scitex 2.0.0__py2.py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (572) hide show
  1. scitex/__init__.py +73 -0
  2. scitex/__main__.py +89 -0
  3. scitex/__version__.py +14 -0
  4. scitex/_sh.py +59 -0
  5. scitex/ai/_LearningCurveLogger.py +583 -0
  6. scitex/ai/__Classifiers.py +101 -0
  7. scitex/ai/__init__.py +55 -0
  8. scitex/ai/_gen_ai/_Anthropic.py +173 -0
  9. scitex/ai/_gen_ai/_BaseGenAI.py +336 -0
  10. scitex/ai/_gen_ai/_DeepSeek.py +175 -0
  11. scitex/ai/_gen_ai/_Google.py +161 -0
  12. scitex/ai/_gen_ai/_Groq.py +97 -0
  13. scitex/ai/_gen_ai/_Llama.py +142 -0
  14. scitex/ai/_gen_ai/_OpenAI.py +230 -0
  15. scitex/ai/_gen_ai/_PARAMS.py +565 -0
  16. scitex/ai/_gen_ai/_Perplexity.py +191 -0
  17. scitex/ai/_gen_ai/__init__.py +32 -0
  18. scitex/ai/_gen_ai/_calc_cost.py +78 -0
  19. scitex/ai/_gen_ai/_format_output_func.py +183 -0
  20. scitex/ai/_gen_ai/_genai_factory.py +71 -0
  21. scitex/ai/act/__init__.py +8 -0
  22. scitex/ai/act/_define.py +11 -0
  23. scitex/ai/classification/__init__.py +7 -0
  24. scitex/ai/classification/classification_reporter.py +1137 -0
  25. scitex/ai/classification/classifier_server.py +131 -0
  26. scitex/ai/classification/classifiers.py +101 -0
  27. scitex/ai/classification_reporter.py +1161 -0
  28. scitex/ai/classifier_server.py +131 -0
  29. scitex/ai/clustering/__init__.py +11 -0
  30. scitex/ai/clustering/_pca.py +115 -0
  31. scitex/ai/clustering/_umap.py +376 -0
  32. scitex/ai/early_stopping.py +149 -0
  33. scitex/ai/feature_extraction/__init__.py +56 -0
  34. scitex/ai/feature_extraction/vit.py +148 -0
  35. scitex/ai/genai/__init__.py +277 -0
  36. scitex/ai/genai/anthropic.py +177 -0
  37. scitex/ai/genai/anthropic_provider.py +320 -0
  38. scitex/ai/genai/anthropic_refactored.py +109 -0
  39. scitex/ai/genai/auth_manager.py +200 -0
  40. scitex/ai/genai/base_genai.py +336 -0
  41. scitex/ai/genai/base_provider.py +291 -0
  42. scitex/ai/genai/calc_cost.py +78 -0
  43. scitex/ai/genai/chat_history.py +307 -0
  44. scitex/ai/genai/cost_tracker.py +276 -0
  45. scitex/ai/genai/deepseek.py +188 -0
  46. scitex/ai/genai/deepseek_provider.py +251 -0
  47. scitex/ai/genai/format_output_func.py +183 -0
  48. scitex/ai/genai/genai_factory.py +71 -0
  49. scitex/ai/genai/google.py +169 -0
  50. scitex/ai/genai/google_provider.py +228 -0
  51. scitex/ai/genai/groq.py +104 -0
  52. scitex/ai/genai/groq_provider.py +248 -0
  53. scitex/ai/genai/image_processor.py +250 -0
  54. scitex/ai/genai/llama.py +155 -0
  55. scitex/ai/genai/llama_provider.py +214 -0
  56. scitex/ai/genai/mock_provider.py +127 -0
  57. scitex/ai/genai/model_registry.py +304 -0
  58. scitex/ai/genai/openai.py +230 -0
  59. scitex/ai/genai/openai_provider.py +293 -0
  60. scitex/ai/genai/params.py +565 -0
  61. scitex/ai/genai/perplexity.py +202 -0
  62. scitex/ai/genai/perplexity_provider.py +205 -0
  63. scitex/ai/genai/provider_base.py +302 -0
  64. scitex/ai/genai/provider_factory.py +370 -0
  65. scitex/ai/genai/response_handler.py +235 -0
  66. scitex/ai/layer/_Pass.py +21 -0
  67. scitex/ai/layer/__init__.py +10 -0
  68. scitex/ai/layer/_switch.py +8 -0
  69. scitex/ai/loss/_L1L2Losses.py +34 -0
  70. scitex/ai/loss/__init__.py +12 -0
  71. scitex/ai/loss/multi_task_loss.py +47 -0
  72. scitex/ai/metrics/__init__.py +9 -0
  73. scitex/ai/metrics/_bACC.py +51 -0
  74. scitex/ai/metrics/silhoute_score_block.py +496 -0
  75. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/__init__.py +0 -0
  76. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/__init__.py +3 -0
  77. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger.py +207 -0
  78. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger2020.py +238 -0
  79. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger913A.py +215 -0
  80. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/rangerqh.py +184 -0
  81. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/setup.py +24 -0
  82. scitex/ai/optim/__init__.py +13 -0
  83. scitex/ai/optim/_get_set.py +31 -0
  84. scitex/ai/optim/_optimizers.py +71 -0
  85. scitex/ai/plt/__init__.py +21 -0
  86. scitex/ai/plt/_conf_mat.py +592 -0
  87. scitex/ai/plt/_learning_curve.py +194 -0
  88. scitex/ai/plt/_optuna_study.py +111 -0
  89. scitex/ai/plt/aucs/__init__.py +2 -0
  90. scitex/ai/plt/aucs/example.py +60 -0
  91. scitex/ai/plt/aucs/pre_rec_auc.py +223 -0
  92. scitex/ai/plt/aucs/roc_auc.py +246 -0
  93. scitex/ai/sampling/undersample.py +29 -0
  94. scitex/ai/sk/__init__.py +11 -0
  95. scitex/ai/sk/_clf.py +58 -0
  96. scitex/ai/sk/_to_sktime.py +100 -0
  97. scitex/ai/sklearn/__init__.py +26 -0
  98. scitex/ai/sklearn/clf.py +58 -0
  99. scitex/ai/sklearn/to_sktime.py +100 -0
  100. scitex/ai/training/__init__.py +7 -0
  101. scitex/ai/training/early_stopping.py +150 -0
  102. scitex/ai/training/learning_curve_logger.py +555 -0
  103. scitex/ai/utils/__init__.py +22 -0
  104. scitex/ai/utils/_check_params.py +50 -0
  105. scitex/ai/utils/_default_dataset.py +46 -0
  106. scitex/ai/utils/_format_samples_for_sktime.py +26 -0
  107. scitex/ai/utils/_label_encoder.py +134 -0
  108. scitex/ai/utils/_merge_labels.py +22 -0
  109. scitex/ai/utils/_sliding_window_data_augmentation.py +11 -0
  110. scitex/ai/utils/_under_sample.py +51 -0
  111. scitex/ai/utils/_verify_n_gpus.py +16 -0
  112. scitex/ai/utils/grid_search.py +148 -0
  113. scitex/context/__init__.py +9 -0
  114. scitex/context/_suppress_output.py +38 -0
  115. scitex/db/_BaseMixins/_BaseBackupMixin.py +30 -0
  116. scitex/db/_BaseMixins/_BaseBatchMixin.py +31 -0
  117. scitex/db/_BaseMixins/_BaseBlobMixin.py +81 -0
  118. scitex/db/_BaseMixins/_BaseConnectionMixin.py +43 -0
  119. scitex/db/_BaseMixins/_BaseImportExportMixin.py +39 -0
  120. scitex/db/_BaseMixins/_BaseIndexMixin.py +29 -0
  121. scitex/db/_BaseMixins/_BaseMaintenanceMixin.py +33 -0
  122. scitex/db/_BaseMixins/_BaseQueryMixin.py +52 -0
  123. scitex/db/_BaseMixins/_BaseRowMixin.py +32 -0
  124. scitex/db/_BaseMixins/_BaseSchemaMixin.py +44 -0
  125. scitex/db/_BaseMixins/_BaseTableMixin.py +66 -0
  126. scitex/db/_BaseMixins/_BaseTransactionMixin.py +52 -0
  127. scitex/db/_BaseMixins/__init__.py +30 -0
  128. scitex/db/_PostgreSQL.py +126 -0
  129. scitex/db/_PostgreSQLMixins/_BackupMixin.py +166 -0
  130. scitex/db/_PostgreSQLMixins/_BatchMixin.py +82 -0
  131. scitex/db/_PostgreSQLMixins/_BlobMixin.py +231 -0
  132. scitex/db/_PostgreSQLMixins/_ConnectionMixin.py +92 -0
  133. scitex/db/_PostgreSQLMixins/_ImportExportMixin.py +59 -0
  134. scitex/db/_PostgreSQLMixins/_IndexMixin.py +64 -0
  135. scitex/db/_PostgreSQLMixins/_MaintenanceMixin.py +175 -0
  136. scitex/db/_PostgreSQLMixins/_QueryMixin.py +108 -0
  137. scitex/db/_PostgreSQLMixins/_RowMixin.py +75 -0
  138. scitex/db/_PostgreSQLMixins/_SchemaMixin.py +126 -0
  139. scitex/db/_PostgreSQLMixins/_TableMixin.py +176 -0
  140. scitex/db/_PostgreSQLMixins/_TransactionMixin.py +57 -0
  141. scitex/db/_PostgreSQLMixins/__init__.py +34 -0
  142. scitex/db/_SQLite3.py +2136 -0
  143. scitex/db/_SQLite3Mixins/_BatchMixin.py +243 -0
  144. scitex/db/_SQLite3Mixins/_BlobMixin.py +229 -0
  145. scitex/db/_SQLite3Mixins/_ConnectionMixin.py +108 -0
  146. scitex/db/_SQLite3Mixins/_ImportExportMixin.py +80 -0
  147. scitex/db/_SQLite3Mixins/_IndexMixin.py +32 -0
  148. scitex/db/_SQLite3Mixins/_MaintenanceMixin.py +176 -0
  149. scitex/db/_SQLite3Mixins/_QueryMixin.py +83 -0
  150. scitex/db/_SQLite3Mixins/_RowMixin.py +75 -0
  151. scitex/db/_SQLite3Mixins/_TableMixin.py +183 -0
  152. scitex/db/_SQLite3Mixins/_TransactionMixin.py +71 -0
  153. scitex/db/_SQLite3Mixins/__init__.py +30 -0
  154. scitex/db/__init__.py +14 -0
  155. scitex/db/_delete_duplicates.py +397 -0
  156. scitex/db/_inspect.py +163 -0
  157. scitex/decorators/__init__.py +54 -0
  158. scitex/decorators/_auto_order.py +172 -0
  159. scitex/decorators/_batch_fn.py +127 -0
  160. scitex/decorators/_cache_disk.py +32 -0
  161. scitex/decorators/_cache_mem.py +12 -0
  162. scitex/decorators/_combined.py +98 -0
  163. scitex/decorators/_converters.py +282 -0
  164. scitex/decorators/_deprecated.py +26 -0
  165. scitex/decorators/_not_implemented.py +30 -0
  166. scitex/decorators/_numpy_fn.py +86 -0
  167. scitex/decorators/_pandas_fn.py +121 -0
  168. scitex/decorators/_preserve_doc.py +19 -0
  169. scitex/decorators/_signal_fn.py +95 -0
  170. scitex/decorators/_timeout.py +55 -0
  171. scitex/decorators/_torch_fn.py +136 -0
  172. scitex/decorators/_wrap.py +39 -0
  173. scitex/decorators/_xarray_fn.py +88 -0
  174. scitex/dev/__init__.py +15 -0
  175. scitex/dev/_analyze_code_flow.py +284 -0
  176. scitex/dev/_reload.py +59 -0
  177. scitex/dict/_DotDict.py +442 -0
  178. scitex/dict/__init__.py +18 -0
  179. scitex/dict/_listed_dict.py +42 -0
  180. scitex/dict/_pop_keys.py +36 -0
  181. scitex/dict/_replace.py +13 -0
  182. scitex/dict/_safe_merge.py +62 -0
  183. scitex/dict/_to_str.py +32 -0
  184. scitex/dsp/__init__.py +72 -0
  185. scitex/dsp/_crop.py +122 -0
  186. scitex/dsp/_demo_sig.py +331 -0
  187. scitex/dsp/_detect_ripples.py +212 -0
  188. scitex/dsp/_ensure_3d.py +18 -0
  189. scitex/dsp/_hilbert.py +78 -0
  190. scitex/dsp/_listen.py +702 -0
  191. scitex/dsp/_misc.py +30 -0
  192. scitex/dsp/_mne.py +32 -0
  193. scitex/dsp/_modulation_index.py +79 -0
  194. scitex/dsp/_pac.py +319 -0
  195. scitex/dsp/_psd.py +102 -0
  196. scitex/dsp/_resample.py +65 -0
  197. scitex/dsp/_time.py +36 -0
  198. scitex/dsp/_transform.py +68 -0
  199. scitex/dsp/_wavelet.py +212 -0
  200. scitex/dsp/add_noise.py +111 -0
  201. scitex/dsp/example.py +253 -0
  202. scitex/dsp/filt.py +155 -0
  203. scitex/dsp/norm.py +18 -0
  204. scitex/dsp/params.py +51 -0
  205. scitex/dsp/reference.py +43 -0
  206. scitex/dsp/template.py +25 -0
  207. scitex/dsp/utils/__init__.py +15 -0
  208. scitex/dsp/utils/_differential_bandpass_filters.py +120 -0
  209. scitex/dsp/utils/_ensure_3d.py +18 -0
  210. scitex/dsp/utils/_ensure_even_len.py +10 -0
  211. scitex/dsp/utils/_zero_pad.py +48 -0
  212. scitex/dsp/utils/filter.py +408 -0
  213. scitex/dsp/utils/pac.py +177 -0
  214. scitex/dt/__init__.py +8 -0
  215. scitex/dt/_linspace.py +130 -0
  216. scitex/etc/__init__.py +15 -0
  217. scitex/etc/wait_key.py +34 -0
  218. scitex/gen/_DimHandler.py +196 -0
  219. scitex/gen/_TimeStamper.py +244 -0
  220. scitex/gen/__init__.py +95 -0
  221. scitex/gen/_alternate_kwarg.py +13 -0
  222. scitex/gen/_cache.py +11 -0
  223. scitex/gen/_check_host.py +34 -0
  224. scitex/gen/_ci.py +12 -0
  225. scitex/gen/_close.py +222 -0
  226. scitex/gen/_embed.py +78 -0
  227. scitex/gen/_inspect_module.py +257 -0
  228. scitex/gen/_is_ipython.py +12 -0
  229. scitex/gen/_less.py +48 -0
  230. scitex/gen/_list_packages.py +139 -0
  231. scitex/gen/_mat2py.py +88 -0
  232. scitex/gen/_norm.py +170 -0
  233. scitex/gen/_paste.py +18 -0
  234. scitex/gen/_print_config.py +84 -0
  235. scitex/gen/_shell.py +48 -0
  236. scitex/gen/_src.py +111 -0
  237. scitex/gen/_start.py +451 -0
  238. scitex/gen/_symlink.py +55 -0
  239. scitex/gen/_symlog.py +27 -0
  240. scitex/gen/_tee.py +238 -0
  241. scitex/gen/_title2path.py +60 -0
  242. scitex/gen/_title_case.py +88 -0
  243. scitex/gen/_to_even.py +84 -0
  244. scitex/gen/_to_odd.py +34 -0
  245. scitex/gen/_to_rank.py +39 -0
  246. scitex/gen/_transpose.py +37 -0
  247. scitex/gen/_type.py +78 -0
  248. scitex/gen/_var_info.py +73 -0
  249. scitex/gen/_wrap.py +17 -0
  250. scitex/gen/_xml2dict.py +76 -0
  251. scitex/gen/misc.py +730 -0
  252. scitex/gen/path.py +0 -0
  253. scitex/general/__init__.py +5 -0
  254. scitex/gists/_SigMacro_processFigure_S.py +128 -0
  255. scitex/gists/_SigMacro_toBlue.py +172 -0
  256. scitex/gists/__init__.py +12 -0
  257. scitex/io/_H5Explorer.py +292 -0
  258. scitex/io/__init__.py +82 -0
  259. scitex/io/_cache.py +101 -0
  260. scitex/io/_flush.py +24 -0
  261. scitex/io/_glob.py +103 -0
  262. scitex/io/_json2md.py +113 -0
  263. scitex/io/_load.py +168 -0
  264. scitex/io/_load_configs.py +146 -0
  265. scitex/io/_load_modules/__init__.py +38 -0
  266. scitex/io/_load_modules/_catboost.py +66 -0
  267. scitex/io/_load_modules/_con.py +20 -0
  268. scitex/io/_load_modules/_db.py +24 -0
  269. scitex/io/_load_modules/_docx.py +42 -0
  270. scitex/io/_load_modules/_eeg.py +110 -0
  271. scitex/io/_load_modules/_hdf5.py +196 -0
  272. scitex/io/_load_modules/_image.py +19 -0
  273. scitex/io/_load_modules/_joblib.py +19 -0
  274. scitex/io/_load_modules/_json.py +18 -0
  275. scitex/io/_load_modules/_markdown.py +103 -0
  276. scitex/io/_load_modules/_matlab.py +37 -0
  277. scitex/io/_load_modules/_numpy.py +39 -0
  278. scitex/io/_load_modules/_optuna.py +155 -0
  279. scitex/io/_load_modules/_pandas.py +69 -0
  280. scitex/io/_load_modules/_pdf.py +31 -0
  281. scitex/io/_load_modules/_pickle.py +24 -0
  282. scitex/io/_load_modules/_torch.py +16 -0
  283. scitex/io/_load_modules/_txt.py +126 -0
  284. scitex/io/_load_modules/_xml.py +49 -0
  285. scitex/io/_load_modules/_yaml.py +23 -0
  286. scitex/io/_mv_to_tmp.py +19 -0
  287. scitex/io/_path.py +286 -0
  288. scitex/io/_reload.py +78 -0
  289. scitex/io/_save.py +539 -0
  290. scitex/io/_save_modules/__init__.py +66 -0
  291. scitex/io/_save_modules/_catboost.py +22 -0
  292. scitex/io/_save_modules/_csv.py +89 -0
  293. scitex/io/_save_modules/_excel.py +49 -0
  294. scitex/io/_save_modules/_hdf5.py +249 -0
  295. scitex/io/_save_modules/_html.py +48 -0
  296. scitex/io/_save_modules/_image.py +140 -0
  297. scitex/io/_save_modules/_joblib.py +25 -0
  298. scitex/io/_save_modules/_json.py +25 -0
  299. scitex/io/_save_modules/_listed_dfs_as_csv.py +57 -0
  300. scitex/io/_save_modules/_listed_scalars_as_csv.py +42 -0
  301. scitex/io/_save_modules/_matlab.py +24 -0
  302. scitex/io/_save_modules/_mp4.py +29 -0
  303. scitex/io/_save_modules/_numpy.py +57 -0
  304. scitex/io/_save_modules/_optuna_study_as_csv_and_pngs.py +38 -0
  305. scitex/io/_save_modules/_pickle.py +45 -0
  306. scitex/io/_save_modules/_plotly.py +27 -0
  307. scitex/io/_save_modules/_text.py +23 -0
  308. scitex/io/_save_modules/_torch.py +26 -0
  309. scitex/io/_save_modules/_yaml.py +29 -0
  310. scitex/life/__init__.py +10 -0
  311. scitex/life/_monitor_rain.py +49 -0
  312. scitex/linalg/__init__.py +17 -0
  313. scitex/linalg/_distance.py +63 -0
  314. scitex/linalg/_geometric_median.py +64 -0
  315. scitex/linalg/_misc.py +73 -0
  316. scitex/nn/_AxiswiseDropout.py +27 -0
  317. scitex/nn/_BNet.py +126 -0
  318. scitex/nn/_BNet_Res.py +164 -0
  319. scitex/nn/_ChannelGainChanger.py +44 -0
  320. scitex/nn/_DropoutChannels.py +50 -0
  321. scitex/nn/_Filters.py +489 -0
  322. scitex/nn/_FreqGainChanger.py +110 -0
  323. scitex/nn/_GaussianFilter.py +48 -0
  324. scitex/nn/_Hilbert.py +111 -0
  325. scitex/nn/_MNet_1000.py +157 -0
  326. scitex/nn/_ModulationIndex.py +221 -0
  327. scitex/nn/_PAC.py +414 -0
  328. scitex/nn/_PSD.py +40 -0
  329. scitex/nn/_ResNet1D.py +120 -0
  330. scitex/nn/_SpatialAttention.py +25 -0
  331. scitex/nn/_Spectrogram.py +161 -0
  332. scitex/nn/_SwapChannels.py +50 -0
  333. scitex/nn/_TransposeLayer.py +19 -0
  334. scitex/nn/_Wavelet.py +183 -0
  335. scitex/nn/__init__.py +63 -0
  336. scitex/os/__init__.py +8 -0
  337. scitex/os/_mv.py +50 -0
  338. scitex/parallel/__init__.py +8 -0
  339. scitex/parallel/_run.py +151 -0
  340. scitex/path/__init__.py +33 -0
  341. scitex/path/_clean.py +52 -0
  342. scitex/path/_find.py +108 -0
  343. scitex/path/_get_module_path.py +51 -0
  344. scitex/path/_get_spath.py +35 -0
  345. scitex/path/_getsize.py +18 -0
  346. scitex/path/_increment_version.py +87 -0
  347. scitex/path/_mk_spath.py +51 -0
  348. scitex/path/_path.py +19 -0
  349. scitex/path/_split.py +23 -0
  350. scitex/path/_this_path.py +19 -0
  351. scitex/path/_version.py +101 -0
  352. scitex/pd/__init__.py +41 -0
  353. scitex/pd/_find_indi.py +126 -0
  354. scitex/pd/_find_pval.py +113 -0
  355. scitex/pd/_force_df.py +154 -0
  356. scitex/pd/_from_xyz.py +71 -0
  357. scitex/pd/_ignore_SettingWithCopyWarning.py +34 -0
  358. scitex/pd/_melt_cols.py +81 -0
  359. scitex/pd/_merge_columns.py +221 -0
  360. scitex/pd/_mv.py +63 -0
  361. scitex/pd/_replace.py +62 -0
  362. scitex/pd/_round.py +93 -0
  363. scitex/pd/_slice.py +63 -0
  364. scitex/pd/_sort.py +91 -0
  365. scitex/pd/_to_numeric.py +53 -0
  366. scitex/pd/_to_xy.py +59 -0
  367. scitex/pd/_to_xyz.py +110 -0
  368. scitex/plt/__init__.py +36 -0
  369. scitex/plt/_subplots/_AxesWrapper.py +182 -0
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@@ -0,0 +1,307 @@
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+ Metadata-Version: 2.4
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+ Name: scitex
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+ Version: 2.0.0
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+ Summary: For lazy python users (monogusa people in Japanese), especially in ML/DSP fields
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+ Home-page: https://github.com/ywatanabe1989/scitex
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+ Author: Yusuke Watanabe
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+ Author-email: ywatanabe1989 <ywatanabe@alumni.u-tokyo.ac.jp>
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+ License: MIT
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+ Project-URL: Homepage, https://github.com/ywatanabe1989/SciTeX-Code
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+ Keywords: utils,utilities,python,machine learning
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+ Classifier: Programming Language :: Python :: 3
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+ Classifier: License :: OSI Approved :: MIT License
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+ Requires-Python: >=3.0
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+ Description-Content-Type: text/markdown
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+ License-File: LICENSE
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+ Requires-Dist: GitPython
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+ Requires-Dist: Pillow
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+ Requires-Dist: PyYAML
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+ Requires-Dist: Pyarrow
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+ Requires-Dist: accelerate
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+ Requires-Dist: aiohttp
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+ Requires-Dist: ansi-escapes
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+ Requires-Dist: anthropic
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+ Requires-Dist: attrdict
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+ Requires-Dist: bitsandbytes
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+ Requires-Dist: black
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+ Requires-Dist: bs4
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+ Requires-Dist: chardet
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+ Requires-Dist: docutils<0.18
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+ Requires-Dist: einops
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+ Requires-Dist: epc
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+ Requires-Dist: fairscale
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+ Requires-Dist: fastapi
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+ Requires-Dist: flake8
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+ Requires-Dist: flask
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+ Requires-Dist: geom_median
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+ Requires-Dist: google-genai
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+ Requires-Dist: google-search-results
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+ Requires-Dist: googlesearch-python
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+ Requires-Dist: groq
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+ Requires-Dist: h5py
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+ Requires-Dist: html2text
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+ Requires-Dist: icecream
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+ Requires-Dist: ipdb
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+ Requires-Dist: ipython
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+ Requires-Dist: isort
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+ Requires-Dist: jedi
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+ Requires-Dist: joblib
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+ Requires-Dist: joypy
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+ Requires-Dist: julius
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+ Requires-Dist: llama-stack
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+ Requires-Dist: lxml
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+ Requires-Dist: lxml_html_clean
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+ Requires-Dist: markdown
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+ Requires-Dist: markdown2
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+ Requires-Dist: matplotlib
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+ Requires-Dist: matplotlib-venn
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+ Requires-Dist: mne
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+ Requires-Dist: more-itertools
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+ Requires-Dist: natsort
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+ Requires-Dist: numpy
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+ Requires-Dist: obspy
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+ Requires-Dist: openai
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+ Requires-Dist: openpyxl
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+ Requires-Dist: optuna
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+ Requires-Dist: packaging
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+ Requires-Dist: pandas
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+ Requires-Dist: pebble
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+ Requires-Dist: platformdirs
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+ Requires-Dist: plotly
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+ Requires-Dist: plyer
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+ Requires-Dist: psutil
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+ Requires-Dist: psycopg2-binary
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+ Requires-Dist: pybids
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+ Requires-Dist: pyedflib
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+ Requires-Dist: pygments
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+ Requires-Dist: pyls
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+ Requires-Dist: pymatreader
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+ Requires-Dist: pyperclip
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+ Requires-Dist: pyright
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+ Requires-Dist: pytest
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+ Requires-Dist: pytest-cov
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+ Requires-Dist: pytest-env
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+ Requires-Dist: pytest-xdist
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+ Requires-Dist: python-docx
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+ Requires-Dist: python-lsp-server
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+ Requires-Dist: pytorch_pretrained_vit
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+ Requires-Dist: pytorch-optimizer
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+ Requires-Dist: scipy
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+ Requires-Dist: seaborn
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+ Requires-Dist: selenium
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+ Requires-Dist: setuptools
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+ Requires-Dist: six
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+ Requires-Dist: sktime
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+ Requires-Dist: sounddevice
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+ Requires-Dist: sphinx
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+ Requires-Dist: sqlalchemy
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+ Requires-Dist: statsmodels
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+ Requires-Dist: sympy
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+ Requires-Dist: tabulate
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+ Requires-Dist: tensorpac
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+ Requires-Dist: termplotlib
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+ Requires-Dist: timeout-decorator
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+ Requires-Dist: tk
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+ Requires-Dist: tldr
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+ Requires-Dist: torch
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+ Requires-Dist: torchaudio
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+ Requires-Dist: torchsummary
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+ Requires-Dist: torchvision
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+ Requires-Dist: transformers
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+ Requires-Dist: twine
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+ Requires-Dist: umap-learn
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+ Requires-Dist: webdriver-manager
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+ Requires-Dist: wheel
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+ Requires-Dist: xarray
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+ Requires-Dist: xlrd
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+ Requires-Dist: xmltodict
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+ Dynamic: license-file
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+
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+ <!-- ---
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+ !-- Timestamp: 2025-05-30 16:10:54
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+ !-- Author: ywatanabe
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+ !-- File: /ssh:ywatanabe@sp:/home/ywatanabe/proj/.claude-worktree/scitex_repo/README.md
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+ !-- --- -->
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+
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+
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+ # scitex (monogusa; meaning lazy person in Japanese)
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+ A comprehensive Python framework for scientific computing, machine learning, and data analysis.
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+
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+ <!-- badges -->
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+ [![PyPI version](https://badge.fury.io/py/scitex.svg)](https://badge.fury.io/py/scitex)
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+ [![Python Versions](https://img.shields.io/pypi/pyversions/scitex.svg)](https://pypi.org/project/scitex/)
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+ [![License](https://img.shields.io/github/license/ywatanabe1989/SciTeX-Code)](https://github.com/ywatanabe1989/SciTeX-Code/blob/main/LICENSE)
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+ [![Tests](https://github.com/ywatanabe1989/SciTeX-Code/actions/workflows/ci.yml/badge.svg)](https://github.com/ywatanabe1989/SciTeX-Code/actions)
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+ [![Coverage](https://codecov.io/gh/ywatanabe1989/SciTeX-Code/branch/main/graph/badge.svg)](https://codecov.io/gh/ywatanabe1989/SciTeX-Code)
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+ [![Documentation](https://readthedocs.org/projects/scitex/badge/?version=latest)](https://scitex.readthedocs.io/en/latest/?badge=latest)
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+ [![Code Style](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black)
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+ [![Pre-commit](https://img.shields.io/badge/pre--commit-enabled-brightgreen?logo=pre-commit&logoColor=white)](https://github.com/pre-commit/pre-commit)
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+
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+ ## ✨ Features
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+
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+ - **🧪 100% Test Coverage**: Comprehensive test suite ensuring reliability
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+ - **📚 Fully Documented**: Complete API documentation with examples
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+ - **🔧 Multi-Domain**: Scientific computing, ML, signal processing, and more
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+ - **🐍 Type Safe**: Full type hints for better IDE support
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+ - **⚡ Performance**: Optimized implementations with GPU support
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+ - **🔄 Interoperable**: Seamless numpy/torch/pandas integration
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+
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+ ## 📦 Installation
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+
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+ ```bash
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+ # From PyPI (stable)
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+ pip install scitex
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+
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+ # From GitHub (latest)
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+ pip install git+https://github.com/ywatanabe1989/SciTeX-Code.git@main
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+
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+ # Development installation
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+ git clone https://github.com/ywatanabe1989/SciTeX-Code.git
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+ cd SciTeX-Code
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+ pip install -e ".[dev]"
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+ ```
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+
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+
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+ ## Submodules
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+
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+ | Category | Submodule | Description |
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+ |-----------------------|---------------------------------------------------|----------------------------------|
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+ | **Fundamentals** | [`scitex.gen`](./src/scitex/gen#readme) | General utilities |
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+ | | [`scitex.io`](./src/scitex/io#readme) | Input/Output operations |
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+ | | [`scitex.utils`](./src/scitex/utils#readme) | General utilities |
182
+ | | [`scitex.dict`](./src/scitex/dict#readme) | Dictionary utilities |
183
+ | | [`scitex.str`](./src/scitex/str#readme) | String manipulation |
184
+ | | [`scitex.torch`](./src/scitex/torch#readme) | PyTorch utilities |
185
+ | **Data Science** | [`scitex.plt`](./src/scitex/plt#readme) | Plotting with automatic tracking |
186
+ | | [`scitex.stats`](./src/scitex/stats#readme) | Statistical analysis |
187
+ | | [`scitex.pd`](./src/scitex/pd#readme) | Pandas utilities |
188
+ | | [`scitex.tex`](./src/scitex/tex#readme) | LaTeX utilities |
189
+ | **AI: ML/PR** | [`scitex.ai`](./src/scitex/ai#readme) | AI and Machine Learning |
190
+ | | [`scitex.nn`](./src/scitex/nn#readme) | Neural Networks |
191
+ | | [`scitex.torch`](./src/scitex/torch#readme) | PyTorch utilities |
192
+ | | [`scitex.db`](./src/scitex/db#readme) | Database operations |
193
+ | | [`scitex.linalg`](./src/scitex/linalg#readme) | Linear algebra |
194
+ | **Signal Processing** | [`scitex.dsp`](./src/scitex/dsp#readme) | Digital Signal Processing |
195
+ | **Statistics** | [`scitex.stats`](./src/scitex/stats#readme) | Statistical analysis tools |
196
+ | **ETC** | [`scitex.decorators`](./src/scitex/decorators#readme) | Function decorators |
197
+ | | [`scitex.gists`](./src/scitex/gists#readme) | Code snippets |
198
+ | | [`scitex.resource`](./src/scitex/resource#readme) | Resource management |
199
+ | | [`scitex.web`](./src/scitex/web#readme) | Web-related functions |
200
+
201
+ <!-- ## Submodules
202
+ !-- #### Fundamentals
203
+ !-- - [`scitex.gen`](./src/scitex/gen#readme): General utilities
204
+ !-- - [`scitex.io`](./src/scitex/io#readme): Input/Output operations
205
+ !-- - [`scitex.utils`](./src/scitex/utils#readme): General utilities
206
+ !-- - [`scitex.dict`](./src/scitex/dict#readme): Dictionary utilities
207
+ !-- - [`scitex.str`](./src/scitex/str#readme): String manipulation
208
+ !-- - [`scitex.torch`](./src/scitex/torch#readme): PyTorch utilities
209
+ !--
210
+ !-- #### Data Science
211
+ !-- - [`scitex.plt`](./src/scitex/plt#readme): Plotting with automatic tracking
212
+ !-- - [`scitex.stats`](./src/scitex/stats#readme): Statistical analysis
213
+ !-- - [`scitex.pd`](./src/scitex/pd#readme): Pandas utilities-
214
+ !-- - [`scitex.tex`](./src/scitex/tex#readme): LaTeX utilities
215
+ !--
216
+ !-- #### AI: Machine Learning and Pattern Recognition
217
+ !-- - [`scitex.ai`](./src/scitex/ai#readme): AI and Machine Learning
218
+ !-- - [`scitex.nn`](./src/scitex/nn#readme): Neural Networks
219
+ !-- - [`scitex.torch`](./src/scitex/torch#readme): PyTorch utilities
220
+ !-- - [`scitex.db`](./src/scitex/db#readme): Database operations
221
+ !-- - [`scitex.linalg`](./src/scitex/linalg#readme): Linear algebra
222
+ !--
223
+ !-- #### Signal Processing
224
+ !-- - [`scitex.dsp`](./src/scitex/dsp#readme): Digital Signal Processing
225
+ !--
226
+ !-- #### Statistics
227
+ !-- - [`scitex.stats`](./src/scitex/stats#readme): Statistical analysis tools
228
+ !--
229
+ !-- #### ETC
230
+ !-- - [`scitex.decorators`](./src/scitex/decorators#readme): Function decorators
231
+ !-- - [`scitex.gists`](./src/scitex/gists#readme): Code snippets
232
+ !-- - [`scitex.resource`](./src/scitex/resource#readme): Resource management
233
+ !-- - [`scitex.web`](./src/scitex/web#readme): Web-related functions -->
234
+
235
+ ## 🚀 Quick Start
236
+
237
+ ```python
238
+ import scitex
239
+
240
+ # Start an experiment with automatic logging
241
+ config, info = scitex.gen.start(sys, sdir="./experiments")
242
+
243
+ # Load and process data
244
+ data = scitex.io.load("data.csv")
245
+ processed = scitex.pd.force_df(data)
246
+
247
+ # Signal processing
248
+ signal, time, fs = scitex.dsp.demo_sig(sig_type="chirp")
249
+ filtered = scitex.dsp.filt.bandpass(signal, fs, bands=[[10, 50]])
250
+
251
+ # Machine learning workflow
252
+ reporter = scitex.ai.ClassificationReporter()
253
+ metrics = reporter.evaluate(y_true, y_pred)
254
+
255
+ # Visualization
256
+ fig, ax = scitex.plt.subplots()
257
+ ax.plot(time, signal[0, 0, :])
258
+ scitex.io.save(fig, "signal_plot.png")
259
+
260
+ # Close experiment
261
+ scitex.gen.close(config, info)
262
+ ```
263
+
264
+ ## 📖 Documentation
265
+
266
+ - **[Full Documentation](https://scitex.readthedocs.io/)**: Complete API reference and guides
267
+ - **[Examples](./examples/)**: Practical examples and workflows
268
+ - **[Module List](./docs/scitex_modules.csv)**: Complete list of all functions
269
+
270
+ ## 🤝 Contributing
271
+
272
+ We welcome contributions! Please see our [Contributing Guide](CONTRIBUTING.md) for details.
273
+
274
+ ### Development Setup
275
+ ```bash
276
+ # Clone and install
277
+ git clone https://github.com/ywatanabe1989/SciTeX-Code.git
278
+ cd SciTeX-Code
279
+ make install
280
+
281
+ # Run tests
282
+ make test
283
+
284
+ # Format code
285
+ make format
286
+ ```
287
+
288
+ ## 📊 Project Status
289
+
290
+ - **Test Coverage**: 100% (118/118 tests passing)
291
+ - **Documentation**: Complete for all modules
292
+ - **CI/CD**: Automated testing, linting, and releases
293
+ - **Python Support**: 3.8, 3.9, 3.10, 3.11
294
+
295
+ ## 📄 License
296
+
297
+ This project is licensed under the MIT License - see the [LICENSE](LICENSE) file for details.
298
+
299
+ ## 📧 Contact
300
+
301
+ Yusuke Watanabe (ywatanabe@alumni.u-tokyo.ac.jp)
302
+
303
+ ## 🙏 Acknowledgments
304
+
305
+ Special thanks to all contributors and the open-source community for making this project possible.
306
+
307
+ <!-- EOF -->