkvnet'
|
63
|
+
path = File.join @html_dir, 'Befreiungsliste_Arzneimittel_Versicherte.gkvnet'
|
64
|
+
page = setup_page url, File.read(path), agent
|
65
|
+
agent.should_receive(:get).with(url).and_return(page)
|
66
|
+
expected = 'https://www.gkv-spitzenverband.de/upload/Zuzahlungsbefreit_sort_Name_100901_14383.pdf'
|
67
|
+
assert_equal expected, @import.latest_url(agent)
|
68
|
+
end
|
69
|
+
def test_latest_url_missing_link
|
70
|
+
agent = flexmock(Mechanize.new)
|
71
|
+
url = 'https://www.gkv-spitzenverband.de/Befreiungsliste_Arzneimittel_Versicherte.gkvnet'
|
72
|
+
html = "<html><body>hogehoge</body></html>"
|
73
|
+
page = setup_page url, html, agent
|
74
|
+
agent.should_receive(:get).with(url).and_return(page)
|
75
|
+
expected = nil
|
76
|
+
assert_equal nil, @import.latest_url(agent)
|
77
|
+
end
|
78
|
+
def test_download_latest
|
79
|
+
called = false
|
80
|
+
@import.download_latest @path do |fh|
|
81
|
+
assert_instance_of(File, fh)
|
82
|
+
called = true
|
83
|
+
end
|
84
|
+
assert called, "download_latest did not call block"
|
85
|
+
@import.download_latest @path do |fh|
|
86
|
+
flunk "download_latest should not call block, if files are identical"
|
87
|
+
end
|
88
|
+
assert true
|
89
|
+
end
|
90
|
+
def test_import
|
91
|
+
existing = Drugs::Package.new
|
92
|
+
existing.add_code(Util::Code.new(:cid, '4000741', 'DE'))
|
93
|
+
existing.add_part(Drugs::Part.new)
|
94
|
+
existing.save
|
95
|
+
sequence = Drugs::Sequence.new
|
96
|
+
product = Drugs::Product.new
|
97
|
+
product.name.de = 'A product'
|
98
|
+
existing.sequence = sequence
|
99
|
+
sequence.product = product
|
100
|
+
assert_nil(existing.code(:zuzahlungsbefreit))
|
101
|
+
|
102
|
+
## simulate a call to @import.import
|
103
|
+
report = simulate_import
|
104
|
+
|
105
|
+
assert_instance_of(Array, report)
|
106
|
+
assert_equal(3, Drugs::Product.instances.size)
|
107
|
+
assert_equal(true, Drugs::Product.instances.include?(product))
|
108
|
+
assert_equal(1, product.sequences.size)
|
109
|
+
sequence = product.sequences.first
|
110
|
+
#assert_equal(1, sequence.compositions.size)
|
111
|
+
#composition = sequence.compositions.first
|
112
|
+
#assert_equal(2, composition.active_agents.size)
|
113
|
+
#agent1 = composition.active_agents.at(0)
|
114
|
+
#agent2 = composition.active_agents.at(1)
|
115
|
+
#assert_equal('Allopurinol', agent1.substance.name.de)
|
116
|
+
#assert_equal(Drugs::Dose.new(100, 'mg'), agent1.dose)
|
117
|
+
#assert_equal('Benzbromaron', agent2.substance.name.de)
|
118
|
+
#assert_equal(Drugs::Dose.new(20, 'mg'), agent2.dose)
|
119
|
+
code = existing.code(:zuzahlungsbefreit)
|
120
|
+
assert_instance_of(Util::Code, code)
|
121
|
+
assert_equal(true, code.value)
|
122
|
+
confirmed = @import.instance_variable_get('@confirmed_pzns')
|
123
|
+
assert_equal(11, confirmed.size)
|
124
|
+
#assert_equal(2, Business::Company.instances.size)
|
125
|
+
#comp = Business::Company.instances.first
|
126
|
+
#assert_equal('Ratiopharm GmbH', comp.name.de)
|
127
|
+
|
128
|
+
# do it again, nothing should change
|
129
|
+
existing.code(:zuzahlungsbefreit).value = false
|
130
|
+
|
131
|
+
## simulate a call to @import.import
|
132
|
+
report = simulate_import
|
133
|
+
|
134
|
+
assert_instance_of(Array, report)
|
135
|
+
assert_equal(3, Drugs::Product.instances.size)
|
136
|
+
assert_equal(true, Drugs::Product.instances.include?(product))
|
137
|
+
assert_equal(1, product.sequences.size)
|
138
|
+
sequence = product.sequences.first
|
139
|
+
#assert_equal(1, sequence.compositions.size)
|
140
|
+
#composition = sequence.compositions.first
|
141
|
+
#assert_equal(2, composition.active_agents.size)
|
142
|
+
#agent1 = composition.active_agents.at(0)
|
143
|
+
#agent2 = composition.active_agents.at(1)
|
144
|
+
#assert_equal('Allopurinol', agent1.substance.name.de)
|
145
|
+
#assert_equal(Drugs::Dose.new(100, 'mg'), agent1.dose)
|
146
|
+
#assert_equal('Benzbromaron', agent2.substance.name.de)
|
147
|
+
#assert_equal(Drugs::Dose.new(20, 'mg'), agent2.dose)
|
148
|
+
code = existing.code(:zuzahlungsbefreit)
|
149
|
+
assert_instance_of(Util::Code, code)
|
150
|
+
assert_equal(true, code.value)
|
151
|
+
confirmed = @import.instance_variable_get('@confirmed_pzns')
|
152
|
+
assert_equal(11, confirmed.size)
|
153
|
+
#assert_equal(2, Business::Company.instances.size)
|
154
|
+
#comp = Business::Company.instances.first
|
155
|
+
#assert_equal('Ratiopharm GmbH', comp.name.de)
|
156
|
+
end
|
157
|
+
def test_import__ml
|
158
|
+
existing = Drugs::Package.new
|
159
|
+
existing.add_code(Util::Code.new(:cid, '4000646', 'DE'))
|
160
|
+
existing.add_part(Drugs::Part.new)
|
161
|
+
existing.save
|
162
|
+
sequence = Drugs::Sequence.new
|
163
|
+
product = Drugs::Product.new
|
164
|
+
product.name.de = 'A product'
|
165
|
+
existing.sequence = sequence
|
166
|
+
sequence.product = product
|
167
|
+
assert_nil(existing.code(:zuzahlungsbefreit))
|
168
|
+
report = simulate_import
|
169
|
+
assert_instance_of(Array, report)
|
170
|
+
assert_equal(3, Drugs::Product.instances.size)
|
171
|
+
assert_equal(true, Drugs::Product.instances.include?(product))
|
172
|
+
assert_equal(1, product.sequences.size)
|
173
|
+
sequence = product.sequences.first
|
174
|
+
#assert_equal(1, sequence.compositions.size)
|
175
|
+
#composition = sequence.compositions.first
|
176
|
+
#assert_equal(1, composition.active_agents.size)
|
177
|
+
#agent1 = composition.active_agents.at(0)
|
178
|
+
#assert_equal('Amoxicillin-3-Wasser', agent1.substance.name.de)
|
179
|
+
#assert_equal(Drugs::Dose.new(287, 'mg'), agent1.dose)
|
180
|
+
code = existing.code(:zuzahlungsbefreit)
|
181
|
+
assert_instance_of(Util::Code, code)
|
182
|
+
assert_equal(true, code.value)
|
183
|
+
assert_equal(1, existing.parts.size)
|
184
|
+
part = existing.parts.first
|
185
|
+
assert_equal(6, part.size)
|
186
|
+
assert_equal('0.5 ml', part.quantity.to_s)
|
187
|
+
|
188
|
+
# do it again, nothing should change
|
189
|
+
report = simulate_import
|
190
|
+
assert_instance_of(Array, report)
|
191
|
+
assert_equal(3, Drugs::Product.instances.size)
|
192
|
+
assert_equal(true, Drugs::Product.instances.include?(product))
|
193
|
+
assert_equal(1, product.sequences.size)
|
194
|
+
sequence = product.sequences.first
|
195
|
+
#assert_equal(1, sequence.compositions.size)
|
196
|
+
#composition = sequence.compositions.first
|
197
|
+
#assert_equal(1, composition.active_agents.size)
|
198
|
+
#agent1 = composition.active_agents.at(0)
|
199
|
+
#assert_equal('Amoxicillin-3-Wasser', agent1.substance.name.de)
|
200
|
+
#assert_equal(Drugs::Dose.new(287, 'mg'), agent1.dose)
|
201
|
+
code = existing.code(:zuzahlungsbefreit)
|
202
|
+
assert_instance_of(Util::Code, code)
|
203
|
+
assert_equal(true, code.value)
|
204
|
+
assert_equal(1, existing.parts.size)
|
205
|
+
part = existing.parts.first
|
206
|
+
assert_equal(6, part.size)
|
207
|
+
assert_equal('0.5 ml', part.quantity.to_s)
|
208
|
+
end
|
209
|
+
def test_postprocess
|
210
|
+
product = Drugs::Product.new
|
211
|
+
product.name.de = 'Product 100% Company'
|
212
|
+
product.save
|
213
|
+
company = Business::Company.new
|
214
|
+
company.name.de = 'Company AG'
|
215
|
+
company.save
|
216
|
+
@import.postprocess
|
217
|
+
assert_equal(company, product.company)
|
218
|
+
end
|
219
|
+
def test_postprocess__comp
|
220
|
+
product = Drugs::Product.new
|
221
|
+
product.name.de = 'Product 100% Producer Comp'
|
222
|
+
product.save
|
223
|
+
company = Business::Company.new
|
224
|
+
company.name.de = 'Producer AG'
|
225
|
+
company.save
|
226
|
+
@import.postprocess
|
227
|
+
assert_equal(company, product.company)
|
228
|
+
end
|
229
|
+
def test_postprocess__search
|
230
|
+
product = Drugs::Product.new
|
231
|
+
product.name.de = 'Product 100% Manu'
|
232
|
+
product.save
|
233
|
+
company = Business::Company.new
|
234
|
+
company.name.de = 'Manufacturer AG'
|
235
|
+
company.save
|
236
|
+
@import.postprocess
|
237
|
+
assert_equal(company, product.company)
|
238
|
+
end
|
239
|
+
def test_postprocess__prune_packages
|
240
|
+
pzn1 = Util::Code.new(:cid, '12345', 'DE')
|
241
|
+
zzb1 = Util::Code.new(:zuzahlungsbefreit, 'true', 'DE')
|
242
|
+
pac1 = Drugs::Package.new
|
243
|
+
pac1.add_code(pzn1)
|
244
|
+
pac1.add_code(zzb1)
|
245
|
+
pac1.save
|
246
|
+
pzn2 = Util::Code.new(:cid, '54321', 'DE')
|
247
|
+
zzb2 = Util::Code.new(:zuzahlungsbefreit, 'true', 'DE')
|
248
|
+
pac2 = Drugs::Package.new
|
249
|
+
pac2.add_code(pzn2)
|
250
|
+
pac2.add_code(zzb2)
|
251
|
+
pac2.save
|
252
|
+
@import.instance_variable_set('@confirmed_pzns',
|
253
|
+
pac1.code(:cid).value => true)
|
254
|
+
@import.postprocess
|
255
|
+
assert_equal('true', zzb1.value)
|
256
|
+
assert_equal(false, zzb2.value)
|
257
|
+
end
|
258
|
+
end
|
259
|
+
end
|
260
|
+
end
|