scientific-writer 2.3.1__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- scientific_writer/.claude/WRITER.md +822 -0
- scientific_writer/.claude/settings.local.json +30 -0
- scientific_writer/.claude/skills/citation-management/SKILL.md +1046 -0
- scientific_writer/.claude/skills/citation-management/assets/bibtex_template.bib +264 -0
- scientific_writer/.claude/skills/citation-management/assets/citation_checklist.md +386 -0
- scientific_writer/.claude/skills/citation-management/references/bibtex_formatting.md +908 -0
- scientific_writer/.claude/skills/citation-management/references/citation_validation.md +794 -0
- scientific_writer/.claude/skills/citation-management/references/google_scholar_search.md +725 -0
- scientific_writer/.claude/skills/citation-management/references/metadata_extraction.md +870 -0
- scientific_writer/.claude/skills/citation-management/references/pubmed_search.md +839 -0
- scientific_writer/.claude/skills/citation-management/scripts/doi_to_bibtex.py +204 -0
- scientific_writer/.claude/skills/citation-management/scripts/extract_metadata.py +569 -0
- scientific_writer/.claude/skills/citation-management/scripts/format_bibtex.py +349 -0
- scientific_writer/.claude/skills/citation-management/scripts/search_google_scholar.py +282 -0
- scientific_writer/.claude/skills/citation-management/scripts/search_pubmed.py +398 -0
- scientific_writer/.claude/skills/citation-management/scripts/validate_citations.py +497 -0
- scientific_writer/.claude/skills/clinical-reports/IMPLEMENTATION_SUMMARY.md +641 -0
- scientific_writer/.claude/skills/clinical-reports/README.md +236 -0
- scientific_writer/.claude/skills/clinical-reports/SKILL.md +1088 -0
- scientific_writer/.claude/skills/clinical-reports/assets/case_report_template.md +352 -0
- scientific_writer/.claude/skills/clinical-reports/assets/clinical_trial_csr_template.md +353 -0
- scientific_writer/.claude/skills/clinical-reports/assets/clinical_trial_sae_template.md +359 -0
- scientific_writer/.claude/skills/clinical-reports/assets/consult_note_template.md +305 -0
- scientific_writer/.claude/skills/clinical-reports/assets/discharge_summary_template.md +453 -0
- scientific_writer/.claude/skills/clinical-reports/assets/hipaa_compliance_checklist.md +395 -0
- scientific_writer/.claude/skills/clinical-reports/assets/history_physical_template.md +305 -0
- scientific_writer/.claude/skills/clinical-reports/assets/lab_report_template.md +309 -0
- scientific_writer/.claude/skills/clinical-reports/assets/pathology_report_template.md +249 -0
- scientific_writer/.claude/skills/clinical-reports/assets/quality_checklist.md +338 -0
- scientific_writer/.claude/skills/clinical-reports/assets/radiology_report_template.md +318 -0
- scientific_writer/.claude/skills/clinical-reports/assets/soap_note_template.md +253 -0
- scientific_writer/.claude/skills/clinical-reports/references/case_report_guidelines.md +570 -0
- scientific_writer/.claude/skills/clinical-reports/references/clinical_trial_reporting.md +693 -0
- scientific_writer/.claude/skills/clinical-reports/references/data_presentation.md +530 -0
- scientific_writer/.claude/skills/clinical-reports/references/diagnostic_reports_standards.md +629 -0
- scientific_writer/.claude/skills/clinical-reports/references/medical_terminology.md +588 -0
- scientific_writer/.claude/skills/clinical-reports/references/patient_documentation.md +744 -0
- scientific_writer/.claude/skills/clinical-reports/references/peer_review_standards.md +585 -0
- scientific_writer/.claude/skills/clinical-reports/references/regulatory_compliance.md +577 -0
- scientific_writer/.claude/skills/clinical-reports/scripts/check_deidentification.py +346 -0
- scientific_writer/.claude/skills/clinical-reports/scripts/compliance_checker.py +78 -0
- scientific_writer/.claude/skills/clinical-reports/scripts/extract_clinical_data.py +102 -0
- scientific_writer/.claude/skills/clinical-reports/scripts/format_adverse_events.py +103 -0
- scientific_writer/.claude/skills/clinical-reports/scripts/generate_report_template.py +163 -0
- scientific_writer/.claude/skills/clinical-reports/scripts/terminology_validator.py +133 -0
- scientific_writer/.claude/skills/clinical-reports/scripts/validate_case_report.py +334 -0
- scientific_writer/.claude/skills/clinical-reports/scripts/validate_trial_report.py +89 -0
- scientific_writer/.claude/skills/document-skills/docx/LICENSE.txt +30 -0
- scientific_writer/.claude/skills/document-skills/docx/SKILL.md +197 -0
- scientific_writer/.claude/skills/document-skills/docx/docx-js.md +350 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-chart.xsd +1499 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-chartDrawing.xsd +146 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-diagram.xsd +1085 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-lockedCanvas.xsd +11 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-main.xsd +3081 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-picture.xsd +23 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-spreadsheetDrawing.xsd +185 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-wordprocessingDrawing.xsd +287 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/pml.xsd +1676 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-additionalCharacteristics.xsd +28 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-bibliography.xsd +144 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-commonSimpleTypes.xsd +174 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-customXmlDataProperties.xsd +25 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-customXmlSchemaProperties.xsd +18 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesCustom.xsd +59 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesExtended.xsd +56 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesVariantTypes.xsd +195 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-math.xsd +582 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-relationshipReference.xsd +25 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/sml.xsd +4439 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-main.xsd +570 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-officeDrawing.xsd +509 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-presentationDrawing.xsd +12 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-spreadsheetDrawing.xsd +108 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-wordprocessingDrawing.xsd +96 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/wml.xsd +3646 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/xml.xsd +116 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ecma/fouth-edition/opc-contentTypes.xsd +42 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ecma/fouth-edition/opc-coreProperties.xsd +50 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ecma/fouth-edition/opc-digSig.xsd +49 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ecma/fouth-edition/opc-relationships.xsd +33 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/mce/mc.xsd +75 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-2010.xsd +560 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-2012.xsd +67 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-2018.xsd +14 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-cex-2018.xsd +20 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-cid-2016.xsd +13 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-sdtdatahash-2020.xsd +4 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-symex-2015.xsd +8 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/pack.py +159 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/unpack.py +29 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/validate.py +69 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/validation/__init__.py +15 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/validation/base.py +951 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/validation/docx.py +274 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/validation/pptx.py +315 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/validation/redlining.py +279 -0
- scientific_writer/.claude/skills/document-skills/docx/ooxml.md +610 -0
- scientific_writer/.claude/skills/document-skills/docx/scripts/__init__.py +1 -0
- scientific_writer/.claude/skills/document-skills/docx/scripts/document.py +1276 -0
- scientific_writer/.claude/skills/document-skills/docx/scripts/templates/comments.xml +3 -0
- scientific_writer/.claude/skills/document-skills/docx/scripts/templates/commentsExtended.xml +3 -0
- scientific_writer/.claude/skills/document-skills/docx/scripts/templates/commentsExtensible.xml +3 -0
- scientific_writer/.claude/skills/document-skills/docx/scripts/templates/commentsIds.xml +3 -0
- scientific_writer/.claude/skills/document-skills/docx/scripts/templates/people.xml +3 -0
- scientific_writer/.claude/skills/document-skills/docx/scripts/utilities.py +374 -0
- scientific_writer/.claude/skills/document-skills/pdf/LICENSE.txt +30 -0
- scientific_writer/.claude/skills/document-skills/pdf/SKILL.md +294 -0
- scientific_writer/.claude/skills/document-skills/pdf/forms.md +205 -0
- scientific_writer/.claude/skills/document-skills/pdf/reference.md +612 -0
- scientific_writer/.claude/skills/document-skills/pdf/scripts/check_bounding_boxes.py +70 -0
- scientific_writer/.claude/skills/document-skills/pdf/scripts/check_bounding_boxes_test.py +226 -0
- scientific_writer/.claude/skills/document-skills/pdf/scripts/check_fillable_fields.py +12 -0
- scientific_writer/.claude/skills/document-skills/pdf/scripts/convert_pdf_to_images.py +35 -0
- scientific_writer/.claude/skills/document-skills/pdf/scripts/create_validation_image.py +41 -0
- scientific_writer/.claude/skills/document-skills/pdf/scripts/extract_form_field_info.py +152 -0
- scientific_writer/.claude/skills/document-skills/pdf/scripts/fill_fillable_fields.py +114 -0
- scientific_writer/.claude/skills/document-skills/pdf/scripts/fill_pdf_form_with_annotations.py +108 -0
- scientific_writer/.claude/skills/document-skills/pptx/LICENSE.txt +30 -0
- scientific_writer/.claude/skills/document-skills/pptx/SKILL.md +484 -0
- scientific_writer/.claude/skills/document-skills/pptx/html2pptx.md +625 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-chart.xsd +1499 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-chartDrawing.xsd +146 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-diagram.xsd +1085 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-lockedCanvas.xsd +11 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-main.xsd +3081 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-picture.xsd +23 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-spreadsheetDrawing.xsd +185 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-wordprocessingDrawing.xsd +287 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/pml.xsd +1676 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-additionalCharacteristics.xsd +28 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-bibliography.xsd +144 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-commonSimpleTypes.xsd +174 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-customXmlDataProperties.xsd +25 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-customXmlSchemaProperties.xsd +18 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesCustom.xsd +59 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesExtended.xsd +56 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesVariantTypes.xsd +195 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-math.xsd +582 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-relationshipReference.xsd +25 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/sml.xsd +4439 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/vml-main.xsd +570 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/vml-officeDrawing.xsd +509 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/vml-presentationDrawing.xsd +12 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/vml-spreadsheetDrawing.xsd +108 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/vml-wordprocessingDrawing.xsd +96 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/wml.xsd +3646 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/xml.xsd +116 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ecma/fouth-edition/opc-contentTypes.xsd +42 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ecma/fouth-edition/opc-coreProperties.xsd +50 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ecma/fouth-edition/opc-digSig.xsd +49 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ecma/fouth-edition/opc-relationships.xsd +33 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/mce/mc.xsd +75 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-2010.xsd +560 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-2012.xsd +67 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-2018.xsd +14 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-cex-2018.xsd +20 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-cid-2016.xsd +13 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-sdtdatahash-2020.xsd +4 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-symex-2015.xsd +8 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/pack.py +159 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/unpack.py +29 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/validate.py +69 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/validation/__init__.py +15 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/validation/base.py +951 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/validation/docx.py +274 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/validation/pptx.py +315 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/validation/redlining.py +279 -0
- scientific_writer/.claude/skills/document-skills/pptx/ooxml.md +427 -0
- scientific_writer/.claude/skills/document-skills/pptx/scripts/html2pptx.js +979 -0
- scientific_writer/.claude/skills/document-skills/pptx/scripts/inventory.py +1020 -0
- scientific_writer/.claude/skills/document-skills/pptx/scripts/rearrange.py +231 -0
- scientific_writer/.claude/skills/document-skills/pptx/scripts/replace.py +385 -0
- scientific_writer/.claude/skills/document-skills/pptx/scripts/thumbnail.py +450 -0
- scientific_writer/.claude/skills/document-skills/xlsx/LICENSE.txt +30 -0
- scientific_writer/.claude/skills/document-skills/xlsx/SKILL.md +289 -0
- scientific_writer/.claude/skills/document-skills/xlsx/recalc.py +178 -0
- scientific_writer/.claude/skills/hypothesis-generation/SKILL.md +155 -0
- scientific_writer/.claude/skills/hypothesis-generation/assets/hypothesis_output_template.md +302 -0
- scientific_writer/.claude/skills/hypothesis-generation/references/experimental_design_patterns.md +327 -0
- scientific_writer/.claude/skills/hypothesis-generation/references/hypothesis_quality_criteria.md +196 -0
- scientific_writer/.claude/skills/hypothesis-generation/references/literature_search_strategies.md +505 -0
- scientific_writer/.claude/skills/latex-posters/README.md +417 -0
- scientific_writer/.claude/skills/latex-posters/SKILL.md +919 -0
- scientific_writer/.claude/skills/latex-posters/assets/baposter_template.tex +257 -0
- scientific_writer/.claude/skills/latex-posters/assets/beamerposter_template.tex +244 -0
- scientific_writer/.claude/skills/latex-posters/assets/poster_quality_checklist.md +358 -0
- scientific_writer/.claude/skills/latex-posters/assets/tikzposter_template.tex +251 -0
- scientific_writer/.claude/skills/latex-posters/references/latex_poster_packages.md +745 -0
- scientific_writer/.claude/skills/latex-posters/references/poster_content_guide.md +748 -0
- scientific_writer/.claude/skills/latex-posters/references/poster_design_principles.md +806 -0
- scientific_writer/.claude/skills/latex-posters/references/poster_layout_design.md +900 -0
- scientific_writer/.claude/skills/latex-posters/scripts/review_poster.sh +214 -0
- scientific_writer/.claude/skills/literature-review/SKILL.md +546 -0
- scientific_writer/.claude/skills/literature-review/assets/review_template.md +412 -0
- scientific_writer/.claude/skills/literature-review/references/citation_styles.md +166 -0
- scientific_writer/.claude/skills/literature-review/references/database_strategies.md +381 -0
- scientific_writer/.claude/skills/literature-review/scripts/generate_pdf.py +176 -0
- scientific_writer/.claude/skills/literature-review/scripts/search_databases.py +303 -0
- scientific_writer/.claude/skills/literature-review/scripts/verify_citations.py +222 -0
- scientific_writer/.claude/skills/markitdown/INSTALLATION_GUIDE.md +318 -0
- scientific_writer/.claude/skills/markitdown/LICENSE.txt +22 -0
- scientific_writer/.claude/skills/markitdown/OPENROUTER_INTEGRATION.md +359 -0
- scientific_writer/.claude/skills/markitdown/QUICK_REFERENCE.md +309 -0
- scientific_writer/.claude/skills/markitdown/README.md +184 -0
- scientific_writer/.claude/skills/markitdown/SKILL.md +450 -0
- scientific_writer/.claude/skills/markitdown/SKILL_SUMMARY.md +307 -0
- scientific_writer/.claude/skills/markitdown/assets/example_usage.md +463 -0
- scientific_writer/.claude/skills/markitdown/references/api_reference.md +399 -0
- scientific_writer/.claude/skills/markitdown/references/file_formats.md +542 -0
- scientific_writer/.claude/skills/markitdown/scripts/batch_convert.py +228 -0
- scientific_writer/.claude/skills/markitdown/scripts/convert_literature.py +283 -0
- scientific_writer/.claude/skills/markitdown/scripts/convert_with_ai.py +243 -0
- scientific_writer/.claude/skills/paper-2-web/SKILL.md +455 -0
- scientific_writer/.claude/skills/paper-2-web/references/installation.md +141 -0
- scientific_writer/.claude/skills/paper-2-web/references/paper2poster.md +346 -0
- scientific_writer/.claude/skills/paper-2-web/references/paper2video.md +305 -0
- scientific_writer/.claude/skills/paper-2-web/references/paper2web.md +187 -0
- scientific_writer/.claude/skills/paper-2-web/references/usage_examples.md +436 -0
- scientific_writer/.claude/skills/peer-review/SKILL.md +375 -0
- scientific_writer/.claude/skills/peer-review/references/common_issues.md +552 -0
- scientific_writer/.claude/skills/peer-review/references/reporting_standards.md +290 -0
- scientific_writer/.claude/skills/research-grants/README.md +285 -0
- scientific_writer/.claude/skills/research-grants/SKILL.md +896 -0
- scientific_writer/.claude/skills/research-grants/assets/budget_justification_template.md +453 -0
- scientific_writer/.claude/skills/research-grants/assets/nih_specific_aims_template.md +166 -0
- scientific_writer/.claude/skills/research-grants/assets/nsf_project_summary_template.md +92 -0
- scientific_writer/.claude/skills/research-grants/references/broader_impacts.md +392 -0
- scientific_writer/.claude/skills/research-grants/references/darpa_guidelines.md +636 -0
- scientific_writer/.claude/skills/research-grants/references/doe_guidelines.md +586 -0
- scientific_writer/.claude/skills/research-grants/references/nih_guidelines.md +851 -0
- scientific_writer/.claude/skills/research-grants/references/nsf_guidelines.md +570 -0
- scientific_writer/.claude/skills/research-grants/references/specific_aims_guide.md +458 -0
- scientific_writer/.claude/skills/research-lookup/README.md +116 -0
- scientific_writer/.claude/skills/research-lookup/SKILL.md +443 -0
- scientific_writer/.claude/skills/research-lookup/examples.py +174 -0
- scientific_writer/.claude/skills/research-lookup/lookup.py +93 -0
- scientific_writer/.claude/skills/research-lookup/research_lookup.py +335 -0
- scientific_writer/.claude/skills/research-lookup/scripts/research_lookup.py +261 -0
- scientific_writer/.claude/skills/scholar-evaluation/SKILL.md +254 -0
- scientific_writer/.claude/skills/scholar-evaluation/references/evaluation_framework.md +663 -0
- scientific_writer/.claude/skills/scholar-evaluation/scripts/calculate_scores.py +378 -0
- scientific_writer/.claude/skills/scientific-critical-thinking/SKILL.md +530 -0
- scientific_writer/.claude/skills/scientific-critical-thinking/references/common_biases.md +364 -0
- scientific_writer/.claude/skills/scientific-critical-thinking/references/evidence_hierarchy.md +484 -0
- scientific_writer/.claude/skills/scientific-critical-thinking/references/experimental_design.md +496 -0
- scientific_writer/.claude/skills/scientific-critical-thinking/references/logical_fallacies.md +478 -0
- scientific_writer/.claude/skills/scientific-critical-thinking/references/scientific_method.md +169 -0
- scientific_writer/.claude/skills/scientific-critical-thinking/references/statistical_pitfalls.md +506 -0
- scientific_writer/.claude/skills/scientific-schematics/SKILL.md +2035 -0
- scientific_writer/.claude/skills/scientific-schematics/assets/block_diagram_template.tex +199 -0
- scientific_writer/.claude/skills/scientific-schematics/assets/circuit_template.tex +159 -0
- scientific_writer/.claude/skills/scientific-schematics/assets/flowchart_template.tex +161 -0
- scientific_writer/.claude/skills/scientific-schematics/assets/pathway_template.tex +162 -0
- scientific_writer/.claude/skills/scientific-schematics/assets/tikz_styles.tex +422 -0
- scientific_writer/.claude/skills/scientific-schematics/references/best_practices.md +562 -0
- scientific_writer/.claude/skills/scientific-schematics/references/diagram_types.md +637 -0
- scientific_writer/.claude/skills/scientific-schematics/references/python_libraries.md +791 -0
- scientific_writer/.claude/skills/scientific-schematics/references/tikz_guide.md +734 -0
- scientific_writer/.claude/skills/scientific-schematics/scripts/circuit_generator.py +307 -0
- scientific_writer/.claude/skills/scientific-schematics/scripts/compile_tikz.py +292 -0
- scientific_writer/.claude/skills/scientific-schematics/scripts/generate_flowchart.py +281 -0
- scientific_writer/.claude/skills/scientific-schematics/scripts/pathway_diagram.py +406 -0
- scientific_writer/.claude/skills/scientific-writing/SKILL.md +443 -0
- scientific_writer/.claude/skills/scientific-writing/references/citation_styles.md +720 -0
- scientific_writer/.claude/skills/scientific-writing/references/figures_tables.md +806 -0
- scientific_writer/.claude/skills/scientific-writing/references/imrad_structure.md +658 -0
- scientific_writer/.claude/skills/scientific-writing/references/reporting_guidelines.md +748 -0
- scientific_writer/.claude/skills/scientific-writing/references/writing_principles.md +824 -0
- scientific_writer/.claude/skills/treatment-plans/README.md +488 -0
- scientific_writer/.claude/skills/treatment-plans/SKILL.md +1536 -0
- scientific_writer/.claude/skills/treatment-plans/assets/STYLING_QUICK_REFERENCE.md +185 -0
- scientific_writer/.claude/skills/treatment-plans/assets/chronic_disease_management_plan.tex +665 -0
- scientific_writer/.claude/skills/treatment-plans/assets/general_medical_treatment_plan.tex +547 -0
- scientific_writer/.claude/skills/treatment-plans/assets/medical_treatment_plan.sty +222 -0
- scientific_writer/.claude/skills/treatment-plans/assets/mental_health_treatment_plan.tex +774 -0
- scientific_writer/.claude/skills/treatment-plans/assets/one_page_treatment_plan.tex +193 -0
- scientific_writer/.claude/skills/treatment-plans/assets/pain_management_plan.tex +799 -0
- scientific_writer/.claude/skills/treatment-plans/assets/perioperative_care_plan.tex +753 -0
- scientific_writer/.claude/skills/treatment-plans/assets/quality_checklist.md +471 -0
- scientific_writer/.claude/skills/treatment-plans/assets/rehabilitation_treatment_plan.tex +756 -0
- scientific_writer/.claude/skills/treatment-plans/references/goal_setting_frameworks.md +411 -0
- scientific_writer/.claude/skills/treatment-plans/references/intervention_guidelines.md +507 -0
- scientific_writer/.claude/skills/treatment-plans/references/regulatory_compliance.md +476 -0
- scientific_writer/.claude/skills/treatment-plans/references/specialty_specific_guidelines.md +655 -0
- scientific_writer/.claude/skills/treatment-plans/references/treatment_plan_standards.md +485 -0
- scientific_writer/.claude/skills/treatment-plans/scripts/check_completeness.py +318 -0
- scientific_writer/.claude/skills/treatment-plans/scripts/generate_template.py +244 -0
- scientific_writer/.claude/skills/treatment-plans/scripts/timeline_generator.py +369 -0
- scientific_writer/.claude/skills/treatment-plans/scripts/validate_treatment_plan.py +367 -0
- scientific_writer/.claude/skills/venue-templates/SKILL.md +590 -0
- scientific_writer/.claude/skills/venue-templates/assets/grants/nih_specific_aims.tex +235 -0
- scientific_writer/.claude/skills/venue-templates/assets/grants/nsf_proposal_template.tex +375 -0
- scientific_writer/.claude/skills/venue-templates/assets/journals/nature_article.tex +171 -0
- scientific_writer/.claude/skills/venue-templates/assets/journals/neurips_article.tex +283 -0
- scientific_writer/.claude/skills/venue-templates/assets/journals/plos_one.tex +317 -0
- scientific_writer/.claude/skills/venue-templates/assets/posters/beamerposter_academic.tex +311 -0
- scientific_writer/.claude/skills/venue-templates/references/conferences_formatting.md +564 -0
- scientific_writer/.claude/skills/venue-templates/references/grants_requirements.md +787 -0
- scientific_writer/.claude/skills/venue-templates/references/journals_formatting.md +486 -0
- scientific_writer/.claude/skills/venue-templates/references/posters_guidelines.md +628 -0
- scientific_writer/.claude/skills/venue-templates/scripts/customize_template.py +206 -0
- scientific_writer/.claude/skills/venue-templates/scripts/query_template.py +260 -0
- scientific_writer/.claude/skills/venue-templates/scripts/validate_format.py +255 -0
- scientific_writer/__init__.py +43 -0
- scientific_writer/api.py +393 -0
- scientific_writer/cli.py +326 -0
- scientific_writer/core.py +275 -0
- scientific_writer/models.py +76 -0
- scientific_writer/utils.py +289 -0
- scientific_writer-2.3.1.dist-info/METADATA +272 -0
- scientific_writer-2.3.1.dist-info/RECORD +315 -0
- scientific_writer-2.3.1.dist-info/WHEEL +4 -0
- scientific_writer-2.3.1.dist-info/entry_points.txt +2 -0
- scientific_writer-2.3.1.dist-info/licenses/LICENSE +22 -0
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# LaTeX Poster Packages: Comprehensive Comparison
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## Overview
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Three major LaTeX packages dominate research poster creation: beamerposter, tikzposter, and baposter. Each has distinct strengths, syntax, and use cases. This guide provides detailed comparisons and practical examples.
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## Package Comparison Matrix
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| Feature | beamerposter | tikzposter | baposter |
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|---------|--------------|------------|----------|
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| **Learning Curve** | Easy (if familiar with Beamer) | Moderate | Moderate |
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| **Flexibility** | Moderate | High | Moderate-High |
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| **Default Aesthetics** | Traditional/Academic | Modern/Colorful | Professional/Clean |
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| **Theme Support** | Extensive (Beamer themes) | Built-in + Custom | Limited built-in |
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| **Customization** | Moderate effort | Easy with TikZ | Structured approach |
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| **Layout System** | Frame-based | Block-based | Box-based with grid |
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| **Multi-column** | Manual | Automatic | Automatic |
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| **Graphics Integration** | Standard includegraphics | TikZ + includegraphics | Standard + advanced |
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| **Community Support** | Large (Beamer community) | Growing | Smaller |
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| **Best For** | Traditional academic, institutional branding | Creative designs, custom graphics | Structured multi-column layouts |
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| **File Size** | Small | Medium-Large (TikZ overhead) | Medium |
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| **Compilation Speed** | Fast | Slower (TikZ processing) | Fast-Medium |
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## 1. beamerposter
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### Overview
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beamerposter extends the popular Beamer presentation class for poster-sized documents. It inherits all Beamer functionality, themes, and customization options.
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### Advantages
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- **Familiar syntax**: If you know Beamer, you know beamerposter
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- **Extensive themes**: Access to all Beamer themes and color schemes
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- **Institutional branding**: Easy to match university templates
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- **Stable and mature**: Well-tested, extensive documentation
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- **Block structure**: Clear organizational units
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- **Good for traditional posters**: Academic conferences, thesis defenses
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### Disadvantages
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- **Less flexible layouts**: Column-based system can be restrictive
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- **Manual positioning**: Requires careful spacing adjustments
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- **Traditional aesthetics**: Can look dated compared to modern designs
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- **Limited built-in styling**: Requires theme customization for unique looks
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### Basic Template
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```latex
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\documentclass[final,t]{beamer}
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\usepackage[size=a0,scale=1.4,orientation=portrait]{beamerposter}
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\usetheme{Berlin}
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\usecolortheme{beaver}
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% Configure fonts
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\setbeamerfont{title}{size=\VeryHuge,series=\bfseries}
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\setbeamerfont{author}{size=\Large}
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\setbeamerfont{block title}{size=\large,series=\bfseries}
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\title{Your Research Title}
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\author{Author Names}
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\institute{Institution}
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\begin{document}
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\begin{frame}[t]
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% Title block
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\begin{block}{}
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\maketitle
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\begin{columns}[t]
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\begin{column}{.45\linewidth}
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\begin{block}{Introduction}
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Your introduction text here...
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\begin{block}{Methods}
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Your methods text here...
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\begin{column}{.45\linewidth}
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\begin{block}{Results}
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Your results text here...
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\begin{block}{Conclusions}
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Your conclusions here...
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\end{document}
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```
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### Popular Themes
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```latex
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% Traditional academic
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\usetheme{Berlin}
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\usecolortheme{beaver}
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% Modern minimal
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\usetheme{Madrid}
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% Blue professional
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\usetheme{Singapore}
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% Dark theme
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\usetheme{Warsaw}
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```
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### Custom Colors
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```latex
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% Define custom colors
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\definecolor{primarycolor}{RGB}{0,51,102} % Dark blue
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```
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### Advanced Customization
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```latex
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% Remove navigation symbols
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% Custom title formatting
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\setbeamertemplate{title page}{
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\begin{center}
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{\usebeamerfont{institute}\insertinstitute}
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\end{center}
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}
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% Custom block style
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\par\vskip\medskipamount
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{\parskip0pt\par}
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}
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```
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### Three-Column Layout
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```latex
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\begin{columns}[t]
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\begin{column}{.3\linewidth}
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% Right column content
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```
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## 2. tikzposter
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### Overview
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tikzposter is built on the powerful TikZ graphics package, offering modern designs with extensive customization through TikZ commands.
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### Advantages
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- **Modern aesthetics**: Contemporary, colorful designs out-of-the-box
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- **Flexible block placement**: Easy positioning anywhere on poster
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- **Beautiful themes**: Multiple professionally designed themes included
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- **TikZ integration**: Seamless graphics and custom drawings
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- **Color customization**: Easy to create custom color palettes
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- **Automatic spacing**: Intelligent block spacing and alignment
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### Disadvantages
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- **Compilation time**: TikZ processing can be slow for large posters
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- **File size**: PDFs can be larger due to TikZ elements
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- **Learning curve**: TikZ syntax can be complex for advanced customization
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- **Less institutional theme support**: Requires more work to match branding
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### Basic Template
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```latex
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\documentclass[25pt, a0paper, portrait, margin=0mm, innermargin=15mm,
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blockverticalspace=15mm, colspace=15mm, subcolspace=8mm]{tikzposter}
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\title{Your Research Title}
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\author{Author Names}
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\institute{Institution}
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% Choose theme and color style
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\usetheme{Rays}
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\usecolorstyle{Denmark}
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214
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+
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\begin{document}
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+
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+
\maketitle
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+
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+
% First column
|
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+
\begin{columns}
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+
\column{0.5}
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+
|
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223
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+
\block{Introduction}{
|
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+
Your introduction text here...
|
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+
}
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+
|
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+
\block{Methods}{
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|
+
Your methods text here...
|
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+
}
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+
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231
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+
% Second column
|
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232
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+
\column{0.5}
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+
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234
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+
\block{Results}{
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235
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+
Your results text here...
|
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+
\begin{tikzfigure}
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+
\includegraphics[width=0.9\linewidth]{figure.pdf}
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\end{tikzfigure}
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+
}
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+
|
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241
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+
\block{Conclusions}{
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+
Your conclusions here...
|
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+
}
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+
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+
\end{columns}
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+
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+
\end{document}
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+
```
|
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249
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+
|
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250
|
+
### Available Themes
|
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+
|
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252
|
+
```latex
|
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253
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+
% Modern with radiating background
|
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254
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+
\usetheme{Rays}
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255
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+
|
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256
|
+
% Clean with decorative wave
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257
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+
\usetheme{Wave}
|
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258
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+
|
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259
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+
% Minimal with envelope corners
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260
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+
\usetheme{Envelope}
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261
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+
|
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262
|
+
% Traditional academic
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263
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+
\usetheme{Basic}
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+
|
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265
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+
% Board-style with texture
|
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266
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+
\usetheme{Board}
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267
|
+
|
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268
|
+
% Clean minimal
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269
|
+
\usetheme{Simple}
|
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270
|
+
|
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271
|
+
% Professional with lines
|
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272
|
+
\usetheme{Default}
|
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273
|
+
|
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274
|
+
% Autumn color scheme
|
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275
|
+
\usetheme{Autumn}
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276
|
+
|
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277
|
+
% Desert color palette
|
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278
|
+
\usetheme{Desert}
|
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279
|
+
```
|
|
280
|
+
|
|
281
|
+
### Color Styles
|
|
282
|
+
|
|
283
|
+
```latex
|
|
284
|
+
% Professional blue
|
|
285
|
+
\usecolorstyle{Denmark}
|
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286
|
+
|
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287
|
+
% Warm colors
|
|
288
|
+
\usecolorstyle{Australia}
|
|
289
|
+
|
|
290
|
+
% Cool tones
|
|
291
|
+
\usecolorstyle{Sweden}
|
|
292
|
+
|
|
293
|
+
% Earth tones
|
|
294
|
+
\usecolorstyle{Britain}
|
|
295
|
+
|
|
296
|
+
% Default color scheme
|
|
297
|
+
\usecolorstyle{Default}
|
|
298
|
+
```
|
|
299
|
+
|
|
300
|
+
### Custom Color Definition
|
|
301
|
+
|
|
302
|
+
```latex
|
|
303
|
+
\definecolorstyle{CustomStyle}{
|
|
304
|
+
\definecolor{colorOne}{RGB}{0,51,102} % Dark blue
|
|
305
|
+
\definecolor{colorTwo}{RGB}{255,204,0} % Gold
|
|
306
|
+
\definecolor{colorThree}{RGB}{204,0,0} % Red
|
|
307
|
+
}{
|
|
308
|
+
% Background Colors
|
|
309
|
+
\colorlet{backgroundcolor}{white}
|
|
310
|
+
\colorlet{framecolor}{colorOne}
|
|
311
|
+
% Title Colors
|
|
312
|
+
\colorlet{titlefgcolor}{white}
|
|
313
|
+
\colorlet{titlebgcolor}{colorOne}
|
|
314
|
+
% Block Colors
|
|
315
|
+
\colorlet{blocktitlebgcolor}{colorOne}
|
|
316
|
+
\colorlet{blocktitlefgcolor}{white}
|
|
317
|
+
\colorlet{blockbodybgcolor}{white}
|
|
318
|
+
\colorlet{blockbodyfgcolor}{black}
|
|
319
|
+
% Innerblock Colors
|
|
320
|
+
\colorlet{innerblocktitlebgcolor}{colorTwo}
|
|
321
|
+
\colorlet{innerblocktitlefgcolor}{black}
|
|
322
|
+
\colorlet{innerblockbodybgcolor}{colorTwo!10}
|
|
323
|
+
\colorlet{innerblockbodyfgcolor}{black}
|
|
324
|
+
% Note colors
|
|
325
|
+
\colorlet{notefgcolor}{black}
|
|
326
|
+
\colorlet{notebgcolor}{colorThree!20}
|
|
327
|
+
}
|
|
328
|
+
|
|
329
|
+
\usecolorstyle{CustomStyle}
|
|
330
|
+
```
|
|
331
|
+
|
|
332
|
+
### Block Placement and Sizing
|
|
333
|
+
|
|
334
|
+
```latex
|
|
335
|
+
% Full-width block
|
|
336
|
+
\block{Title}{Content}
|
|
337
|
+
|
|
338
|
+
% Specify width
|
|
339
|
+
\block[width=0.8\linewidth]{Title}{Content}
|
|
340
|
+
|
|
341
|
+
% Position manually
|
|
342
|
+
\block[x=10, y=50, width=30]{Title}{Content}
|
|
343
|
+
|
|
344
|
+
% Inner blocks (nested, different styling)
|
|
345
|
+
\block{Outer Title}{
|
|
346
|
+
\innerblock{Inner Title}{
|
|
347
|
+
Highlighted content
|
|
348
|
+
}
|
|
349
|
+
}
|
|
350
|
+
|
|
351
|
+
% Note blocks (for emphasis)
|
|
352
|
+
\note[width=0.4\linewidth]{
|
|
353
|
+
Important note text
|
|
354
|
+
}
|
|
355
|
+
```
|
|
356
|
+
|
|
357
|
+
### Advanced Features
|
|
358
|
+
|
|
359
|
+
```latex
|
|
360
|
+
% QR codes with tikzposter styling
|
|
361
|
+
\block{Scan for More}{
|
|
362
|
+
\begin{center}
|
|
363
|
+
\qrcode[height=5cm]{https://github.com/project}\\
|
|
364
|
+
\vspace{0.5cm}
|
|
365
|
+
Visit our GitHub repository
|
|
366
|
+
\end{center}
|
|
367
|
+
}
|
|
368
|
+
|
|
369
|
+
% Multi-column within block
|
|
370
|
+
\block{Results}{
|
|
371
|
+
\begin{tabular}{cc}
|
|
372
|
+
\includegraphics[width=0.45\linewidth]{fig1.pdf} &
|
|
373
|
+
\includegraphics[width=0.45\linewidth]{fig2.pdf}
|
|
374
|
+
\end{tabular}
|
|
375
|
+
}
|
|
376
|
+
|
|
377
|
+
% Custom TikZ graphics
|
|
378
|
+
\block{Methodology}{
|
|
379
|
+
\begin{tikzpicture}
|
|
380
|
+
\node[draw, rectangle, fill=blue!20] (A) {Step 1};
|
|
381
|
+
\node[draw, rectangle, fill=green!20, right=of A] (B) {Step 2};
|
|
382
|
+
\draw[->, thick] (A) -- (B);
|
|
383
|
+
\end{tikzpicture}
|
|
384
|
+
}
|
|
385
|
+
```
|
|
386
|
+
|
|
387
|
+
## 3. baposter
|
|
388
|
+
|
|
389
|
+
### Overview
|
|
390
|
+
|
|
391
|
+
baposter (Box Area Poster) uses a box-based layout system with automatic positioning and spacing. Excellent for structured, professional multi-column layouts.
|
|
392
|
+
|
|
393
|
+
### Advantages
|
|
394
|
+
|
|
395
|
+
- **Automatic layout**: Intelligent box positioning and spacing
|
|
396
|
+
- **Professional defaults**: Clean, polished appearance out-of-the-box
|
|
397
|
+
- **Multi-column excellence**: Best-in-class column-based layouts
|
|
398
|
+
- **Header/footer boxes**: Easy institutional branding
|
|
399
|
+
- **Consistent spacing**: Automatic vertical and horizontal alignment
|
|
400
|
+
- **Print-ready**: Excellent CMYK support
|
|
401
|
+
|
|
402
|
+
### Disadvantages
|
|
403
|
+
|
|
404
|
+
- **Less flexible**: Box-based system can be constraining
|
|
405
|
+
- **Fewer themes**: Limited built-in theme options
|
|
406
|
+
- **Learning curve**: Unique syntax requires time to master
|
|
407
|
+
- **Less active development**: Smaller community compared to others
|
|
408
|
+
|
|
409
|
+
### Basic Template
|
|
410
|
+
|
|
411
|
+
```latex
|
|
412
|
+
\documentclass[a0paper,portrait]{baposter}
|
|
413
|
+
|
|
414
|
+
\usepackage{graphicx}
|
|
415
|
+
\usepackage{multicol}
|
|
416
|
+
|
|
417
|
+
\begin{document}
|
|
418
|
+
|
|
419
|
+
\begin{poster}{
|
|
420
|
+
% Options
|
|
421
|
+
grid=false,
|
|
422
|
+
columns=3,
|
|
423
|
+
colspacing=1em,
|
|
424
|
+
bgColorOne=white,
|
|
425
|
+
bgColorTwo=white,
|
|
426
|
+
borderColor=blue!50,
|
|
427
|
+
headerColorOne=blue!80,
|
|
428
|
+
headerColorTwo=blue!70,
|
|
429
|
+
headerFontColor=white,
|
|
430
|
+
boxColorOne=white,
|
|
431
|
+
boxColorTwo=blue!10,
|
|
432
|
+
textborder=roundedleft,
|
|
433
|
+
eyecatcher=true,
|
|
434
|
+
headerborder=open,
|
|
435
|
+
headerheight=0.12\textheight,
|
|
436
|
+
headershape=roundedright,
|
|
437
|
+
headershade=plain,
|
|
438
|
+
headerfont=\Large\sf\bf,
|
|
439
|
+
linewidth=2pt
|
|
440
|
+
}
|
|
441
|
+
% Eye Catcher (Logo)
|
|
442
|
+
{
|
|
443
|
+
\includegraphics[height=6em]{logo.pdf}
|
|
444
|
+
}
|
|
445
|
+
% Title
|
|
446
|
+
{
|
|
447
|
+
Your Research Title
|
|
448
|
+
}
|
|
449
|
+
% Authors
|
|
450
|
+
{
|
|
451
|
+
Author Names\\
|
|
452
|
+
Institution Name
|
|
453
|
+
}
|
|
454
|
+
% University Logo
|
|
455
|
+
{
|
|
456
|
+
\includegraphics[height=6em]{university-logo.pdf}
|
|
457
|
+
}
|
|
458
|
+
|
|
459
|
+
% First column boxes
|
|
460
|
+
\headerbox{Introduction}{name=intro,column=0,row=0}{
|
|
461
|
+
Your introduction text here...
|
|
462
|
+
}
|
|
463
|
+
|
|
464
|
+
\headerbox{Methods}{name=methods,column=0,below=intro}{
|
|
465
|
+
Your methods text here...
|
|
466
|
+
}
|
|
467
|
+
|
|
468
|
+
% Second column boxes
|
|
469
|
+
\headerbox{Results}{name=results,column=1,row=0,span=2}{
|
|
470
|
+
Your results here...
|
|
471
|
+
\includegraphics[width=0.9\linewidth]{results.pdf}
|
|
472
|
+
}
|
|
473
|
+
|
|
474
|
+
\headerbox{Analysis}{name=analysis,column=1,below=results}{
|
|
475
|
+
Analysis details...
|
|
476
|
+
}
|
|
477
|
+
|
|
478
|
+
\headerbox{Validation}{name=validation,column=2,below=results}{
|
|
479
|
+
Validation results...
|
|
480
|
+
}
|
|
481
|
+
|
|
482
|
+
% Bottom spanning box
|
|
483
|
+
\headerbox{Conclusions}{name=conclusions,column=0,span=3,above=bottom}{
|
|
484
|
+
Your conclusions here...
|
|
485
|
+
}
|
|
486
|
+
|
|
487
|
+
\end{poster}
|
|
488
|
+
\end{document}
|
|
489
|
+
```
|
|
490
|
+
|
|
491
|
+
### Box Positioning
|
|
492
|
+
|
|
493
|
+
```latex
|
|
494
|
+
% Position by column and row
|
|
495
|
+
\headerbox{Title}{name=box1, column=0, row=0}{Content}
|
|
496
|
+
|
|
497
|
+
% Position relative to other boxes
|
|
498
|
+
\headerbox{Title}{name=box2, column=0, below=box1}{Content}
|
|
499
|
+
|
|
500
|
+
% Above another box
|
|
501
|
+
\headerbox{Title}{name=box3, column=1, above=bottom}{Content}
|
|
502
|
+
|
|
503
|
+
% Span multiple columns
|
|
504
|
+
\headerbox{Title}{name=box4, column=0, span=2, row=0}{Content}
|
|
505
|
+
|
|
506
|
+
% Between two boxes vertically
|
|
507
|
+
\headerbox{Title}{name=box5, column=0, below=box1, above=box3}{Content}
|
|
508
|
+
|
|
509
|
+
% Aligned with another box
|
|
510
|
+
\headerbox{Title}{name=box6, column=1, aligned=box1}{Content}
|
|
511
|
+
```
|
|
512
|
+
|
|
513
|
+
### Styling Options
|
|
514
|
+
|
|
515
|
+
```latex
|
|
516
|
+
\begin{poster}{
|
|
517
|
+
% Grid and layout
|
|
518
|
+
grid=false, % Show layout grid (debug)
|
|
519
|
+
columns=3, % Number of columns
|
|
520
|
+
colspacing=1em, % Space between columns
|
|
521
|
+
|
|
522
|
+
% Background
|
|
523
|
+
background=plain, % plain, shadetb, shadelr, user
|
|
524
|
+
bgColorOne=white,
|
|
525
|
+
bgColorTwo=lightgray,
|
|
526
|
+
|
|
527
|
+
% Borders
|
|
528
|
+
borderColor=blue!50,
|
|
529
|
+
linewidth=2pt,
|
|
530
|
+
|
|
531
|
+
% Header
|
|
532
|
+
headerColorOne=blue!80,
|
|
533
|
+
headerColorTwo=blue!70,
|
|
534
|
+
headerFontColor=white,
|
|
535
|
+
headerheight=0.12\textheight,
|
|
536
|
+
headershape=roundedright, % rectangle, rounded, roundedright, roundedleft
|
|
537
|
+
headershade=plain, % plain, shadetb, shadelr
|
|
538
|
+
headerborder=open, % open, closed
|
|
539
|
+
|
|
540
|
+
% Boxes
|
|
541
|
+
boxColorOne=white,
|
|
542
|
+
boxColorTwo=blue!10,
|
|
543
|
+
boxshade=plain, % plain, shadetb, shadelr
|
|
544
|
+
textborder=roundedleft, % none, rectangle, rounded, roundedleft, roundedright
|
|
545
|
+
|
|
546
|
+
% Eye catcher
|
|
547
|
+
eyecatcher=true
|
|
548
|
+
}
|
|
549
|
+
```
|
|
550
|
+
|
|
551
|
+
### Color Schemes
|
|
552
|
+
|
|
553
|
+
```latex
|
|
554
|
+
% Professional blue
|
|
555
|
+
\begin{poster}{
|
|
556
|
+
headerColorOne=blue!80,
|
|
557
|
+
headerColorTwo=blue!70,
|
|
558
|
+
boxColorTwo=blue!10,
|
|
559
|
+
borderColor=blue!50
|
|
560
|
+
}
|
|
561
|
+
|
|
562
|
+
% Academic green
|
|
563
|
+
\begin{poster}{
|
|
564
|
+
headerColorOne=green!70!black,
|
|
565
|
+
headerColorTwo=green!60!black,
|
|
566
|
+
boxColorTwo=green!10,
|
|
567
|
+
borderColor=green!50
|
|
568
|
+
}
|
|
569
|
+
|
|
570
|
+
% Corporate gray
|
|
571
|
+
\begin{poster}{
|
|
572
|
+
headerColorOne=gray!60,
|
|
573
|
+
headerColorTwo=gray!50,
|
|
574
|
+
boxColorTwo=gray!10,
|
|
575
|
+
borderColor=gray!40
|
|
576
|
+
}
|
|
577
|
+
```
|
|
578
|
+
|
|
579
|
+
## Package Selection Guide
|
|
580
|
+
|
|
581
|
+
### Choose beamerposter if:
|
|
582
|
+
- ✅ You're already familiar with Beamer
|
|
583
|
+
- ✅ You need to match institutional Beamer themes
|
|
584
|
+
- ✅ You prefer traditional academic aesthetics
|
|
585
|
+
- ✅ You want extensive theme options
|
|
586
|
+
- ✅ You need fast compilation times
|
|
587
|
+
- ✅ You're creating posters for conservative academic conferences
|
|
588
|
+
|
|
589
|
+
### Choose tikzposter if:
|
|
590
|
+
- ✅ You want modern, colorful designs
|
|
591
|
+
- ✅ You plan to create custom graphics with TikZ
|
|
592
|
+
- ✅ You value aesthetic flexibility
|
|
593
|
+
- ✅ You want built-in professional themes
|
|
594
|
+
- ✅ You don't mind slightly longer compilation
|
|
595
|
+
- ✅ You're presenting at design-conscious or public-facing events
|
|
596
|
+
|
|
597
|
+
### Choose baposter if:
|
|
598
|
+
- ✅ You need structured multi-column layouts
|
|
599
|
+
- ✅ You want automatic box positioning
|
|
600
|
+
- ✅ You prefer clean, professional defaults
|
|
601
|
+
- ✅ You need precise control over box relationships
|
|
602
|
+
- ✅ You're creating posters with many sections
|
|
603
|
+
- ✅ You value consistent spacing and alignment
|
|
604
|
+
|
|
605
|
+
## Conversion Between Packages
|
|
606
|
+
|
|
607
|
+
### From beamerposter to tikzposter
|
|
608
|
+
|
|
609
|
+
```latex
|
|
610
|
+
% beamerposter
|
|
611
|
+
\begin{block}{Title}
|
|
612
|
+
Content
|
|
613
|
+
\end{block}
|
|
614
|
+
|
|
615
|
+
% tikzposter equivalent
|
|
616
|
+
\block{Title}{
|
|
617
|
+
Content
|
|
618
|
+
}
|
|
619
|
+
```
|
|
620
|
+
|
|
621
|
+
### From beamerposter to baposter
|
|
622
|
+
|
|
623
|
+
```latex
|
|
624
|
+
% beamerposter
|
|
625
|
+
\begin{block}{Introduction}
|
|
626
|
+
Content
|
|
627
|
+
\end{block}
|
|
628
|
+
|
|
629
|
+
% baposter equivalent
|
|
630
|
+
\headerbox{Introduction}{name=intro, column=0, row=0}{
|
|
631
|
+
Content
|
|
632
|
+
}
|
|
633
|
+
```
|
|
634
|
+
|
|
635
|
+
### From tikzposter to baposter
|
|
636
|
+
|
|
637
|
+
```latex
|
|
638
|
+
% tikzposter
|
|
639
|
+
\block{Methods}{
|
|
640
|
+
Content
|
|
641
|
+
}
|
|
642
|
+
|
|
643
|
+
% baposter equivalent
|
|
644
|
+
\headerbox{Methods}{name=methods, column=0, row=0}{
|
|
645
|
+
Content
|
|
646
|
+
}
|
|
647
|
+
```
|
|
648
|
+
|
|
649
|
+
## Compilation Tips
|
|
650
|
+
|
|
651
|
+
### Faster Compilation
|
|
652
|
+
|
|
653
|
+
```bash
|
|
654
|
+
# Use draft mode for initial edits
|
|
655
|
+
\documentclass[draft]{tikzposter}
|
|
656
|
+
|
|
657
|
+
# Compile with faster engines when possible
|
|
658
|
+
pdflatex -interaction=nonstopmode poster.tex
|
|
659
|
+
|
|
660
|
+
# For tikzposter, use externalization to cache TikZ graphics
|
|
661
|
+
\usetikzlibrary{external}
|
|
662
|
+
\tikzexternalize
|
|
663
|
+
```
|
|
664
|
+
|
|
665
|
+
### Memory Issues
|
|
666
|
+
|
|
667
|
+
```latex
|
|
668
|
+
% Increase TeX memory for large posters
|
|
669
|
+
% Add to poster preamble:
|
|
670
|
+
\pdfminorversion=7
|
|
671
|
+
\pdfobjcompresslevel=2
|
|
672
|
+
```
|
|
673
|
+
|
|
674
|
+
### Font Embedding
|
|
675
|
+
|
|
676
|
+
```bash
|
|
677
|
+
# Ensure fonts are embedded (required for printing)
|
|
678
|
+
pdflatex -dEmbedAllFonts=true poster.tex
|
|
679
|
+
|
|
680
|
+
# Check font embedding
|
|
681
|
+
pdffonts poster.pdf
|
|
682
|
+
```
|
|
683
|
+
|
|
684
|
+
## Hybrid Approaches
|
|
685
|
+
|
|
686
|
+
You can combine strengths of different packages:
|
|
687
|
+
|
|
688
|
+
### beamerposter with TikZ Graphics
|
|
689
|
+
|
|
690
|
+
```latex
|
|
691
|
+
\documentclass[final]{beamer}
|
|
692
|
+
\usepackage[size=a0]{beamerposter}
|
|
693
|
+
\usepackage{tikz}
|
|
694
|
+
|
|
695
|
+
\begin{block}{Flowchart}
|
|
696
|
+
\begin{tikzpicture}
|
|
697
|
+
% Custom TikZ graphics within beamerposter
|
|
698
|
+
\end{tikzpicture}
|
|
699
|
+
\end{block}
|
|
700
|
+
```
|
|
701
|
+
|
|
702
|
+
### tikzposter with Beamer Themes
|
|
703
|
+
|
|
704
|
+
```latex
|
|
705
|
+
\documentclass{tikzposter}
|
|
706
|
+
|
|
707
|
+
% Import specific Beamer color definitions
|
|
708
|
+
\definecolor{beamerblue}{RGB}{0,51,102}
|
|
709
|
+
\colorlet{blocktitlebgcolor}{beamerblue}
|
|
710
|
+
```
|
|
711
|
+
|
|
712
|
+
## Recommended Packages for All Systems
|
|
713
|
+
|
|
714
|
+
```latex
|
|
715
|
+
% Essential packages for any poster
|
|
716
|
+
\usepackage{graphicx} % Images
|
|
717
|
+
\usepackage{amsmath,amssymb} % Math symbols
|
|
718
|
+
\usepackage{booktabs} % Professional tables
|
|
719
|
+
\usepackage{multicol} % Multiple columns in text
|
|
720
|
+
\usepackage{qrcode} % QR codes
|
|
721
|
+
\usepackage{hyperref} % Hyperlinks
|
|
722
|
+
\usepackage{caption} % Caption customization
|
|
723
|
+
\usepackage{subcaption} % Subfigures
|
|
724
|
+
```
|
|
725
|
+
|
|
726
|
+
## Performance Comparison
|
|
727
|
+
|
|
728
|
+
| Package | Compile Time (A0) | PDF Size | Memory Usage |
|
|
729
|
+
|---------|-------------------|----------|--------------|
|
|
730
|
+
| beamerposter | ~5-10 seconds | 2-5 MB | Low |
|
|
731
|
+
| tikzposter | ~15-30 seconds | 5-15 MB | Medium-High |
|
|
732
|
+
| baposter | ~8-15 seconds | 3-8 MB | Medium |
|
|
733
|
+
|
|
734
|
+
*Note: Times for poster with 5 figures, typical conference content*
|
|
735
|
+
|
|
736
|
+
## Conclusion
|
|
737
|
+
|
|
738
|
+
All three packages are excellent choices for different scenarios:
|
|
739
|
+
|
|
740
|
+
- **beamerposter**: Best for traditional academic settings and Beamer users
|
|
741
|
+
- **tikzposter**: Best for modern, visually striking presentations
|
|
742
|
+
- **baposter**: Best for structured, professional multi-section posters
|
|
743
|
+
|
|
744
|
+
Choose based on your specific needs, aesthetic preferences, and time constraints. When in doubt, start with tikzposter for modern conferences or beamerposter for traditional academic venues.
|
|
745
|
+
|