biointerchange 0.2.2 → 1.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (55) hide show
  1. data/Gemfile +1 -0
  2. data/README.md +269 -19
  3. data/VERSION +1 -1
  4. data/examples/bininda_emonds_mammals.new +1 -0
  5. data/examples/rdfization.rb +17 -0
  6. data/examples/tree1.new +1 -0
  7. data/examples/tree2.new +1 -0
  8. data/examples/vocabulary.rb +26 -5
  9. data/generators/javaify.rb +12 -18
  10. data/generators/make_supplement_releases.rb +2 -0
  11. data/generators/pythonify.rb +21 -8
  12. data/generators/rdfxml.rb +15 -1
  13. data/lib/biointerchange/cdao.rb +2014 -0
  14. data/lib/biointerchange/core.rb +70 -77
  15. data/lib/biointerchange/genomics/gff3_rdf_ntriples.rb +16 -0
  16. data/lib/biointerchange/genomics/gff3_reader.rb +18 -4
  17. data/lib/biointerchange/genomics/gvf_reader.rb +14 -0
  18. data/lib/biointerchange/phylogenetics/cdao_rdf_ntriples.rb +108 -0
  19. data/lib/biointerchange/phylogenetics/newick_reader.rb +81 -0
  20. data/lib/biointerchange/phylogenetics/tree_set.rb +50 -0
  21. data/lib/biointerchange/registry.rb +50 -8
  22. data/lib/biointerchange/so.rb +150 -0
  23. data/lib/biointerchange/textmining/pdfx_xml_reader.rb +21 -2
  24. data/lib/biointerchange/textmining/pubannos_json_reader.rb +24 -1
  25. data/lib/biointerchange/textmining/text_mining_rdf_ntriples.rb +9 -0
  26. data/lib/biointerchange/textmining/text_mining_reader.rb +5 -5
  27. data/spec/phylogenetics_spec.rb +79 -0
  28. data/supplemental/java/biointerchange/pom.xml +1 -1
  29. data/supplemental/java/biointerchange/src/main/java/org/biointerchange/vocabulary/CDAO.java +2602 -0
  30. data/supplemental/java/biointerchange/src/main/java/org/biointerchange/vocabulary/FALDO.java +30 -28
  31. data/supplemental/java/biointerchange/src/main/java/org/biointerchange/vocabulary/GFF3O.java +136 -104
  32. data/supplemental/java/biointerchange/src/main/java/org/biointerchange/vocabulary/GVF1O.java +367 -278
  33. data/supplemental/java/biointerchange/src/main/java/org/biointerchange/vocabulary/SIO.java +4388 -3127
  34. data/supplemental/java/biointerchange/src/main/java/org/biointerchange/vocabulary/SO.java +5970 -4351
  35. data/supplemental/java/biointerchange/src/main/java/org/biointerchange/vocabulary/SOFA.java +733 -544
  36. data/supplemental/java/biointerchange/src/test/java/org/biointerchange/AppTest.java +3 -1
  37. data/supplemental/python/biointerchange/cdao.py +2021 -0
  38. data/supplemental/python/biointerchange/faldo.py +37 -38
  39. data/supplemental/python/biointerchange/gff3o.py +156 -157
  40. data/supplemental/python/biointerchange/goxref.py +172 -172
  41. data/supplemental/python/biointerchange/gvf1o.py +428 -429
  42. data/supplemental/python/biointerchange/sio.py +3133 -3134
  43. data/supplemental/python/biointerchange/so.py +6626 -6527
  44. data/supplemental/python/biointerchange/sofa.py +790 -791
  45. data/supplemental/python/example.py +23 -5
  46. data/supplemental/python/setup.py +2 -2
  47. data/web/about.html +1 -0
  48. data/web/api.html +223 -15
  49. data/web/biointerchange.js +27 -6
  50. data/web/cli.html +8 -3
  51. data/web/index.html +6 -2
  52. data/web/ontologies.html +3 -0
  53. data/web/service/rdfizer.fcgi +7 -15
  54. data/web/webservices.html +6 -2
  55. metadata +30 -3
@@ -0,0 +1,2014 @@
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+ require 'rdf'
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+ module BioInterchange
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+
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+ class CDAO
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000142)
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+ def self.has_Character
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000142')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000143)
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+ def self.belongs_to_Edge_as_Child
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000143')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000144)
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+ def self.has_Ancestor
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000144')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000145)
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+ def self.has_Nucleotide_State
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000145')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000146)
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+ def self.belongs_to_Edge
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000146')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000147)
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+ def self.belongs_to_Character_State_Data_Matrix
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000147')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000148)
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+ def self.has_Root
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000148')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000149)
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+ def self.has_Child
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000149')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000150)
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+ def self.has_First_Coordinate_Item
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000150')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000151)
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+ def self.has_Coordinate
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000151')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000152)
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+ def self.belongs_to_Continuous_Character
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000152')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000153)
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+ def self.has_Datum
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000153')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000154)
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+ def self.has_Standard_Datum
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000154')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000155)
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+ def self.subtree_of
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000155')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000156)
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+ def self.has_Amino_Acid_State
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000156')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000157)
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+ def self.is_annotation_of
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000157')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000158)
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+ def self.has_RNA_Datum
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000158')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000159)
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+ def self.has_Left_State
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000159')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000160)
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+ def self.precedes
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000160')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000161)
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+ def self.exclude
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000161')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000162)
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+ def self.has_Node
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000162')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000163)
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+ def self.nca_node_of
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000163')
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+ end
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+
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+ # Associates a TU to some external taxonomy reference.
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+ # (http://purl.obolibrary.org/obo/CDAO_0000164)
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+ def self.has_External_Reference
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000164')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000165)
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+ def self.has_Coordinate_System
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000165')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000166)
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+ def self.belongs_to_Nucleotide_Character
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000166')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000167)
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+ def self.connects_to
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000167')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000168)
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+ def self.has_Amino_Acid_Datum
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000168')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000169)
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+ def self.hereditary_change_of
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000169')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000170)
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+ def self.has_Compound_Datum
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000170')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000171)
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+ def self.has_Descendants
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000171')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000172)
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+ def self.reconciliation_of
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000172')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000173)
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+ def self.belongs_to_Amino_Acid_Character
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000173')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000174)
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+ def self.has_Descendant
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000174')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000175)
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+ def self.has_Continuous_State
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000175')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000176)
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+ def self.has_Type
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000176')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000177)
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+ def self.belongs_to_Edge_as_Parent
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000177')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000178)
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+ def self.has
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000179)
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+ def self.has_Parent
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000179')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000180)
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+ def self.belongs_to_Compound_Character
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000180')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000181)
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+ def self.homologous_to
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000181')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000182)
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+ def self.has_Change_Component
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000182')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000183)
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+ def self.has_Categorical_Datum
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000183')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000184)
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+ def self.has_State
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000184')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000185)
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+ def self.has_Left_Node
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000185')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000186)
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+ def self.has_Right_State
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000186')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000187)
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+ def self.represents_TU
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000187')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000188)
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+ def self.exclude_Node
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000188')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000189)
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+ def self.has_Compound_State
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000189')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000190)
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+ def self.belongs_to
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000190')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000191)
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+ def self.belongs_to_TU
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000191')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000192)
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+ def self.belongs_to_Network
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000192')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000193)
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+ def self.has_Annotation
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000193')
316
+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000194)
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+ def self.part_of
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000194')
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+ end
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+
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+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000195)
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+ def self.has_Nucleotide_Datum
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000195')
328
+ end
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+
330
+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000196)
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+ def self.represented_by_Node
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000196')
334
+ end
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+
336
+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000197)
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+ def self.has_Remaining_Coordinate_List
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000197')
340
+ end
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+
342
+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000198)
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+ def self.has_Element
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000198')
346
+ end
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+
348
+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000199)
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+ def self.exclude_Subtree
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000199')
352
+ end
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+
354
+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000200)
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+ def self.belongs_to_Tree
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000200')
358
+ end
359
+
360
+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000201)
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+ def self.has_Parent_Node
363
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000201')
364
+ end
365
+
366
+ # -- No comment or description provided. --
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+ # (http://purl.obolibrary.org/obo/CDAO_0000202)
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+ def self.has_Lineage_node
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+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000202')
370
+ end
371
+
372
+ # -- No comment or description provided. --
373
+ # (http://purl.obolibrary.org/obo/CDAO_0000203)
374
+ def self.belongs_to_Tree_as_Root
375
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000203')
376
+ end
377
+
378
+ # -- No comment or description provided. --
379
+ # (http://purl.obolibrary.org/obo/CDAO_0000204)
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+ def self.has_Hereditary_Change
381
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000204')
382
+ end
383
+
384
+ # -- No comment or description provided. --
385
+ # (http://purl.obolibrary.org/obo/CDAO_0000205)
386
+ def self.belongs_to_Character
387
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000205')
388
+ end
389
+
390
+ # -- No comment or description provided. --
391
+ # (http://purl.obolibrary.org/obo/CDAO_0000206)
392
+ def self.has_Molecular_Datum
393
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000206')
394
+ end
395
+
396
+ # -- No comment or description provided. --
397
+ # (http://purl.obolibrary.org/obo/CDAO_0000207)
398
+ def self.has_Continuous_Datum
399
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000207')
400
+ end
401
+
402
+ # -- No comment or description provided. --
403
+ # (http://purl.obolibrary.org/obo/CDAO_0000208)
404
+ def self.has_TU
405
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000208')
406
+ end
407
+
408
+ # -- No comment or description provided. --
409
+ # (http://purl.obolibrary.org/obo/CDAO_0000209)
410
+ def self.has_Child_Node
411
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000209')
412
+ end
413
+
414
+ # -- No comment or description provided. --
415
+ # (http://purl.obolibrary.org/obo/CDAO_0000210)
416
+ def self.has_Right_Node
417
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000210')
418
+ end
419
+
420
+ # -- No comment or description provided. --
421
+ # (http://purl.obolibrary.org/obo/CDAO_0000211)
422
+ def self.has_Precision
423
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000211')
424
+ end
425
+
426
+ # -- No comment or description provided. --
427
+ # (http://purl.obolibrary.org/obo/CDAO_0000212)
428
+ def self.has_Point_Coordinate_Value
429
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000212')
430
+ end
431
+
432
+ # -- No comment or description provided. --
433
+ # (http://purl.obolibrary.org/obo/CDAO_0000213)
434
+ def self.has_Int_Value
435
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000213')
436
+ end
437
+
438
+ # -- No comment or description provided. --
439
+ # (http://purl.obolibrary.org/obo/CDAO_0000214)
440
+ def self.has_Support_Value
441
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000214')
442
+ end
443
+
444
+ # -- No comment or description provided. --
445
+ # (http://purl.obolibrary.org/obo/CDAO_0000215)
446
+ def self.has_Value
447
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000215')
448
+ end
449
+
450
+ # -- No comment or description provided. --
451
+ # (http://purl.obolibrary.org/obo/CDAO_0000216)
452
+ def self.has_Uncertainty_Factor
453
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000216')
454
+ end
455
+
456
+ # -- No comment or description provided. --
457
+ # (http://purl.obolibrary.org/obo/CDAO_0000217)
458
+ def self.has_Range_End_Value
459
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000217')
460
+ end
461
+
462
+ # -- No comment or description provided. --
463
+ # (http://purl.obolibrary.org/obo/CDAO_0000218)
464
+ def self.has_Float_Value
465
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000218')
466
+ end
467
+
468
+ # -- No comment or description provided. --
469
+ # (http://purl.obolibrary.org/obo/CDAO_0000219)
470
+ def self.has_Range_Start_Value
471
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000219')
472
+ end
473
+
474
+ # -- No comment or description provided. --
475
+ # (http://purl.obolibrary.org/obo/CDAO_0000002)
476
+ def self.DesoxiRibonucleotideResidueStateDatum
477
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000002')
478
+ end
479
+
480
+ # -- No comment or description provided. --
481
+ # (http://purl.obolibrary.org/obo/CDAO_0000003)
482
+ def self.CoordinatePoint
483
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000003')
484
+ end
485
+
486
+ # -- No comment or description provided. --
487
+ # (http://purl.obolibrary.org/obo/CDAO_0000004)
488
+ def self.Lineage
489
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000004')
490
+ end
491
+
492
+ # -- No comment or description provided. --
493
+ # (http://purl.obolibrary.org/obo/CDAO_0000005)
494
+ def self.Phylo4Tree
495
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000005')
496
+ end
497
+
498
+ # -- No comment or description provided. --
499
+ # (http://purl.obolibrary.org/obo/CDAO_0000006)
500
+ def self.Network
501
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000006')
502
+ end
503
+
504
+ # This is a non-computible description of a model, not the fully specified mathematical model, which typically relates the probability of a transformation to various parameters.
505
+ # (http://purl.obolibrary.org/obo/CDAO_0000007)
506
+ def self.ModelDescription
507
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000007')
508
+ end
509
+
510
+ # -- No comment or description provided. --
511
+ # (http://purl.obolibrary.org/obo/CDAO_0000008)
512
+ def self.StandardStateDatum
513
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000008')
514
+ end
515
+
516
+ # -- No comment or description provided. --
517
+ # (http://purl.obolibrary.org/obo/CDAO_0000009)
518
+ def self.ContinuousCharacterLengthType
519
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000009')
520
+ end
521
+
522
+ # -- No comment or description provided. --
523
+ # (http://purl.obolibrary.org/obo/CDAO_0000010)
524
+ def self.ContinuousCharBayesianLengthType
525
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000010')
526
+ end
527
+
528
+ # -- No comment or description provided. --
529
+ # (http://purl.obolibrary.org/obo/CDAO_0000011)
530
+ def self.NEXUSTreeBlock
531
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000011')
532
+ end
533
+
534
+ # -- No comment or description provided. --
535
+ # (http://purl.obolibrary.org/obo/CDAO_0000012)
536
+ def self.RootedTree
537
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000012')
538
+ end
539
+
540
+ # -- No comment or description provided. --
541
+ # (http://purl.obolibrary.org/obo/CDAO_0000013)
542
+ def self.Kimura2Parameters
543
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000013')
544
+ end
545
+
546
+ # -- No comment or description provided. --
547
+ # (http://purl.obolibrary.org/obo/CDAO_0000014)
548
+ def self.TreeProcedure
549
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000014')
550
+ end
551
+
552
+ # This class should be renamed. These are not generic states but non-concrete states including gap, unknown and missing.
553
+ # (http://purl.obolibrary.org/obo/CDAO_0000015)
554
+ def self.Generic_State
555
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000015')
556
+ end
557
+
558
+ # -- No comment or description provided. --
559
+ # (http://purl.obolibrary.org/obo/CDAO_0000016)
560
+ def self.UnrootedSubtree
561
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000016')
562
+ end
563
+
564
+ # -- No comment or description provided. --
565
+ # (http://purl.obolibrary.org/obo/CDAO_0000017)
566
+ def self.UnresolvedTree
567
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000017')
568
+ end
569
+
570
+ # -- No comment or description provided. --
571
+ # (http://purl.obolibrary.org/obo/CDAO_0000018)
572
+ def self.BifurcatingTree
573
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000018')
574
+ end
575
+
576
+ # -- No comment or description provided. --
577
+ # (http://purl.obolibrary.org/obo/CDAO_0000019)
578
+ def self.ContinuousStateDatum
579
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000019')
580
+ end
581
+
582
+ # -- No comment or description provided. --
583
+ # (http://purl.obolibrary.org/obo/CDAO_0000020)
584
+ def self.SubstitutionModel
585
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000020')
586
+ end
587
+
588
+ # -- No comment or description provided. --
589
+ # (http://purl.obolibrary.org/obo/CDAO_0000021)
590
+ def self.JukesKantor
591
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000021')
592
+ end
593
+
594
+ # drawing from seqloc categories from NCBI at http://www.ncbi.nlm.nih.gov/IEB/ToolBox/SDKDOCS/SEQLOC.HTML#_Seq-loc:_Locations_on
595
+ # (http://purl.obolibrary.org/obo/CDAO_0000022)
596
+ def self.DatumCoordinate
597
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000022')
598
+ end
599
+
600
+ # -- No comment or description provided. --
601
+ # (http://purl.obolibrary.org/obo/CDAO_0000023)
602
+ def self.UnresolvedRootedTree
603
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000023')
604
+ end
605
+
606
+ # -- No comment or description provided. --
607
+ # (http://purl.obolibrary.org/obo/CDAO_0000024)
608
+ def self.Branch
609
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000024')
610
+ end
611
+
612
+ # -- No comment or description provided. --
613
+ # (http://purl.obolibrary.org/obo/CDAO_0000025)
614
+ def self.CharacterStateDataMatrixAnnotation
615
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000025')
616
+ end
617
+
618
+ # -- No comment or description provided. --
619
+ # (http://purl.obolibrary.org/obo/CDAO_0000026)
620
+ def self.AncestralNode
621
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000026')
622
+ end
623
+
624
+ # -- No comment or description provided. --
625
+ # (http://purl.obolibrary.org/obo/CDAO_0000027)
626
+ def self.UnresolvedUnrootedTree
627
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000027')
628
+ end
629
+
630
+ # -- No comment or description provided. --
631
+ # (http://purl.obolibrary.org/obo/CDAO_0000029)
632
+ def self.UncertainStateDomain
633
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000029')
634
+ end
635
+
636
+ # -- No comment or description provided. --
637
+ # (http://purl.obolibrary.org/obo/CDAO_0000030)
638
+ def self.ReconcileTree
639
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000030')
640
+ end
641
+
642
+ # -- No comment or description provided. --
643
+ # (http://purl.obolibrary.org/obo/CDAO_0000031)
644
+ def self.Continuous
645
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000031')
646
+ end
647
+
648
+ # -- No comment or description provided. --
649
+ # (http://purl.obolibrary.org/obo/CDAO_0000032)
650
+ def self.AlignmentProcedure
651
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000032')
652
+ end
653
+
654
+ # -- No comment or description provided. --
655
+ # (http://purl.obolibrary.org/obo/CDAO_0000033)
656
+ def self.Dichotomy
657
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000033')
658
+ end
659
+
660
+ # -- No comment or description provided. --
661
+ # (http://purl.obolibrary.org/obo/CDAO_0000034)
662
+ def self.Molecular
663
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000034')
664
+ end
665
+
666
+ # -- No comment or description provided. --
667
+ # (http://purl.obolibrary.org/obo/CDAO_0000035)
668
+ def self.ContinuousCharParsimonyLengthType
669
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000035')
670
+ end
671
+
672
+ # -- No comment or description provided. --
673
+ # (http://purl.obolibrary.org/obo/CDAO_0000039)
674
+ def self.Categorical
675
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000039')
676
+ end
677
+
678
+ # Its possible that this base class should be discarded and that annotations should inherit from an imported base class if one exists.
679
+ # (http://purl.obolibrary.org/obo/CDAO_0000040)
680
+ def self.CDAOAnnotation
681
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000040')
682
+ end
683
+
684
+ # -- No comment or description provided. --
685
+ # (http://purl.obolibrary.org/obo/CDAO_0000041)
686
+ def self.originationEvent
687
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000041')
688
+ end
689
+
690
+ # -- No comment or description provided. --
691
+ # (http://purl.obolibrary.org/obo/CDAO_0000042)
692
+ def self.Polytomy
693
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000042')
694
+ end
695
+
696
+ # -- No comment or description provided. --
697
+ # (http://purl.obolibrary.org/obo/CDAO_0000043)
698
+ def self.PolymorphicStateDomain
699
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000043')
700
+ end
701
+
702
+ # -- No comment or description provided. --
703
+ # (http://purl.obolibrary.org/obo/CDAO_0000044)
704
+ def self.TreeAnnotation
705
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000044')
706
+ end
707
+
708
+ # -- No comment or description provided. --
709
+ # (http://purl.obolibrary.org/obo/CDAO_0000045)
710
+ def self.Standard
711
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000045')
712
+ end
713
+
714
+ # Its possible that this should not be classed as an 'annotation' since it contains data rather than meta-data.
715
+ # (http://purl.obolibrary.org/obo/CDAO_0000046)
716
+ def self.EdgeLength
717
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000046')
718
+ end
719
+
720
+ # -- No comment or description provided. --
721
+ # (http://purl.obolibrary.org/obo/CDAO_0000047)
722
+ def self.RibonucleotideResidue
723
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000047')
724
+ end
725
+
726
+ # -- No comment or description provided. --
727
+ # (http://purl.obolibrary.org/obo/CDAO_0000048)
728
+ def self.Clade
729
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000048')
730
+ end
731
+
732
+ # -- No comment or description provided. --
733
+ # (http://purl.obolibrary.org/obo/CDAO_0000049)
734
+ def self.DiscreteCharParsimonyLengthType
735
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000049')
736
+ end
737
+
738
+ # -- No comment or description provided. --
739
+ # (http://purl.obolibrary.org/obo/CDAO_0000050)
740
+ def self.MolecularStateDatum
741
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000050')
742
+ end
743
+
744
+ # -- No comment or description provided. --
745
+ # (http://purl.obolibrary.org/obo/CDAO_0000051)
746
+ def self.PolyphyleticGroup
747
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000051')
748
+ end
749
+
750
+ # -- No comment or description provided. --
751
+ # (http://purl.obolibrary.org/obo/CDAO_0000052)
752
+ def self.NexusDataBlock
753
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000052')
754
+ end
755
+
756
+ # -- No comment or description provided. --
757
+ # (http://purl.obolibrary.org/obo/CDAO_0000053)
758
+ def self.BranchingNode
759
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000053')
760
+ end
761
+
762
+ # -- No comment or description provided. --
763
+ # (http://purl.obolibrary.org/obo/CDAO_0000055)
764
+ def self.Compound
765
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000055')
766
+ end
767
+
768
+ # -- No comment or description provided. --
769
+ # (http://purl.obolibrary.org/obo/CDAO_0000056)
770
+ def self.CharacterStateDataMatrix
771
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000056')
772
+ end
773
+
774
+ # -- No comment or description provided. --
775
+ # (http://purl.obolibrary.org/obo/CDAO_0000057)
776
+ def self.RibonucleotideResidueStateDatum
777
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000057')
778
+ end
779
+
780
+ # -- No comment or description provided. --
781
+ # (http://purl.obolibrary.org/obo/CDAO_0000058)
782
+ def self.TimeCalibratedLengthType
783
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000058')
784
+ end
785
+
786
+ # -- No comment or description provided. --
787
+ # (http://purl.obolibrary.org/obo/CDAO_0000059)
788
+ def self.SetOfNodes
789
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000059')
790
+ end
791
+
792
+ # -- No comment or description provided. --
793
+ # (http://purl.obolibrary.org/obo/CDAO_0000060)
794
+ def self.MRCANode
795
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000060')
796
+ end
797
+
798
+ # -- No comment or description provided. --
799
+ # (http://purl.obolibrary.org/obo/CDAO_0000061)
800
+ def self.FASTADataMatrix
801
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000061')
802
+ end
803
+
804
+ # -- No comment or description provided. --
805
+ # (http://purl.obolibrary.org/obo/CDAO_0000062)
806
+ def self.evolutionaryTransition
807
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000062')
808
+ end
809
+
810
+ # -- No comment or description provided. --
811
+ # (http://purl.obolibrary.org/obo/CDAO_0000063)
812
+ def self.EdgeLengthType
813
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000063')
814
+ end
815
+
816
+ # -- No comment or description provided. --
817
+ # (http://purl.obolibrary.org/obo/CDAO_0000064)
818
+ def self.cladogeneticChange
819
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000064')
820
+ end
821
+
822
+ # -- No comment or description provided. --
823
+ # (http://purl.obolibrary.org/obo/CDAO_0000065)
824
+ def self.anageneticChange
825
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000065')
826
+ end
827
+
828
+ # -- No comment or description provided. --
829
+ # (http://purl.obolibrary.org/obo/CDAO_0000066)
830
+ def self.TUAnnotation
831
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000066')
832
+ end
833
+
834
+ # -- No comment or description provided. --
835
+ # (http://purl.obolibrary.org/obo/CDAO_0000067)
836
+ def self.PhyloTree
837
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000067')
838
+ end
839
+
840
+ # -- No comment or description provided. --
841
+ # (http://purl.obolibrary.org/obo/CDAO_0000068)
842
+ def self.ContinuousCharacter
843
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000068')
844
+ end
845
+
846
+ # -- No comment or description provided. --
847
+ # (http://purl.obolibrary.org/obo/CDAO_0000069)
848
+ def self.PHYLIPTree
849
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000069')
850
+ end
851
+
852
+ # -- No comment or description provided. --
853
+ # (http://purl.obolibrary.org/obo/CDAO_0000070)
854
+ def self.Subtree
855
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000070')
856
+ end
857
+
858
+ # Traits shown to be relevant for phylogenetic classification
859
+ # (http://purl.obolibrary.org/obo/CDAO_0000071)
860
+ def self.Character
861
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000071')
862
+ end
863
+
864
+ # -- No comment or description provided. --
865
+ # (http://purl.obolibrary.org/obo/CDAO_0000072)
866
+ def self.GalledTree
867
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000072')
868
+ end
869
+
870
+ # -- No comment or description provided. --
871
+ # (http://purl.obolibrary.org/obo/CDAO_0000073)
872
+ def self.SpeciesTree
873
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000073')
874
+ end
875
+
876
+ # -- No comment or description provided. --
877
+ # (http://purl.obolibrary.org/obo/CDAO_0000074)
878
+ def self.TreeFormat
879
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000074')
880
+ end
881
+
882
+ # -- No comment or description provided. --
883
+ # (http://purl.obolibrary.org/obo/CDAO_0000075)
884
+ def self.StandardCharacter
885
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000075')
886
+ end
887
+
888
+ # -- No comment or description provided. --
889
+ # (http://purl.obolibrary.org/obo/CDAO_0000076)
890
+ def self.AminoAcidResidue
891
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000076')
892
+ end
893
+
894
+ # -- No comment or description provided. --
895
+ # (http://purl.obolibrary.org/obo/CDAO_0000077)
896
+ def self.geneDuplication
897
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000077')
898
+ end
899
+
900
+ # -- No comment or description provided. --
901
+ # (http://purl.obolibrary.org/obo/CDAO_0000078)
902
+ def self.CompoundCharacter
903
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000078')
904
+ end
905
+
906
+ # -- No comment or description provided. --
907
+ # (http://purl.obolibrary.org/obo/CDAO_0000079)
908
+ def self.SIMMAPTree
909
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000079')
910
+ end
911
+
912
+ # -- No comment or description provided. --
913
+ # (http://purl.obolibrary.org/obo/CDAO_0000080)
914
+ def self.CommonAncestralNode
915
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000080')
916
+ end
917
+
918
+ # -- No comment or description provided. --
919
+ # (http://purl.obolibrary.org/obo/CDAO_0000081)
920
+ def self.NewickTree
921
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000081')
922
+ end
923
+
924
+ # -- No comment or description provided. --
925
+ # (http://purl.obolibrary.org/obo/CDAO_0000082)
926
+ def self.TimeProportionalLengthType
927
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000082')
928
+ end
929
+
930
+ # -- No comment or description provided. --
931
+ # (http://purl.obolibrary.org/obo/CDAO_0000083)
932
+ def self.DiscreteCharDistanceLengthType
933
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000083')
934
+ end
935
+
936
+ # -- No comment or description provided. --
937
+ # (http://purl.obolibrary.org/obo/CDAO_0000084)
938
+ def self.StarTree
939
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000084')
940
+ end
941
+
942
+ # -- No comment or description provided. --
943
+ # (http://purl.obolibrary.org/obo/CDAO_0000085)
944
+ def self.FullyResolvedUnrootedTree
945
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000085')
946
+ end
947
+
948
+ # -- No comment or description provided. --
949
+ # (http://purl.obolibrary.org/obo/CDAO_0000086)
950
+ def self.ParaphyleticGroup
951
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000086')
952
+ end
953
+
954
+ # -- No comment or description provided. --
955
+ # (http://purl.obolibrary.org/obo/CDAO_0000087)
956
+ def self.geneticEvent
957
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000087')
958
+ end
959
+
960
+ # -- No comment or description provided. --
961
+ # (http://purl.obolibrary.org/obo/CDAO_0000088)
962
+ def self.UnrootedTree
963
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000088')
964
+ end
965
+
966
+ # -- No comment or description provided. --
967
+ # (http://purl.obolibrary.org/obo/CDAO_0000089)
968
+ def self.CategoricalStateDatum
969
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000089')
970
+ end
971
+
972
+ # -- No comment or description provided. --
973
+ # (http://purl.obolibrary.org/obo/CDAO_0000090)
974
+ def self.DiscreteCharLikelihoodLengthType
975
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000090')
976
+ end
977
+
978
+ # -- No comment or description provided. --
979
+ # (http://purl.obolibrary.org/obo/CDAO_0000091)
980
+ def self.CharacterStateDomain
981
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000091')
982
+ end
983
+
984
+ # -- No comment or description provided. --
985
+ # (http://purl.obolibrary.org/obo/CDAO_0000092)
986
+ def self.CoordinateList
987
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000092')
988
+ end
989
+
990
+ # -- No comment or description provided. --
991
+ # (http://purl.obolibrary.org/obo/CDAO_0000093)
992
+ def self.GammaDistribution
993
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000093')
994
+ end
995
+
996
+ # -- No comment or description provided. --
997
+ # (http://purl.obolibrary.org/obo/CDAO_0000094)
998
+ def self.DesoxiRibonucleotideResidueCharacter
999
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000094')
1000
+ end
1001
+
1002
+ # -- No comment or description provided. --
1003
+ # (http://purl.obolibrary.org/obo/CDAO_0000095)
1004
+ def self.CoordinateRange
1005
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000095')
1006
+ end
1007
+
1008
+ # -- No comment or description provided. --
1009
+ # (http://purl.obolibrary.org/obo/CDAO_0000096)
1010
+ def self.ReticulateEvolution
1011
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000096')
1012
+ end
1013
+
1014
+ # -- No comment or description provided. --
1015
+ # (http://purl.obolibrary.org/obo/CDAO_0000097)
1016
+ def self.hereditaryChange
1017
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000097')
1018
+ end
1019
+
1020
+ # -- No comment or description provided. --
1021
+ # (http://purl.obolibrary.org/obo/CDAO_0000098)
1022
+ def self.CharacterStateDatum
1023
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000098')
1024
+ end
1025
+
1026
+ # -- No comment or description provided. --
1027
+ # (http://purl.obolibrary.org/obo/CDAO_0000099)
1028
+ def self.Edge
1029
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000099')
1030
+ end
1031
+
1032
+ # -- No comment or description provided. --
1033
+ # (http://purl.obolibrary.org/obo/CDAO_0000100)
1034
+ def self.DiscreteCharacterLengthType
1035
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000100')
1036
+ end
1037
+
1038
+ # -- No comment or description provided. --
1039
+ # (http://purl.obolibrary.org/obo/CDAO_0000101)
1040
+ def self.EdgeAnnotation
1041
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000101')
1042
+ end
1043
+
1044
+ # -- No comment or description provided. --
1045
+ # (http://purl.obolibrary.org/obo/CDAO_0000102)
1046
+ def self.FullyResolvedRootedTree
1047
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000102')
1048
+ end
1049
+
1050
+ # -- No comment or description provided. --
1051
+ # (http://purl.obolibrary.org/obo/CDAO_0000103)
1052
+ def self.GrafenLengthType
1053
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000103')
1054
+ end
1055
+
1056
+ # -- No comment or description provided. --
1057
+ # (http://purl.obolibrary.org/obo/CDAO_0000104)
1058
+ def self.CoordinateSystem
1059
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000104')
1060
+ end
1061
+
1062
+ # -- No comment or description provided. --
1063
+ # (http://purl.obolibrary.org/obo/CDAO_0000105)
1064
+ def self.GenBankDataMatrix
1065
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000105')
1066
+ end
1067
+
1068
+ # -- No comment or description provided. --
1069
+ # (http://purl.obolibrary.org/obo/CDAO_0000107)
1070
+ def self.DataMatrixFormat
1071
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000107')
1072
+ end
1073
+
1074
+ # -- No comment or description provided. --
1075
+ # (http://purl.obolibrary.org/obo/CDAO_0000108)
1076
+ def self.TerminalNode
1077
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000108')
1078
+ end
1079
+
1080
+ # -- No comment or description provided. --
1081
+ # (http://purl.obolibrary.org/obo/CDAO_0000109)
1082
+ def self.RibonucleotideResidueCharacter
1083
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000109')
1084
+ end
1085
+
1086
+ # -- No comment or description provided. --
1087
+ # (http://purl.obolibrary.org/obo/CDAO_0000110)
1088
+ def self.Tree
1089
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000110')
1090
+ end
1091
+
1092
+ # -- No comment or description provided. --
1093
+ # (http://purl.obolibrary.org/obo/CDAO_0000111)
1094
+ def self.CategoricalCharacter
1095
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000111')
1096
+ end
1097
+
1098
+ # -- No comment or description provided. --
1099
+ # (http://purl.obolibrary.org/obo/CDAO_0000112)
1100
+ def self.AminoAcidResidueStateDatum
1101
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000112')
1102
+ end
1103
+
1104
+ # -- No comment or description provided. --
1105
+ # (http://purl.obolibrary.org/obo/CDAO_0000113)
1106
+ def self.PHYLIPDataMatrix
1107
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000113')
1108
+ end
1109
+
1110
+ # -- No comment or description provided. --
1111
+ # (http://purl.obolibrary.org/obo/CDAO_0000114)
1112
+ def self.ContinuousCharLikelihoodLengthType
1113
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000114')
1114
+ end
1115
+
1116
+ # -- No comment or description provided. --
1117
+ # (http://purl.obolibrary.org/obo/CDAO_0000115)
1118
+ def self.MolecularCharacter
1119
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000115')
1120
+ end
1121
+
1122
+ # -- No comment or description provided. --
1123
+ # (http://purl.obolibrary.org/obo/CDAO_0000116)
1124
+ def self.hereditaryPersistance
1125
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000116')
1126
+ end
1127
+
1128
+ # -- No comment or description provided. --
1129
+ # (http://purl.obolibrary.org/obo/CDAO_0000117)
1130
+ def self.SetOfCharacters
1131
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000117')
1132
+ end
1133
+
1134
+ # -- No comment or description provided. --
1135
+ # (http://purl.obolibrary.org/obo/CDAO_0000118)
1136
+ def self.SetOfThings
1137
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000118')
1138
+ end
1139
+
1140
+ # -- No comment or description provided. --
1141
+ # (http://purl.obolibrary.org/obo/CDAO_0000120)
1142
+ def self.Sequence
1143
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000120')
1144
+ end
1145
+
1146
+ # -- No comment or description provided. --
1147
+ # (http://purl.obolibrary.org/obo/CDAO_0000121)
1148
+ def self.speciation
1149
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000121')
1150
+ end
1151
+
1152
+ # -- No comment or description provided. --
1153
+ # (http://purl.obolibrary.org/obo/CDAO_0000122)
1154
+ def self.cladogenesis
1155
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000122')
1156
+ end
1157
+
1158
+ # -- No comment or description provided. --
1159
+ # (http://purl.obolibrary.org/obo/CDAO_0000124)
1160
+ def self.Bifurcation
1161
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000124')
1162
+ end
1163
+
1164
+ # -- No comment or description provided. --
1165
+ # (http://purl.obolibrary.org/obo/CDAO_0000125)
1166
+ def self.DiscreteCharBayesianLengthType
1167
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000125')
1168
+ end
1169
+
1170
+ # -- No comment or description provided. --
1171
+ # (http://purl.obolibrary.org/obo/CDAO_0000126)
1172
+ def self.TaxonomicLink
1173
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000126')
1174
+ end
1175
+
1176
+ # -- No comment or description provided. --
1177
+ # (http://purl.obolibrary.org/obo/CDAO_0000127)
1178
+ def self.MonophyleticGroup
1179
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000127')
1180
+ end
1181
+
1182
+ # -- No comment or description provided. --
1183
+ # (http://purl.obolibrary.org/obo/CDAO_0000128)
1184
+ def self.molecularRecombination
1185
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000128')
1186
+ end
1187
+
1188
+ # -- No comment or description provided. --
1189
+ # (http://purl.obolibrary.org/obo/CDAO_0000129)
1190
+ def self.HolophyleticGroup
1191
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000129')
1192
+ end
1193
+
1194
+ # -- No comment or description provided. --
1195
+ # (http://purl.obolibrary.org/obo/CDAO_0000130)
1196
+ def self.FullyResolvedTree
1197
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000130')
1198
+ end
1199
+
1200
+ # -- No comment or description provided. --
1201
+ # (http://purl.obolibrary.org/obo/CDAO_0000131)
1202
+ def self.AminoAcidResidueCharacter
1203
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000131')
1204
+ end
1205
+
1206
+ # -- No comment or description provided. --
1207
+ # (http://purl.obolibrary.org/obo/CDAO_0000132)
1208
+ def self.recombination
1209
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000132')
1210
+ end
1211
+
1212
+ # -- No comment or description provided. --
1213
+ # (http://purl.obolibrary.org/obo/CDAO_0000133)
1214
+ def self.DesoxiRibonucleotideResidue
1215
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000133')
1216
+ end
1217
+
1218
+ # -- No comment or description provided. --
1219
+ # (http://purl.obolibrary.org/obo/CDAO_0000134)
1220
+ def self.RootedSubtree
1221
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000134')
1222
+ end
1223
+
1224
+ # -- No comment or description provided. --
1225
+ # (http://purl.obolibrary.org/obo/CDAO_0000136)
1226
+ def self.CompoundStateDatum
1227
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000136')
1228
+ end
1229
+
1230
+ # -- No comment or description provided. --
1231
+ # (http://purl.obolibrary.org/obo/CDAO_0000137)
1232
+ def self.GapCost
1233
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000137')
1234
+ end
1235
+
1236
+ # -- No comment or description provided. --
1237
+ # (http://purl.obolibrary.org/obo/CDAO_0000138)
1238
+ def self.TU
1239
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000138')
1240
+ end
1241
+
1242
+ # -- No comment or description provided. --
1243
+ # (http://purl.obolibrary.org/obo/CDAO_0000139)
1244
+ def self.DirectedEdge
1245
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000139')
1246
+ end
1247
+
1248
+ # -- No comment or description provided. --
1249
+ # (http://purl.obolibrary.org/obo/CDAO_0000140)
1250
+ def self.Node
1251
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000140')
1252
+ end
1253
+
1254
+ # -- No comment or description provided. --
1255
+ # (http://purl.obolibrary.org/obo/CDAO_0000141)
1256
+ def self.ContinuousCharDistanceLengthType
1257
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000141')
1258
+ end
1259
+
1260
+ # -- No comment or description provided. --
1261
+ # (http://purl.obolibrary.org/obo/CDAO_0000220)
1262
+ def self.dA
1263
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000220')
1264
+ end
1265
+
1266
+ # -- No comment or description provided. --
1267
+ # (http://purl.obolibrary.org/obo/CDAO_0000221)
1268
+ def self.absent
1269
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000221')
1270
+ end
1271
+
1272
+ # -- No comment or description provided. --
1273
+ # (http://purl.obolibrary.org/obo/CDAO_0000222)
1274
+ def self.unknown
1275
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000222')
1276
+ end
1277
+
1278
+ # -- No comment or description provided. --
1279
+ # (http://purl.obolibrary.org/obo/CDAO_0000223)
1280
+ def self.gap
1281
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000223')
1282
+ end
1283
+
1284
+ # -- No comment or description provided. --
1285
+ # (http://purl.obolibrary.org/obo/CDAO_0000224)
1286
+ def self.dG
1287
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000224')
1288
+ end
1289
+
1290
+ # -- No comment or description provided. --
1291
+ # (http://purl.obolibrary.org/obo/CDAO_0000225)
1292
+ def self.rU
1293
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000225')
1294
+ end
1295
+
1296
+ # -- No comment or description provided. --
1297
+ # (http://purl.obolibrary.org/obo/CDAO_0000226)
1298
+ def self.dC
1299
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000226')
1300
+ end
1301
+
1302
+ # -- No comment or description provided. --
1303
+ # (http://purl.obolibrary.org/obo/CDAO_0000227)
1304
+ def self.dT
1305
+ return RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000227')
1306
+ end
1307
+
1308
+ # Determines whether the given URI is an object property.
1309
+ #
1310
+ # +uri+:: URI that is tested for being an object property
1311
+ def self.is_object_property?(uri)
1312
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000142') then
1313
+ return true
1314
+ end
1315
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000143') then
1316
+ return true
1317
+ end
1318
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000144') then
1319
+ return true
1320
+ end
1321
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000145') then
1322
+ return true
1323
+ end
1324
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000146') then
1325
+ return true
1326
+ end
1327
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000147') then
1328
+ return true
1329
+ end
1330
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000148') then
1331
+ return true
1332
+ end
1333
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000149') then
1334
+ return true
1335
+ end
1336
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000150') then
1337
+ return true
1338
+ end
1339
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000151') then
1340
+ return true
1341
+ end
1342
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000152') then
1343
+ return true
1344
+ end
1345
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000153') then
1346
+ return true
1347
+ end
1348
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000154') then
1349
+ return true
1350
+ end
1351
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000155') then
1352
+ return true
1353
+ end
1354
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000156') then
1355
+ return true
1356
+ end
1357
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000157') then
1358
+ return true
1359
+ end
1360
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000158') then
1361
+ return true
1362
+ end
1363
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000159') then
1364
+ return true
1365
+ end
1366
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000160') then
1367
+ return true
1368
+ end
1369
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000161') then
1370
+ return true
1371
+ end
1372
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000162') then
1373
+ return true
1374
+ end
1375
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000163') then
1376
+ return true
1377
+ end
1378
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000164') then
1379
+ return true
1380
+ end
1381
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000165') then
1382
+ return true
1383
+ end
1384
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000166') then
1385
+ return true
1386
+ end
1387
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000167') then
1388
+ return true
1389
+ end
1390
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000168') then
1391
+ return true
1392
+ end
1393
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000169') then
1394
+ return true
1395
+ end
1396
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000170') then
1397
+ return true
1398
+ end
1399
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000171') then
1400
+ return true
1401
+ end
1402
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000172') then
1403
+ return true
1404
+ end
1405
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000173') then
1406
+ return true
1407
+ end
1408
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000174') then
1409
+ return true
1410
+ end
1411
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000175') then
1412
+ return true
1413
+ end
1414
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000176') then
1415
+ return true
1416
+ end
1417
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000177') then
1418
+ return true
1419
+ end
1420
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') then
1421
+ return true
1422
+ end
1423
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000179') then
1424
+ return true
1425
+ end
1426
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000180') then
1427
+ return true
1428
+ end
1429
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000181') then
1430
+ return true
1431
+ end
1432
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000182') then
1433
+ return true
1434
+ end
1435
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000183') then
1436
+ return true
1437
+ end
1438
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000184') then
1439
+ return true
1440
+ end
1441
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000185') then
1442
+ return true
1443
+ end
1444
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000186') then
1445
+ return true
1446
+ end
1447
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000187') then
1448
+ return true
1449
+ end
1450
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000188') then
1451
+ return true
1452
+ end
1453
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000189') then
1454
+ return true
1455
+ end
1456
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000190') then
1457
+ return true
1458
+ end
1459
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000191') then
1460
+ return true
1461
+ end
1462
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000192') then
1463
+ return true
1464
+ end
1465
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000193') then
1466
+ return true
1467
+ end
1468
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000194') then
1469
+ return true
1470
+ end
1471
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000195') then
1472
+ return true
1473
+ end
1474
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000196') then
1475
+ return true
1476
+ end
1477
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000197') then
1478
+ return true
1479
+ end
1480
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000198') then
1481
+ return true
1482
+ end
1483
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000199') then
1484
+ return true
1485
+ end
1486
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000200') then
1487
+ return true
1488
+ end
1489
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000201') then
1490
+ return true
1491
+ end
1492
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000202') then
1493
+ return true
1494
+ end
1495
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000203') then
1496
+ return true
1497
+ end
1498
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000204') then
1499
+ return true
1500
+ end
1501
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000205') then
1502
+ return true
1503
+ end
1504
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000206') then
1505
+ return true
1506
+ end
1507
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000207') then
1508
+ return true
1509
+ end
1510
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000208') then
1511
+ return true
1512
+ end
1513
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000209') then
1514
+ return true
1515
+ end
1516
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000210') then
1517
+ return true
1518
+ end
1519
+ return false
1520
+ end
1521
+
1522
+ # Determines whether the given URI is a datatype property.
1523
+ #
1524
+ # +uri+:: URI that is tested for being a datatype property
1525
+ def self.is_datatype_property?(uri)
1526
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000211') then
1527
+ return true
1528
+ end
1529
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000212') then
1530
+ return true
1531
+ end
1532
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000213') then
1533
+ return true
1534
+ end
1535
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000214') then
1536
+ return true
1537
+ end
1538
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000215') then
1539
+ return true
1540
+ end
1541
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000216') then
1542
+ return true
1543
+ end
1544
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000217') then
1545
+ return true
1546
+ end
1547
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000218') then
1548
+ return true
1549
+ end
1550
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000219') then
1551
+ return true
1552
+ end
1553
+ return false
1554
+ end
1555
+
1556
+ # Determines whether the given URI is a class.
1557
+ #
1558
+ # +uri+:: URI that is tested for being a class
1559
+ def self.is_class?(uri)
1560
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000002') then
1561
+ return true
1562
+ end
1563
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000003') then
1564
+ return true
1565
+ end
1566
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000004') then
1567
+ return true
1568
+ end
1569
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000005') then
1570
+ return true
1571
+ end
1572
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000006') then
1573
+ return true
1574
+ end
1575
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000007') then
1576
+ return true
1577
+ end
1578
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000008') then
1579
+ return true
1580
+ end
1581
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000009') then
1582
+ return true
1583
+ end
1584
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000010') then
1585
+ return true
1586
+ end
1587
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000011') then
1588
+ return true
1589
+ end
1590
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000012') then
1591
+ return true
1592
+ end
1593
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000013') then
1594
+ return true
1595
+ end
1596
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000014') then
1597
+ return true
1598
+ end
1599
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000015') then
1600
+ return true
1601
+ end
1602
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000016') then
1603
+ return true
1604
+ end
1605
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000017') then
1606
+ return true
1607
+ end
1608
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000018') then
1609
+ return true
1610
+ end
1611
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000019') then
1612
+ return true
1613
+ end
1614
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000020') then
1615
+ return true
1616
+ end
1617
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000021') then
1618
+ return true
1619
+ end
1620
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000022') then
1621
+ return true
1622
+ end
1623
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000023') then
1624
+ return true
1625
+ end
1626
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000024') then
1627
+ return true
1628
+ end
1629
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000025') then
1630
+ return true
1631
+ end
1632
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000026') then
1633
+ return true
1634
+ end
1635
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000027') then
1636
+ return true
1637
+ end
1638
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000029') then
1639
+ return true
1640
+ end
1641
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000030') then
1642
+ return true
1643
+ end
1644
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000031') then
1645
+ return true
1646
+ end
1647
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000032') then
1648
+ return true
1649
+ end
1650
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000033') then
1651
+ return true
1652
+ end
1653
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000034') then
1654
+ return true
1655
+ end
1656
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000035') then
1657
+ return true
1658
+ end
1659
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000039') then
1660
+ return true
1661
+ end
1662
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000040') then
1663
+ return true
1664
+ end
1665
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000041') then
1666
+ return true
1667
+ end
1668
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000042') then
1669
+ return true
1670
+ end
1671
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000043') then
1672
+ return true
1673
+ end
1674
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000044') then
1675
+ return true
1676
+ end
1677
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000045') then
1678
+ return true
1679
+ end
1680
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000046') then
1681
+ return true
1682
+ end
1683
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000047') then
1684
+ return true
1685
+ end
1686
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000048') then
1687
+ return true
1688
+ end
1689
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000049') then
1690
+ return true
1691
+ end
1692
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000050') then
1693
+ return true
1694
+ end
1695
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000051') then
1696
+ return true
1697
+ end
1698
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000052') then
1699
+ return true
1700
+ end
1701
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000053') then
1702
+ return true
1703
+ end
1704
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000055') then
1705
+ return true
1706
+ end
1707
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000056') then
1708
+ return true
1709
+ end
1710
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000057') then
1711
+ return true
1712
+ end
1713
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000058') then
1714
+ return true
1715
+ end
1716
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000059') then
1717
+ return true
1718
+ end
1719
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000060') then
1720
+ return true
1721
+ end
1722
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000061') then
1723
+ return true
1724
+ end
1725
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000062') then
1726
+ return true
1727
+ end
1728
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000063') then
1729
+ return true
1730
+ end
1731
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000064') then
1732
+ return true
1733
+ end
1734
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000065') then
1735
+ return true
1736
+ end
1737
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000066') then
1738
+ return true
1739
+ end
1740
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000067') then
1741
+ return true
1742
+ end
1743
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000068') then
1744
+ return true
1745
+ end
1746
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000069') then
1747
+ return true
1748
+ end
1749
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000070') then
1750
+ return true
1751
+ end
1752
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000071') then
1753
+ return true
1754
+ end
1755
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000072') then
1756
+ return true
1757
+ end
1758
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000073') then
1759
+ return true
1760
+ end
1761
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000074') then
1762
+ return true
1763
+ end
1764
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000075') then
1765
+ return true
1766
+ end
1767
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000076') then
1768
+ return true
1769
+ end
1770
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000077') then
1771
+ return true
1772
+ end
1773
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000078') then
1774
+ return true
1775
+ end
1776
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000079') then
1777
+ return true
1778
+ end
1779
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000080') then
1780
+ return true
1781
+ end
1782
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000081') then
1783
+ return true
1784
+ end
1785
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000082') then
1786
+ return true
1787
+ end
1788
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000083') then
1789
+ return true
1790
+ end
1791
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000084') then
1792
+ return true
1793
+ end
1794
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000085') then
1795
+ return true
1796
+ end
1797
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000086') then
1798
+ return true
1799
+ end
1800
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000087') then
1801
+ return true
1802
+ end
1803
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000088') then
1804
+ return true
1805
+ end
1806
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000089') then
1807
+ return true
1808
+ end
1809
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000090') then
1810
+ return true
1811
+ end
1812
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000091') then
1813
+ return true
1814
+ end
1815
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000092') then
1816
+ return true
1817
+ end
1818
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000093') then
1819
+ return true
1820
+ end
1821
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000094') then
1822
+ return true
1823
+ end
1824
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000095') then
1825
+ return true
1826
+ end
1827
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000096') then
1828
+ return true
1829
+ end
1830
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000097') then
1831
+ return true
1832
+ end
1833
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000098') then
1834
+ return true
1835
+ end
1836
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000099') then
1837
+ return true
1838
+ end
1839
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000100') then
1840
+ return true
1841
+ end
1842
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000101') then
1843
+ return true
1844
+ end
1845
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000102') then
1846
+ return true
1847
+ end
1848
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000103') then
1849
+ return true
1850
+ end
1851
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000104') then
1852
+ return true
1853
+ end
1854
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000105') then
1855
+ return true
1856
+ end
1857
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000107') then
1858
+ return true
1859
+ end
1860
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000108') then
1861
+ return true
1862
+ end
1863
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000109') then
1864
+ return true
1865
+ end
1866
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000110') then
1867
+ return true
1868
+ end
1869
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000111') then
1870
+ return true
1871
+ end
1872
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000112') then
1873
+ return true
1874
+ end
1875
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000113') then
1876
+ return true
1877
+ end
1878
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000114') then
1879
+ return true
1880
+ end
1881
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000115') then
1882
+ return true
1883
+ end
1884
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000116') then
1885
+ return true
1886
+ end
1887
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000117') then
1888
+ return true
1889
+ end
1890
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000118') then
1891
+ return true
1892
+ end
1893
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000120') then
1894
+ return true
1895
+ end
1896
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000121') then
1897
+ return true
1898
+ end
1899
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000122') then
1900
+ return true
1901
+ end
1902
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000124') then
1903
+ return true
1904
+ end
1905
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000125') then
1906
+ return true
1907
+ end
1908
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000126') then
1909
+ return true
1910
+ end
1911
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000127') then
1912
+ return true
1913
+ end
1914
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000128') then
1915
+ return true
1916
+ end
1917
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000129') then
1918
+ return true
1919
+ end
1920
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000130') then
1921
+ return true
1922
+ end
1923
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000131') then
1924
+ return true
1925
+ end
1926
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000132') then
1927
+ return true
1928
+ end
1929
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000133') then
1930
+ return true
1931
+ end
1932
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000134') then
1933
+ return true
1934
+ end
1935
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000136') then
1936
+ return true
1937
+ end
1938
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000137') then
1939
+ return true
1940
+ end
1941
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000138') then
1942
+ return true
1943
+ end
1944
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000139') then
1945
+ return true
1946
+ end
1947
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000140') then
1948
+ return true
1949
+ end
1950
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000141') then
1951
+ return true
1952
+ end
1953
+ return false
1954
+ end
1955
+
1956
+ # Determines whether the given URI is a named individual.
1957
+ #
1958
+ # +uri+:: URI that is tested for being a named individual
1959
+ def self.is_named_individual?(uri)
1960
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000220') then
1961
+ return true
1962
+ end
1963
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000221') then
1964
+ return true
1965
+ end
1966
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000222') then
1967
+ return true
1968
+ end
1969
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000223') then
1970
+ return true
1971
+ end
1972
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000224') then
1973
+ return true
1974
+ end
1975
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000225') then
1976
+ return true
1977
+ end
1978
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000226') then
1979
+ return true
1980
+ end
1981
+ if uri == RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000227') then
1982
+ return true
1983
+ end
1984
+ return false
1985
+ end
1986
+
1987
+ # Returns only those URIs that fall under a designated parent URI.
1988
+ #
1989
+ # +uris+:: Set of URIs that are tested whether they have the given parent URI.
1990
+ # +parent+:: Parent URI.
1991
+ def self.with_parent(uris, parent)
1992
+ return uris.select { |uri| has_parent?(uri, parent) }
1993
+ end
1994
+
1995
+ # Recursively tries to determine the parent for a given URI.
1996
+ #
1997
+ # +uri+:: URI that is tested for whether it has the given parent URI.
1998
+ # +parent+:: Parent URI.
1999
+ def self.has_parent?(uri, parent)
2000
+ if @@parent_properties.has_key?(uri) then
2001
+ if @@parent_properties[uri] == parent then
2002
+ return true
2003
+ end
2004
+ return has_parent?(@@parent_properties[uri], parent)
2005
+ end
2006
+ return false
2007
+ end
2008
+
2009
+ private
2010
+ @@parent_properties = { RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000142') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000143') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000146') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000144') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000145') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000184') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000146') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000190') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000147') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000190') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000148') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000149') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000174') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000150') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000151') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000152') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000205') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000153') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000154') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000183') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000156') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000184') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000158') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000206') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000159') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000182') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000162') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000166') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000205') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000168') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000206') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000170') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000183') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000171') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000173') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000205') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000174') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000175') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000184') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000176') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000177') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000146') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000179') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000144') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000180') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000205') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000182') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000183') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000153') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000184') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000185') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000182') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000186') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000182') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000188') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000161') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000189') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000184') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000191') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000190') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000192') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000190') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000193') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000195') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000206') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000197') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000198') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000199') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000161') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000200') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000190') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000201') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000162') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000202') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000203') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000190') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000204') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000205') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000190') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000206') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000183') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000207') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000153') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000208') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000178') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000209') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000162') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000210') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000182') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000213') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000215') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000218') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000215') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000002') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000050') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000003') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000022') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000005') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000074') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000007') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000040') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000008') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000089') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000009') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000063') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000010') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000009') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000011') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000074') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000013') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000020') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000014') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000044') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000015') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000039') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000016') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000070') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000017') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000110') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000018') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000110') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000019') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000098') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000020') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000007') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000021') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000020') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000023') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000017') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000027') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000088') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000032') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000025') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000033') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000026') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000034') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000039') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000035') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000009') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000039') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000091') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000040') => 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RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000074') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000069') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000074') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000072') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000006') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000073') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000110') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000074') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000044') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000075') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000111') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000076') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000034') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000077') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000064') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000079') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000074') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000081') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000074') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000082') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000063') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000083') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000100') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000085') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000088') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000087') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000041') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000088') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000110') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000089') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000098') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000090') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000100') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000092') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000022') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000093') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000020') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000095') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000022') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000096') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000006') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000100') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000063') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000103') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000063') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000104') => RDF::URI.new('http://www.w3.org/2002/07/owl#Thing') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000105') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000107') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000107') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000025') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000108') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000140') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000110') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000006') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000111') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000071') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000112') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000050') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000113') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000107') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000114') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000009') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000115') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000111') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000121') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000064') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000122') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000064') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000125') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000100') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000126') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000066') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000127') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000006') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000128') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000132') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000129') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000127') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000130') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000110') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000132') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000087') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000133') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000034') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000134') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000070') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000136') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000089') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000137') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000007') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000138') => RDF::URI.new('http://www.w3.org/2002/07/owl#Thing') , RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000141') => RDF::URI.new('http://purl.obolibrary.org/obo/CDAO_0000009') }
2011
+
2012
+ end
2013
+
2014
+ end