molstar 2.3.3 → 2.3.5

package/lib/commonjs/mol-repr/structure/visual/element-cross.js

@@ -0,0 +1,77 @@
+"use strict";
+/**
+ * Copyright (c) 2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
+ *
+ * @author Alexander Rose <alexander.rose@weirdbyte.de>
+ */
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.ElementCrossVisual = exports.createElementCross = exports.ElementCrossParams = void 0;
+var tslib_1 = require("tslib");
+var param_definition_1 = require("../../../mol-util/param-definition");
+var units_visual_1 = require("../units-visual");
+var structure_1 = require("../../../mol-model/structure");
+var linear_algebra_1 = require("../../../mol-math/linear-algebra");
+var element_1 = require("./util/element");
+var geometry_1 = require("../../../mol-math/geometry");
+var lines_1 = require("../../../mol-geo/geometry/lines/lines");
+var lines_builder_1 = require("../../../mol-geo/geometry/lines/lines-builder");
+var util_1 = require("../../../mol-model-props/computed/chemistry/util");
+// avoiding namespace lookup improved performance in Chrome (Aug 2020)
+var v3scaleAndAdd = linear_algebra_1.Vec3.scaleAndAdd;
+var v3unitX = linear_algebra_1.Vec3.unitX;
+var v3unitY = linear_algebra_1.Vec3.unitY;
+var v3unitZ = linear_algebra_1.Vec3.unitZ;
+exports.ElementCrossParams = (0, tslib_1.__assign)((0, tslib_1.__assign)({}, units_visual_1.UnitsLinesParams), { lineSizeAttenuation: param_definition_1.ParamDefinition.Boolean(false), ignoreHydrogens: param_definition_1.ParamDefinition.Boolean(false), traceOnly: param_definition_1.ParamDefinition.Boolean(false), crosses: param_definition_1.ParamDefinition.Select('lone', param_definition_1.ParamDefinition.arrayToOptions(['lone', 'all'])), crossSize: param_definition_1.ParamDefinition.Numeric(0.35, { min: 0, max: 2, step: 0.01 }) });
+function createElementCross(ctx, unit, structure, theme, props, lines) {
+    var child = structure.child;
+    if (child && !child.unitMap.get(unit.id))
+        return lines_1.Lines.createEmpty(lines);
+    var elements = unit.elements;
+    var n = elements.length;
+    var builder = lines_builder_1.LinesBuilder.create(n, n / 10, lines);
+    var p = (0, linear_algebra_1.Vec3)();
+    var s = (0, linear_algebra_1.Vec3)();
+    var e = (0, linear_algebra_1.Vec3)();
+    var pos = unit.conformation.invariantPosition;
+    var ignore = (0, element_1.makeElementIgnoreTest)(structure, unit, props);
+    var r = props.crossSize / 2;
+    var lone = props.crosses === 'lone';
+    for (var i = 0; i < n; ++i) {
+        if (ignore && ignore(elements[i]))
+            continue;
+        if (lone && structure_1.Unit.isAtomic(unit) && (0, util_1.bondCount)(structure, unit, i) !== 0)
+            continue;
+        pos(elements[i], p);
+        v3scaleAndAdd(s, p, v3unitX, r);
+        v3scaleAndAdd(e, p, v3unitX, -r);
+        builder.add(s[0], s[1], s[2], e[0], e[1], e[2], i);
+        v3scaleAndAdd(s, p, v3unitY, r);
+        v3scaleAndAdd(e, p, v3unitY, -r);
+        builder.add(s[0], s[1], s[2], e[0], e[1], e[2], i);
+        v3scaleAndAdd(s, p, v3unitZ, r);
+        v3scaleAndAdd(e, p, v3unitZ, -r);
+        builder.add(s[0], s[1], s[2], e[0], e[1], e[2], i);
+    }
+    var l = builder.getLines();
+    var sphere = geometry_1.Sphere3D.expand((0, geometry_1.Sphere3D)(), unit.boundary.sphere, 1 * props.sizeFactor);
+    l.setBoundingSphere(sphere);
+    return l;
+}
+exports.createElementCross = createElementCross;
+function ElementCrossVisual(materialId) {
+    return (0, units_visual_1.UnitsLinesVisual)({
+        defaultProps: param_definition_1.ParamDefinition.getDefaultValues(exports.ElementCrossParams),
+        createGeometry: createElementCross,
+        createLocationIterator: element_1.ElementIterator.fromGroup,
+        getLoci: element_1.getElementLoci,
+        eachLocation: element_1.eachElement,
+        setUpdateState: function (state, newProps, currentProps) {
+            state.createGeometry = (newProps.ignoreHydrogens !== currentProps.ignoreHydrogens ||
+                newProps.traceOnly !== currentProps.traceOnly ||
+                newProps.crosses !== currentProps.crosses ||
+                newProps.crossSize !== currentProps.crossSize);
+        }
+    }, materialId);
+}
+exports.ElementCrossVisual = ElementCrossVisual;
+//# sourceMappingURL=element-cross.js.map

package/lib/commonjs/mol-repr/structure/visual/element-cross.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"element-cross.js","sourceRoot":"","sources":["../../../../../src/mol-repr/structure/visual/element-cross.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAEH,uEAA2E;AAC3E,gDAAkF;AAElF,0DAAiF;AAEjF,mEAAwD;AACxD,0CAAqG;AAErG,uDAAsD;AACtD,+DAA8D;AAC9D,+EAA6E;AAC7E,yEAA6E;AAE7E,sEAAsE;AACtE,IAAM,aAAa,GAAG,qBAAI,CAAC,WAAW,CAAC;AACvC,IAAM,OAAO,GAAG,qBAAI,CAAC,KAAK,CAAC;AAC3B,IAAM,OAAO,GAAG,qBAAI,CAAC,KAAK,CAAC;AAC3B,IAAM,OAAO,GAAG,qBAAI,CAAC,KAAK,CAAC;AAEd,QAAA,kBAAkB,mDACxB,+BAAgB,KACnB,mBAAmB,EAAE,kCAAE,CAAC,OAAO,CAAC,KAAK,CAAC,EACtC,eAAe,EAAE,kCAAE,CAAC,OAAO,CAAC,KAAK,CAAC,EAClC,SAAS,EAAE,kCAAE,CAAC,OAAO,CAAC,KAAK,CAAC,EAC5B,OAAO,EAAE,kCAAE,CAAC,MAAM,CAAC,MAAM,EAAE,kCAAE,CAAC,cAAc,CAAC,CAAC,MAAM,EAAE,KAAK,CAAU,CAAC,CAAC,EACvE,SAAS,EAAE,kCAAE,CAAC,OAAO,CAAC,IAAI,EAAE,EAAE,GAAG,EAAE,CAAC,EAAE,GAAG,EAAE,CAAC,EAAE,IAAI,EAAE,IAAI,EAAE,CAAC,IAC7D;AAGF,SAAgB,kBAAkB,CAAC,GAAkB,EAAE,IAAU,EAAE,SAAoB,EAAE,KAAY,EAAE,KAAoC,EAAE,KAAY;IAC7I,IAAA,KAAK,GAAK,SAAS,MAAd,CAAe;IAC5B,IAAI,KAAK,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC;QAAE,OAAO,aAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAC;IAE1E,IAAM,QAAQ,GAAG,IAAI,CAAC,QAAQ,CAAC;IAC/B,IAAM,CAAC,GAAG,QAAQ,CAAC,MAAM,CAAC;IAC1B,IAAM,OAAO,GAAG,4BAAY,CAAC,MAAM,CAAC,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,KAAK,CAAC,CAAC;IAEtD,IAAM,CAAC,GAAG,IAAA,qBAAI,GAAE,CAAC;IACjB,IAAM,CAAC,GAAG,IAAA,qBAAI,GAAE,CAAC;IACjB,IAAM,CAAC,GAAG,IAAA,qBAAI,GAAE,CAAC;IAEjB,IAAM,GAAG,GAAG,IAAI,CAAC,YAAY,CAAC,iBAAiB,CAAC;IAChD,IAAM,MAAM,GAAG,IAAA,+BAAqB,EAAC,SAAS,EAAE,IAAI,EAAE,KAAK,CAAC,CAAC;IAE7D,IAAM,CAAC,GAAG,KAAK,CAAC,SAAS,GAAG,CAAC,CAAC;IAC9B,IAAM,IAAI,GAAG,KAAK,CAAC,OAAO,KAAK,MAAM,CAAC;IAEtC,KAAK,IAAI,CAAC,GAAG,CAA+B,EAAE,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC,EAAE;QACtD,IAAI,MAAM,IAAI,MAAM,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;YAAE,SAAS;QAC5C,IAAI,IAAI,IAAI,gBAAI,CAAC,QAAQ,CAAC,IAAI,CAAC,IAAI,IAAA,gBAAS,EAAC,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC,KAAK,CAAC;YAAE,SAAS;QAEjF,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;QACpB,aAAa,CAAC,CAAC,EAAE,CAAC,EAAE,OAAO,EAAE,CAAC,CAAC,CAAC;QAChC,aAAa,CAAC,CAAC,EAAE,CAAC,EAAE,OAAO,EAAE,CAAC,CAAC,CAAC,CAAC;QACjC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;QACnD,aAAa,CAAC,CAAC,EAAE,CAAC,EAAE,OAAO,EAAE,CAAC,CAAC,CAAC;QAChC,aAAa,CAAC,CAAC,EAAE,CAAC,EAAE,OAAO,EAAE,CAAC,CAAC,CAAC,CAAC;QACjC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;QACnD,aAAa,CAAC,CAAC,EAAE,CAAC,EAAE,OAAO,EAAE,CAAC,CAAC,CAAC;QAChC,aAAa,CAAC,CAAC,EAAE,CAAC,EAAE,OAAO,EAAE,CAAC,CAAC,CAAC,CAAC;QACjC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;KACtD;IAED,IAAM,CAAC,GAAG,OAAO,CAAC,QAAQ,EAAE,CAAC;IAE7B,IAAM,MAAM,GAAG,mBAAQ,CAAC,MAAM,CAAC,IAAA,mBAAQ,GAAE,EAAE,IAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAC,GAAG,KAAK,CAAC,UAAU,CAAC,CAAC;IACvF,CAAC,CAAC,iBAAiB,CAAC,MAAM,CAAC,CAAC;IAE5B,OAAO,CAAC,CAAC;AACb,CAAC;AAxCD,gDAwCC;AAED,SAAgB,kBAAkB,CAAC,UAAkB;IACjD,OAAO,IAAA,+BAAgB,EAAqB;QACxC,YAAY,EAAE,kCAAE,CAAC,gBAAgB,CAAC,0BAAkB,CAAC;QACrD,cAAc,EAAE,kBAAkB;QAClC,sBAAsB,EAAE,yBAAe,CAAC,SAAS;QACjD,OAAO,EAAE,wBAAc;QACvB,YAAY,EAAE,qBAAW;QACzB,cAAc,EAAE,UAAC,KAAwB,EAAE,QAAuC,EAAE,YAA2C;YAC3H,KAAK,CAAC,cAAc,GAAG,CACnB,QAAQ,CAAC,eAAe,KAAK,YAAY,CAAC,eAAe;gBACzD,QAAQ,CAAC,SAAS,KAAK,YAAY,CAAC,SAAS;gBAC7C,QAAQ,CAAC,OAAO,KAAK,YAAY,CAAC,OAAO;gBACzC,QAAQ,CAAC,SAAS,KAAK,YAAY,CAAC,SAAS,CAChD,CAAC;QACN,CAAC;KACJ,EAAE,UAAU,CAAC,CAAC;AACnB,CAAC;AAhBD,gDAgBC"}

package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.d.ts

@@ -22,7 +22,7 @@ export declare const GaussianDensityVolumeParams: {
     renderMode: PD.Mapped<PD.NamedParams<PD.Normalize<{
         controlPoints: import("../../../mol-math/linear-algebra/3d/vec2").Vec2[];
         list: {
-            kind: "interpolate" | "set";
+            kind: "set" | "interpolate";
             colors: import("../../../mol-util/color/color").ColorListEntry[];
         };
     }>, "volume"> | PD.NamedParams<PD.Normalize<{
@@ -58,7 +58,7 @@ export declare const UnitsGaussianDensityVolumeParams: {
     renderMode: PD.Mapped<PD.NamedParams<PD.Normalize<{
         controlPoints: import("../../../mol-math/linear-algebra/3d/vec2").Vec2[];
         list: {
-            kind: "interpolate" | "set";
+            kind: "set" | "interpolate";
             colors: import("../../../mol-util/color/color").ColorListEntry[];
         };
     }>, "volume"> | PD.NamedParams<PD.Normalize<{

package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts

@@ -12,10 +12,10 @@ export declare const GaussianSurfaceMeshParams: {
     ignoreHydrogens: PD.BooleanParam;
     tryUseGpu: PD.BooleanParam;
     includeParent: PD.BooleanParam;
-    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
+    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
         resolutionFactor: number;
         sampleStride: number;
-    }>, "on">>;
+    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
     traceOnly: PD.BooleanParam;
     resolution: PD.Numeric;
     radiusOffset: PD.Numeric;
@@ -34,10 +34,10 @@ export declare const StructureGaussianSurfaceMeshParams: {
     ignoreHydrogens: PD.BooleanParam;
     tryUseGpu: PD.BooleanParam;
     includeParent: PD.BooleanParam;
-    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
+    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
         resolutionFactor: number;
         sampleStride: number;
-    }>, "on">>;
+    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
     traceOnly: PD.BooleanParam;
     resolution: PD.Numeric;
     radiusOffset: PD.Numeric;
@@ -56,10 +56,10 @@ export declare function GaussianSurfaceVisual(materialId: number, structure: Str
     ignoreHydrogens: PD.BooleanParam;
     tryUseGpu: PD.BooleanParam;
     includeParent: PD.BooleanParam;
-    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
+    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
         resolutionFactor: number;
         sampleStride: number;
-    }>, "on">>;
+    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
     traceOnly: PD.BooleanParam;
     resolution: PD.Numeric;
     radiusOffset: PD.Numeric;
@@ -77,10 +77,10 @@ export declare function StructureGaussianSurfaceVisual(materialId: number, struc
     ignoreHydrogens: PD.BooleanParam;
     tryUseGpu: PD.BooleanParam;
     includeParent: PD.BooleanParam;
-    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
+    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
         resolutionFactor: number;
         sampleStride: number;
-    }>, "on">>;
+    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
     traceOnly: PD.BooleanParam;
     resolution: PD.Numeric;
     radiusOffset: PD.Numeric;

package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts

@@ -6,10 +6,10 @@
 import { ParamDefinition as PD } from '../../../mol-util/param-definition';
 import { UnitsVisual } from '../units-visual';
 export declare const MolecularSurfaceMeshParams: {
-    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
+    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
         resolutionFactor: number;
         sampleStride: number;
-    }>, "on">>;
+    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
     ignoreHydrogens: PD.BooleanParam;
     traceOnly: PD.BooleanParam;
     includeParent: PD.BooleanParam;

package/lib/commonjs/mol-repr/structure/visual/util/bond.d.ts

@@ -12,24 +12,27 @@ import { Loci } from '../../../../mol-model/loci';
 import { Interval } from '../../../../mol-data/int';
 import { StructureGroup } from './common';
 export declare const BondParams: {
-    includeTypes: PD.MultiSelect<"computed" | "covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic">;
-    excludeTypes: PD.MultiSelect<"computed" | "covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic">;
+    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
+    multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
 };
 export declare const DefaultBondProps: PD.Values<{
-    includeTypes: PD.MultiSelect<"computed" | "covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic">;
-    excludeTypes: PD.MultiSelect<"computed" | "covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic">;
+    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
+    multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
 }>;
 export declare type BondProps = typeof DefaultBondProps;
 export declare const BondCylinderParams: {
     adjustCylinderLength: PD.BooleanParam;
-    includeTypes: PD.MultiSelect<"computed" | "covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic">;
-    excludeTypes: PD.MultiSelect<"computed" | "covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic">;
+    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
+    multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     linkCap: PD.BooleanParam;
@@ -41,10 +44,11 @@ export declare const BondCylinderParams: {
 };
 export declare const DefaultBondCylinderProps: PD.Values<{
     adjustCylinderLength: PD.BooleanParam;
-    includeTypes: PD.MultiSelect<"computed" | "covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic">;
-    excludeTypes: PD.MultiSelect<"computed" | "covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic">;
+    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
+    multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     linkCap: PD.BooleanParam;
@@ -56,19 +60,21 @@ export declare const DefaultBondCylinderProps: PD.Values<{
 }>;
 export declare type BondCylinderProps = typeof DefaultBondCylinderProps;
 export declare const BondLineParams: {
-    includeTypes: PD.MultiSelect<"computed" | "covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic">;
-    excludeTypes: PD.MultiSelect<"computed" | "covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic">;
+    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
+    multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     dashCount: PD.Numeric;
 };
 export declare const DefaultBondLineProps: PD.Values<{
-    includeTypes: PD.MultiSelect<"computed" | "covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic">;
-    excludeTypes: PD.MultiSelect<"computed" | "covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic">;
+    includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
+    excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
     ignoreHydrogens: PD.BooleanParam;
     aromaticBonds: PD.BooleanParam;
+    multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
     linkScale: PD.Numeric;
     linkSpacing: PD.Numeric;
     dashCount: PD.Numeric;
@@ -81,11 +87,11 @@ export declare namespace BondIterator {
     function fromGroup(structureGroup: StructureGroup): LocationIterator;
     function fromStructure(structure: Structure): LocationIterator;
 }
-export declare function getIntraBondLoci(pickingId: PickingId, structureGroup: StructureGroup, id: number): {
+export declare function getIntraBondLoci(pickingId: PickingId, structureGroup: StructureGroup, id: number): Bond.Loci | {
     kind: "empty-loci";
-} | Bond.Loci;
+};
 export declare function eachIntraBond(loci: Loci, structureGroup: StructureGroup, apply: (interval: Interval) => boolean, isMarking: boolean): boolean;
-export declare function getInterBondLoci(pickingId: PickingId, structure: Structure, id: number): {
+export declare function getInterBondLoci(pickingId: PickingId, structure: Structure, id: number): Bond.Loci | {
     kind: "empty-loci";
-} | Bond.Loci;
+};
 export declare function eachInterBond(loci: Loci, structure: Structure, apply: (interval: Interval) => boolean, isMarking: boolean): boolean;

package/lib/commonjs/mol-repr/structure/visual/util/bond.js

@@ -21,6 +21,7 @@ exports.BondParams = {
     excludeTypes: param_definition_1.ParamDefinition.MultiSelect([], param_definition_1.ParamDefinition.objectToOptions(types_1.BondType.Names)),
     ignoreHydrogens: param_definition_1.ParamDefinition.Boolean(false),
     aromaticBonds: param_definition_1.ParamDefinition.Boolean(false, { description: 'Display aromatic bonds with dashes' }),
+    multipleBonds: param_definition_1.ParamDefinition.Select('symmetric', param_definition_1.ParamDefinition.arrayToOptions(['off', 'symmetric', 'offset'])),
 };
 exports.DefaultBondProps = param_definition_1.ParamDefinition.getDefaultValues(exports.BondParams);
 exports.BondCylinderParams = (0, tslib_1.__assign)((0, tslib_1.__assign)((0, tslib_1.__assign)({}, link_1.LinkCylinderParams), exports.BondParams), { adjustCylinderLength: param_definition_1.ParamDefinition.Boolean(true, { description: 'Shorten cylinders to reduce overlap with spheres.' }) });

package/lib/commonjs/mol-repr/structure/visual/util/bond.js.map

@@ -1 +1 @@
-{"version":3,"file":"bond.js","sourceRoot":"","sources":["../../../../../../src/mol-repr/structure/visual/util/bond.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAEH,qEAAuE;AACvE,6DAA0F;AAC1F,0EAA8E;AAC9E,gFAA8E;AAC9E,+BAA4D;AAC5D,kEAA+D;AAE/D,mDAA6D;AAC7D,gDAA6E;AAC7E,mCAA2D;AAE9C,QAAA,UAAU,GAAG;IACtB,YAAY,EAAE,kCAAE,CAAC,WAAW,CAAC,IAAA,yBAAU,EAAC,gBAAQ,CAAC,KAAK,CAAC,EAAE,kCAAE,CAAC,eAAe,CAAC,gBAAQ,CAAC,KAAK,CAAC,CAAC;IAC5F,YAAY,EAAE,kCAAE,CAAC,WAAW,CAAC,EAAsB,EAAE,kCAAE,CAAC,eAAe,CAAC,gBAAQ,CAAC,KAAK,CAAC,CAAC;IACxF,eAAe,EAAE,kCAAE,CAAC,OAAO,CAAC,KAAK,CAAC;IAClC,aAAa,EAAE,kCAAE,CAAC,OAAO,CAAC,KAAK,EAAE,EAAE,WAAW,EAAE,oCAAoC,EAAE,CAAC;CAC1F,CAAC;AACW,QAAA,gBAAgB,GAAG,kCAAE,CAAC,gBAAgB,CAAC,kBAAU,CAAC,CAAC;AAGnD,QAAA,kBAAkB,yEACxB,yBAAkB,GAClB,kBAAU,KACb,oBAAoB,EAAE,kCAAE,CAAC,OAAO,CAAC,IAAI,EAAE,EAAE,WAAW,EAAE,mDAAmD,EAAE,CAAC,IAC9G;AACW,QAAA,wBAAwB,GAAG,kCAAE,CAAC,gBAAgB,CAAC,0BAAkB,CAAC,CAAC;AAGnE,QAAA,cAAc,mDACpB,qBAAc,GACd,kBAAU,EACf;AACW,QAAA,oBAAoB,GAAG,kCAAE,CAAC,gBAAgB,CAAC,sBAAc,CAAC,CAAC;AAGxE,SAAgB,cAAc,CAAC,OAAsB,EAAE,OAAsB,EAAE,CAAgB;IAC3F,OAAO,CAAC,gBAAQ,CAAC,EAAE,CAAC,OAAO,EAAE,CAAC,CAAC,IAAI,gBAAQ,CAAC,EAAE,CAAC,OAAO,EAAE,CAAC,CAAC,CAAC;AAC/D,CAAC;AAFD,wCAEC;AAED,SAAgB,uBAAuB,CAAC,SAAoB,EAAE,IAAiB,EAAE,KAAgB;IAC7F,IAAM,QAAQ,GAAG,IAAI,CAAC,QAAQ,CAAC;IACvB,IAAA,YAAY,GAAK,IAAI,CAAC,KAAK,CAAC,eAAe,CAAC,OAAO,CAAC,IAAI,aAA5C,CAA6C;IACjE,IAAM,KAAK,GAAG,IAAI,CAAC,KAAK,CAAC;IACjB,IAAA,CAAC,GAAmB,KAAK,EAAxB,EAAE,CAAC,GAAgB,KAAK,EAArB,EAAE,SAAS,GAAK,KAAK,UAAV,CAAW;IAC1B,IAAO,MAAM,GAAK,SAAS,MAAd,CAAe;IAE5B,IAAA,eAAe,GAAiC,KAAK,gBAAtC,EAAE,YAAY,GAAmB,KAAK,aAAxB,EAAE,YAAY,GAAK,KAAK,aAAV,CAAW;IAE9D,IAAM,OAAO,GAAG,gBAAQ,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC;IACjD,IAAM,OAAO,GAAG,gBAAQ,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC;IACjD,IAAM,YAAY,GAAG,gBAAQ,CAAC,KAAK,CAAC,OAAO,CAAC,IAAI,iBAAuB,OAAO,CAAC;IAEvE,IAAA,KAAK,GAAK,SAAS,MAAd,CAAe;IAC5B,IAAM,SAAS,GAAG,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAC9C,IAAI,KAAK,IAAI,CAAC,SAAS;QAAE,MAAM,IAAI,KAAK,CAAC,6CAA6C,CAAC,CAAC;IAExF,IAAI,YAAY,IAAI,CAAC,eAAe,IAAI,CAAC,KAAK;QAAE,OAAO;IAEvD,OAAO,UAAC,SAAiB;QACrB,OAAO,CACH,CAAC,CAAC,CAAC,SAAS,IAAI,CAAC,iBAAW,CAAC,GAAG,CAAC,SAAS,CAAC,QAAQ,EAAE,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;YAC7E,CAAC,eAAe,IAAI,CAAC,IAAA,YAAG,EAAC,YAAY,EAAE,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,IAAI,IAAA,YAAG,EAAC,YAAY,EAAE,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC;YAC7G,CAAC,CAAC,YAAY,IAAI,cAAc,CAAC,OAAO,EAAE,OAAO,EAAE,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,CACzE,CAAC;IACN,CAAC,CAAC;AACN,CAAC;AA1BD,0DA0BC;AAED,SAAgB,uBAAuB,CAAC,SAAoB,EAAE,KAAgB;IAC1E,IAAM,KAAK,GAAG,SAAS,CAAC,cAAc,CAAC;IAC/B,IAAA,KAAK,GAAK,KAAK,MAAV,CAAW;IAEhB,IAAA,eAAe,GAAiC,KAAK,gBAAtC,EAAE,YAAY,GAAmB,KAAK,aAAxB,EAAE,YAAY,GAAK,KAAK,aAAV,CAAW;IAE9D,IAAM,OAAO,GAAG,gBAAQ,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC;IACjD,IAAM,OAAO,GAAG,gBAAQ,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC;IACjD,IAAM,YAAY,GAAG,gBAAQ,CAAC,KAAK,CAAC,OAAO,CAAC,IAAI,iBAAuB,OAAO,CAAC;IAEvE,IAAA,KAAK,GAAK,SAAS,MAAd,CAAe;IAE5B,IAAI,YAAY,IAAI,CAAC,eAAe,IAAI,CAAC,KAAK;QAAE,OAAO;IAEvD,OAAO,UAAC,SAAiB;QACrB,IAAI,KAAK,EAAE;YACP,IAAM,CAAC,GAAG,KAAK,CAAC,SAAS,CAAC,CAAC;YAC3B,IAAM,UAAU,GAAG,KAAK,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAC9C,IAAI,CAAC,UAAU;gBAAE,OAAO,IAAI,CAAC;YAE7B,IAAM,KAAK,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAC7C,IAAM,EAAE,GAAG,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC;YACpC,IAAI,CAAC,iBAAW,CAAC,GAAG,CAAC,UAAU,CAAC,QAAQ,EAAE,EAAE,CAAC;gBAAE,OAAO,IAAI,CAAC;SAC9D;QAED,IAAI,eAAe,EAAE;YACjB,IAAM,CAAC,GAAG,KAAK,CAAC,SAAS,CAAC,CAAC;YAC3B,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAC1C,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAC1C,IAAI,IAAA,mBAAU,EAAC,EAAE,EAAE,EAAE,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,IAAI,IAAA,mBAAU,EAAC,EAAE,EAAE,EAAE,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC;gBAAE,OAAO,IAAI,CAAC;SACnG;QAED,IAAI,CAAC,YAAY,EAAE;YACf,IAAI,cAAc,CAAC,OAAO,EAAE,OAAO,EAAE,KAAK,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC;gBAAE,OAAO,IAAI,CAAC;SAClF;QAED,OAAO,KAAK,CAAC;IACjB,CAAC,CAAC;AACN,CAAC;AAtCD,0DAsCC;AAED,IAAiB,YAAY,CAgC5B;AAhCD,WAAiB,YAAY;IACzB,SAAgB,SAAS,CAAC,cAA8B;QAC5C,IAAA,KAAK,GAAgB,cAAc,MAA9B,EAAE,SAAS,GAAK,cAAc,UAAnB,CAAoB;QAC5C,IAAM,IAAI,GAAG,KAAK,CAAC,KAAK,CAAC,CAAC,CAAgB,CAAC;QAC3C,IAAM,UAAU,GAAG,gBAAI,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,SAAS,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;QACtE,IAAM,aAAa,GAAG,KAAK,CAAC,KAAK,CAAC,MAAM,CAAC;QACzC,IAAM,QAAQ,GAAG,gBAAI,CAAC,QAAQ,CAAC,SAAS,EAAE,SAAS,EAAE,SAAS,EAAE,SAAS,EAAE,SAAS,EAAE,SAAS,CAAC,CAAC;QACjG,IAAM,WAAW,GAAG,UAAC,UAAkB,EAAE,aAAqB;YAC1D,IAAM,IAAI,GAAG,KAAK,CAAC,KAAK,CAAC,aAAa,CAAgB,CAAC;YACvD,QAAQ,CAAC,KAAK,GAAG,IAAI,CAAC;YACtB,QAAQ,CAAC,KAAK,GAAG,IAAI,CAAC;YACtB,QAAQ,CAAC,MAAM,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC;YAC3C,QAAQ,CAAC,MAAM,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC;YAC3C,OAAO,QAAQ,CAAC;QACpB,CAAC,CAAC;QACF,OAAO,IAAA,oCAAgB,EAAC,UAAU,EAAE,aAAa,EAAE,CAAC,EAAE,WAAW,CAAC,CAAC;IACvE,CAAC;IAfe,sBAAS,YAexB,CAAA;IAED,SAAgB,aAAa,CAAC,SAAoB;QAC9C,IAAM,UAAU,GAAG,SAAS,CAAC,cAAc,CAAC,SAAS,CAAC;QACtD,IAAM,aAAa,GAAG,CAAC,CAAC;QACxB,IAAM,QAAQ,GAAG,gBAAI,CAAC,QAAQ,CAAC,SAAS,EAAE,SAAS,EAAE,SAAS,EAAE,SAAS,EAAE,SAAS,EAAE,SAAS,CAAC,CAAC;QACjG,IAAM,WAAW,GAAG,UAAC,UAAkB;YACnC,IAAM,IAAI,GAAG,SAAS,CAAC,cAAc,CAAC,KAAK,CAAC,UAAU,CAAC,CAAC;YACxD,QAAQ,CAAC,KAAK,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;YACnD,QAAQ,CAAC,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC;YAC9B,QAAQ,CAAC,KAAK,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;YACnD,QAAQ,CAAC,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC;YAC9B,OAAO,QAAQ,CAAC;QACpB,CAAC,CAAC;QACF,OAAO,IAAA,oCAAgB,EAAC,UAAU,EAAE,aAAa,EAAE,CAAC,EAAE,WAAW,EAAE,IAAI,CAAC,CAAC;IAC7E,CAAC;IAbe,0BAAa,gBAa5B,CAAA;AACL,CAAC,EAhCgB,YAAY,GAAZ,oBAAY,KAAZ,oBAAY,QAgC5B;AAED,EAAE;AAEF,SAAgB,gBAAgB,CAAC,SAAoB,EAAE,cAA8B,EAAE,EAAU;IACrF,IAAA,QAAQ,GAA0B,SAAS,SAAnC,EAAE,UAAU,GAAc,SAAS,WAAvB,EAAE,OAAO,GAAK,SAAS,QAAd,CAAe;IACpD,IAAI,EAAE,KAAK,QAAQ,EAAE;QACT,IAAA,SAAS,GAAY,cAAc,UAA1B,EAAE,KAAK,GAAK,cAAc,MAAnB,CAAoB;QAC5C,IAAM,IAAI,GAAG,KAAK,CAAC,KAAK,CAAC,UAAU,CAAC,CAAC;QACrC,IAAI,gBAAI,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE;YACb,IAAA,MAAM,GAAK,SAAS,OAAd,CAAe;YAC7B,IAAM,EAAE,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;YACjC,IAAM,EAAE,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;YACjC,OAAO,gBAAI,CAAC,IAAI,CAAC,MAAM,EAAE;gBACrB,gBAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,IAAI,EAAE,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,EAAE,CAAC;gBACjD,gBAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,IAAI,EAAE,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,EAAE,CAAC;aACpD,CAAC,CAAC;SACN;KACJ;IACD,OAAO,gBAAS,CAAC;AACrB,CAAC;AAhBD,4CAgBC;AAED,SAAgB,aAAa,CAAC,IAAU,EAAE,cAA8B,EAAE,KAAsC,EAAE,SAAkB;IAChI,IAAI,OAAO,GAAG,KAAK,CAAC;IACpB,IAAI,gBAAI,CAAC,MAAM,CAAC,IAAI,CAAC,EAAE;QACX,IAAA,SAAS,GAAY,cAAc,UAA1B,EAAE,KAAK,GAAK,cAAc,MAAnB,CAAoB;QAC5C,IAAI,CAAC,qBAAS,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC;YAAE,OAAO,KAAK,CAAC;QACtE,IAAM,IAAI,GAAG,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;QAC5B,IAAI,CAAC,gBAAI,CAAC,QAAQ,CAAC,IAAI,CAAC;YAAE,OAAO,KAAK,CAAC;QACvC,IAAM,UAAU,GAAG,IAAI,CAAC,KAAK,CAAC,SAAS,GAAG,CAAC,CAAC;QAC5C,KAAgB,UAAU,EAAV,KAAA,IAAI,CAAC,KAAK,EAAV,cAAU,EAAV,IAAU,EAAE;YAAvB,IAAM,CAAC,SAAA;YACR,IAAI,CAAC,CAAC,KAAK,KAAK,CAAC,CAAC,KAAK;gBAAE,SAAS;YAClC,IAAM,OAAO,GAAG,KAAK,CAAC,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;YACnD,IAAI,OAAO,KAAK,SAAS,EAAE;gBACvB,IAAM,GAAG,GAAG,IAAI,CAAC,KAAK,CAAC,oBAAoB,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,MAAM,CAAC,CAAC;gBAChE,IAAI,GAAG,KAAK,CAAC,CAAC,EAAE;oBACZ,IAAI,KAAK,CAAC,cAAQ,CAAC,WAAW,CAAC,OAAO,GAAG,UAAU,GAAG,GAAG,CAAC,CAAC;wBAAE,OAAO,GAAG,IAAI,CAAC;iBAC/E;aACJ;SACJ;KACJ;SAAM,IAAI,4BAAgB,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,EAAE;QAC/B,IAAA,SAAS,GAAY,cAAc,UAA1B,EAAE,KAAK,GAAK,cAAc,MAAnB,CAAoB;QAC5C,IAAI,CAAC,qBAAS,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC;YAAE,OAAO,KAAK,CAAC;QACtE,IAAM,IAAI,GAAG,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;QAC5B,IAAI,CAAC,gBAAI,CAAC,QAAQ,CAAC,IAAI,CAAC;YAAE,OAAO,KAAK,CAAC;QACvC,IAAM,YAAU,GAAG,IAAI,CAAC,KAAK,CAAC,SAAS,GAAG,CAAC,CAAC;gCACjC,CAAC;YACR,IAAM,OAAO,GAAG,KAAK,CAAC,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;YAClD,IAAI,OAAO,KAAK,SAAS,EAAE;gBACjB,IAAA,KAAgB,IAAI,CAAC,KAAK,EAAxB,QAAM,YAAA,EAAE,GAAC,OAAe,CAAC;gBACjC,gBAAU,CAAC,OAAO,CAAC,CAAC,CAAC,OAAO,EAAE,UAAA,CAAC;oBAC3B,KAAK,IAAI,CAAC,GAAG,QAAM,CAAC,CAAC,CAAC,EAAE,EAAE,GAAG,QAAM,CAAC,CAAC,GAAG,CAAC,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE;wBACrD,IAAI,CAAC,SAAS,IAAI,gBAAU,CAAC,GAAG,CAAC,CAAC,CAAC,OAAO,EAAE,GAAC,CAAC,CAAC,CAAC,CAAC,EAAE;4BAC/C,IAAI,KAAK,CAAC,cAAQ,CAAC,WAAW,CAAC,OAAO,GAAG,YAAU,GAAG,CAAC,CAAC,CAAC;gCAAE,OAAO,GAAG,IAAI,CAAC;yBAC7E;qBACJ;gBACL,CAAC,CAAC,CAAC;aACN;;QAXL,KAAgB,UAAa,EAAb,KAAA,IAAI,CAAC,QAAQ,EAAb,cAAa,EAAb,IAAa;YAAxB,IAAM,CAAC,SAAA;oBAAD,CAAC;SAYX;KACJ;IACD,OAAO,OAAO,CAAC;AACnB,CAAC;AAvCD,sCAuCC;AAED,EAAE;AAEF,SAAgB,gBAAgB,CAAC,SAAoB,EAAE,SAAoB,EAAE,EAAU;IAC3E,IAAA,QAAQ,GAAc,SAAS,SAAvB,EAAE,OAAO,GAAK,SAAS,QAAd,CAAe;IACxC,IAAI,EAAE,KAAK,QAAQ,EAAE;QACT,IAAA,MAAM,GAAK,SAAS,OAAd,CAAe;QAC7B,IAAM,CAAC,GAAG,SAAS,CAAC,cAAc,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;QAClD,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;QAC1C,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;QAC1C,OAAO,gBAAI,CAAC,IAAI,CAAC,MAAM,EAAE;YACrB,gBAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,MAAM,EAAE,EAAE,EAAE,CAAC,CAAC,MAAM,CAAC;YACzD,gBAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,MAAM,EAAE,EAAE,EAAE,CAAC,CAAC,MAAM,CAAC;SAC5D,CAAC,CAAC;KACN;IACD,OAAO,gBAAS,CAAC;AACrB,CAAC;AAbD,4CAaC;AAED,SAAgB,aAAa,CAAC,IAAU,EAAE,SAAoB,EAAE,KAAsC,EAAE,SAAkB;IACtH,IAAI,OAAO,GAAG,KAAK,CAAC;IACpB,IAAI,gBAAI,CAAC,MAAM,CAAC,IAAI,CAAC,EAAE;QACnB,IAAI,CAAC,qBAAS,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC;YAAE,OAAO,KAAK,CAAC;QACtE,KAAgB,UAAU,EAAV,KAAA,IAAI,CAAC,KAAK,EAAV,cAAU,EAAV,IAAU,EAAE;YAAvB,IAAM,CAAC,SAAA;YACR,IAAM,GAAG,GAAG,SAAS,CAAC,cAAc,CAAC,wBAAwB,CAAC,CAAC,CAAC,CAAC;YACjE,IAAI,GAAG,KAAK,CAAC,CAAC,EAAE;gBACZ,IAAI,KAAK,CAAC,cAAQ,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC;oBAAE,OAAO,GAAG,IAAI,CAAC;aACxD;SACJ;KACJ;SAAM,IAAI,4BAAgB,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,EAAE;QACvC,IAAI,CAAC,qBAAS,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC;YAAE,OAAO,KAAK,CAAC;QACtE,IAAI,SAAS,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;YAAE,OAAO,KAAK,CAAC,CAAC,qBAAqB;QAEhF,IAAM,KAAG,GAAG,IAAI,GAAG,EAAkD,CAAC;QACtE,KAAgB,UAAa,EAAb,KAAA,IAAI,CAAC,QAAQ,EAAb,cAAa,EAAb,IAAa;YAAxB,IAAM,CAAC,SAAA;YAAmB,KAAG,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,EAAE,CAAC,CAAC,OAAO,CAAC,CAAC;SAAA;gCAElD,CAAC;YACA,IAAA,IAAI,GAAK,CAAC,KAAN,CAAO;YACnB,IAAI,CAAC,gBAAI,CAAC,QAAQ,CAAC,IAAI,CAAC;kCAAW;YACnC,SAAS,CAAC,cAAc,CAAC,iBAAiB,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,OAAO,CAAC,UAAA,CAAC;gBACzD,IAAM,gBAAgB,GAAG,KAAG,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;gBAC1C,IAAI,CAAC,SAAS,IAAI,gBAAgB,EAAE;oBAChC,gBAAU,CAAC,OAAO,CAAC,CAAC,CAAC,OAAO,EAAE,UAAA,CAAC;wBAC3B,IAAI,CAAC,CAAC,CAAC,gBAAgB,CAAC,QAAQ,CAAC,CAAC,CAAC;4BAAE,OAAO;wBAC5C,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,UAAA,EAAE;4BACpB,IAAI,CAAC,SAAS,IAAI,CAAC,gBAAgB,IAAI,gBAAU,CAAC,GAAG,CAAC,gBAAgB,EAAE,EAAE,CAAC,MAAM,CAAC,CAAC,EAAE;gCACjF,IAAM,GAAG,GAAG,SAAS,CAAC,cAAc,CAAC,YAAY,CAAC,CAAC,EAAE,IAAI,CAAC,EAAE,EAAE,EAAE,CAAC,MAAM,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC;gCAClF,IAAI,KAAK,CAAC,cAAQ,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC;oCAAE,OAAO,GAAG,IAAI,CAAC;6BACxD;wBACL,CAAC,CAAC,CAAC;oBACP,CAAC,CAAC,CAAC;iBACN;YACL,CAAC,CAAC,CAAC;;QAhBP,KAAgB,UAAa,EAAb,KAAA,IAAI,CAAC,QAAQ,EAAb,cAAa,EAAb,IAAa;YAAxB,IAAM,CAAC,SAAA;oBAAD,CAAC;SAiBX;KACJ;IACD,OAAO,OAAO,CAAC;AACnB,CAAC;AArCD,sCAqCC"}
+{"version":3,"file":"bond.js","sourceRoot":"","sources":["../../../../../../src/mol-repr/structure/visual/util/bond.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAEH,qEAAuE;AACvE,6DAA0F;AAC1F,0EAA8E;AAC9E,gFAA8E;AAC9E,+BAA4D;AAC5D,kEAA+D;AAE/D,mDAA6D;AAC7D,gDAA6E;AAC7E,mCAA2D;AAE9C,QAAA,UAAU,GAAG;IACtB,YAAY,EAAE,kCAAE,CAAC,WAAW,CAAC,IAAA,yBAAU,EAAC,gBAAQ,CAAC,KAAK,CAAC,EAAE,kCAAE,CAAC,eAAe,CAAC,gBAAQ,CAAC,KAAK,CAAC,CAAC;IAC5F,YAAY,EAAE,kCAAE,CAAC,WAAW,CAAC,EAAsB,EAAE,kCAAE,CAAC,eAAe,CAAC,gBAAQ,CAAC,KAAK,CAAC,CAAC;IACxF,eAAe,EAAE,kCAAE,CAAC,OAAO,CAAC,KAAK,CAAC;IAClC,aAAa,EAAE,kCAAE,CAAC,OAAO,CAAC,KAAK,EAAE,EAAE,WAAW,EAAE,oCAAoC,EAAE,CAAC;IACvF,aAAa,EAAE,kCAAE,CAAC,MAAM,CAAC,WAAW,EAAE,kCAAE,CAAC,cAAc,CAAC,CAAC,KAAK,EAAE,WAAW,EAAE,QAAQ,CAAU,CAAC,CAAC;CACpG,CAAC;AACW,QAAA,gBAAgB,GAAG,kCAAE,CAAC,gBAAgB,CAAC,kBAAU,CAAC,CAAC;AAGnD,QAAA,kBAAkB,yEACxB,yBAAkB,GAClB,kBAAU,KACb,oBAAoB,EAAE,kCAAE,CAAC,OAAO,CAAC,IAAI,EAAE,EAAE,WAAW,EAAE,mDAAmD,EAAE,CAAC,IAC9G;AACW,QAAA,wBAAwB,GAAG,kCAAE,CAAC,gBAAgB,CAAC,0BAAkB,CAAC,CAAC;AAGnE,QAAA,cAAc,mDACpB,qBAAc,GACd,kBAAU,EACf;AACW,QAAA,oBAAoB,GAAG,kCAAE,CAAC,gBAAgB,CAAC,sBAAc,CAAC,CAAC;AAGxE,SAAgB,cAAc,CAAC,OAAsB,EAAE,OAAsB,EAAE,CAAgB;IAC3F,OAAO,CAAC,gBAAQ,CAAC,EAAE,CAAC,OAAO,EAAE,CAAC,CAAC,IAAI,gBAAQ,CAAC,EAAE,CAAC,OAAO,EAAE,CAAC,CAAC,CAAC;AAC/D,CAAC;AAFD,wCAEC;AAED,SAAgB,uBAAuB,CAAC,SAAoB,EAAE,IAAiB,EAAE,KAAgB;IAC7F,IAAM,QAAQ,GAAG,IAAI,CAAC,QAAQ,CAAC;IACvB,IAAA,YAAY,GAAK,IAAI,CAAC,KAAK,CAAC,eAAe,CAAC,OAAO,CAAC,IAAI,aAA5C,CAA6C;IACjE,IAAM,KAAK,GAAG,IAAI,CAAC,KAAK,CAAC;IACjB,IAAA,CAAC,GAAmB,KAAK,EAAxB,EAAE,CAAC,GAAgB,KAAK,EAArB,EAAE,SAAS,GAAK,KAAK,UAAV,CAAW;IAC1B,IAAO,MAAM,GAAK,SAAS,MAAd,CAAe;IAE5B,IAAA,eAAe,GAAiC,KAAK,gBAAtC,EAAE,YAAY,GAAmB,KAAK,aAAxB,EAAE,YAAY,GAAK,KAAK,aAAV,CAAW;IAE9D,IAAM,OAAO,GAAG,gBAAQ,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC;IACjD,IAAM,OAAO,GAAG,gBAAQ,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC;IACjD,IAAM,YAAY,GAAG,gBAAQ,CAAC,KAAK,CAAC,OAAO,CAAC,IAAI,iBAAuB,OAAO,CAAC;IAEvE,IAAA,KAAK,GAAK,SAAS,MAAd,CAAe;IAC5B,IAAM,SAAS,GAAG,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAC9C,IAAI,KAAK,IAAI,CAAC,SAAS;QAAE,MAAM,IAAI,KAAK,CAAC,6CAA6C,CAAC,CAAC;IAExF,IAAI,YAAY,IAAI,CAAC,eAAe,IAAI,CAAC,KAAK;QAAE,OAAO;IAEvD,OAAO,UAAC,SAAiB;QACrB,OAAO,CACH,CAAC,CAAC,CAAC,SAAS,IAAI,CAAC,iBAAW,CAAC,GAAG,CAAC,SAAS,CAAC,QAAQ,EAAE,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;YAC7E,CAAC,eAAe,IAAI,CAAC,IAAA,YAAG,EAAC,YAAY,EAAE,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,IAAI,IAAA,YAAG,EAAC,YAAY,EAAE,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC;YAC7G,CAAC,CAAC,YAAY,IAAI,cAAc,CAAC,OAAO,EAAE,OAAO,EAAE,MAAM,CAAC,SAAS,CAAC,CAAC,CAAC,CACzE,CAAC;IACN,CAAC,CAAC;AACN,CAAC;AA1BD,0DA0BC;AAED,SAAgB,uBAAuB,CAAC,SAAoB,EAAE,KAAgB;IAC1E,IAAM,KAAK,GAAG,SAAS,CAAC,cAAc,CAAC;IAC/B,IAAA,KAAK,GAAK,KAAK,MAAV,CAAW;IAEhB,IAAA,eAAe,GAAiC,KAAK,gBAAtC,EAAE,YAAY,GAAmB,KAAK,aAAxB,EAAE,YAAY,GAAK,KAAK,aAAV,CAAW;IAE9D,IAAM,OAAO,GAAG,gBAAQ,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC;IACjD,IAAM,OAAO,GAAG,gBAAQ,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC;IACjD,IAAM,YAAY,GAAG,gBAAQ,CAAC,KAAK,CAAC,OAAO,CAAC,IAAI,iBAAuB,OAAO,CAAC;IAEvE,IAAA,KAAK,GAAK,SAAS,MAAd,CAAe;IAE5B,IAAI,YAAY,IAAI,CAAC,eAAe,IAAI,CAAC,KAAK;QAAE,OAAO;IAEvD,OAAO,UAAC,SAAiB;QACrB,IAAI,KAAK,EAAE;YACP,IAAM,CAAC,GAAG,KAAK,CAAC,SAAS,CAAC,CAAC;YAC3B,IAAM,UAAU,GAAG,KAAK,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAC9C,IAAI,CAAC,UAAU;gBAAE,OAAO,IAAI,CAAC;YAE7B,IAAM,KAAK,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAC7C,IAAM,EAAE,GAAG,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC;YACpC,IAAI,CAAC,iBAAW,CAAC,GAAG,CAAC,UAAU,CAAC,QAAQ,EAAE,EAAE,CAAC;gBAAE,OAAO,IAAI,CAAC;SAC9D;QAED,IAAI,eAAe,EAAE;YACjB,IAAM,CAAC,GAAG,KAAK,CAAC,SAAS,CAAC,CAAC;YAC3B,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAC1C,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;YAC1C,IAAI,IAAA,mBAAU,EAAC,EAAE,EAAE,EAAE,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,IAAI,IAAA,mBAAU,EAAC,EAAE,EAAE,EAAE,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC;gBAAE,OAAO,IAAI,CAAC;SACnG;QAED,IAAI,CAAC,YAAY,EAAE;YACf,IAAI,cAAc,CAAC,OAAO,EAAE,OAAO,EAAE,KAAK,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC;gBAAE,OAAO,IAAI,CAAC;SAClF;QAED,OAAO,KAAK,CAAC;IACjB,CAAC,CAAC;AACN,CAAC;AAtCD,0DAsCC;AAED,IAAiB,YAAY,CAgC5B;AAhCD,WAAiB,YAAY;IACzB,SAAgB,SAAS,CAAC,cAA8B;QAC5C,IAAA,KAAK,GAAgB,cAAc,MAA9B,EAAE,SAAS,GAAK,cAAc,UAAnB,CAAoB;QAC5C,IAAM,IAAI,GAAG,KAAK,CAAC,KAAK,CAAC,CAAC,CAAgB,CAAC;QAC3C,IAAM,UAAU,GAAG,gBAAI,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,SAAS,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;QACtE,IAAM,aAAa,GAAG,KAAK,CAAC,KAAK,CAAC,MAAM,CAAC;QACzC,IAAM,QAAQ,GAAG,gBAAI,CAAC,QAAQ,CAAC,SAAS,EAAE,SAAS,EAAE,SAAS,EAAE,SAAS,EAAE,SAAS,EAAE,SAAS,CAAC,CAAC;QACjG,IAAM,WAAW,GAAG,UAAC,UAAkB,EAAE,aAAqB;YAC1D,IAAM,IAAI,GAAG,KAAK,CAAC,KAAK,CAAC,aAAa,CAAgB,CAAC;YACvD,QAAQ,CAAC,KAAK,GAAG,IAAI,CAAC;YACtB,QAAQ,CAAC,KAAK,GAAG,IAAI,CAAC;YACtB,QAAQ,CAAC,MAAM,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC;YAC3C,QAAQ,CAAC,MAAM,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC;YAC3C,OAAO,QAAQ,CAAC;QACpB,CAAC,CAAC;QACF,OAAO,IAAA,oCAAgB,EAAC,UAAU,EAAE,aAAa,EAAE,CAAC,EAAE,WAAW,CAAC,CAAC;IACvE,CAAC;IAfe,sBAAS,YAexB,CAAA;IAED,SAAgB,aAAa,CAAC,SAAoB;QAC9C,IAAM,UAAU,GAAG,SAAS,CAAC,cAAc,CAAC,SAAS,CAAC;QACtD,IAAM,aAAa,GAAG,CAAC,CAAC;QACxB,IAAM,QAAQ,GAAG,gBAAI,CAAC,QAAQ,CAAC,SAAS,EAAE,SAAS,EAAE,SAAS,EAAE,SAAS,EAAE,SAAS,EAAE,SAAS,CAAC,CAAC;QACjG,IAAM,WAAW,GAAG,UAAC,UAAkB;YACnC,IAAM,IAAI,GAAG,SAAS,CAAC,cAAc,CAAC,KAAK,CAAC,UAAU,CAAC,CAAC;YACxD,QAAQ,CAAC,KAAK,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;YACnD,QAAQ,CAAC,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC;YAC9B,QAAQ,CAAC,KAAK,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;YACnD,QAAQ,CAAC,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC;YAC9B,OAAO,QAAQ,CAAC;QACpB,CAAC,CAAC;QACF,OAAO,IAAA,oCAAgB,EAAC,UAAU,EAAE,aAAa,EAAE,CAAC,EAAE,WAAW,EAAE,IAAI,CAAC,CAAC;IAC7E,CAAC;IAbe,0BAAa,gBAa5B,CAAA;AACL,CAAC,EAhCgB,YAAY,GAAZ,oBAAY,KAAZ,oBAAY,QAgC5B;AAED,EAAE;AAEF,SAAgB,gBAAgB,CAAC,SAAoB,EAAE,cAA8B,EAAE,EAAU;IACrF,IAAA,QAAQ,GAA0B,SAAS,SAAnC,EAAE,UAAU,GAAc,SAAS,WAAvB,EAAE,OAAO,GAAK,SAAS,QAAd,CAAe;IACpD,IAAI,EAAE,KAAK,QAAQ,EAAE;QACT,IAAA,SAAS,GAAY,cAAc,UAA1B,EAAE,KAAK,GAAK,cAAc,MAAnB,CAAoB;QAC5C,IAAM,IAAI,GAAG,KAAK,CAAC,KAAK,CAAC,UAAU,CAAC,CAAC;QACrC,IAAI,gBAAI,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE;YACb,IAAA,MAAM,GAAK,SAAS,OAAd,CAAe;YAC7B,IAAM,EAAE,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;YACjC,IAAM,EAAE,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;YACjC,OAAO,gBAAI,CAAC,IAAI,CAAC,MAAM,EAAE;gBACrB,gBAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,IAAI,EAAE,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,EAAE,CAAC;gBACjD,gBAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,IAAI,EAAE,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,EAAE,CAAC;aACpD,CAAC,CAAC;SACN;KACJ;IACD,OAAO,gBAAS,CAAC;AACrB,CAAC;AAhBD,4CAgBC;AAED,SAAgB,aAAa,CAAC,IAAU,EAAE,cAA8B,EAAE,KAAsC,EAAE,SAAkB;IAChI,IAAI,OAAO,GAAG,KAAK,CAAC;IACpB,IAAI,gBAAI,CAAC,MAAM,CAAC,IAAI,CAAC,EAAE;QACX,IAAA,SAAS,GAAY,cAAc,UAA1B,EAAE,KAAK,GAAK,cAAc,MAAnB,CAAoB;QAC5C,IAAI,CAAC,qBAAS,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC;YAAE,OAAO,KAAK,CAAC;QACtE,IAAM,IAAI,GAAG,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;QAC5B,IAAI,CAAC,gBAAI,CAAC,QAAQ,CAAC,IAAI,CAAC;YAAE,OAAO,KAAK,CAAC;QACvC,IAAM,UAAU,GAAG,IAAI,CAAC,KAAK,CAAC,SAAS,GAAG,CAAC,CAAC;QAC5C,KAAgB,UAAU,EAAV,KAAA,IAAI,CAAC,KAAK,EAAV,cAAU,EAAV,IAAU,EAAE;YAAvB,IAAM,CAAC,SAAA;YACR,IAAI,CAAC,CAAC,KAAK,KAAK,CAAC,CAAC,KAAK;gBAAE,SAAS;YAClC,IAAM,OAAO,GAAG,KAAK,CAAC,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;YACnD,IAAI,OAAO,KAAK,SAAS,EAAE;gBACvB,IAAM,GAAG,GAAG,IAAI,CAAC,KAAK,CAAC,oBAAoB,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,MAAM,CAAC,CAAC;gBAChE,IAAI,GAAG,KAAK,CAAC,CAAC,EAAE;oBACZ,IAAI,KAAK,CAAC,cAAQ,CAAC,WAAW,CAAC,OAAO,GAAG,UAAU,GAAG,GAAG,CAAC,CAAC;wBAAE,OAAO,GAAG,IAAI,CAAC;iBAC/E;aACJ;SACJ;KACJ;SAAM,IAAI,4BAAgB,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,EAAE;QAC/B,IAAA,SAAS,GAAY,cAAc,UAA1B,EAAE,KAAK,GAAK,cAAc,MAAnB,CAAoB;QAC5C,IAAI,CAAC,qBAAS,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC;YAAE,OAAO,KAAK,CAAC;QACtE,IAAM,IAAI,GAAG,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;QAC5B,IAAI,CAAC,gBAAI,CAAC,QAAQ,CAAC,IAAI,CAAC;YAAE,OAAO,KAAK,CAAC;QACvC,IAAM,YAAU,GAAG,IAAI,CAAC,KAAK,CAAC,SAAS,GAAG,CAAC,CAAC;gCACjC,CAAC;YACR,IAAM,OAAO,GAAG,KAAK,CAAC,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;YAClD,IAAI,OAAO,KAAK,SAAS,EAAE;gBACjB,IAAA,KAAgB,IAAI,CAAC,KAAK,EAAxB,QAAM,YAAA,EAAE,GAAC,OAAe,CAAC;gBACjC,gBAAU,CAAC,OAAO,CAAC,CAAC,CAAC,OAAO,EAAE,UAAA,CAAC;oBAC3B,KAAK,IAAI,CAAC,GAAG,QAAM,CAAC,CAAC,CAAC,EAAE,EAAE,GAAG,QAAM,CAAC,CAAC,GAAG,CAAC,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,CAAC,EAAE,EAAE;wBACrD,IAAI,CAAC,SAAS,IAAI,gBAAU,CAAC,GAAG,CAAC,CAAC,CAAC,OAAO,EAAE,GAAC,CAAC,CAAC,CAAC,CAAC,EAAE;4BAC/C,IAAI,KAAK,CAAC,cAAQ,CAAC,WAAW,CAAC,OAAO,GAAG,YAAU,GAAG,CAAC,CAAC,CAAC;gCAAE,OAAO,GAAG,IAAI,CAAC;yBAC7E;qBACJ;gBACL,CAAC,CAAC,CAAC;aACN;;QAXL,KAAgB,UAAa,EAAb,KAAA,IAAI,CAAC,QAAQ,EAAb,cAAa,EAAb,IAAa;YAAxB,IAAM,CAAC,SAAA;oBAAD,CAAC;SAYX;KACJ;IACD,OAAO,OAAO,CAAC;AACnB,CAAC;AAvCD,sCAuCC;AAED,EAAE;AAEF,SAAgB,gBAAgB,CAAC,SAAoB,EAAE,SAAoB,EAAE,EAAU;IAC3E,IAAA,QAAQ,GAAc,SAAS,SAAvB,EAAE,OAAO,GAAK,SAAS,QAAd,CAAe;IACxC,IAAI,EAAE,KAAK,QAAQ,EAAE;QACT,IAAA,MAAM,GAAK,SAAS,OAAd,CAAe;QAC7B,IAAM,CAAC,GAAG,SAAS,CAAC,cAAc,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;QAClD,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;QAC1C,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;QAC1C,OAAO,gBAAI,CAAC,IAAI,CAAC,MAAM,EAAE;YACrB,gBAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,MAAM,EAAE,EAAE,EAAE,CAAC,CAAC,MAAM,CAAC;YACzD,gBAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,MAAM,EAAE,EAAE,EAAE,CAAC,CAAC,MAAM,CAAC;SAC5D,CAAC,CAAC;KACN;IACD,OAAO,gBAAS,CAAC;AACrB,CAAC;AAbD,4CAaC;AAED,SAAgB,aAAa,CAAC,IAAU,EAAE,SAAoB,EAAE,KAAsC,EAAE,SAAkB;IACtH,IAAI,OAAO,GAAG,KAAK,CAAC;IACpB,IAAI,gBAAI,CAAC,MAAM,CAAC,IAAI,CAAC,EAAE;QACnB,IAAI,CAAC,qBAAS,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC;YAAE,OAAO,KAAK,CAAC;QACtE,KAAgB,UAAU,EAAV,KAAA,IAAI,CAAC,KAAK,EAAV,cAAU,EAAV,IAAU,EAAE;YAAvB,IAAM,CAAC,SAAA;YACR,IAAM,GAAG,GAAG,SAAS,CAAC,cAAc,CAAC,wBAAwB,CAAC,CAAC,CAAC,CAAC;YACjE,IAAI,GAAG,KAAK,CAAC,CAAC,EAAE;gBACZ,IAAI,KAAK,CAAC,cAAQ,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC;oBAAE,OAAO,GAAG,IAAI,CAAC;aACxD;SACJ;KACJ;SAAM,IAAI,4BAAgB,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,CAAC,EAAE;QACvC,IAAI,CAAC,qBAAS,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC;YAAE,OAAO,KAAK,CAAC;QACtE,IAAI,SAAS,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;YAAE,OAAO,KAAK,CAAC,CAAC,qBAAqB;QAEhF,IAAM,KAAG,GAAG,IAAI,GAAG,EAAkD,CAAC;QACtE,KAAgB,UAAa,EAAb,KAAA,IAAI,CAAC,QAAQ,EAAb,cAAa,EAAb,IAAa;YAAxB,IAAM,CAAC,SAAA;YAAmB,KAAG,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,EAAE,CAAC,CAAC,OAAO,CAAC,CAAC;SAAA;gCAElD,CAAC;YACA,IAAA,IAAI,GAAK,CAAC,KAAN,CAAO;YACnB,IAAI,CAAC,gBAAI,CAAC,QAAQ,CAAC,IAAI,CAAC;kCAAW;YACnC,SAAS,CAAC,cAAc,CAAC,iBAAiB,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,OAAO,CAAC,UAAA,CAAC;gBACzD,IAAM,gBAAgB,GAAG,KAAG,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;gBAC1C,IAAI,CAAC,SAAS,IAAI,gBAAgB,EAAE;oBAChC,gBAAU,CAAC,OAAO,CAAC,CAAC,CAAC,OAAO,EAAE,UAAA,CAAC;wBAC3B,IAAI,CAAC,CAAC,CAAC,gBAAgB,CAAC,QAAQ,CAAC,CAAC,CAAC;4BAAE,OAAO;wBAC5C,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,UAAA,EAAE;4BACpB,IAAI,CAAC,SAAS,IAAI,CAAC,gBAAgB,IAAI,gBAAU,CAAC,GAAG,CAAC,gBAAgB,EAAE,EAAE,CAAC,MAAM,CAAC,CAAC,EAAE;gCACjF,IAAM,GAAG,GAAG,SAAS,CAAC,cAAc,CAAC,YAAY,CAAC,CAAC,EAAE,IAAI,CAAC,EAAE,EAAE,EAAE,CAAC,MAAM,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC;gCAClF,IAAI,KAAK,CAAC,cAAQ,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC;oCAAE,OAAO,GAAG,IAAI,CAAC;6BACxD;wBACL,CAAC,CAAC,CAAC;oBACP,CAAC,CAAC,CAAC;iBACN;YACL,CAAC,CAAC,CAAC;;QAhBP,KAAgB,UAAa,EAAb,KAAA,IAAI,CAAC,QAAQ,EAAb,cAAa,EAAb,IAAa;YAAxB,IAAM,CAAC,SAAA;oBAAD,CAAC;SAiBX;KACJ;IACD,OAAO,OAAO,CAAC;AACnB,CAAC;AArCD,sCAqCC"}

package/lib/commonjs/mol-repr/structure/visual/util/color.d.ts

@@ -10,10 +10,10 @@ import { Texture } from '../../../../mol-gl/webgl/texture';
 import { Theme } from '../../../../mol-theme/theme';
 import { ParamDefinition as PD } from '../../../../mol-util/param-definition';
 export declare const ColorSmoothingParams: {
-    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
+    smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
         resolutionFactor: number;
         sampleStride: number;
-    }>, "on">>;
+    }>, "on"> | PD.NamedParams<PD.Normalize<unknown>, "off">>;
 };
 export declare type ColorSmoothingParams = typeof ColorSmoothingParams;
 export declare function getColorSmoothingProps(props: PD.Values<ColorSmoothingParams>, theme: Theme, resolution?: number): {

package/lib/commonjs/mol-repr/structure/visual/util/element.d.ts

@@ -29,13 +29,13 @@ export declare type ElementSphereImpostorProps = {
 } & ElementProps;
 export declare function createElementSphereImpostor(ctx: VisualContext, unit: Unit, structure: Structure, theme: Theme, props: ElementSphereImpostorProps, spheres?: Spheres): Spheres;
 export declare function eachElement(loci: Loci, structureGroup: StructureGroup, apply: (interval: Interval) => boolean): boolean;
-export declare function getElementLoci(pickingId: PickingId, structureGroup: StructureGroup, id: number): {
+export declare function getElementLoci(pickingId: PickingId, structureGroup: StructureGroup, id: number): StructureElement.Loci | {
     kind: "empty-loci";
-} | StructureElement.Loci;
+};
 export declare function eachSerialElement(loci: Loci, structure: Structure, apply: (interval: Interval) => boolean): boolean;
-export declare function getSerialElementLoci(pickingId: PickingId, structure: Structure, id: number): {
+export declare function getSerialElementLoci(pickingId: PickingId, structure: Structure, id: number): StructureElement.Loci | {
     kind: "empty-loci";
-} | StructureElement.Loci;
+};
 export declare namespace ElementIterator {
     function fromGroup(structureGroup: StructureGroup): LocationIterator;
     function fromStructure(structure: Structure): LocationIterator;

package/lib/commonjs/mol-repr/structure/visual/util/link.d.ts

@@ -56,10 +56,12 @@ export declare const enum LinkStyle {
     Solid = 0,
     Dashed = 1,
     Double = 2,
-    Triple = 3,
-    Disk = 4,
-    Aromatic = 5,
-    MirroredAromatic = 6
+    OffsetDouble = 3,
+    Triple = 4,
+    OffsetTriple = 5,
+    Disk = 6,
+    Aromatic = 7,
+    MirroredAromatic = 8
 }
 /**
  * Each edge is included twice to allow for coloring/picking

package/lib/commonjs/mol-repr/structure/visual/util/link.js

@@ -95,12 +95,14 @@ function createLinkCylinderMesh(ctx, linkBuilder, props, mesh) {
             continue;
         position(va, vb, edgeIndex);
         v3sub(tmpV12, vb, va);
+        var dirFlag = v3dot(tmpV12, up) > 0;
         var linkRadius = radius(edgeIndex);
         var linkStyle = style ? style(edgeIndex) : 0 /* Solid */;
         var linkStub = stubCap && (stub ? stub(edgeIndex) : false);
-        var _a = (v3dot(tmpV12, up) > 0) ? [linkStub, linkCap] : [linkCap, linkStub], topCap = _a[0], bottomCap = _a[1];
+        var _a = dirFlag ? [linkStub, linkCap] : [linkCap, linkStub], topCap = _a[0], bottomCap = _a[1];
         builderState.currentGroup = edgeIndex;
-        var aromaticOffsetFactor = 4.5;
+        var aromaticOffsetFactor = 5.5;
+        var multipleOffsetFactor = 4;
         if (linkStyle === 0 /* Solid */) {
             cylinderProps.radiusTop = cylinderProps.radiusBottom = linkRadius;
             cylinderProps.topCap = topCap;
@@ -112,15 +114,15 @@ function createLinkCylinderMesh(ctx, linkBuilder, props, mesh) {
             cylinderProps.topCap = cylinderProps.bottomCap = dashCap;
             (0, cylinder_1.addFixedCountDashedCylinder)(builderState, va, vb, 0.5, segmentCount, cylinderProps);
         }
-        else if (linkStyle === 2 /* Double */ || linkStyle === 3 /* Triple */ || linkStyle === 5 /* Aromatic */ || linkStyle === 6 /* MirroredAromatic */) {
-            var order = linkStyle === 2 /* Double */ ? 2 :
-                linkStyle === 3 /* Triple */ ? 3 : 1.5;
+        else if (linkStyle === 2 /* Double */ || linkStyle === 3 /* OffsetDouble */ || linkStyle === 4 /* Triple */ || linkStyle === 5 /* OffsetTriple */ || linkStyle === 7 /* Aromatic */ || linkStyle === 8 /* MirroredAromatic */) {
+            var order = linkStyle === 2 /* Double */ || linkStyle === 3 /* OffsetDouble */ ? 2 :
+                linkStyle === 4 /* Triple */ || linkStyle === 5 /* OffsetTriple */ ? 3 : 1.5;
             var multiRadius = linkRadius * (linkScale / (0.5 * order));
             var absOffset = (linkRadius - multiRadius) * linkSpacing;
             calculateShiftDir(vShift, va, vb, referencePosition ? referencePosition(edgeIndex) : null);
             cylinderProps.topCap = topCap;
             cylinderProps.bottomCap = bottomCap;
-            if (linkStyle === 5 /* Aromatic */ || linkStyle === 6 /* MirroredAromatic */) {
+            if (linkStyle === 7 /* Aromatic */ || linkStyle === 8 /* MirroredAromatic */) {
                 cylinderProps.radiusTop = cylinderProps.radiusBottom = linkRadius;
                 (0, cylinder_1.addCylinder)(builderState, va, vb, 0.5, cylinderProps);
                 cylinderProps.radiusTop = cylinderProps.radiusBottom = linkRadius * linkScale;
@@ -129,13 +131,34 @@ function createLinkCylinderMesh(ctx, linkBuilder, props, mesh) {
                 v3sub(va, va, vShift);
                 v3sub(vb, vb, vShift);
                 (0, cylinder_1.addFixedCountDashedCylinder)(builderState, va, vb, 0.5, 3, cylinderProps);
-                if (linkStyle === 6 /* MirroredAromatic */) {
+                if (linkStyle === 8 /* MirroredAromatic */) {
                     v3setMagnitude(vShift, vShift, absOffset * aromaticOffsetFactor * 2);
                     v3add(va, va, vShift);
                     v3add(vb, vb, vShift);
                     (0, cylinder_1.addFixedCountDashedCylinder)(builderState, va, vb, 0.5, 3, cylinderProps);
                 }
             }
+            else if (linkStyle === 3 /* OffsetDouble */ || linkStyle === 5 /* OffsetTriple */) {
+                v3setMagnitude(vShift, vShift, absOffset);
+                cylinderProps.radiusTop = cylinderProps.radiusBottom = linkRadius;
+                (0, cylinder_1.addCylinder)(builderState, va, vb, 0.5, cylinderProps);
+                v3scale(tmpV12, tmpV12, linkSpacing * linkScale * 0.2);
+                v3add(va, va, tmpV12);
+                v3sub(vb, vb, tmpV12);
+                cylinderProps.radiusTop = cylinderProps.radiusBottom = multiRadius;
+                cylinderProps.topCap = dirFlag ? linkStub : dashCap;
+                cylinderProps.bottomCap = dirFlag ? dashCap : linkStub;
+                v3setMagnitude(vShift, vShift, absOffset * multipleOffsetFactor);
+                v3sub(va, va, vShift);
+                v3sub(vb, vb, vShift);
+                (0, cylinder_1.addCylinder)(builderState, va, vb, 0.5, cylinderProps);
+                if (order === 3) {
+                    v3setMagnitude(vShift, vShift, absOffset * multipleOffsetFactor * 2);
+                    v3add(va, va, vShift);
+                    v3add(vb, vb, vShift);
+                    (0, cylinder_1.addCylinder)(builderState, va, vb, 0.5, cylinderProps);
+                }
+            }
             else {
                 v3setMagnitude(vShift, vShift, absOffset);
                 cylinderProps.radiusTop = cylinderProps.radiusBottom = multiRadius;
@@ -144,7 +167,7 @@ function createLinkCylinderMesh(ctx, linkBuilder, props, mesh) {
                 (0, cylinder_1.addDoubleCylinder)(builderState, va, vb, 0.5, vShift, cylinderProps);
             }
         }
-        else if (linkStyle === 4 /* Disk */) {
+        else if (linkStyle === 6 /* Disk */) {
             v3scale(tmpV12, tmpV12, 0.475);
             v3add(va, va, tmpV12);
             v3sub(vb, vb, tmpV12);
@@ -177,7 +200,8 @@ function createLinkCylinderImpostors(ctx, linkBuilder, props, cylinders) {
     var lengthScale = 0.5 - (0.5 / 2 / segmentCount);
     var aromaticSegmentCount = 3;
     var aromaticLengthScale = 0.5 - (0.5 / 2 / aromaticSegmentCount);
-    var aromaticOffsetFactor = 4.5;
+    var aromaticOffsetFactor = 5.5;
+    var multipleOffsetFactor = 4;
     for (var edgeIndex = 0, _eI = linkCount; edgeIndex < _eI; ++edgeIndex) {
         if (ignore && ignore(edgeIndex))
             continue;
@@ -194,14 +218,14 @@ function createLinkCylinderImpostors(ctx, linkBuilder, props, cylinders) {
             v3sub(vb, vb, tmpV12);
             builder.addFixedCountDashes(va, vb, segmentCount, dashScale, dashCap, dashCap, edgeIndex);
         }
-        else if (linkStyle === 2 /* Double */ || linkStyle === 3 /* Triple */ || linkStyle === 5 /* Aromatic */ || linkStyle === 6 /* MirroredAromatic */) {
-            var order = linkStyle === 2 /* Double */ ? 2 :
-                linkStyle === 3 /* Triple */ ? 3 : 1.5;
+        else if (linkStyle === 2 /* Double */ || linkStyle === 3 /* OffsetDouble */ || linkStyle === 4 /* Triple */ || linkStyle === 5 /* OffsetTriple */ || linkStyle === 7 /* Aromatic */ || linkStyle === 8 /* MirroredAromatic */) {
+            var order = linkStyle === 2 /* Double */ || linkStyle === 3 /* OffsetDouble */ ? 2 :
+                linkStyle === 4 /* Triple */ || linkStyle === 5 /* OffsetTriple */ ? 3 : 1.5;
             var multiScale = linkScale / (0.5 * order);
             var absOffset = (linkRadius - multiScale * linkRadius) * linkSpacing;
             v3scale(vm, v3add(vm, va, vb), 0.5);
             calculateShiftDir(vShift, va, vb, referencePosition ? referencePosition(edgeIndex) : null);
-            if (linkStyle === 5 /* Aromatic */ || linkStyle === 6 /* MirroredAromatic */) {
+            if (linkStyle === 7 /* Aromatic */ || linkStyle === 8 /* MirroredAromatic */) {
                 builder.add(va[0], va[1], va[2], vm[0], vm[1], vm[2], 1, linkCap, linkStub, edgeIndex);
                 v3scale(tmpV12, v3sub(tmpV12, vb, va), aromaticLengthScale);
                 v3sub(vb, vb, tmpV12);
@@ -209,22 +233,31 @@ function createLinkCylinderImpostors(ctx, linkBuilder, props, cylinders) {
                 v3sub(va, va, vShift);
                 v3sub(vb, vb, vShift);
                 builder.addFixedCountDashes(va, vb, aromaticSegmentCount, linkScale, dashCap, dashCap, edgeIndex);
-                if (linkStyle === 6 /* MirroredAromatic */) {
+                if (linkStyle === 8 /* MirroredAromatic */) {
                     v3setMagnitude(vShift, vShift, absOffset * aromaticOffsetFactor * 2);
                     v3add(va, va, vShift);
                     v3add(vb, vb, vShift);
                     builder.addFixedCountDashes(va, vb, aromaticSegmentCount, linkScale, dashCap, dashCap, edgeIndex);
                 }
             }
+            else if (linkStyle === 3 /* OffsetDouble */ || linkStyle === 5 /* OffsetTriple */) {
+                v3setMagnitude(vShift, vShift, absOffset * multipleOffsetFactor);
+                builder.add(va[0], va[1], va[2], vm[0], vm[1], vm[2], 1, linkCap, linkStub, edgeIndex);
+                v3scale(tmpV12, v3sub(tmpV12, va, vb), linkSpacing * linkScale * 0.2);
+                v3sub(va, va, tmpV12);
+                if (order === 3)
+                    builder.add(va[0] + vShift[0], va[1] + vShift[1], va[2] + vShift[2], vm[0] + vShift[0], vm[1] + vShift[1], vm[2] + vShift[2], multiScale, linkCap, linkStub, edgeIndex);
+                builder.add(va[0] - vShift[0], va[1] - vShift[1], va[2] - vShift[2], vm[0] - vShift[0], vm[1] - vShift[1], vm[2] - vShift[2], multiScale, dashCap, linkStub, edgeIndex);
+            }
             else {
                 v3setMagnitude(vShift, vShift, absOffset);
                 if (order === 3)
-                    builder.add(va[0], va[1], va[2], vm[0], vm[1], vm[2], multiScale, linkCap, false, edgeIndex);
+                    builder.add(va[0], va[1], va[2], vm[0], vm[1], vm[2], multiScale, linkCap, linkStub, edgeIndex);
                 builder.add(va[0] + vShift[0], va[1] + vShift[1], va[2] + vShift[2], vm[0] + vShift[0], vm[1] + vShift[1], vm[2] + vShift[2], multiScale, linkCap, linkStub, edgeIndex);
                 builder.add(va[0] - vShift[0], va[1] - vShift[1], va[2] - vShift[2], vm[0] - vShift[0], vm[1] - vShift[1], vm[2] - vShift[2], multiScale, linkCap, linkStub, edgeIndex);
             }
         }
-        else if (linkStyle === 4 /* Disk */) {
+        else if (linkStyle === 6 /* Disk */) {
             v3scale(tmpV12, v3sub(tmpV12, vb, va), 0.475);
             v3add(va, va, tmpV12);
             v3sub(vb, vb, tmpV12);
@@ -255,6 +288,7 @@ function createLinkLines(ctx, linkBuilder, props, lines) {
     var aromaticSegmentCount = 3;
     var aromaticLengthScale = 0.5 - (0.5 / 2 / aromaticSegmentCount);
     var aromaticOffsetFactor = 4.5;
+    var multipleOffsetFactor = 3;
     for (var edgeIndex = 0, _eI = linkCount; edgeIndex < _eI; ++edgeIndex) {
         if (ignore && ignore(edgeIndex))
             continue;
@@ -269,14 +303,14 @@ function createLinkLines(ctx, linkBuilder, props, lines) {
             v3sub(vb, vb, tmpV12);
             builder.addFixedCountDashes(va, vb, segmentCount, edgeIndex);
         }
-        else if (linkStyle === 2 /* Double */ || linkStyle === 3 /* Triple */ || linkStyle === 5 /* Aromatic */ || linkStyle === 6 /* MirroredAromatic */) {
-            var order = linkStyle === 2 /* Double */ ? 2 :
-                linkStyle === 3 /* Triple */ ? 3 : 1.5;
+        else if (linkStyle === 2 /* Double */ || linkStyle === 3 /* OffsetDouble */ || linkStyle === 4 /* Triple */ || linkStyle === 5 /* OffsetTriple */ || linkStyle === 7 /* Aromatic */ || linkStyle === 8 /* MirroredAromatic */) {
+            var order = linkStyle === 2 /* Double */ || linkStyle === 3 /* OffsetDouble */ ? 2 :
+                linkStyle === 4 /* Triple */ || linkStyle === 5 /* OffsetTriple */ ? 3 : 1.5;
             var multiRadius = 1 * (linkScale / (0.5 * order));
             var absOffset = (1 - multiRadius) * linkSpacing;
             v3scale(vm, v3add(vm, va, vb), 0.5);
             calculateShiftDir(vShift, va, vb, referencePosition ? referencePosition(edgeIndex) : null);
-            if (linkStyle === 5 /* Aromatic */ || linkStyle === 6 /* MirroredAromatic */) {
+            if (linkStyle === 7 /* Aromatic */ || linkStyle === 8 /* MirroredAromatic */) {
                 builder.add(va[0], va[1], va[2], vm[0], vm[1], vm[2], edgeIndex);
                 v3scale(tmpV12, v3sub(tmpV12, vb, va), aromaticLengthScale);
                 v3sub(vb, vb, tmpV12);
@@ -284,22 +318,31 @@ function createLinkLines(ctx, linkBuilder, props, lines) {
                 v3sub(va, va, vShift);
                 v3sub(vb, vb, vShift);
                 builder.addFixedCountDashes(va, vb, aromaticSegmentCount, edgeIndex);
-                if (linkStyle === 6 /* MirroredAromatic */) {
+                if (linkStyle === 8 /* MirroredAromatic */) {
                     v3setMagnitude(vShift, vShift, absOffset * aromaticOffsetFactor * 2);
                     v3add(va, va, vShift);
                     v3add(vb, vb, vShift);
                     builder.addFixedCountDashes(va, vb, aromaticSegmentCount, edgeIndex);
                 }
             }
+            else if (linkStyle === 3 /* OffsetDouble */ || linkStyle === 5 /* OffsetTriple */) {
+                v3setMagnitude(vShift, vShift, absOffset * multipleOffsetFactor);
+                builder.add(va[0], va[1], va[2], vm[0], vm[1], vm[2], edgeIndex);
+                v3scale(tmpV12, v3sub(tmpV12, va, vb), linkSpacing * linkScale);
+                v3sub(va, va, tmpV12);
+                if (order === 3)
+                    builder.add(va[0] + vShift[0], va[1] + vShift[1], va[2] + vShift[2], vm[0] + vShift[0], vm[1] + vShift[1], vm[2] + vShift[2], edgeIndex);
+                builder.add(va[0] - vShift[0], va[1] - vShift[1], va[2] - vShift[2], vm[0] - vShift[0], vm[1] - vShift[1], vm[2] - vShift[2], edgeIndex);
+            }
             else {
-                v3setMagnitude(vShift, vShift, absOffset);
+                v3setMagnitude(vShift, vShift, absOffset * 1.5);
                 if (order === 3)
                     builder.add(va[0], va[1], va[2], vm[0], vm[1], vm[2], edgeIndex);
                 builder.add(va[0] + vShift[0], va[1] + vShift[1], va[2] + vShift[2], vm[0] + vShift[0], vm[1] + vShift[1], vm[2] + vShift[2], edgeIndex);
                 builder.add(va[0] - vShift[0], va[1] - vShift[1], va[2] - vShift[2], vm[0] - vShift[0], vm[1] - vShift[1], vm[2] - vShift[2], edgeIndex);
             }
         }
-        else if (linkStyle === 4 /* Disk */) {
+        else if (linkStyle === 6 /* Disk */) {
             v3scale(tmpV12, v3sub(tmpV12, vb, va), 0.475);
             v3add(va, va, tmpV12);
             v3sub(vb, vb, tmpV12);