scientific-writer 2.2.1__py3-none-any.whl → 2.2.3__py3-none-any.whl

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  1. scientific_writer/.claude/WRITER.md +748 -0
  2. scientific_writer/.claude/settings.local.json +30 -0
  3. scientific_writer/.claude/skills/citation-management/SKILL.md +1046 -0
  4. scientific_writer/.claude/skills/citation-management/assets/bibtex_template.bib +264 -0
  5. scientific_writer/.claude/skills/citation-management/assets/citation_checklist.md +386 -0
  6. scientific_writer/.claude/skills/citation-management/references/bibtex_formatting.md +908 -0
  7. scientific_writer/.claude/skills/citation-management/references/citation_validation.md +794 -0
  8. scientific_writer/.claude/skills/citation-management/references/google_scholar_search.md +725 -0
  9. scientific_writer/.claude/skills/citation-management/references/metadata_extraction.md +870 -0
  10. scientific_writer/.claude/skills/citation-management/references/pubmed_search.md +839 -0
  11. scientific_writer/.claude/skills/citation-management/scripts/doi_to_bibtex.py +204 -0
  12. scientific_writer/.claude/skills/citation-management/scripts/extract_metadata.py +569 -0
  13. scientific_writer/.claude/skills/citation-management/scripts/format_bibtex.py +349 -0
  14. scientific_writer/.claude/skills/citation-management/scripts/search_google_scholar.py +282 -0
  15. scientific_writer/.claude/skills/citation-management/scripts/search_pubmed.py +398 -0
  16. scientific_writer/.claude/skills/citation-management/scripts/validate_citations.py +497 -0
  17. scientific_writer/.claude/skills/clinical-reports/IMPLEMENTATION_SUMMARY.md +641 -0
  18. scientific_writer/.claude/skills/clinical-reports/README.md +236 -0
  19. scientific_writer/.claude/skills/clinical-reports/SKILL.md +1088 -0
  20. scientific_writer/.claude/skills/clinical-reports/assets/case_report_template.md +352 -0
  21. scientific_writer/.claude/skills/clinical-reports/assets/clinical_trial_csr_template.md +353 -0
  22. scientific_writer/.claude/skills/clinical-reports/assets/clinical_trial_sae_template.md +359 -0
  23. scientific_writer/.claude/skills/clinical-reports/assets/consult_note_template.md +305 -0
  24. scientific_writer/.claude/skills/clinical-reports/assets/discharge_summary_template.md +453 -0
  25. scientific_writer/.claude/skills/clinical-reports/assets/hipaa_compliance_checklist.md +395 -0
  26. scientific_writer/.claude/skills/clinical-reports/assets/history_physical_template.md +305 -0
  27. scientific_writer/.claude/skills/clinical-reports/assets/lab_report_template.md +309 -0
  28. scientific_writer/.claude/skills/clinical-reports/assets/pathology_report_template.md +249 -0
  29. scientific_writer/.claude/skills/clinical-reports/assets/quality_checklist.md +338 -0
  30. scientific_writer/.claude/skills/clinical-reports/assets/radiology_report_template.md +318 -0
  31. scientific_writer/.claude/skills/clinical-reports/assets/soap_note_template.md +253 -0
  32. scientific_writer/.claude/skills/clinical-reports/references/case_report_guidelines.md +570 -0
  33. scientific_writer/.claude/skills/clinical-reports/references/clinical_trial_reporting.md +693 -0
  34. scientific_writer/.claude/skills/clinical-reports/references/data_presentation.md +530 -0
  35. scientific_writer/.claude/skills/clinical-reports/references/diagnostic_reports_standards.md +629 -0
  36. scientific_writer/.claude/skills/clinical-reports/references/medical_terminology.md +588 -0
  37. scientific_writer/.claude/skills/clinical-reports/references/patient_documentation.md +744 -0
  38. scientific_writer/.claude/skills/clinical-reports/references/peer_review_standards.md +585 -0
  39. scientific_writer/.claude/skills/clinical-reports/references/regulatory_compliance.md +577 -0
  40. scientific_writer/.claude/skills/clinical-reports/scripts/check_deidentification.py +346 -0
  41. scientific_writer/.claude/skills/clinical-reports/scripts/compliance_checker.py +78 -0
  42. scientific_writer/.claude/skills/clinical-reports/scripts/extract_clinical_data.py +102 -0
  43. scientific_writer/.claude/skills/clinical-reports/scripts/format_adverse_events.py +103 -0
  44. scientific_writer/.claude/skills/clinical-reports/scripts/generate_report_template.py +163 -0
  45. scientific_writer/.claude/skills/clinical-reports/scripts/terminology_validator.py +133 -0
  46. scientific_writer/.claude/skills/clinical-reports/scripts/validate_case_report.py +334 -0
  47. scientific_writer/.claude/skills/clinical-reports/scripts/validate_trial_report.py +89 -0
  48. scientific_writer/.claude/skills/document-skills/docx/LICENSE.txt +30 -0
  49. scientific_writer/.claude/skills/document-skills/docx/SKILL.md +197 -0
  50. scientific_writer/.claude/skills/document-skills/docx/docx-js.md +350 -0
  51. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-chart.xsd +1499 -0
  52. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-chartDrawing.xsd +146 -0
  53. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-diagram.xsd +1085 -0
  54. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-lockedCanvas.xsd +11 -0
  55. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-main.xsd +3081 -0
  56. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-picture.xsd +23 -0
  57. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-spreadsheetDrawing.xsd +185 -0
  58. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/dml-wordprocessingDrawing.xsd +287 -0
  59. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/pml.xsd +1676 -0
  60. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-additionalCharacteristics.xsd +28 -0
  61. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-bibliography.xsd +144 -0
  62. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-commonSimpleTypes.xsd +174 -0
  63. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-customXmlDataProperties.xsd +25 -0
  64. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-customXmlSchemaProperties.xsd +18 -0
  65. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesCustom.xsd +59 -0
  66. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesExtended.xsd +56 -0
  67. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesVariantTypes.xsd +195 -0
  68. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-math.xsd +582 -0
  69. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/shared-relationshipReference.xsd +25 -0
  70. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/sml.xsd +4439 -0
  71. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-main.xsd +570 -0
  72. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-officeDrawing.xsd +509 -0
  73. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-presentationDrawing.xsd +12 -0
  74. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-spreadsheetDrawing.xsd +108 -0
  75. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/vml-wordprocessingDrawing.xsd +96 -0
  76. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/wml.xsd +3646 -0
  77. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ISO-IEC29500-4_2016/xml.xsd +116 -0
  78. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ecma/fouth-edition/opc-contentTypes.xsd +42 -0
  79. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ecma/fouth-edition/opc-coreProperties.xsd +50 -0
  80. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ecma/fouth-edition/opc-digSig.xsd +49 -0
  81. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/ecma/fouth-edition/opc-relationships.xsd +33 -0
  82. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/mce/mc.xsd +75 -0
  83. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-2010.xsd +560 -0
  84. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-2012.xsd +67 -0
  85. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-2018.xsd +14 -0
  86. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-cex-2018.xsd +20 -0
  87. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-cid-2016.xsd +13 -0
  88. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-sdtdatahash-2020.xsd +4 -0
  89. scientific_writer/.claude/skills/document-skills/docx/ooxml/schemas/microsoft/wml-symex-2015.xsd +8 -0
  90. scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/pack.py +159 -0
  91. scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/unpack.py +29 -0
  92. scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/validate.py +69 -0
  93. scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/validation/__init__.py +15 -0
  94. scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/validation/base.py +951 -0
  95. scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/validation/docx.py +274 -0
  96. scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/validation/pptx.py +315 -0
  97. scientific_writer/.claude/skills/document-skills/docx/ooxml/scripts/validation/redlining.py +279 -0
  98. scientific_writer/.claude/skills/document-skills/docx/ooxml.md +610 -0
  99. scientific_writer/.claude/skills/document-skills/docx/scripts/__init__.py +1 -0
  100. scientific_writer/.claude/skills/document-skills/docx/scripts/document.py +1276 -0
  101. scientific_writer/.claude/skills/document-skills/docx/scripts/templates/comments.xml +3 -0
  102. scientific_writer/.claude/skills/document-skills/docx/scripts/templates/commentsExtended.xml +3 -0
  103. scientific_writer/.claude/skills/document-skills/docx/scripts/templates/commentsExtensible.xml +3 -0
  104. scientific_writer/.claude/skills/document-skills/docx/scripts/templates/commentsIds.xml +3 -0
  105. scientific_writer/.claude/skills/document-skills/docx/scripts/templates/people.xml +3 -0
  106. scientific_writer/.claude/skills/document-skills/docx/scripts/utilities.py +374 -0
  107. scientific_writer/.claude/skills/document-skills/pdf/LICENSE.txt +30 -0
  108. scientific_writer/.claude/skills/document-skills/pdf/SKILL.md +294 -0
  109. scientific_writer/.claude/skills/document-skills/pdf/forms.md +205 -0
  110. scientific_writer/.claude/skills/document-skills/pdf/reference.md +612 -0
  111. scientific_writer/.claude/skills/document-skills/pdf/scripts/check_bounding_boxes.py +70 -0
  112. scientific_writer/.claude/skills/document-skills/pdf/scripts/check_bounding_boxes_test.py +226 -0
  113. scientific_writer/.claude/skills/document-skills/pdf/scripts/check_fillable_fields.py +12 -0
  114. scientific_writer/.claude/skills/document-skills/pdf/scripts/convert_pdf_to_images.py +35 -0
  115. scientific_writer/.claude/skills/document-skills/pdf/scripts/create_validation_image.py +41 -0
  116. scientific_writer/.claude/skills/document-skills/pdf/scripts/extract_form_field_info.py +152 -0
  117. scientific_writer/.claude/skills/document-skills/pdf/scripts/fill_fillable_fields.py +114 -0
  118. scientific_writer/.claude/skills/document-skills/pdf/scripts/fill_pdf_form_with_annotations.py +108 -0
  119. scientific_writer/.claude/skills/document-skills/pptx/LICENSE.txt +30 -0
  120. scientific_writer/.claude/skills/document-skills/pptx/SKILL.md +484 -0
  121. scientific_writer/.claude/skills/document-skills/pptx/html2pptx.md +625 -0
  122. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-chart.xsd +1499 -0
  123. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-chartDrawing.xsd +146 -0
  124. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-diagram.xsd +1085 -0
  125. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-lockedCanvas.xsd +11 -0
  126. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-main.xsd +3081 -0
  127. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-picture.xsd +23 -0
  128. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-spreadsheetDrawing.xsd +185 -0
  129. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/dml-wordprocessingDrawing.xsd +287 -0
  130. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/pml.xsd +1676 -0
  131. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-additionalCharacteristics.xsd +28 -0
  132. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-bibliography.xsd +144 -0
  133. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-commonSimpleTypes.xsd +174 -0
  134. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-customXmlDataProperties.xsd +25 -0
  135. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-customXmlSchemaProperties.xsd +18 -0
  136. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesCustom.xsd +59 -0
  137. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesExtended.xsd +56 -0
  138. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesVariantTypes.xsd +195 -0
  139. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-math.xsd +582 -0
  140. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/shared-relationshipReference.xsd +25 -0
  141. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/sml.xsd +4439 -0
  142. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/vml-main.xsd +570 -0
  143. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/vml-officeDrawing.xsd +509 -0
  144. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/vml-presentationDrawing.xsd +12 -0
  145. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/vml-spreadsheetDrawing.xsd +108 -0
  146. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/vml-wordprocessingDrawing.xsd +96 -0
  147. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/wml.xsd +3646 -0
  148. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ISO-IEC29500-4_2016/xml.xsd +116 -0
  149. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ecma/fouth-edition/opc-contentTypes.xsd +42 -0
  150. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ecma/fouth-edition/opc-coreProperties.xsd +50 -0
  151. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ecma/fouth-edition/opc-digSig.xsd +49 -0
  152. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/ecma/fouth-edition/opc-relationships.xsd +33 -0
  153. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/mce/mc.xsd +75 -0
  154. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-2010.xsd +560 -0
  155. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-2012.xsd +67 -0
  156. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-2018.xsd +14 -0
  157. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-cex-2018.xsd +20 -0
  158. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-cid-2016.xsd +13 -0
  159. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-sdtdatahash-2020.xsd +4 -0
  160. scientific_writer/.claude/skills/document-skills/pptx/ooxml/schemas/microsoft/wml-symex-2015.xsd +8 -0
  161. scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/pack.py +159 -0
  162. scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/unpack.py +29 -0
  163. scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/validate.py +69 -0
  164. scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/validation/__init__.py +15 -0
  165. scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/validation/base.py +951 -0
  166. scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/validation/docx.py +274 -0
  167. scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/validation/pptx.py +315 -0
  168. scientific_writer/.claude/skills/document-skills/pptx/ooxml/scripts/validation/redlining.py +279 -0
  169. scientific_writer/.claude/skills/document-skills/pptx/ooxml.md +427 -0
  170. scientific_writer/.claude/skills/document-skills/pptx/scripts/html2pptx.js +979 -0
  171. scientific_writer/.claude/skills/document-skills/pptx/scripts/inventory.py +1020 -0
  172. scientific_writer/.claude/skills/document-skills/pptx/scripts/rearrange.py +231 -0
  173. scientific_writer/.claude/skills/document-skills/pptx/scripts/replace.py +385 -0
  174. scientific_writer/.claude/skills/document-skills/pptx/scripts/thumbnail.py +450 -0
  175. scientific_writer/.claude/skills/document-skills/xlsx/LICENSE.txt +30 -0
  176. scientific_writer/.claude/skills/document-skills/xlsx/SKILL.md +289 -0
  177. scientific_writer/.claude/skills/document-skills/xlsx/recalc.py +178 -0
  178. scientific_writer/.claude/skills/hypothesis-generation/SKILL.md +155 -0
  179. scientific_writer/.claude/skills/hypothesis-generation/assets/hypothesis_output_template.md +302 -0
  180. scientific_writer/.claude/skills/hypothesis-generation/references/experimental_design_patterns.md +327 -0
  181. scientific_writer/.claude/skills/hypothesis-generation/references/hypothesis_quality_criteria.md +196 -0
  182. scientific_writer/.claude/skills/hypothesis-generation/references/literature_search_strategies.md +505 -0
  183. scientific_writer/.claude/skills/latex-posters/README.md +417 -0
  184. scientific_writer/.claude/skills/latex-posters/SKILL.md +919 -0
  185. scientific_writer/.claude/skills/latex-posters/assets/baposter_template.tex +257 -0
  186. scientific_writer/.claude/skills/latex-posters/assets/beamerposter_template.tex +244 -0
  187. scientific_writer/.claude/skills/latex-posters/assets/poster_quality_checklist.md +358 -0
  188. scientific_writer/.claude/skills/latex-posters/assets/tikzposter_template.tex +251 -0
  189. scientific_writer/.claude/skills/latex-posters/references/latex_poster_packages.md +745 -0
  190. scientific_writer/.claude/skills/latex-posters/references/poster_content_guide.md +748 -0
  191. scientific_writer/.claude/skills/latex-posters/references/poster_design_principles.md +806 -0
  192. scientific_writer/.claude/skills/latex-posters/references/poster_layout_design.md +900 -0
  193. scientific_writer/.claude/skills/latex-posters/scripts/review_poster.sh +214 -0
  194. scientific_writer/.claude/skills/literature-review/SKILL.md +546 -0
  195. scientific_writer/.claude/skills/literature-review/assets/review_template.md +412 -0
  196. scientific_writer/.claude/skills/literature-review/references/citation_styles.md +166 -0
  197. scientific_writer/.claude/skills/literature-review/references/database_strategies.md +381 -0
  198. scientific_writer/.claude/skills/literature-review/scripts/generate_pdf.py +176 -0
  199. scientific_writer/.claude/skills/literature-review/scripts/search_databases.py +303 -0
  200. scientific_writer/.claude/skills/literature-review/scripts/verify_citations.py +222 -0
  201. scientific_writer/.claude/skills/markitdown/INSTALLATION_GUIDE.md +318 -0
  202. scientific_writer/.claude/skills/markitdown/LICENSE.txt +22 -0
  203. scientific_writer/.claude/skills/markitdown/OPENROUTER_INTEGRATION.md +359 -0
  204. scientific_writer/.claude/skills/markitdown/QUICK_REFERENCE.md +309 -0
  205. scientific_writer/.claude/skills/markitdown/README.md +184 -0
  206. scientific_writer/.claude/skills/markitdown/SKILL.md +450 -0
  207. scientific_writer/.claude/skills/markitdown/SKILL_SUMMARY.md +307 -0
  208. scientific_writer/.claude/skills/markitdown/assets/example_usage.md +463 -0
  209. scientific_writer/.claude/skills/markitdown/references/api_reference.md +399 -0
  210. scientific_writer/.claude/skills/markitdown/references/file_formats.md +542 -0
  211. scientific_writer/.claude/skills/markitdown/scripts/batch_convert.py +228 -0
  212. scientific_writer/.claude/skills/markitdown/scripts/convert_literature.py +283 -0
  213. scientific_writer/.claude/skills/markitdown/scripts/convert_with_ai.py +243 -0
  214. scientific_writer/.claude/skills/paper-2-web/SKILL.md +455 -0
  215. scientific_writer/.claude/skills/paper-2-web/references/installation.md +141 -0
  216. scientific_writer/.claude/skills/paper-2-web/references/paper2poster.md +346 -0
  217. scientific_writer/.claude/skills/paper-2-web/references/paper2video.md +305 -0
  218. scientific_writer/.claude/skills/paper-2-web/references/paper2web.md +187 -0
  219. scientific_writer/.claude/skills/paper-2-web/references/usage_examples.md +436 -0
  220. scientific_writer/.claude/skills/peer-review/SKILL.md +375 -0
  221. scientific_writer/.claude/skills/peer-review/references/common_issues.md +552 -0
  222. scientific_writer/.claude/skills/peer-review/references/reporting_standards.md +290 -0
  223. scientific_writer/.claude/skills/research-grants/README.md +285 -0
  224. scientific_writer/.claude/skills/research-grants/SKILL.md +896 -0
  225. scientific_writer/.claude/skills/research-grants/assets/budget_justification_template.md +453 -0
  226. scientific_writer/.claude/skills/research-grants/assets/nih_specific_aims_template.md +166 -0
  227. scientific_writer/.claude/skills/research-grants/assets/nsf_project_summary_template.md +92 -0
  228. scientific_writer/.claude/skills/research-grants/references/broader_impacts.md +392 -0
  229. scientific_writer/.claude/skills/research-grants/references/darpa_guidelines.md +636 -0
  230. scientific_writer/.claude/skills/research-grants/references/doe_guidelines.md +586 -0
  231. scientific_writer/.claude/skills/research-grants/references/nih_guidelines.md +851 -0
  232. scientific_writer/.claude/skills/research-grants/references/nsf_guidelines.md +570 -0
  233. scientific_writer/.claude/skills/research-grants/references/specific_aims_guide.md +458 -0
  234. scientific_writer/.claude/skills/research-lookup/README.md +116 -0
  235. scientific_writer/.claude/skills/research-lookup/SKILL.md +443 -0
  236. scientific_writer/.claude/skills/research-lookup/examples.py +174 -0
  237. scientific_writer/.claude/skills/research-lookup/lookup.py +93 -0
  238. scientific_writer/.claude/skills/research-lookup/research_lookup.py +335 -0
  239. scientific_writer/.claude/skills/research-lookup/scripts/research_lookup.py +261 -0
  240. scientific_writer/.claude/skills/scholar-evaluation/SKILL.md +254 -0
  241. scientific_writer/.claude/skills/scholar-evaluation/references/evaluation_framework.md +663 -0
  242. scientific_writer/.claude/skills/scholar-evaluation/scripts/calculate_scores.py +378 -0
  243. scientific_writer/.claude/skills/scientific-critical-thinking/SKILL.md +530 -0
  244. scientific_writer/.claude/skills/scientific-critical-thinking/references/common_biases.md +364 -0
  245. scientific_writer/.claude/skills/scientific-critical-thinking/references/evidence_hierarchy.md +484 -0
  246. scientific_writer/.claude/skills/scientific-critical-thinking/references/experimental_design.md +496 -0
  247. scientific_writer/.claude/skills/scientific-critical-thinking/references/logical_fallacies.md +478 -0
  248. scientific_writer/.claude/skills/scientific-critical-thinking/references/scientific_method.md +169 -0
  249. scientific_writer/.claude/skills/scientific-critical-thinking/references/statistical_pitfalls.md +506 -0
  250. scientific_writer/.claude/skills/scientific-schematics/SKILL.md +2035 -0
  251. scientific_writer/.claude/skills/scientific-schematics/assets/block_diagram_template.tex +199 -0
  252. scientific_writer/.claude/skills/scientific-schematics/assets/circuit_template.tex +159 -0
  253. scientific_writer/.claude/skills/scientific-schematics/assets/flowchart_template.tex +161 -0
  254. scientific_writer/.claude/skills/scientific-schematics/assets/pathway_template.tex +162 -0
  255. scientific_writer/.claude/skills/scientific-schematics/assets/tikz_styles.tex +422 -0
  256. scientific_writer/.claude/skills/scientific-schematics/references/best_practices.md +562 -0
  257. scientific_writer/.claude/skills/scientific-schematics/references/diagram_types.md +637 -0
  258. scientific_writer/.claude/skills/scientific-schematics/references/python_libraries.md +791 -0
  259. scientific_writer/.claude/skills/scientific-schematics/references/tikz_guide.md +734 -0
  260. scientific_writer/.claude/skills/scientific-schematics/scripts/circuit_generator.py +307 -0
  261. scientific_writer/.claude/skills/scientific-schematics/scripts/compile_tikz.py +292 -0
  262. scientific_writer/.claude/skills/scientific-schematics/scripts/generate_flowchart.py +281 -0
  263. scientific_writer/.claude/skills/scientific-schematics/scripts/pathway_diagram.py +406 -0
  264. scientific_writer/.claude/skills/scientific-writing/SKILL.md +443 -0
  265. scientific_writer/.claude/skills/scientific-writing/references/citation_styles.md +720 -0
  266. scientific_writer/.claude/skills/scientific-writing/references/figures_tables.md +806 -0
  267. scientific_writer/.claude/skills/scientific-writing/references/imrad_structure.md +658 -0
  268. scientific_writer/.claude/skills/scientific-writing/references/reporting_guidelines.md +748 -0
  269. scientific_writer/.claude/skills/scientific-writing/references/writing_principles.md +824 -0
  270. scientific_writer/.claude/skills/treatment-plans/README.md +483 -0
  271. scientific_writer/.claude/skills/treatment-plans/SKILL.md +817 -0
  272. scientific_writer/.claude/skills/treatment-plans/assets/chronic_disease_management_plan.tex +636 -0
  273. scientific_writer/.claude/skills/treatment-plans/assets/general_medical_treatment_plan.tex +616 -0
  274. scientific_writer/.claude/skills/treatment-plans/assets/mental_health_treatment_plan.tex +745 -0
  275. scientific_writer/.claude/skills/treatment-plans/assets/pain_management_plan.tex +770 -0
  276. scientific_writer/.claude/skills/treatment-plans/assets/perioperative_care_plan.tex +724 -0
  277. scientific_writer/.claude/skills/treatment-plans/assets/quality_checklist.md +471 -0
  278. scientific_writer/.claude/skills/treatment-plans/assets/rehabilitation_treatment_plan.tex +727 -0
  279. scientific_writer/.claude/skills/treatment-plans/references/goal_setting_frameworks.md +411 -0
  280. scientific_writer/.claude/skills/treatment-plans/references/intervention_guidelines.md +507 -0
  281. scientific_writer/.claude/skills/treatment-plans/references/regulatory_compliance.md +476 -0
  282. scientific_writer/.claude/skills/treatment-plans/references/specialty_specific_guidelines.md +607 -0
  283. scientific_writer/.claude/skills/treatment-plans/references/treatment_plan_standards.md +456 -0
  284. scientific_writer/.claude/skills/treatment-plans/scripts/check_completeness.py +318 -0
  285. scientific_writer/.claude/skills/treatment-plans/scripts/generate_template.py +244 -0
  286. scientific_writer/.claude/skills/treatment-plans/scripts/timeline_generator.py +369 -0
  287. scientific_writer/.claude/skills/treatment-plans/scripts/validate_treatment_plan.py +367 -0
  288. scientific_writer/.claude/skills/venue-templates/SKILL.md +590 -0
  289. scientific_writer/.claude/skills/venue-templates/assets/grants/nih_specific_aims.tex +235 -0
  290. scientific_writer/.claude/skills/venue-templates/assets/grants/nsf_proposal_template.tex +375 -0
  291. scientific_writer/.claude/skills/venue-templates/assets/journals/nature_article.tex +171 -0
  292. scientific_writer/.claude/skills/venue-templates/assets/journals/neurips_article.tex +283 -0
  293. scientific_writer/.claude/skills/venue-templates/assets/journals/plos_one.tex +317 -0
  294. scientific_writer/.claude/skills/venue-templates/assets/posters/beamerposter_academic.tex +311 -0
  295. scientific_writer/.claude/skills/venue-templates/references/conferences_formatting.md +564 -0
  296. scientific_writer/.claude/skills/venue-templates/references/grants_requirements.md +787 -0
  297. scientific_writer/.claude/skills/venue-templates/references/journals_formatting.md +486 -0
  298. scientific_writer/.claude/skills/venue-templates/references/posters_guidelines.md +628 -0
  299. scientific_writer/.claude/skills/venue-templates/scripts/customize_template.py +206 -0
  300. scientific_writer/.claude/skills/venue-templates/scripts/query_template.py +260 -0
  301. scientific_writer/.claude/skills/venue-templates/scripts/validate_format.py +255 -0
  302. scientific_writer/__init__.py +1 -1
  303. scientific_writer/api.py +9 -5
  304. scientific_writer/cli.py +9 -5
  305. scientific_writer/core.py +28 -5
  306. {scientific_writer-2.2.1.dist-info → scientific_writer-2.2.3.dist-info}/METADATA +1 -1
  307. scientific_writer-2.2.3.dist-info/RECORD +312 -0
  308. scientific_writer-2.2.1.dist-info/RECORD +0 -11
  309. {scientific_writer-2.2.1.dist-info → scientific_writer-2.2.3.dist-info}/WHEEL +0 -0
  310. {scientific_writer-2.2.1.dist-info → scientific_writer-2.2.3.dist-info}/entry_points.txt +0 -0
  311. {scientific_writer-2.2.1.dist-info → scientific_writer-2.2.3.dist-info}/licenses/LICENSE +0 -0
@@ -0,0 +1,453 @@
1
+ # Discharge Summary Template
2
+
3
+ ## Patient Information
4
+
5
+ **Patient Name:** [Last, First]
6
+ **Medical Record Number:** [MRN]
7
+ **Date of Birth:** [MM/DD/YYYY]
8
+ **Age:** [years]
9
+ **Sex:** [M/F]
10
+
11
+ **Admission Date:** [MM/DD/YYYY]
12
+ **Discharge Date:** [MM/DD/YYYY]
13
+ **Length of Stay:** [X days]
14
+
15
+ **Admitting Service:** [Medicine/Surgery/Cardiology/etc.]
16
+ **Attending Physician:** [Name]
17
+ **Primary Care Physician:** [Name and contact]
18
+ **Consulting Services:** [List specialties that saw patient]
19
+
20
+ ---
21
+
22
+ ## Admission Diagnosis
23
+
24
+ [Primary reason for hospitalization]
25
+
26
+ Example: "Acute decompensated heart failure"
27
+
28
+ ---
29
+
30
+ ## Discharge Diagnoses
31
+
32
+ [Numbered list, prioritized by clinical significance]
33
+
34
+ **Primary Diagnosis:**
35
+ 1. [Primary diagnosis with ICD-10 code]
36
+
37
+ **Secondary Diagnoses:**
38
+ 2. [Secondary diagnosis with ICD-10 code]
39
+ 3. [Additional diagnosis with ICD-10 code]
40
+ 4. [Comorbidity with ICD-10 code]
41
+
42
+ Example:
43
+ ```
44
+ 1. Acute decompensated heart failure (I50.23)
45
+ 2. Acute kidney injury on chronic kidney disease stage 3 (N17.9, N18.3)
46
+ 3. Hypokalemia (E87.6)
47
+ 4. Type 2 diabetes mellitus (E11.9)
48
+ 5. Coronary artery disease (I25.10)
49
+ ```
50
+
51
+ ---
52
+
53
+ ## Hospital Course
54
+
55
+ [Comprehensive yet concise narrative of hospital stay - can be organized chronologically or by problem]
56
+
57
+ ### Chronological Format:
58
+
59
+ **[Date Range or Hospital Day 1-X]:**
60
+
61
+ [Patient Name] was admitted to the [service] service with [chief complaint/presenting problem]. On presentation, patient was [clinical status]. Initial workup revealed [key findings].
62
+
63
+ [Description of key events, interventions, and response to treatment organized by day or by problem]
64
+
65
+ **Hospital Day 1:** [Events and interventions]
66
+
67
+ **Hospital Day 2-3:** [Progression, response to treatment]
68
+
69
+ **Hospital Day 4-7:** [Continued treatment, consultations, procedures]
70
+
71
+ **Final Hospital Days:** [Stabilization, preparation for discharge]
72
+
73
+ ### Problem-Based Format (Alternative):
74
+
75
+ **1. [Primary Problem]**
76
+ - Presentation and initial management
77
+ - Diagnostic workup
78
+ - Treatment course
79
+ - Response and outcome
80
+ - Status at discharge
81
+
82
+ **2. [Secondary Problem]**
83
+ - [Similar structure]
84
+
85
+ **3. [Additional Problems]**
86
+
87
+ ### Key Events and Interventions
88
+
89
+ **Consultations Obtained:**
90
+ - [Specialty] consulted on [date] for [reason]: [Recommendations]
91
+
92
+ **Procedures Performed:**
93
+ - [Procedure name] on [date]: [Indication, findings, complications if any]
94
+
95
+ **Significant Diagnostic Studies:**
96
+ - [Test/imaging] on [date]: [Key findings relevant to discharge care]
97
+
98
+ **Complications:**
99
+ - [Any complications that occurred]: [How managed]
100
+
101
+ ---
102
+
103
+ ## Procedures Performed During Hospitalization
104
+
105
+ 1. [Procedure name] ([Date])
106
+ - Indication: [Why performed]
107
+ - Findings: [Key findings]
108
+ - Complications: [None / specific complications]
109
+
110
+ 2. [Additional procedures]
111
+
112
+ ---
113
+
114
+ ## Hospital Course Summary (Brief Version)
115
+
116
+ [One paragraph summary suitable for quick reference]
117
+
118
+ Example:
119
+ ```
120
+ Mr. [Name] was admitted with acute decompensated heart failure in the setting of
121
+ medication non-adherence. He was diuresed with IV furosemide with net negative
122
+ 5 liters over 3 days, with significant improvement in dyspnea and resolution of
123
+ lower extremity edema. Echocardiogram showed EF 30%, similar to prior. Kidney
124
+ function improved to baseline with diuresis. He was transitioned to oral diuretics
125
+ on hospital day 3 and remained stable. Patient was ambulating without dyspnea on
126
+ room air by discharge. Comprehensive heart failure education was provided.
127
+ ```
128
+
129
+ ---
130
+
131
+ ## Discharge Physical Examination
132
+
133
+ **Vital Signs:**
134
+ - Temperature: \_\_\_\_\_ °F
135
+ - Blood Pressure: \_\_\_\_\_/\_\_\_\_\_ mmHg
136
+ - Heart Rate: \_\_\_\_\_ bpm
137
+ - Respiratory Rate: \_\_\_\_\_ breaths/min
138
+ - Oxygen Saturation: \_\_\_\_\_% on [room air / O2]
139
+ - Weight: \_\_\_\_\_ kg (Admission weight: \_\_\_\_\_ kg)
140
+
141
+ **General:** [Appearance, distress level]
142
+
143
+ **Cardiovascular:** [Heart sounds, edema]
144
+
145
+ **Pulmonary:** [Breath sounds, work of breathing]
146
+
147
+ **Abdomen:** [Tenderness, bowel sounds, distention]
148
+
149
+ **Extremities:** [Edema, pulses]
150
+
151
+ **Neurological:** [Mental status, focal deficits]
152
+
153
+ **Wounds/Incisions (if applicable):** [Healing status]
154
+
155
+ ---
156
+
157
+ ## Pertinent Laboratory and Imaging Results
158
+
159
+ ### Discharge Labs ([Date])
160
+
161
+ | Test | Result | Reference Range |
162
+ |------|--------|----------------|
163
+ | WBC | [Value] | [Range] |
164
+ | Hemoglobin | [Value] | [Range] |
165
+ | Platelets | [Value] | [Range] |
166
+ | Sodium | [Value] | [Range] |
167
+ | Potassium | [Value] | [Range] |
168
+ | Creatinine | [Value] | [Range] |
169
+ | [Other relevant labs] | [Value] | [Range] |
170
+
171
+ ### Imaging/Diagnostic Studies
172
+
173
+ **[Study name] ([Date]):** [Key findings relevant to outpatient management]
174
+
175
+ ---
176
+
177
+ ## Discharge Medications
178
+
179
+ [Complete list with clear indication of changes from admission]
180
+
181
+ ### New Medications (Started During Hospitalization)
182
+
183
+ 1. **[Medication name]** [dose] [route] [frequency]
184
+ - Indication: [Why prescribed]
185
+ - Duration: [If limited duration]
186
+ - Special instructions: [With food, time of day, etc.]
187
+
188
+ ### Changed Medications (Dose or Frequency Modified)
189
+
190
+ 2. **[Medication name]** [NEW dose] [route] [frequency]
191
+ - **CHANGED FROM:** [Previous dose and frequency]
192
+ - Reason for change: [Why modified]
193
+
194
+ ### Continued Medications (No change from home medications)
195
+
196
+ 3. **[Medication name]** [dose] [route] [frequency]
197
+ - **CONTINUED** from home regimen
198
+
199
+ ### Discontinued Medications (Stopped During Hospitalization)
200
+
201
+ 4. **[Medication name]** - **DISCONTINUED**
202
+ - Reason: [Why stopped]
203
+
204
+ ### Complete Medication List for Patient
205
+
206
+ [Consolidated list in simple format for patient]
207
+
208
+ ```
209
+ 1. Furosemide 40 mg by mouth once daily [NEW - for fluid management]
210
+ 2. Carvedilol 12.5 mg by mouth twice daily [CONTINUED]
211
+ 3. Lisinopril 20 mg by mouth once daily [CONTINUED]
212
+ 4. Metformin 1000 mg by mouth twice daily [CONTINUED]
213
+ 5. Aspirin 81 mg by mouth once daily [CONTINUED]
214
+ ```
215
+
216
+ ---
217
+
218
+ ## Discharge Condition
219
+
220
+ **Overall Status:** [Stable / Improved / Baseline / Requires continued care]
221
+
222
+ **Specific Assessments:**
223
+ - Hemodynamic status: [Stable]
224
+ - Respiratory status: [Room air / Oxygen requirement]
225
+ - Mental status: [Alert and oriented x3 / Other]
226
+ - Functional status: [Ambulatory / Requires assistance / Bedbound]
227
+ - Pain control: [Adequate / Inadequate]
228
+ - Wound healing (if applicable): [Appropriate / Delayed]
229
+
230
+ Example:
231
+ ```
232
+ Patient is hemodynamically stable, ambulatory without assistance, no supplemental
233
+ oxygen requirement, euvolemic on physical exam, pain well-controlled, and has
234
+ returned to baseline functional status.
235
+ ```
236
+
237
+ ---
238
+
239
+ ## Discharge Disposition
240
+
241
+ [Where patient is going after hospital discharge]
242
+
243
+ Options:
244
+ - Home with self-care
245
+ - Home with home health services
246
+ - Skilled nursing facility
247
+ - Acute rehabilitation facility
248
+ - Long-term acute care hospital
249
+ - Hospice (home or facility)
250
+ - Left against medical advice (AMA)
251
+ - Transferred to another acute care facility
252
+
253
+ **Discharge Disposition:** [Selection from above]
254
+
255
+ **Services Arranged:**
256
+ - [ ] Home health nursing
257
+ - [ ] Physical therapy
258
+ - [ ] Occupational therapy
259
+ - [ ] Durable medical equipment: [List items]
260
+ - [ ] Home oxygen: [Flow rate and delivery method]
261
+ - [ ] Other: [Specify]
262
+
263
+ ---
264
+
265
+ ## Follow-Up Appointments
266
+
267
+ 1. **[Specialty/PCP]** with Dr. [Name]
268
+ - Date/Time: [Scheduled date and time] OR [Within X days/weeks]
269
+ - Location: [Clinic name and address]
270
+ - Phone: [Contact number]
271
+ - Purpose: [What needs to be addressed]
272
+
273
+ 2. **[Additional appointments]**
274
+
275
+ ### Pending Studies/Labs at Discharge
276
+
277
+ - [Test name]: [When due, where to go, reason]
278
+ - Results will be sent to: [Provider name]
279
+
280
+ ### Referrals Placed
281
+
282
+ - [Specialty]: [Reason for referral, contact information]
283
+
284
+ ---
285
+
286
+ ## Patient Instructions
287
+
288
+ ### Activity
289
+
290
+ - [Specific activity restrictions or recommendations]
291
+ - Example: "Resume normal activities as tolerated. Avoid heavy lifting >10 lbs for 2 weeks."
292
+
293
+ ### Diet
294
+
295
+ - [Dietary restrictions or recommendations]
296
+ - Example: "Low sodium diet (less than 2 grams per day). Fluid restriction to 2 liters per day."
297
+
298
+ ### Wound Care (if applicable)
299
+
300
+ - [Incision care instructions]
301
+ - [Dressing change frequency]
302
+ - [When stitches/staples should be removed]
303
+
304
+ ### Self-Monitoring
305
+
306
+ - [What patient should monitor at home]
307
+ - Example: "Weigh yourself every morning. Call doctor if weight gain >2 lbs in 1 day or >5 lbs in 1 week."
308
+
309
+ ### Equipment/Supplies
310
+
311
+ - [Equipment provided or prescribed]
312
+ - [How to use]
313
+
314
+ ### Medications
315
+
316
+ - [General medication instructions]
317
+ - [Importance of compliance]
318
+ - [What to do if dose missed]
319
+
320
+ ---
321
+
322
+ ## Return Precautions / Warning Signs
323
+
324
+ **Call your doctor or return to emergency department if you experience:**
325
+
326
+ - [Specific warning signs relevant to condition]
327
+ - [When to seek immediate care vs. call doctor]
328
+
329
+ Example for heart failure:
330
+ ```
331
+ - Worsening shortness of breath or difficulty breathing
332
+ - Chest pain or pressure
333
+ - Severe swelling in legs or abdomen
334
+ - Weight gain more than 2 lbs in one day or 5 lbs in one week
335
+ - Dizziness, lightheadedness, or fainting
336
+ - Fever >101°F
337
+ - Any other concerning symptoms
338
+ ```
339
+
340
+ **Emergency Contact Numbers:**
341
+ - Primary care physician: [Phone]
342
+ - Specialty clinic: [Phone]
343
+ - After-hours nurse line: [Phone]
344
+ - 911 for emergencies
345
+
346
+ ---
347
+
348
+ ## Patient Education Provided
349
+
350
+ Topics discussed with patient and/or family:
351
+ - [ ] Disease process and prognosis
352
+ - [ ] Medication purpose, dosing, and side effects
353
+ - [ ] Warning signs and when to seek care
354
+ - [ ] Activity and dietary restrictions
355
+ - [ ] Follow-up appointments
356
+ - [ ] Use of medical equipment
357
+ - [ ] [Other specific topics]
358
+
359
+ **Patient/Family Understanding:**
360
+ [Patient and family verbalize understanding of discharge instructions / Teach-back method used and patient able to repeat key points / Interpreter used]
361
+
362
+ **Written Materials Provided:**
363
+ - [ ] Discharge instructions
364
+ - [ ] Medication list
365
+ - [ ] Disease-specific education materials
366
+ - [ ] Emergency contact information
367
+ - [ ] Appointment information
368
+
369
+ ---
370
+
371
+ ## Code Status at Discharge
372
+
373
+ **Code Status:** [Full code / DNR / DNI / Other limitations]
374
+
375
+ [If changed during hospitalization, note when and why]
376
+
377
+ ---
378
+
379
+ ## Additional Information
380
+
381
+ ### Advance Directives
382
+
383
+ - [ ] Advance directive on file
384
+ - [ ] Healthcare proxy designated: [Name and contact]
385
+ - [ ] Living will present
386
+
387
+ ### Social Situation
388
+
389
+ [Relevant social factors affecting discharge plan]
390
+ - Living situation: [Lives alone / with family / assisted living]
391
+ - Caregiver support: [Available / Limited / None]
392
+ - Transportation: [Adequate / Needs assistance]
393
+ - Barriers to compliance: [Financial / Cognitive / Language / Other]
394
+
395
+ ### Pending Issues at Discharge
396
+
397
+ [Tests or consultations still pending that require outpatient follow-up]
398
+
399
+ ---
400
+
401
+ ## Signature
402
+
403
+ **Prepared by:**
404
+ [Physician name, credentials]
405
+ [Pager/Contact number]
406
+
407
+ **Cosigned by (if resident/fellow):**
408
+ [Attending physician name]
409
+
410
+ **Date and Time:** [MM/DD/YYYY at HH:MM]
411
+
412
+ **Electronically signed:** [Yes/No]
413
+
414
+ ---
415
+
416
+ ## Template Completion Checklist
417
+
418
+ - [ ] All discharge diagnoses listed with ICD-10 codes
419
+ - [ ] Hospital course summarized clearly
420
+ - [ ] All procedures documented
421
+ - [ ] Discharge medications reconciled and clearly marked (new/changed/continued/stopped)
422
+ - [ ] Follow-up appointments scheduled or timeframe provided
423
+ - [ ] Patient education documented
424
+ - [ ] Return precautions specific to patient's conditions
425
+ - [ ] Pending tests/results documented with follow-up plan
426
+ - [ ] Code status documented
427
+ - [ ] Completed within 24-48 hours of discharge (institutional requirement)
428
+ - [ ] Sent to primary care physician and relevant specialists
429
+ - [ ] Copy provided to patient
430
+
431
+ ---
432
+
433
+ ## Notes
434
+
435
+ **Timing Requirements:**
436
+ - CMS requires completion within 30 days
437
+ - Many hospitals require 24-48 hours
438
+ - Should be available for follow-up appointments
439
+
440
+ **Distribution:**
441
+ - Send to primary care physician
442
+ - Send to referring physician
443
+ - Send to consulting specialists involved in care
444
+ - Provide copy to patient
445
+ - Upload to shared HIE (Health Information Exchange)
446
+
447
+ **Quality Measures:**
448
+ - Medication reconciliation required
449
+ - Clear communication of changes
450
+ - Specific follow-up plans
451
+ - Patient education documented
452
+
453
+