molstar 4.3.0 → 4.4.0

package/lib/commonjs/mol-data/util/hash-functions.js

@@ -6,7 +6,15 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.hashFnv32a = exports.invertCantorPairing = exports.sortedCantorPairing = exports.cantorPairing = exports.hashString = exports.hash4 = exports.hash3 = exports.hash2 = exports.hash1 = void 0;
+exports.hash1 = hash1;
+exports.hash2 = hash2;
+exports.hash3 = hash3;
+exports.hash4 = hash4;
+exports.hashString = hashString;
+exports.cantorPairing = cantorPairing;
+exports.sortedCantorPairing = sortedCantorPairing;
+exports.invertCantorPairing = invertCantorPairing;
+exports.hashFnv32a = hashFnv32a;
 // from http://burtleburtle.net/bob/hash/integer.html
 function hash1(i) {
     let a = i ^ (i >> 4);
@@ -14,7 +22,6 @@ function hash1(i) {
     a = a ^ (a >> 11);
     return a;
 }
-exports.hash1 = hash1;
 function hash2(i, j) {
     let a = 23;
     a = (31 * a + i) | 0;
@@ -24,7 +31,6 @@ function hash2(i, j) {
     a = a ^ (a >> 11);
     return a;
 }
-exports.hash2 = hash2;
 function hash3(i, j, k) {
     let a = 23;
     a = (31 * a + i) | 0;
@@ -35,7 +41,6 @@ function hash3(i, j, k) {
     a = a ^ (a >> 11);
     return a;
 }
-exports.hash3 = hash3;
 function hash4(i, j, k, l) {
     let a = 23;
     a = (31 * a + i) | 0;
@@ -47,7 +52,6 @@ function hash4(i, j, k, l) {
     a = a ^ (a >> 11);
     return a;
 }
-exports.hash4 = hash4;
 function hashString(s) {
     let h = 0;
     for (let i = 0, l = s.length; i < l; i++) {
@@ -55,7 +59,6 @@ function hashString(s) {
     }
     return h;
 }
-exports.hashString = hashString;
 /**
  * A unique number for each pair of integers
  * Biggest representable pair is (67108863, 67108863) (limit imposed by Number.MAX_SAFE_INTEGER)
@@ -63,7 +66,6 @@ exports.hashString = hashString;
 function cantorPairing(a, b) {
     return (a + b) * (a + b + 1) / 2 + b;
 }
-exports.cantorPairing = cantorPairing;
 /**
  * A unique number for each sorted pair of integers
  * Biggest representable pair is (67108863, 67108863) (limit imposed by Number.MAX_SAFE_INTEGER)
@@ -71,7 +73,6 @@ exports.cantorPairing = cantorPairing;
 function sortedCantorPairing(a, b) {
     return a < b ? cantorPairing(a, b) : cantorPairing(b, a);
 }
-exports.sortedCantorPairing = sortedCantorPairing;
 function invertCantorPairing(out, z) {
     const w = Math.floor((Math.sqrt(8 * z + 1) - 1) / 2);
     const t = (w * w + w) / 2;
@@ -80,7 +81,6 @@ function invertCantorPairing(out, z) {
     out[1] = y;
     return out;
 }
-exports.invertCantorPairing = invertCantorPairing;
 /**
  * 32 bit FNV-1a hash, see http://isthe.com/chongo/tech/comp/fnv/
  */
@@ -92,4 +92,3 @@ function hashFnv32a(array) {
     }
     return hval >>> 0;
 }
-exports.hashFnv32a = hashFnv32a;

package/lib/commonjs/mol-data/util/sort.js

@@ -5,17 +5,19 @@
  * @author David Sehnal <david.sehnal@gmail.com>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.sort = exports.sortArrayRange = exports.sortArray = exports.arraySwap = exports.arrayLess = void 0;
+exports.arrayLess = arrayLess;
+exports.arraySwap = arraySwap;
+exports.sortArray = sortArray;
+exports.sortArrayRange = sortArrayRange;
+exports.sort = sort;
 function arrayLess(arr, i, j) {
     return arr[i] - arr[j];
 }
-exports.arrayLess = arrayLess;
 function arraySwap(arr, i, j) {
     const temp = arr[i];
     arr[i] = arr[j];
     arr[j] = temp;
 }
-exports.arraySwap = arraySwap;
 function medianPivotIndex(data, cmp, l, r) {
     const m = (l + r) >> 1;
     if (cmp(data, l, r) > 0)
@@ -143,7 +145,6 @@ function quickSortArrayAsc(data, parts, low, high) {
 function sortArray(data, cmp = arrayLess) {
     return sortArrayRange(data, 0, data.length, cmp);
 }
-exports.sortArray = sortArray;
 function sortArrayRange(data, start, end, cmp = arrayLess) {
     if (cmp === arrayLess)
         quickSortArrayAsc(data, [0, 0], start, end - 1);
@@ -151,10 +152,8 @@ function sortArrayRange(data, start, end, cmp = arrayLess) {
         quickSort({ data, cmp, swap: arraySwap, parts: [0, 0] }, start, end - 1);
     return data;
 }
-exports.sortArrayRange = sortArrayRange;
 function sort(data, start, end, cmp, swap) {
     const ctx = { data, cmp, swap, parts: [0, 0] };
     quickSort(ctx, start, end - 1);
     return data;
 }
-exports.sort = sort;

package/lib/commonjs/mol-geo/geometry/base.d.ts

@@ -24,7 +24,7 @@ export declare const VisualQualityInfo: {
     lowest: {};
 };
 export type VisualQuality = keyof typeof VisualQualityInfo;
-export declare const VisualQualityNames: ("auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest")[];
+export declare const VisualQualityNames: VisualQuality[];
 export declare const VisualQualityOptions: ["auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest", string][];
 export declare const ColorSmoothingParams: {
     smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{

package/lib/commonjs/mol-geo/geometry/base.js

@@ -5,7 +5,9 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.BaseGeometry = exports.getColorSmoothingProps = exports.hasColorSmoothingProp = exports.ColorSmoothingParams = exports.VisualQualityOptions = exports.VisualQualityNames = exports.VisualQualityInfo = void 0;
+exports.BaseGeometry = exports.ColorSmoothingParams = exports.VisualQualityOptions = exports.VisualQualityNames = exports.VisualQualityInfo = void 0;
+exports.hasColorSmoothingProp = hasColorSmoothingProp;
+exports.getColorSmoothingProps = getColorSmoothingProps;
 const mol_util_1 = require("../../mol-util");
 const location_iterator_1 = require("../util/location-iterator");
 const param_definition_1 = require("../../mol-util/param-definition");
@@ -46,7 +48,6 @@ exports.ColorSmoothingParams = {
 function hasColorSmoothingProp(props) {
     return !!props.smoothColors;
 }
-exports.hasColorSmoothingProp = hasColorSmoothingProp;
 function getColorSmoothingProps(smoothColors, preferSmoothing, resolution) {
     if ((smoothColors.name === 'on' || (smoothColors.name === 'auto' && preferSmoothing)) && resolution && resolution < 3) {
         let stride = 3;
@@ -65,7 +66,6 @@ function getColorSmoothingProps(smoothColors, preferSmoothing, resolution) {
     }
     ;
 }
-exports.getColorSmoothingProps = getColorSmoothingProps;
 //
 var BaseGeometry;
 (function (BaseGeometry) {

package/lib/commonjs/mol-geo/geometry/clipping-data.js

@@ -5,7 +5,10 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.createEmptyClipping = exports.createClipping = exports.clearClipping = exports.applyClippingGroups = void 0;
+exports.applyClippingGroups = applyClippingGroups;
+exports.clearClipping = clearClipping;
+exports.createClipping = createClipping;
+exports.createEmptyClipping = createEmptyClipping;
 const value_cell_1 = require("../../mol-util/value-cell");
 const linear_algebra_1 = require("../../mol-math/linear-algebra");
 const util_1 = require("../../mol-gl/renderable/util");
@@ -13,11 +16,9 @@ function applyClippingGroups(array, start, end, groups) {
     array.fill(groups, start, end);
     return true;
 }
-exports.applyClippingGroups = applyClippingGroups;
 function clearClipping(array, start, end) {
     array.fill(0, start, end);
 }
-exports.clearClipping = clearClipping;
 function createClipping(count, type, clippingData) {
     const clipping = (0, util_1.createTextureImage)(Math.max(1, count), 1, Uint8Array, clippingData && clippingData.tClipping.ref.value.array);
     if (clippingData) {
@@ -36,7 +37,6 @@ function createClipping(count, type, clippingData) {
         };
     }
 }
-exports.createClipping = createClipping;
 const emptyClippingTexture = { array: new Uint8Array(1), width: 1, height: 1 };
 function createEmptyClipping(clippingData) {
     if (clippingData) {
@@ -54,4 +54,3 @@ function createEmptyClipping(clippingData) {
         };
     }
 }
-exports.createEmptyClipping = createEmptyClipping;

package/lib/commonjs/mol-geo/geometry/color-data.js

@@ -7,7 +7,10 @@
  * @author Gianluca Tomasello <giagitom@gmail.com>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.createGridColor = exports.createTextureColor = exports.createValueColor = exports.createColors = void 0;
+exports.createColors = createColors;
+exports.createValueColor = createValueColor;
+exports.createTextureColor = createTextureColor;
+exports.createGridColor = createGridColor;
 const mol_util_1 = require("../../mol-util");
 const util_1 = require("../../mol-gl/renderable/util");
 const color_1 = require("../../mol-util/color");
@@ -25,7 +28,6 @@ function createColors(locationIt, positionIt, colorTheme, colorData) {
     }
     return data;
 }
-exports.createColors = createColors;
 function _createColors(locationIt, positionIt, colorTheme, colorData) {
     switch (colorTheme.granularity) {
         case 'uniform': return createUniformColor(locationIt, colorTheme.color, colorData);
@@ -92,7 +94,6 @@ function createValueColor(value, colorData) {
         };
     }
 }
-exports.createValueColor = createValueColor;
 /** Creates color uniform */
 function createUniformColor(locationIt, color, colorData) {
     return createValueColor(color(location_1.NullLocation, false), colorData);
@@ -119,7 +120,6 @@ function createTextureColor(colors, type, colorData) {
         };
     }
 }
-exports.createTextureColor = createTextureColor;
 /** Creates color texture with color for each instance */
 function createInstanceColor(locationIt, color, colorData) {
     const { instanceCount } = locationIt;
@@ -218,7 +218,6 @@ function createGridColor(grid, type, colorData) {
         };
     }
 }
-exports.createGridColor = createGridColor;
 //
 /** Creates direct color */
 function createDirectColor(colorData) {

package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts

@@ -50,6 +50,7 @@ export declare namespace Cylinders {
         sizeAspectRatio: PD.Numeric;
         doubleSided: PD.BooleanParam;
         ignoreLight: PD.BooleanParam;
+        celShaded: PD.BooleanParam;
         xrayShaded: PD.Select<boolean | "inverted">;
         transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
         solidInterior: PD.BooleanParam;

package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js

@@ -120,6 +120,7 @@ var Cylinders;
         sizeAspectRatio: param_definition_1.ParamDefinition.Numeric(1, { min: 0, max: 3, step: 0.01 }),
         doubleSided: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.CustomQualityParamInfo),
         ignoreLight: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.ShadingCategory),
+        celShaded: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.ShadingCategory),
         xrayShaded: param_definition_1.ParamDefinition.Select(false, [[false, 'Off'], [true, 'On'], ['inverted', 'Inverted']], base_1.BaseGeometry.ShadingCategory),
         transparentBackfaces: param_definition_1.ParamDefinition.Select('off', param_definition_1.ParamDefinition.arrayToOptions(['off', 'on', 'opaque']), base_1.BaseGeometry.ShadingCategory),
         solidInterior: param_definition_1.ParamDefinition.Boolean(true, base_1.BaseGeometry.ShadingCategory),
@@ -202,6 +203,7 @@ var Cylinders;
             uSizeFactor: mol_util_1.ValueCell.create(props.sizeFactor * props.sizeAspectRatio),
             uDoubleSided: mol_util_1.ValueCell.create(props.doubleSided),
             dIgnoreLight: mol_util_1.ValueCell.create(props.ignoreLight),
+            dCelShaded: mol_util_1.ValueCell.create(props.celShaded),
             dXrayShaded: mol_util_1.ValueCell.create(props.xrayShaded === 'inverted' ? 'inverted' : props.xrayShaded === true ? 'on' : 'off'),
             dTransparentBackfaces: mol_util_1.ValueCell.create(props.transparentBackfaces),
             dSolidInterior: mol_util_1.ValueCell.create(props.solidInterior),
@@ -220,6 +222,7 @@ var Cylinders;
         mol_util_1.ValueCell.updateIfChanged(values.uSizeFactor, props.sizeFactor * props.sizeAspectRatio);
         mol_util_1.ValueCell.updateIfChanged(values.uDoubleSided, props.doubleSided);
         mol_util_1.ValueCell.updateIfChanged(values.dIgnoreLight, props.ignoreLight);
+        mol_util_1.ValueCell.updateIfChanged(values.dCelShaded, props.celShaded);
         mol_util_1.ValueCell.updateIfChanged(values.dXrayShaded, props.xrayShaded === 'inverted' ? 'inverted' : props.xrayShaded === true ? 'on' : 'off');
         mol_util_1.ValueCell.updateIfChanged(values.dTransparentBackfaces, props.transparentBackfaces);
         mol_util_1.ValueCell.updateIfChanged(values.dSolidInterior, props.solidInterior);

package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts

@@ -34,6 +34,7 @@ export declare namespace DirectVolume {
     function createEmpty(directVolume?: DirectVolume): DirectVolume;
     const Params: {
         ignoreLight: PD.BooleanParam;
+        celShaded: PD.BooleanParam;
         xrayShaded: PD.Select<boolean | "inverted">;
         controlPoints: PD.LineGraph;
         stepsPerCell: PD.Numeric;

package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js

@@ -113,6 +113,7 @@ var DirectVolume;
     DirectVolume.Params = {
         ...base_1.BaseGeometry.Params,
         ignoreLight: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.ShadingCategory),
+        celShaded: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.ShadingCategory),
         xrayShaded: param_definition_1.ParamDefinition.Select(false, [[false, 'Off'], [true, 'On'], ['inverted', 'Inverted']], base_1.BaseGeometry.ShadingCategory),
         controlPoints: param_definition_1.ParamDefinition.LineGraph([
             linear_algebra_1.Vec2.create(0.19, 0.0), linear_algebra_1.Vec2.create(0.2, 0.05), linear_algebra_1.Vec2.create(0.25, 0.05), linear_algebra_1.Vec2.create(0.26, 0.0),
@@ -218,6 +219,7 @@ var DirectVolume;
             dPackedGroup: directVolume.packedGroup,
             dAxisOrder: mol_util_1.ValueCell.create(directVolume.axisOrder.ref.value.join('')),
             dIgnoreLight: mol_util_1.ValueCell.create(props.ignoreLight),
+            dCelShaded: mol_util_1.ValueCell.create(props.celShaded),
             dXrayShaded: mol_util_1.ValueCell.create(props.xrayShaded === 'inverted' ? 'inverted' : props.xrayShaded === true ? 'on' : 'off'),
         };
     }
@@ -229,6 +231,7 @@ var DirectVolume;
     function updateValues(values, props) {
         base_1.BaseGeometry.updateValues(values, props);
         mol_util_1.ValueCell.updateIfChanged(values.dIgnoreLight, props.ignoreLight);
+        mol_util_1.ValueCell.updateIfChanged(values.dCelShaded, props.celShaded);
         mol_util_1.ValueCell.updateIfChanged(values.dXrayShaded, props.xrayShaded === 'inverted' ? 'inverted' : props.xrayShaded === true ? 'on' : 'off');
         const controlPoints = (0, transfer_function_1.getControlPointsFromVec2Array)(props.controlPoints);
         (0, transfer_function_1.createTransferFunctionTexture)(controlPoints, values.tTransferTex);

package/lib/commonjs/mol-geo/geometry/direct-volume/transfer-function.js

@@ -5,7 +5,9 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.createTransferFunctionTexture = exports.getControlPointsFromVec2Array = exports.getControlPointsFromString = void 0;
+exports.getControlPointsFromString = getControlPointsFromString;
+exports.getControlPointsFromVec2Array = getControlPointsFromVec2Array;
+exports.createTransferFunctionTexture = createTransferFunctionTexture;
 const interpolate_1 = require("../../../mol-math/interpolate");
 const mol_util_1 = require("../../../mol-util");
 function getControlPointsFromString(s) {
@@ -14,11 +16,9 @@ function getControlPointsFromString(s) {
         return { x: parseFloat(ps[0]), alpha: parseFloat(ps[1]) };
     });
 }
-exports.getControlPointsFromString = getControlPointsFromString;
 function getControlPointsFromVec2Array(array) {
     return array.map(v => ({ x: v[0], alpha: v[1] }));
 }
-exports.getControlPointsFromVec2Array = getControlPointsFromVec2Array;
 function createTransferFunctionTexture(controlPoints, texture) {
     const cp = [
         { x: 0, alpha: 0 },
@@ -56,4 +56,3 @@ function createTransferFunctionTexture(controlPoints, texture) {
         return mol_util_1.ValueCell.create(textureImage);
     }
 }
-exports.createTransferFunctionTexture = createTransferFunctionTexture;

package/lib/commonjs/mol-geo/geometry/emissive-data.js

@@ -5,7 +5,11 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.createEmptyEmissive = exports.createEmissive = exports.clearEmissive = exports.getEmissiveAverage = exports.applyEmissiveValue = void 0;
+exports.applyEmissiveValue = applyEmissiveValue;
+exports.getEmissiveAverage = getEmissiveAverage;
+exports.clearEmissive = clearEmissive;
+exports.createEmissive = createEmissive;
+exports.createEmptyEmissive = createEmptyEmissive;
 const value_cell_1 = require("../../mol-util/value-cell");
 const linear_algebra_1 = require("../../mol-math/linear-algebra");
 const util_1 = require("../../mol-gl/renderable/util");
@@ -16,7 +20,6 @@ function applyEmissiveValue(array, start, end, value) {
     }
     return true;
 }
-exports.applyEmissiveValue = applyEmissiveValue;
 function getEmissiveAverage(array, count) {
     if (count === 0 || array.length < count)
         return 0;
@@ -26,11 +29,9 @@ function getEmissiveAverage(array, count) {
     }
     return sum / (255 * count);
 }
-exports.getEmissiveAverage = getEmissiveAverage;
 function clearEmissive(array, start, end) {
     array.fill(0, start, end);
 }
-exports.clearEmissive = clearEmissive;
 function createEmissive(count, type, emissiveData) {
     const emissive = (0, util_1.createTextureImage)(Math.max(1, count), 1, Uint8Array, emissiveData && emissiveData.tEmissive.ref.value.array);
     if (emissiveData) {
@@ -55,7 +56,6 @@ function createEmissive(count, type, emissiveData) {
         };
     }
 }
-exports.createEmissive = createEmissive;
 const emptyEmissiveTexture = { array: new Uint8Array(1), width: 1, height: 1 };
 function createEmptyEmissive(emissiveData) {
     if (emissiveData) {
@@ -77,4 +77,3 @@ function createEmptyEmissive(emissiveData) {
         };
     }
 }
-exports.createEmptyEmissive = createEmptyEmissive;

package/lib/commonjs/mol-geo/geometry/image/image.d.ts

@@ -16,7 +16,7 @@ export declare const InterpolationTypes: {
     bspline: string;
 };
 export type InterpolationTypes = keyof typeof InterpolationTypes;
-export declare const InterpolationTypeNames: ("nearest" | "bspline" | "catmulrom" | "mitchell")[];
+export declare const InterpolationTypeNames: InterpolationTypes[];
 export { Image };
 interface Image {
     readonly kind: 'image';

package/lib/commonjs/mol-geo/geometry/marker-data.js

@@ -5,7 +5,9 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.createEmptyMarkers = exports.createMarkers = exports.getMarkersAverage = void 0;
+exports.getMarkersAverage = getMarkersAverage;
+exports.createMarkers = createMarkers;
+exports.createEmptyMarkers = createEmptyMarkers;
 const value_cell_1 = require("../../mol-util/value-cell");
 const linear_algebra_1 = require("../../mol-math/linear-algebra");
 const util_1 = require("../../mol-gl/renderable/util");
@@ -55,7 +57,6 @@ function getMarkersAverage(array, count) {
     }
     return sum / count;
 }
-exports.getMarkersAverage = getMarkersAverage;
 function createMarkers(count, type, markerData) {
     const markers = (0, util_1.createTextureImage)(Math.max(1, count), 1, Uint8Array, markerData && markerData.tMarker.ref.value.array);
     const average = getMarkersAverage(markers.array, count);
@@ -80,7 +81,6 @@ function createMarkers(count, type, markerData) {
         };
     }
 }
-exports.createMarkers = createMarkers;
 const emptyMarkerTexture = { array: new Uint8Array(1), width: 1, height: 1 };
 function createEmptyMarkers(markerData) {
     if (markerData) {
@@ -102,4 +102,3 @@ function createEmptyMarkers(markerData) {
         };
     }
 }
-exports.createEmptyMarkers = createEmptyMarkers;

package/lib/commonjs/mol-geo/geometry/mesh/builder/axes.js

@@ -5,7 +5,7 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.addAxes = void 0;
+exports.addAxes = addAxes;
 const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
 const mesh_builder_1 = require("../mesh-builder");
 const geometry_1 = require("../../../../mol-math/geometry");
@@ -28,4 +28,3 @@ function addAxes(state, axes, radiusScale, detail, radialSegments) {
     const radius = (Math.cbrt(volume) / 300) * radiusScale;
     mesh_builder_1.MeshBuilder.addCage(state, tmpMatrix, cage, radius, detail, radialSegments);
 }
-exports.addAxes = addAxes;

package/lib/commonjs/mol-geo/geometry/mesh/builder/box.js

@@ -5,7 +5,8 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.addOrientedBox = exports.addBoundingBox = void 0;
+exports.addBoundingBox = addBoundingBox;
+exports.addOrientedBox = addOrientedBox;
 const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
 const geometry_1 = require("../../../../mol-math/geometry");
 const mesh_builder_1 = require("../mesh-builder");
@@ -57,7 +58,6 @@ function addBoundingBox(state, box, radius, detail, radialSegments) {
     (0, sphere_1.addSphere)(state, tmpEnd, radius, detail);
     (0, cylinder_1.addCylinder)(state, tmpStart, tmpEnd, 1, cylinderProps);
 }
-exports.addBoundingBox = addBoundingBox;
 //
 const tmpBoxVecCorner = (0, linear_algebra_1.Vec3)();
 const tmpBoxVecA = (0, linear_algebra_1.Vec3)();
@@ -96,4 +96,3 @@ function addOrientedBox(state, axes, radiusScale, detail, radialSegments) {
     const radius = (Math.cbrt(volume) / 300) * radiusScale;
     mesh_builder_1.MeshBuilder.addCage(state, tmpMatrix, cage, radius, detail, radialSegments);
 }
-exports.addOrientedBox = addOrientedBox;

package/lib/commonjs/mol-geo/geometry/mesh/builder/cylinder.js

@@ -6,7 +6,10 @@
  * @author Gianluca Tomasello <giagitom@gmail.com>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.addFixedCountDashedCylinder = exports.addDoubleCylinder = exports.addCylinder = exports.addSimpleCylinder = void 0;
+exports.addSimpleCylinder = addSimpleCylinder;
+exports.addCylinder = addCylinder;
+exports.addDoubleCylinder = addDoubleCylinder;
+exports.addFixedCountDashedCylinder = addFixedCountDashedCylinder;
 const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
 const mesh_builder_1 = require("../mesh-builder");
 const primitive_1 = require("../../../primitive/primitive");
@@ -74,14 +77,12 @@ function addSimpleCylinder(state, start, end, props) {
     setCylinderMat(tmpCylinderMat, start, tmpCylinderDir, d, false);
     mesh_builder_1.MeshBuilder.addPrimitive(state, tmpCylinderMat, getCylinder(props));
 }
-exports.addSimpleCylinder = addSimpleCylinder;
 function addCylinder(state, start, end, lengthScale, props) {
     const d = linear_algebra_1.Vec3.distance(start, end) * lengthScale;
     linear_algebra_1.Vec3.sub(tmpCylinderDir, end, start);
     setCylinderMat(tmpCylinderMat, start, tmpCylinderDir, d, true);
     mesh_builder_1.MeshBuilder.addPrimitive(state, tmpCylinderMat, getCylinder(props));
 }
-exports.addCylinder = addCylinder;
 function addDoubleCylinder(state, start, end, lengthScale, shift, props) {
     const d = linear_algebra_1.Vec3.distance(start, end) * lengthScale;
     const cylinder = getCylinder(props);
@@ -95,7 +96,6 @@ function addDoubleCylinder(state, start, end, lengthScale, shift, props) {
     setCylinderMat(tmpCylinderMat, tmpCylinderStart, tmpCylinderDir, d, true);
     mesh_builder_1.MeshBuilder.addPrimitive(state, tmpCylinderMat, cylinder);
 }
-exports.addDoubleCylinder = addDoubleCylinder;
 function addFixedCountDashedCylinder(state, start, end, lengthScale, segmentCount, stubCap, props) {
     const d = linear_algebra_1.Vec3.distance(start, end) * lengthScale;
     const isOdd = segmentCount % 2 !== 0;
@@ -118,4 +118,3 @@ function addFixedCountDashedCylinder(state, start, end, lengthScale, segmentCoun
         linear_algebra_1.Vec3.add(tmpCylinderStart, tmpCylinderStart, tmpCylinderDir);
     }
 }
-exports.addFixedCountDashedCylinder = addFixedCountDashedCylinder;

package/lib/commonjs/mol-geo/geometry/mesh/builder/ellipsoid.js

@@ -5,7 +5,7 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.addEllipsoid = void 0;
+exports.addEllipsoid = addEllipsoid;
 const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
 const mesh_builder_1 = require("../mesh-builder");
 const sphere_1 = require("./sphere");
@@ -20,4 +20,3 @@ function setEllipsoidMat(m, center, dirMajor, dirMinor, radiusScale) {
 function addEllipsoid(state, center, dirMajor, dirMinor, radiusScale, detail) {
     mesh_builder_1.MeshBuilder.addPrimitive(state, setEllipsoidMat(tmpEllipsoidMat, center, dirMajor, dirMinor, radiusScale), (0, sphere_1.getSphere)(detail));
 }
-exports.addEllipsoid = addEllipsoid;

package/lib/commonjs/mol-geo/geometry/mesh/builder/ribbon.js

@@ -6,7 +6,7 @@
  * @author David Sehnal <david.sehnal@gmail.com>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.addRibbon = void 0;
+exports.addRibbon = addRibbon;
 const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
 const util_1 = require("../../../../mol-data/util");
 // avoiding namespace lookup improved performance in Chrome (Aug 2020)
@@ -81,4 +81,3 @@ function addRibbon(state, controlPoints, normalVectors, binormalVectors, linearS
     for (let i = 0, il = addedVertexCount; i < il; ++i)
         caAdd(groups, currentGroup);
 }
-exports.addRibbon = addRibbon;

package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.js

@@ -6,7 +6,7 @@
  * @author David Sehnal <david.sehnal@gmail.com>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.addSheet = void 0;
+exports.addSheet = addSheet;
 const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
 const util_1 = require("../../../../mol-data/util");
 const tA = (0, linear_algebra_1.Vec3)();
@@ -183,4 +183,3 @@ function addSheet(state, controlPoints, normalVectors, binormalVectors, linearSe
     for (let i = 0, il = addedVertexCount; i < il; ++i)
         caAdd(groups, currentGroup);
 }
-exports.addSheet = addSheet;

package/lib/commonjs/mol-geo/geometry/mesh/builder/sphere.js

@@ -5,7 +5,8 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.addSphere = exports.getSphere = void 0;
+exports.getSphere = getSphere;
+exports.addSphere = addSphere;
 const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
 const mesh_builder_1 = require("../mesh-builder");
 const sphere_1 = require("../../../primitive/sphere");
@@ -22,8 +23,6 @@ function getSphere(detail) {
     }
     return sphere;
 }
-exports.getSphere = getSphere;
 function addSphere(state, center, radius, detail) {
     mesh_builder_1.MeshBuilder.addPrimitive(state, setSphereMat(tmpSphereMat, center, radius), getSphere(detail));
 }
-exports.addSphere = addSphere;

package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js

@@ -6,7 +6,7 @@
  * @author David Sehnal <david.sehnal@gmail.com>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.addTube = void 0;
+exports.addTube = addTube;
 const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
 const util_1 = require("../../../../mol-data/util");
 const normalVector = (0, linear_algebra_1.Vec3)();
@@ -171,4 +171,3 @@ function addTube(state, controlPoints, normalVectors, binormalVectors, linearSeg
     const addedVertexCount = (linearSegments + 1) * radialSegments + (startCap ? radialSegments + 1 : 0) + (endCap ? radialSegments + 1 : 0);
     util_1.ChunkedArray.addRepeat(groups, addedVertexCount, currentGroup);
 }
-exports.addTube = addTube;

package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js

@@ -5,7 +5,13 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.applyMeshSubstanceSmoothing = exports.applyMeshEmissiveSmoothing = exports.applyMeshTransparencySmoothing = exports.applyMeshOverpaintSmoothing = exports.applyMeshColorSmoothing = exports.getTrilinearlyInterpolated = exports.calcMeshColorSmoothing = void 0;
+exports.calcMeshColorSmoothing = calcMeshColorSmoothing;
+exports.getTrilinearlyInterpolated = getTrilinearlyInterpolated;
+exports.applyMeshColorSmoothing = applyMeshColorSmoothing;
+exports.applyMeshOverpaintSmoothing = applyMeshOverpaintSmoothing;
+exports.applyMeshTransparencySmoothing = applyMeshTransparencySmoothing;
+exports.applyMeshEmissiveSmoothing = applyMeshEmissiveSmoothing;
+exports.applyMeshSubstanceSmoothing = applyMeshSubstanceSmoothing;
 const util_1 = require("../../../mol-gl/renderable/util");
 const geometry_1 = require("../../../mol-math/geometry");
 const interpolate_1 = require("../../../mol-math/interpolate");
@@ -115,7 +121,6 @@ function calcMeshColorSmoothing(input, resolution, stride, webgl, texture) {
         };
     }
 }
-exports.calcMeshColorSmoothing = calcMeshColorSmoothing;
 function getTrilinearlyInterpolated(input) {
     const { vertexCount, positionBuffer, transformBuffer, grid, gridDim, gridTexDim, gridTransform, vertexStride, colorStride } = input;
     const itemOffset = input.itemOffset || 0;
@@ -186,7 +191,6 @@ function getTrilinearlyInterpolated(input) {
     }
     return image;
 }
-exports.getTrilinearlyInterpolated = getTrilinearlyInterpolated;
 //
 function isSupportedColorType(x) {
     return x === 'group' || x === 'groupInstance';
@@ -221,7 +225,6 @@ function applyMeshColorSmoothing(values, resolution, stride, webgl, colorTexture
         mol_util_1.ValueCell.update(values.uColorTexDim, smoothingData.texDim);
     }
 }
-exports.applyMeshColorSmoothing = applyMeshColorSmoothing;
 function isSupportedOverpaintType(x) {
     return x === 'groupInstance';
 }
@@ -255,7 +258,6 @@ function applyMeshOverpaintSmoothing(values, resolution, stride, webgl, colorTex
         mol_util_1.ValueCell.update(values.uOverpaintTexDim, smoothingData.texDim);
     }
 }
-exports.applyMeshOverpaintSmoothing = applyMeshOverpaintSmoothing;
 function isSupportedTransparencyType(x) {
     return x === 'groupInstance';
 }
@@ -289,7 +291,6 @@ function applyMeshTransparencySmoothing(values, resolution, stride, webgl, color
         mol_util_1.ValueCell.update(values.uTransparencyTexDim, smoothingData.texDim);
     }
 }
-exports.applyMeshTransparencySmoothing = applyMeshTransparencySmoothing;
 function isSupportedEmissiveType(x) {
     return x === 'groupInstance';
 }
@@ -323,7 +324,6 @@ function applyMeshEmissiveSmoothing(values, resolution, stride, webgl, colorText
         mol_util_1.ValueCell.update(values.uEmissiveTexDim, smoothingData.texDim);
     }
 }
-exports.applyMeshEmissiveSmoothing = applyMeshEmissiveSmoothing;
 function isSupportedSubstanceType(x) {
     return x === 'groupInstance';
 }
@@ -357,4 +357,3 @@ function applyMeshSubstanceSmoothing(values, resolution, stride, webgl, colorTex
         mol_util_1.ValueCell.update(values.uSubstanceTexDim, smoothingData.texDim);
     }
 }
-exports.applyMeshSubstanceSmoothing = applyMeshSubstanceSmoothing;

package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts

@@ -63,6 +63,7 @@ export declare namespace Mesh {
         flipSided: PD.BooleanParam;
         flatShaded: PD.BooleanParam;
         ignoreLight: PD.BooleanParam;
+        celShaded: PD.BooleanParam;
         xrayShaded: PD.Select<boolean | "inverted">;
         transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
         bumpFrequency: PD.Numeric;