snappy 3.1.1__cp39-cp39-win_amd64.whl → 3.2__cp39-cp39-win_amd64.whl

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Files changed (476) hide show
  1. snappy/CyOpenGL.cp39-win_amd64.pyd +0 -0
  2. snappy/SnapPy.cp39-win_amd64.pyd +0 -0
  3. snappy/SnapPyHP.cp39-win_amd64.pyd +0 -0
  4. snappy/__init__.py +299 -402
  5. snappy/app.py +70 -20
  6. snappy/browser.py +18 -17
  7. snappy/canonical.py +249 -0
  8. snappy/{verify/cusp_shapes.py → cusps/__init__.py} +8 -18
  9. snappy/cusps/cusp_area_matrix.py +101 -0
  10. snappy/{verify/cusp_areas.py → cusps/cusp_areas_from_matrix.py} +23 -39
  11. snappy/cusps/maximal_cusp_area_matrix.py +136 -0
  12. snappy/cusps/test.py +21 -0
  13. snappy/cusps/trig_cusp_area_matrix.py +63 -0
  14. snappy/database.py +10 -9
  15. snappy/decorated_isosig.py +337 -114
  16. snappy/dev/extended_ptolemy/complexVolumesClosed.py +40 -7
  17. snappy/dev/extended_ptolemy/extended.py +3 -3
  18. snappy/dev/extended_ptolemy/phc_wrapper.py +10 -10
  19. snappy/dev/vericlosed/oneVertexTruncatedComplex.py +1 -1
  20. snappy/doc/_images/m004_paper_plane_on_systole.jpg +0 -0
  21. snappy/doc/_images/m125_paper_plane.jpg +0 -0
  22. snappy/doc/_images/o9_00000_systole_paper_plane.jpg +0 -0
  23. snappy/doc/_images/o9_00000_systole_paper_plane_closer.jpg +0 -0
  24. snappy/doc/_sources/additional_classes.rst.txt +40 -40
  25. snappy/doc/_sources/bugs.rst.txt +14 -14
  26. snappy/doc/_sources/censuses.rst.txt +51 -51
  27. snappy/doc/_sources/credits.rst.txt +75 -75
  28. snappy/doc/_sources/development.rst.txt +259 -239
  29. snappy/doc/_sources/index.rst.txt +182 -115
  30. snappy/doc/_sources/installing.rst.txt +247 -264
  31. snappy/doc/_sources/manifold.rst.txt +6 -6
  32. snappy/doc/_sources/manifoldhp.rst.txt +46 -46
  33. snappy/doc/_sources/news.rst.txt +355 -283
  34. snappy/doc/_sources/other.rst.txt +25 -25
  35. snappy/doc/_sources/platonic_census.rst.txt +20 -20
  36. snappy/doc/_sources/plink.rst.txt +102 -102
  37. snappy/doc/_sources/ptolemy.rst.txt +66 -66
  38. snappy/doc/_sources/ptolemy_classes.rst.txt +42 -42
  39. snappy/doc/_sources/ptolemy_examples1.rst.txt +298 -297
  40. snappy/doc/_sources/ptolemy_examples2.rst.txt +363 -363
  41. snappy/doc/_sources/ptolemy_examples3.rst.txt +301 -301
  42. snappy/doc/_sources/ptolemy_examples4.rst.txt +61 -61
  43. snappy/doc/_sources/ptolemy_prelim.rst.txt +105 -105
  44. snappy/doc/_sources/screenshots.rst.txt +21 -21
  45. snappy/doc/_sources/snap.rst.txt +87 -87
  46. snappy/doc/_sources/snappy.rst.txt +28 -28
  47. snappy/doc/_sources/spherogram.rst.txt +103 -103
  48. snappy/doc/_sources/todo.rst.txt +47 -47
  49. snappy/doc/_sources/triangulation.rst.txt +11 -11
  50. snappy/doc/_sources/tutorial.rst.txt +49 -49
  51. snappy/doc/_sources/verify.rst.txt +210 -150
  52. snappy/doc/_sources/verify_internals.rst.txt +79 -90
  53. snappy/doc/_static/basic.css +924 -902
  54. snappy/doc/_static/css/badge_only.css +1 -1
  55. snappy/doc/_static/css/theme.css +1 -1
  56. snappy/doc/_static/doctools.js +1 -1
  57. snappy/doc/_static/documentation_options.js +12 -13
  58. snappy/doc/_static/fonts/Lato/lato-bold.eot +0 -0
  59. snappy/doc/_static/fonts/Lato/lato-bold.ttf +0 -0
  60. snappy/doc/_static/fonts/Lato/lato-bold.woff +0 -0
  61. snappy/doc/_static/fonts/Lato/lato-bold.woff2 +0 -0
  62. snappy/doc/_static/fonts/Lato/lato-bolditalic.eot +0 -0
  63. snappy/doc/_static/fonts/Lato/lato-bolditalic.ttf +0 -0
  64. snappy/doc/_static/fonts/Lato/lato-bolditalic.woff +0 -0
  65. snappy/doc/_static/fonts/Lato/lato-bolditalic.woff2 +0 -0
  66. snappy/doc/_static/fonts/Lato/lato-italic.eot +0 -0
  67. snappy/doc/_static/fonts/Lato/lato-italic.ttf +0 -0
  68. snappy/doc/_static/fonts/Lato/lato-italic.woff +0 -0
  69. snappy/doc/_static/fonts/Lato/lato-italic.woff2 +0 -0
  70. snappy/doc/_static/fonts/Lato/lato-regular.eot +0 -0
  71. snappy/doc/_static/fonts/Lato/lato-regular.ttf +0 -0
  72. snappy/doc/_static/fonts/Lato/lato-regular.woff +0 -0
  73. snappy/doc/_static/fonts/Lato/lato-regular.woff2 +0 -0
  74. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.eot +0 -0
  75. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.ttf +0 -0
  76. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.woff +0 -0
  77. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.woff2 +0 -0
  78. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.eot +0 -0
  79. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.ttf +0 -0
  80. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff +0 -0
  81. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff2 +0 -0
  82. snappy/doc/_static/js/versions.js +228 -0
  83. snappy/doc/_static/language_data.js +199 -199
  84. snappy/doc/_static/pygments.css +74 -73
  85. snappy/doc/_static/searchtools.js +125 -71
  86. snappy/doc/_static/snappy_furo.css +33 -33
  87. snappy/doc/_static/snappy_sphinx_rtd_theme.css +42 -42
  88. snappy/doc/_static/sphinx_highlight.js +13 -3
  89. snappy/doc/additional_classes.html +1499 -1330
  90. snappy/doc/bugs.html +131 -134
  91. snappy/doc/censuses.html +426 -445
  92. snappy/doc/credits.html +180 -183
  93. snappy/doc/development.html +383 -363
  94. snappy/doc/genindex.html +1330 -1409
  95. snappy/doc/index.html +261 -206
  96. snappy/doc/installing.html +345 -363
  97. snappy/doc/manifold.html +3451 -2839
  98. snappy/doc/manifoldhp.html +179 -182
  99. snappy/doc/news.html +387 -329
  100. snappy/doc/objects.inv +0 -0
  101. snappy/doc/other.html +160 -162
  102. snappy/doc/platonic_census.html +374 -377
  103. snappy/doc/plink.html +209 -212
  104. snappy/doc/ptolemy.html +253 -255
  105. snappy/doc/ptolemy_classes.html +1143 -1146
  106. snappy/doc/ptolemy_examples1.html +408 -410
  107. snappy/doc/ptolemy_examples2.html +470 -473
  108. snappy/doc/ptolemy_examples3.html +413 -416
  109. snappy/doc/ptolemy_examples4.html +194 -197
  110. snappy/doc/ptolemy_prelim.html +247 -250
  111. snappy/doc/py-modindex.html +164 -167
  112. snappy/doc/screenshots.html +140 -142
  113. snappy/doc/search.html +134 -137
  114. snappy/doc/searchindex.js +1 -1
  115. snappy/doc/snap.html +201 -204
  116. snappy/doc/snappy.html +180 -182
  117. snappy/doc/spherogram.html +1210 -1213
  118. snappy/doc/todo.html +165 -168
  119. snappy/doc/triangulation.html +1583 -1474
  120. snappy/doc/tutorial.html +158 -161
  121. snappy/doc/verify.html +329 -275
  122. snappy/doc/verify_internals.html +1234 -1691
  123. snappy/drilling/__init__.py +153 -235
  124. snappy/drilling/barycentric.py +103 -0
  125. snappy/drilling/constants.py +0 -2
  126. snappy/drilling/crush.py +56 -130
  127. snappy/drilling/cusps.py +12 -6
  128. snappy/drilling/debug.py +2 -1
  129. snappy/drilling/exceptions.py +7 -40
  130. snappy/drilling/moves.py +302 -243
  131. snappy/drilling/perturb.py +63 -37
  132. snappy/drilling/shorten.py +36 -0
  133. snappy/drilling/subdivide.py +0 -5
  134. snappy/drilling/test.py +23 -0
  135. snappy/drilling/test_cases.py +126 -0
  136. snappy/drilling/tracing.py +9 -37
  137. snappy/exceptions.py +18 -5
  138. snappy/exterior_to_link/barycentric_geometry.py +2 -4
  139. snappy/exterior_to_link/main.py +8 -7
  140. snappy/exterior_to_link/mcomplex_with_link.py +2 -2
  141. snappy/exterior_to_link/rational_linear_algebra.py +1 -1
  142. snappy/exterior_to_link/rational_linear_algebra_wrapped.py +1 -1
  143. snappy/exterior_to_link/test.py +21 -33
  144. snappy/geometric_structure/__init__.py +212 -0
  145. snappy/geometric_structure/cusp_neighborhood/__init__.py +3 -0
  146. snappy/geometric_structure/cusp_neighborhood/complex_cusp_cross_section.py +697 -0
  147. snappy/geometric_structure/cusp_neighborhood/cusp_cross_section_base.py +484 -0
  148. snappy/geometric_structure/cusp_neighborhood/exceptions.py +42 -0
  149. snappy/geometric_structure/cusp_neighborhood/real_cusp_cross_section.py +298 -0
  150. snappy/geometric_structure/cusp_neighborhood/tiles_for_cusp_neighborhood.py +159 -0
  151. snappy/geometric_structure/cusp_neighborhood/vertices.py +32 -0
  152. snappy/geometric_structure/geodesic/__init__.py +0 -0
  153. snappy/geometric_structure/geodesic/add_core_curves.py +152 -0
  154. snappy/geometric_structure/geodesic/avoid_core_curves.py +369 -0
  155. snappy/geometric_structure/geodesic/canonical_keys.py +52 -0
  156. snappy/geometric_structure/geodesic/check_away_from_core_curve.py +60 -0
  157. snappy/geometric_structure/geodesic/constants.py +6 -0
  158. snappy/geometric_structure/geodesic/exceptions.py +22 -0
  159. snappy/{drilling → geometric_structure/geodesic}/fixed_points.py +34 -9
  160. snappy/{drilling/geodesic_info.py → geometric_structure/geodesic/geodesic_start_point_info.py} +139 -180
  161. snappy/geometric_structure/geodesic/graph_trace_helper.py +67 -0
  162. snappy/geometric_structure/geodesic/line.py +30 -0
  163. snappy/geometric_structure/geodesic/multiplicity.py +127 -0
  164. snappy/geometric_structure/geodesic/tiles_for_geodesic.py +101 -0
  165. snappy/geometric_structure/test.py +22 -0
  166. snappy/gui.py +23 -13
  167. snappy/horoviewer.py +7 -7
  168. snappy/hyperboloid/__init__.py +96 -31
  169. snappy/hyperboloid/distances.py +245 -0
  170. snappy/hyperboloid/horoball.py +19 -0
  171. snappy/hyperboloid/line.py +35 -0
  172. snappy/hyperboloid/point.py +9 -0
  173. snappy/hyperboloid/triangle.py +29 -0
  174. snappy/isometry_signature.py +382 -0
  175. snappy/len_spec/__init__.py +596 -0
  176. snappy/len_spec/geodesic_info.py +110 -0
  177. snappy/len_spec/geodesic_key_info_dict.py +117 -0
  178. snappy/len_spec/geodesic_piece.py +143 -0
  179. snappy/len_spec/geometric_structure.py +182 -0
  180. snappy/len_spec/geometry.py +80 -0
  181. snappy/len_spec/length_spectrum_geodesic_info.py +170 -0
  182. snappy/len_spec/spine.py +206 -0
  183. snappy/len_spec/test.py +24 -0
  184. snappy/len_spec/test_cases.py +69 -0
  185. snappy/len_spec/tile.py +275 -0
  186. snappy/len_spec/word.py +86 -0
  187. snappy/math_basics.py +39 -13
  188. snappy/matrix.py +52 -9
  189. snappy/number.py +12 -6
  190. snappy/numeric_output_checker.py +2 -3
  191. snappy/pari.py +8 -4
  192. snappy/phone_home.py +2 -1
  193. snappy/polyviewer.py +8 -8
  194. snappy/ptolemy/__init__.py +1 -1
  195. snappy/ptolemy/component.py +2 -2
  196. snappy/ptolemy/coordinates.py +25 -25
  197. snappy/ptolemy/findLoops.py +9 -9
  198. snappy/ptolemy/manifoldMethods.py +27 -29
  199. snappy/ptolemy/polynomial.py +50 -57
  200. snappy/ptolemy/processFileBase.py +60 -0
  201. snappy/ptolemy/ptolemyVariety.py +109 -41
  202. snappy/ptolemy/reginaWrapper.py +4 -4
  203. snappy/ptolemy/rur.py +1 -1
  204. snappy/ptolemy/solutionsToPrimeIdealGroebnerBasis.py +9 -9
  205. snappy/ptolemy/test.py +99 -54
  206. snappy/ptolemy/utilities.py +1 -1
  207. snappy/raytracing/__init__.py +64 -0
  208. snappy/raytracing/additional_horospheres.py +64 -0
  209. snappy/raytracing/additional_len_spec_choices.py +63 -0
  210. snappy/raytracing/cohomology_fractal.py +0 -3
  211. snappy/raytracing/eyeball.py +123 -0
  212. snappy/raytracing/finite_raytracing_data.py +17 -17
  213. snappy/raytracing/finite_viewer.py +15 -15
  214. snappy/raytracing/geodesic_tube_info.py +93 -63
  215. snappy/raytracing/geodesics.py +94 -64
  216. snappy/raytracing/geodesics_window.py +56 -34
  217. snappy/raytracing/gui_utilities.py +21 -6
  218. snappy/raytracing/hyperboloid_navigation.py +29 -4
  219. snappy/raytracing/hyperboloid_utilities.py +73 -73
  220. snappy/raytracing/ideal_raytracing_data.py +121 -91
  221. snappy/raytracing/inside_viewer.py +199 -66
  222. snappy/raytracing/pack.py +22 -0
  223. snappy/raytracing/raytracing_data.py +37 -25
  224. snappy/raytracing/raytracing_view.py +70 -65
  225. snappy/raytracing/shaders/Eye.png +0 -0
  226. snappy/raytracing/shaders/NonGeometric.png +0 -0
  227. snappy/raytracing/shaders/__init__.py +39 -3
  228. snappy/raytracing/shaders/fragment.glsl +451 -133
  229. snappy/raytracing/test.py +29 -0
  230. snappy/raytracing/tooltip.py +146 -0
  231. snappy/raytracing/upper_halfspace_utilities.py +42 -9
  232. snappy/sage_helper.py +67 -134
  233. snappy/settings.py +90 -77
  234. snappy/shell.py +2 -0
  235. snappy/snap/character_varieties.py +2 -2
  236. snappy/snap/find_field.py +4 -3
  237. snappy/snap/fundamental_polyhedron.py +2 -2
  238. snappy/snap/kernel_structures.py +5 -1
  239. snappy/snap/nsagetools.py +9 -8
  240. snappy/snap/peripheral/dual_cellulation.py +4 -3
  241. snappy/snap/peripheral/peripheral.py +2 -2
  242. snappy/snap/peripheral/surface.py +5 -5
  243. snappy/snap/peripheral/test.py +1 -1
  244. snappy/snap/polished_reps.py +8 -8
  245. snappy/snap/slice_obs_HKL.py +16 -14
  246. snappy/snap/t3mlite/arrow.py +3 -3
  247. snappy/snap/t3mlite/edge.py +3 -3
  248. snappy/snap/t3mlite/homology.py +2 -2
  249. snappy/snap/t3mlite/mcomplex.py +3 -3
  250. snappy/snap/t3mlite/simplex.py +12 -0
  251. snappy/snap/t3mlite/spun.py +18 -17
  252. snappy/snap/t3mlite/test_vs_regina.py +4 -4
  253. snappy/snap/test.py +37 -53
  254. snappy/snap/utilities.py +4 -5
  255. snappy/test.py +121 -138
  256. snappy/test_cases.py +263 -0
  257. snappy/testing.py +131 -0
  258. snappy/tiling/__init__.py +2 -0
  259. snappy/tiling/canonical_key_dict.py +59 -0
  260. snappy/tiling/dict_based_set.py +79 -0
  261. snappy/tiling/floor.py +49 -0
  262. snappy/tiling/hyperboloid_dict.py +54 -0
  263. snappy/tiling/iter_utils.py +78 -0
  264. snappy/tiling/lifted_tetrahedron.py +22 -0
  265. snappy/tiling/lifted_tetrahedron_set.py +54 -0
  266. snappy/tiling/real_hash_dict.py +164 -0
  267. snappy/tiling/test.py +23 -0
  268. snappy/tiling/tile.py +215 -0
  269. snappy/tiling/triangle.py +33 -0
  270. snappy/tkterminal.py +113 -84
  271. snappy/twister/main.py +1 -7
  272. snappy/twister/twister_core.cp39-win_amd64.pyd +0 -0
  273. snappy/upper_halfspace/__init__.py +78 -17
  274. snappy/verify/__init__.py +3 -7
  275. snappy/verify/{verifyCanonical.py → canonical.py} +78 -70
  276. snappy/verify/complex_volume/adjust_torsion.py +1 -2
  277. snappy/verify/complex_volume/closed.py +13 -13
  278. snappy/verify/complex_volume/cusped.py +6 -6
  279. snappy/verify/complex_volume/extended_bloch.py +5 -8
  280. snappy/verify/{cuspTranslations.py → cusp_translations.py} +1 -1
  281. snappy/verify/edge_equations.py +80 -0
  282. snappy/verify/exceptions.py +0 -55
  283. snappy/verify/{verifyHyperbolicity.py → hyperbolicity.py} +3 -3
  284. snappy/verify/interval_newton_shapes_engine.py +7 -5
  285. snappy/verify/interval_tree.py +5 -5
  286. snappy/verify/krawczyk_shapes_engine.py +17 -18
  287. snappy/verify/maximal_cusp_area_matrix/__init__.py +7 -74
  288. snappy/verify/maximal_cusp_area_matrix/cusp_tiling_engine.py +3 -4
  289. snappy/verify/maximal_cusp_area_matrix/cusp_translate_engine.py +1 -1
  290. snappy/verify/{realAlgebra.py → real_algebra.py} +1 -1
  291. snappy/verify/shapes.py +5 -3
  292. snappy/verify/short_slopes.py +39 -41
  293. snappy/verify/{squareExtensions.py → square_extensions.py} +14 -11
  294. snappy/verify/test.py +57 -60
  295. snappy/verify/upper_halfspace/extended_matrix.py +1 -1
  296. snappy/verify/upper_halfspace/finite_point.py +3 -4
  297. snappy/verify/upper_halfspace/ideal_point.py +9 -9
  298. snappy/verify/volume.py +2 -2
  299. snappy/version.py +2 -2
  300. {snappy-3.1.1.dist-info → snappy-3.2.dist-info}/METADATA +26 -11
  301. snappy-3.2.dist-info/RECORD +503 -0
  302. {snappy-3.1.1.dist-info → snappy-3.2.dist-info}/WHEEL +1 -1
  303. {snappy-3.1.1.dist-info → snappy-3.2.dist-info}/top_level.txt +6 -1
  304. snappy/__pycache__/__init__.cpython-39.pyc +0 -0
  305. snappy/__pycache__/browser.cpython-39.pyc +0 -0
  306. snappy/__pycache__/cache.cpython-39.pyc +0 -0
  307. snappy/__pycache__/database.cpython-39.pyc +0 -0
  308. snappy/__pycache__/db_utilities.cpython-39.pyc +0 -0
  309. snappy/__pycache__/decorated_isosig.cpython-39.pyc +0 -0
  310. snappy/__pycache__/exceptions.cpython-39.pyc +0 -0
  311. snappy/__pycache__/export_stl.cpython-39.pyc +0 -0
  312. snappy/__pycache__/filedialog.cpython-39.pyc +0 -0
  313. snappy/__pycache__/gui.cpython-39.pyc +0 -0
  314. snappy/__pycache__/horoviewer.cpython-39.pyc +0 -0
  315. snappy/__pycache__/math_basics.cpython-39.pyc +0 -0
  316. snappy/__pycache__/matrix.cpython-39.pyc +0 -0
  317. snappy/__pycache__/number.cpython-39.pyc +0 -0
  318. snappy/__pycache__/numeric_output_checker.cpython-39.pyc +0 -0
  319. snappy/__pycache__/pari.cpython-39.pyc +0 -0
  320. snappy/__pycache__/polyviewer.cpython-39.pyc +0 -0
  321. snappy/__pycache__/sage_helper.cpython-39.pyc +0 -0
  322. snappy/__pycache__/version.cpython-39.pyc +0 -0
  323. snappy/doc/_sources/verify_canon.rst.txt +0 -90
  324. snappy/doc/_static/jquery-3.6.0.js +0 -10881
  325. snappy/doc/_static/js/html5shiv-printshiv.min.js +0 -4
  326. snappy/doc/_static/js/html5shiv.min.js +0 -4
  327. snappy/doc/_static/underscore-1.13.1.js +0 -2042
  328. snappy/doc/_static/underscore.js +0 -6
  329. snappy/doc/verify_canon.html +0 -304
  330. snappy/drilling/__pycache__/__init__.cpython-39.pyc +0 -0
  331. snappy/drilling/__pycache__/constants.cpython-39.pyc +0 -0
  332. snappy/drilling/__pycache__/crush.cpython-39.pyc +0 -0
  333. snappy/drilling/__pycache__/cusps.cpython-39.pyc +0 -0
  334. snappy/drilling/__pycache__/debug.cpython-39.pyc +0 -0
  335. snappy/drilling/__pycache__/epsilons.cpython-39.pyc +0 -0
  336. snappy/drilling/__pycache__/exceptions.cpython-39.pyc +0 -0
  337. snappy/drilling/__pycache__/fixed_points.cpython-39.pyc +0 -0
  338. snappy/drilling/__pycache__/geodesic_info.cpython-39.pyc +0 -0
  339. snappy/drilling/__pycache__/geodesic_tube.cpython-39.pyc +0 -0
  340. snappy/drilling/__pycache__/geometric_structure.cpython-39.pyc +0 -0
  341. snappy/drilling/__pycache__/line.cpython-39.pyc +0 -0
  342. snappy/drilling/__pycache__/moves.cpython-39.pyc +0 -0
  343. snappy/drilling/__pycache__/peripheral_curves.cpython-39.pyc +0 -0
  344. snappy/drilling/__pycache__/perturb.cpython-39.pyc +0 -0
  345. snappy/drilling/__pycache__/quotient_space.cpython-39.pyc +0 -0
  346. snappy/drilling/__pycache__/spatial_dict.cpython-39.pyc +0 -0
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- <h1>Step-by-step examples: Part 4<a class="headerlink" href="#step-by-step-examples-part-4" title="Permalink to this heading"></a></h1>
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- <p><strong>Advanced topics. Still under construction.</strong></p>
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- <section id="the-structure-of-an-exact-solution">
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- <span id="ptolemy-example-structure-of-solution"></span><h2>The structure of an exact solution<a class="headerlink" href="#the-structure-of-an-exact-solution" title="Permalink to this heading"></a></h2>
117
- <p>A solution to the Ptolemy variety (here <code class="docutils literal notranslate"><span class="pre">sol</span></code>) is an object of type <code class="docutils literal notranslate"><span class="pre">PtolemyCoordinates</span></code> which is a subclass of a python dictionary. It assigns a value to each Ptolemy coordinate c<sub>…</sub> (the s<sub>…</sub> are related to the obstruction class which is trivial here). We can get the value assigned to a particular Ptolemy coordinate as follows:</p>
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- <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">sol</span> <span class="o">=</span> <span class="n">Manifold</span><span class="p">(</span><span class="s2">&quot;m003&quot;</span><span class="p">)</span><span class="o">.</span><span class="n">ptolemy_variety</span><span class="p">(</span><span class="mi">2</span><span class="p">)</span><span class="o">.</span><span class="n">retrieve_solutions</span><span class="p">()[</span><span class="mi">0</span><span class="p">]</span>
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- <span class="gp">&gt;&gt;&gt; </span><span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_0101_1&#39;</span><span class="p">]</span>
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- <span class="go">Mod(-x, x^2 - x - 1)</span>
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- </pre></div>
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- </div>
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- <p>This is a pari object of type <cite>POLMOD</cite>. It means that the solution is in the number field with defining polynomial <em>x</em><sup>2</sup>- <em>x</em> - 1 and that it is equal to - <em>x</em> where <em>x</em> is a root in the defining polynomial.</p>
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- <p>We can get to the parts of a pari <cite>POLMOD</cite> object by:</p>
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- <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_0101_1&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">lift</span><span class="p">()</span>
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- <span class="go">-x</span>
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- <span class="gp">&gt;&gt;&gt; </span><span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_0101_1&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">mod</span><span class="p">()</span>
128
- <span class="go">x^2 - x - 1</span>
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- </pre></div>
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- </div>
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- <p>These objects also support the field operations, here we are computing a cross ratio:</p>
132
- <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="p">(</span><span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_0101_0&#39;</span><span class="p">]</span> <span class="o">*</span> <span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_1010_0&#39;</span><span class="p">])</span> <span class="o">/</span> <span class="p">(</span><span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_1001_0&#39;</span><span class="p">]</span> <span class="o">*</span> <span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_0110_0&#39;</span><span class="p">])</span>
133
- <span class="go">Mod(x, x^2 - x - 1)</span>
134
- </pre></div>
135
- </div>
136
- <p><strong>Remark:</strong> We would prefer to represent these using types that are better suited when using sage such as NumberField and NumberFieldElement. In the future, we might jettison support of the ptolemy module outside of sage and use sage’s native types.</p>
137
- </section>
138
- <section id="rational-univariate-representation">
139
- <h2>Rational Univariate Representation<a class="headerlink" href="#rational-univariate-representation" title="Permalink to this heading"></a></h2>
140
- <p>We have some limited support for the <cite>Rational Univariate Representation</cite>, for example:</p>
141
- <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">sols</span> <span class="o">=</span> <span class="n">Manifold</span><span class="p">(</span><span class="s2">&quot;m069&quot;</span><span class="p">)</span><span class="o">.</span><span class="n">ptolemy_variety</span><span class="p">(</span><span class="mi">3</span><span class="p">)</span><span class="o">.</span><span class="n">retrieve_solutions</span><span class="p">()</span>
142
- <span class="gp">&gt;&gt;&gt; </span><span class="n">sols</span><span class="p">[</span><span class="mi">4</span><span class="p">]</span>
143
- <span class="go">PtolemyCoordinates(</span>
144
- <span class="go"> { &#39;c_0201_0&#39;: ( Mod(-426088934700737884313191344*x^24 + 4110489425474123899213651272*x^23 ...</span>
145
- <span class="go"> - 67064980598091504185767190,</span>
146
- <span class="go"> x^25 ... - 196124*x^4 + 14010*x^3 - 1560*x^2 + 72*x - 1)</span>
147
- <span class="go"> ) / ( Mod(875895332415105303646551573*x^24 - 8450034810535061601312104296*x^23 ...</span>
148
- <span class="go"> + 137871639973525691285247446,</span>
149
- <span class="go"> x^25 ... - 196124*x^4 + 14010*x^3 - 1560*x^2 + 72*x - 1) ),</span>
150
- <span class="go"> ...</span>
151
- <span class="go"> },</span>
152
- <span class="go"> is_numerical = False, ...)</span>
153
- </pre></div>
154
- </div>
155
- <p>This means that <code class="docutils literal notranslate"><span class="pre">c_0201_0</span></code> is assigned the fraction of those two <code class="docutils literal notranslate"><span class="pre">POLDMOD</span></code> objects.</p>
156
- <p><strong>Remark:</strong> This is still under development.</p>
157
- </section>
158
- <section id="todo">
159
- <h2>TODO<a class="headerlink" href="#todo" title="Permalink to this heading"></a></h2>
160
- <ul class="simple">
161
- <li><p>Give an overview of the classes and the methods.</p></li>
162
- <li><p>Explain how the magma file are generated. Say that magma computes the RadicalDecomposition. Ptolemy module can process the lexicographic Groebner basis of a prime ideal.</p></li>
163
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164
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165
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+ <section id="step-by-step-examples-part-4">
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+ <h1>Step-by-step examples: Part 4<a class="headerlink" href="#step-by-step-examples-part-4" title="Link to this heading"></a></h1>
111
+ <p><strong>Advanced topics. Still under construction.</strong></p>
112
+ <section id="the-structure-of-an-exact-solution">
113
+ <span id="ptolemy-example-structure-of-solution"></span><h2>The structure of an exact solution<a class="headerlink" href="#the-structure-of-an-exact-solution" title="Link to this heading"></a></h2>
114
+ <p>A solution to the Ptolemy variety (here <code class="docutils literal notranslate"><span class="pre">sol</span></code>) is an object of type <code class="docutils literal notranslate"><span class="pre">PtolemyCoordinates</span></code> which is a subclass of a python dictionary. It assigns a value to each Ptolemy coordinate c<sub>…</sub> (the s<sub>…</sub> are related to the obstruction class which is trivial here). We can get the value assigned to a particular Ptolemy coordinate as follows:</p>
115
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">sol</span> <span class="o">=</span> <span class="n">Manifold</span><span class="p">(</span><span class="s2">&quot;m003&quot;</span><span class="p">)</span><span class="o">.</span><span class="n">ptolemy_variety</span><span class="p">(</span><span class="mi">2</span><span class="p">)</span><span class="o">.</span><span class="n">retrieve_solutions</span><span class="p">()[</span><span class="mi">0</span><span class="p">]</span>
116
+ <span class="gp">&gt;&gt;&gt; </span><span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_0101_1&#39;</span><span class="p">]</span>
117
+ <span class="go">Mod(-x, x^2 - x - 1)</span>
118
+ </pre></div>
119
+ </div>
120
+ <p>This is a pari object of type <cite>POLMOD</cite>. It means that the solution is in the number field with defining polynomial <em>x</em><sup>2</sup>- <em>x</em> - 1 and that it is equal to - <em>x</em> where <em>x</em> is a root in the defining polynomial.</p>
121
+ <p>We can get to the parts of a pari <cite>POLMOD</cite> object by:</p>
122
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_0101_1&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">lift</span><span class="p">()</span>
123
+ <span class="go">-x</span>
124
+ <span class="gp">&gt;&gt;&gt; </span><span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_0101_1&#39;</span><span class="p">]</span><span class="o">.</span><span class="n">mod</span><span class="p">()</span>
125
+ <span class="go">x^2 - x - 1</span>
126
+ </pre></div>
127
+ </div>
128
+ <p>These objects also support the field operations, here we are computing a cross ratio:</p>
129
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="p">(</span><span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_0101_0&#39;</span><span class="p">]</span> <span class="o">*</span> <span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_1010_0&#39;</span><span class="p">])</span> <span class="o">/</span> <span class="p">(</span><span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_1001_0&#39;</span><span class="p">]</span> <span class="o">*</span> <span class="n">sol</span><span class="p">[</span><span class="s1">&#39;c_0110_0&#39;</span><span class="p">])</span>
130
+ <span class="go">Mod(x, x^2 - x - 1)</span>
131
+ </pre></div>
132
+ </div>
133
+ <p><strong>Remark:</strong> We would prefer to represent these using types that are better suited when using sage such as NumberField and NumberFieldElement. In the future, we might jettison support of the ptolemy module outside of sage and use sage’s native types.</p>
134
+ </section>
135
+ <section id="rational-univariate-representation">
136
+ <h2>Rational Univariate Representation<a class="headerlink" href="#rational-univariate-representation" title="Link to this heading"></a></h2>
137
+ <p>We have some limited support for the <cite>Rational Univariate Representation</cite>, for example:</p>
138
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="gp">&gt;&gt;&gt; </span><span class="n">sols</span> <span class="o">=</span> <span class="n">Manifold</span><span class="p">(</span><span class="s2">&quot;m069&quot;</span><span class="p">)</span><span class="o">.</span><span class="n">ptolemy_variety</span><span class="p">(</span><span class="mi">3</span><span class="p">)</span><span class="o">.</span><span class="n">retrieve_solutions</span><span class="p">()</span>
139
+ <span class="gp">&gt;&gt;&gt; </span><span class="n">sols</span><span class="p">[</span><span class="mi">4</span><span class="p">]</span>
140
+ <span class="go">PtolemyCoordinates(</span>
141
+ <span class="go"> { &#39;c_0201_0&#39;: ( Mod(-426088934700737884313191344*x^24 + 4110489425474123899213651272*x^23 ...</span>
142
+ <span class="go"> - 67064980598091504185767190,</span>
143
+ <span class="go"> x^25 ... - 196124*x^4 + 14010*x^3 - 1560*x^2 + 72*x - 1)</span>
144
+ <span class="go"> ) / ( Mod(875895332415105303646551573*x^24 - 8450034810535061601312104296*x^23 ...</span>
145
+ <span class="go"> + 137871639973525691285247446,</span>
146
+ <span class="go"> x^25 ... - 196124*x^4 + 14010*x^3 - 1560*x^2 + 72*x - 1) ),</span>
147
+ <span class="go"> ...</span>
148
+ <span class="go"> },</span>
149
+ <span class="go"> is_numerical = False, ...)</span>
150
+ </pre></div>
151
+ </div>
152
+ <p>This means that <code class="docutils literal notranslate"><span class="pre">c_0201_0</span></code> is assigned the fraction of those two <code class="docutils literal notranslate"><span class="pre">POLDMOD</span></code> objects.</p>
153
+ <p><strong>Remark:</strong> This is still under development.</p>
154
+ </section>
155
+ <section id="todo">
156
+ <h2>TODO<a class="headerlink" href="#todo" title="Link to this heading"></a></h2>
157
+ <ul class="simple">
158
+ <li><p>Give an overview of the classes and the methods.</p></li>
159
+ <li><p>Explain how the magma file are generated. Say that magma computes the RadicalDecomposition. Ptolemy module can process the lexicographic Groebner basis of a prime ideal.</p></li>
160
+ </ul>
161
+ </section>
162
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