cognitive-core 0.2.0 → 0.2.2

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Files changed (397) hide show
  1. package/.claude/settings.json +111 -2
  2. package/.sessionlog/settings.json +4 -0
  3. package/dist/atlas.d.ts +10 -0
  4. package/dist/atlas.d.ts.map +1 -1
  5. package/dist/atlas.js +65 -0
  6. package/dist/atlas.js.map +1 -1
  7. package/dist/index.d.ts +1 -1
  8. package/dist/index.d.ts.map +1 -1
  9. package/dist/index.js +5 -1
  10. package/dist/index.js.map +1 -1
  11. package/dist/learning/index.d.ts +1 -1
  12. package/dist/learning/index.d.ts.map +1 -1
  13. package/dist/learning/index.js.map +1 -1
  14. package/dist/learning/pipeline.d.ts +4 -31
  15. package/dist/learning/pipeline.d.ts.map +1 -1
  16. package/dist/learning/pipeline.js +12 -64
  17. package/dist/learning/pipeline.js.map +1 -1
  18. package/dist/learning/unified-pipeline.d.ts +30 -0
  19. package/dist/learning/unified-pipeline.d.ts.map +1 -1
  20. package/dist/learning/unified-pipeline.js +207 -0
  21. package/dist/learning/unified-pipeline.js.map +1 -1
  22. package/dist/memory/candidate-retrieval.d.ts.map +1 -1
  23. package/dist/memory/candidate-retrieval.js +3 -1
  24. package/dist/memory/candidate-retrieval.js.map +1 -1
  25. package/dist/memory/curated-loader.d.ts +21 -4
  26. package/dist/memory/curated-loader.d.ts.map +1 -1
  27. package/dist/memory/curated-loader.js +53 -16
  28. package/dist/memory/curated-loader.js.map +1 -1
  29. package/dist/memory/index.d.ts +2 -1
  30. package/dist/memory/index.d.ts.map +1 -1
  31. package/dist/memory/index.js +3 -1
  32. package/dist/memory/index.js.map +1 -1
  33. package/dist/memory/playbook.d.ts +6 -0
  34. package/dist/memory/playbook.d.ts.map +1 -1
  35. package/dist/memory/playbook.js +15 -0
  36. package/dist/memory/playbook.js.map +1 -1
  37. package/dist/memory/source-resolver.d.ts +120 -0
  38. package/dist/memory/source-resolver.d.ts.map +1 -0
  39. package/dist/memory/source-resolver.js +300 -0
  40. package/dist/memory/source-resolver.js.map +1 -0
  41. package/dist/types/config.d.ts +141 -0
  42. package/dist/types/config.d.ts.map +1 -1
  43. package/dist/types/config.js +40 -0
  44. package/dist/types/config.js.map +1 -1
  45. package/dist/types/index.d.ts +1 -1
  46. package/dist/types/index.d.ts.map +1 -1
  47. package/dist/types/index.js +1 -1
  48. package/dist/types/index.js.map +1 -1
  49. package/dist/utils/error-classifier.js +8 -8
  50. package/dist/utils/error-classifier.js.map +1 -1
  51. package/dist/workspace/efficacy-toolkit.d.ts +164 -0
  52. package/dist/workspace/efficacy-toolkit.d.ts.map +1 -0
  53. package/dist/workspace/efficacy-toolkit.js +281 -0
  54. package/dist/workspace/efficacy-toolkit.js.map +1 -0
  55. package/dist/workspace/index.d.ts +2 -1
  56. package/dist/workspace/index.d.ts.map +1 -1
  57. package/dist/workspace/index.js +3 -1
  58. package/dist/workspace/index.js.map +1 -1
  59. package/dist/workspace/templates/index.d.ts +3 -0
  60. package/dist/workspace/templates/index.d.ts.map +1 -1
  61. package/dist/workspace/templates/index.js +6 -0
  62. package/dist/workspace/templates/index.js.map +1 -1
  63. package/dist/workspace/templates/playbook-decay-detection.d.ts +46 -0
  64. package/dist/workspace/templates/playbook-decay-detection.d.ts.map +1 -0
  65. package/dist/workspace/templates/playbook-decay-detection.js +197 -0
  66. package/dist/workspace/templates/playbook-decay-detection.js.map +1 -0
  67. package/dist/workspace/templates/playbook-efficacy-audit.d.ts +46 -0
  68. package/dist/workspace/templates/playbook-efficacy-audit.d.ts.map +1 -0
  69. package/dist/workspace/templates/playbook-efficacy-audit.js +160 -0
  70. package/dist/workspace/templates/playbook-efficacy-audit.js.map +1 -0
  71. package/dist/workspace/templates/playbook-lifecycle-review.d.ts +51 -0
  72. package/dist/workspace/templates/playbook-lifecycle-review.d.ts.map +1 -0
  73. package/dist/workspace/templates/playbook-lifecycle-review.js +187 -0
  74. package/dist/workspace/templates/playbook-lifecycle-review.js.map +1 -0
  75. package/dist/workspace/types.d.ts +12 -54
  76. package/dist/workspace/types.d.ts.map +1 -1
  77. package/dist/workspace/types.js.map +1 -1
  78. package/package.json +8 -2
  79. package/playbooks/compound-engineering/adversarial-review.json +51 -0
  80. package/playbooks/compound-engineering/agent-native-architecture.json +59 -0
  81. package/playbooks/compound-engineering/agent-native-review.json +54 -0
  82. package/playbooks/compound-engineering/api-contract-review.json +52 -0
  83. package/playbooks/compound-engineering/brainstorm-requirements.json +55 -0
  84. package/playbooks/compound-engineering/bug-reproduction.json +62 -0
  85. package/playbooks/compound-engineering/confidence-calibration.json +49 -0
  86. package/playbooks/compound-engineering/correctness-review.json +49 -0
  87. package/playbooks/compound-engineering/data-migration-safety.json +59 -0
  88. package/playbooks/compound-engineering/deployment-verification.json +63 -0
  89. package/playbooks/compound-engineering/error-recovery-patterns.json +53 -0
  90. package/playbooks/compound-engineering/implementation-planning.json +64 -0
  91. package/playbooks/compound-engineering/issue-pattern-analysis.json +53 -0
  92. package/playbooks/compound-engineering/knowledge-compounding.json +63 -0
  93. package/playbooks/compound-engineering/learnings-research.json +54 -0
  94. package/playbooks/compound-engineering/maintainability-review.json +49 -0
  95. package/playbooks/compound-engineering/performance-review.json +54 -0
  96. package/playbooks/compound-engineering/plan-adversarial-review.json +56 -0
  97. package/playbooks/compound-engineering/plan-feasibility-review.json +56 -0
  98. package/playbooks/compound-engineering/project-standards-review.json +52 -0
  99. package/playbooks/compound-engineering/reliability-review.json +53 -0
  100. package/playbooks/compound-engineering/review-orchestration.json +64 -0
  101. package/playbooks/compound-engineering/security-review.json +54 -0
  102. package/playbooks/compound-engineering/systematic-execution.json +64 -0
  103. package/playbooks/compound-engineering/testing-review.json +50 -0
  104. package/src/atlas.ts +96 -0
  105. package/src/index.ts +27 -0
  106. package/src/learning/index.ts +1 -0
  107. package/src/learning/unified-pipeline.ts +271 -1
  108. package/src/memory/candidate-retrieval.ts +2 -1
  109. package/src/memory/curated-loader.ts +69 -16
  110. package/src/memory/index.ts +16 -0
  111. package/src/memory/playbook.ts +19 -0
  112. package/src/memory/source-resolver.ts +422 -0
  113. package/src/types/config.ts +46 -0
  114. package/src/types/index.ts +4 -0
  115. package/src/utils/error-classifier.ts +8 -8
  116. package/src/workspace/efficacy-toolkit.ts +496 -0
  117. package/src/workspace/index.ts +29 -0
  118. package/src/workspace/templates/index.ts +24 -0
  119. package/src/workspace/templates/playbook-decay-detection.ts +272 -0
  120. package/src/workspace/templates/playbook-efficacy-audit.ts +246 -0
  121. package/src/workspace/templates/playbook-lifecycle-review.ts +274 -0
  122. package/src/workspace/types.ts +22 -78
  123. package/tests/fixtures/behavioral-trajectories.ts +210 -0
  124. package/tests/integration/curated-sources-e2e.test.ts +502 -0
  125. package/tests/integration/pipeline-data-correctness.test.ts +794 -0
  126. package/tests/learning/meta-learner.test.ts +418 -0
  127. package/tests/learning/pipeline-memory-updates.test.ts +721 -0
  128. package/tests/learning/unified-pipeline-efficacy.test.ts +232 -0
  129. package/tests/memory/candidate-retrieval.test.ts +167 -0
  130. package/tests/memory/compound-engineering-seed.test.ts +338 -0
  131. package/tests/memory/curated-loader-extended.test.ts +225 -0
  132. package/tests/memory/meta.test.ts +399 -0
  133. package/tests/memory/playbook-quality-validation.test.ts +430 -0
  134. package/tests/memory/source-resolver.test.ts +700 -0
  135. package/tests/search/evaluator.test.ts +257 -0
  136. package/tests/search/verification-runner.test.ts +357 -0
  137. package/tests/utils/error-classifier.test.ts +149 -0
  138. package/tests/utils/trajectory-helpers.test.ts +163 -0
  139. package/tests/workspace/efficacy-toolkit.test.ts +404 -0
  140. package/tests/workspace/templates/playbook-efficacy.test.ts +377 -0
  141. package/.claude/settings.local.json +0 -11
  142. package/dist/learning/llm-extractor.d.ts +0 -88
  143. package/dist/learning/llm-extractor.d.ts.map +0 -1
  144. package/dist/learning/llm-extractor.js +0 -372
  145. package/dist/learning/llm-extractor.js.map +0 -1
  146. package/dist/learning/loop-coordinator.d.ts +0 -61
  147. package/dist/learning/loop-coordinator.d.ts.map +0 -1
  148. package/dist/learning/loop-coordinator.js +0 -96
  149. package/dist/learning/loop-coordinator.js.map +0 -1
  150. package/references/agent-workspace/CLAUDE.md +0 -74
  151. package/references/agent-workspace/README.md +0 -587
  152. package/references/agent-workspace/media/banner.png +0 -0
  153. package/references/agent-workspace/package-lock.json +0 -2061
  154. package/references/agent-workspace/package.json +0 -54
  155. package/references/agent-workspace/src/handle.ts +0 -122
  156. package/references/agent-workspace/src/index.ts +0 -32
  157. package/references/agent-workspace/src/manager.ts +0 -102
  158. package/references/agent-workspace/src/readers/json.ts +0 -71
  159. package/references/agent-workspace/src/readers/markdown.ts +0 -37
  160. package/references/agent-workspace/src/readers/raw.ts +0 -27
  161. package/references/agent-workspace/src/types.ts +0 -68
  162. package/references/agent-workspace/src/validation.ts +0 -93
  163. package/references/agent-workspace/src/writers/json.ts +0 -17
  164. package/references/agent-workspace/src/writers/markdown.ts +0 -27
  165. package/references/agent-workspace/src/writers/raw.ts +0 -22
  166. package/references/agent-workspace/tests/errors.test.ts +0 -652
  167. package/references/agent-workspace/tests/handle.test.ts +0 -144
  168. package/references/agent-workspace/tests/manager.test.ts +0 -124
  169. package/references/agent-workspace/tests/readers.test.ts +0 -205
  170. package/references/agent-workspace/tests/validation.test.ts +0 -196
  171. package/references/agent-workspace/tests/writers.test.ts +0 -108
  172. package/references/agent-workspace/tsconfig.json +0 -20
  173. package/references/agent-workspace/tsup.config.ts +0 -9
  174. package/references/minimem/.claude/settings.json +0 -7
  175. package/references/minimem/.sudocode/issues.jsonl +0 -18
  176. package/references/minimem/.sudocode/specs.jsonl +0 -1
  177. package/references/minimem/CLAUDE.md +0 -310
  178. package/references/minimem/README.md +0 -556
  179. package/references/minimem/claude-plugin/.claude-plugin/plugin.json +0 -10
  180. package/references/minimem/claude-plugin/.mcp.json +0 -7
  181. package/references/minimem/claude-plugin/README.md +0 -158
  182. package/references/minimem/claude-plugin/commands/recall.md +0 -47
  183. package/references/minimem/claude-plugin/commands/remember.md +0 -41
  184. package/references/minimem/claude-plugin/hooks/__tests__/hooks.test.ts +0 -272
  185. package/references/minimem/claude-plugin/hooks/hooks.json +0 -27
  186. package/references/minimem/claude-plugin/hooks/session-end.sh +0 -86
  187. package/references/minimem/claude-plugin/hooks/session-start.sh +0 -85
  188. package/references/minimem/claude-plugin/skills/memory/SKILL.md +0 -108
  189. package/references/minimem/package-lock.json +0 -5373
  190. package/references/minimem/package.json +0 -60
  191. package/references/minimem/scripts/postbuild.js +0 -35
  192. package/references/minimem/src/__tests__/edge-cases.test.ts +0 -371
  193. package/references/minimem/src/__tests__/errors.test.ts +0 -265
  194. package/references/minimem/src/__tests__/helpers.ts +0 -199
  195. package/references/minimem/src/__tests__/internal.test.ts +0 -407
  196. package/references/minimem/src/__tests__/knowledge.test.ts +0 -287
  197. package/references/minimem/src/__tests__/minimem.integration.test.ts +0 -1127
  198. package/references/minimem/src/__tests__/session.test.ts +0 -190
  199. package/references/minimem/src/cli/__tests__/commands.test.ts +0 -759
  200. package/references/minimem/src/cli/commands/__tests__/conflicts.test.ts +0 -141
  201. package/references/minimem/src/cli/commands/append.ts +0 -76
  202. package/references/minimem/src/cli/commands/config.ts +0 -262
  203. package/references/minimem/src/cli/commands/conflicts.ts +0 -413
  204. package/references/minimem/src/cli/commands/daemon.ts +0 -169
  205. package/references/minimem/src/cli/commands/index.ts +0 -12
  206. package/references/minimem/src/cli/commands/init.ts +0 -88
  207. package/references/minimem/src/cli/commands/mcp.ts +0 -177
  208. package/references/minimem/src/cli/commands/push-pull.ts +0 -213
  209. package/references/minimem/src/cli/commands/search.ts +0 -158
  210. package/references/minimem/src/cli/commands/status.ts +0 -84
  211. package/references/minimem/src/cli/commands/sync-init.ts +0 -290
  212. package/references/minimem/src/cli/commands/sync.ts +0 -70
  213. package/references/minimem/src/cli/commands/upsert.ts +0 -197
  214. package/references/minimem/src/cli/config.ts +0 -584
  215. package/references/minimem/src/cli/index.ts +0 -264
  216. package/references/minimem/src/cli/shared.ts +0 -161
  217. package/references/minimem/src/cli/sync/__tests__/central.test.ts +0 -152
  218. package/references/minimem/src/cli/sync/__tests__/conflicts.test.ts +0 -209
  219. package/references/minimem/src/cli/sync/__tests__/daemon.test.ts +0 -118
  220. package/references/minimem/src/cli/sync/__tests__/detection.test.ts +0 -207
  221. package/references/minimem/src/cli/sync/__tests__/integration.test.ts +0 -476
  222. package/references/minimem/src/cli/sync/__tests__/registry.test.ts +0 -363
  223. package/references/minimem/src/cli/sync/__tests__/state.test.ts +0 -255
  224. package/references/minimem/src/cli/sync/__tests__/validation.test.ts +0 -193
  225. package/references/minimem/src/cli/sync/__tests__/watcher.test.ts +0 -178
  226. package/references/minimem/src/cli/sync/central.ts +0 -292
  227. package/references/minimem/src/cli/sync/conflicts.ts +0 -204
  228. package/references/minimem/src/cli/sync/daemon.ts +0 -407
  229. package/references/minimem/src/cli/sync/detection.ts +0 -138
  230. package/references/minimem/src/cli/sync/index.ts +0 -107
  231. package/references/minimem/src/cli/sync/operations.ts +0 -373
  232. package/references/minimem/src/cli/sync/registry.ts +0 -279
  233. package/references/minimem/src/cli/sync/state.ts +0 -355
  234. package/references/minimem/src/cli/sync/validation.ts +0 -206
  235. package/references/minimem/src/cli/sync/watcher.ts +0 -234
  236. package/references/minimem/src/cli/version.ts +0 -34
  237. package/references/minimem/src/core/index.ts +0 -9
  238. package/references/minimem/src/core/indexer.ts +0 -628
  239. package/references/minimem/src/core/searcher.ts +0 -221
  240. package/references/minimem/src/db/schema.ts +0 -183
  241. package/references/minimem/src/db/sqlite-vec.ts +0 -24
  242. package/references/minimem/src/embeddings/__tests__/embeddings.test.ts +0 -431
  243. package/references/minimem/src/embeddings/batch-gemini.ts +0 -392
  244. package/references/minimem/src/embeddings/batch-openai.ts +0 -409
  245. package/references/minimem/src/embeddings/embeddings.ts +0 -434
  246. package/references/minimem/src/index.ts +0 -109
  247. package/references/minimem/src/internal.ts +0 -299
  248. package/references/minimem/src/minimem.ts +0 -1276
  249. package/references/minimem/src/search/__tests__/hybrid.test.ts +0 -247
  250. package/references/minimem/src/search/graph.ts +0 -234
  251. package/references/minimem/src/search/hybrid.ts +0 -151
  252. package/references/minimem/src/search/search.ts +0 -256
  253. package/references/minimem/src/server/__tests__/mcp.test.ts +0 -341
  254. package/references/minimem/src/server/__tests__/tools.test.ts +0 -364
  255. package/references/minimem/src/server/mcp.ts +0 -326
  256. package/references/minimem/src/server/tools.ts +0 -720
  257. package/references/minimem/src/session.ts +0 -460
  258. package/references/minimem/tsconfig.json +0 -19
  259. package/references/minimem/tsup.config.ts +0 -26
  260. package/references/minimem/vitest.config.ts +0 -24
  261. package/references/sessionlog/.husky/pre-commit +0 -1
  262. package/references/sessionlog/.lintstagedrc.json +0 -4
  263. package/references/sessionlog/.prettierignore +0 -4
  264. package/references/sessionlog/.prettierrc.json +0 -11
  265. package/references/sessionlog/LICENSE +0 -21
  266. package/references/sessionlog/README.md +0 -453
  267. package/references/sessionlog/eslint.config.js +0 -58
  268. package/references/sessionlog/package-lock.json +0 -3672
  269. package/references/sessionlog/package.json +0 -65
  270. package/references/sessionlog/src/__tests__/agent-hooks.test.ts +0 -570
  271. package/references/sessionlog/src/__tests__/agent-registry.test.ts +0 -127
  272. package/references/sessionlog/src/__tests__/claude-code-hooks.test.ts +0 -225
  273. package/references/sessionlog/src/__tests__/claude-generator.test.ts +0 -46
  274. package/references/sessionlog/src/__tests__/commit-msg.test.ts +0 -86
  275. package/references/sessionlog/src/__tests__/cursor-agent.test.ts +0 -224
  276. package/references/sessionlog/src/__tests__/e2e-live.test.ts +0 -890
  277. package/references/sessionlog/src/__tests__/event-log.test.ts +0 -183
  278. package/references/sessionlog/src/__tests__/flush-sentinel.test.ts +0 -105
  279. package/references/sessionlog/src/__tests__/gemini-agent.test.ts +0 -375
  280. package/references/sessionlog/src/__tests__/git-hooks.test.ts +0 -78
  281. package/references/sessionlog/src/__tests__/hook-managers.test.ts +0 -121
  282. package/references/sessionlog/src/__tests__/lifecycle-tasks.test.ts +0 -759
  283. package/references/sessionlog/src/__tests__/opencode-agent.test.ts +0 -338
  284. package/references/sessionlog/src/__tests__/redaction.test.ts +0 -136
  285. package/references/sessionlog/src/__tests__/session-repo.test.ts +0 -353
  286. package/references/sessionlog/src/__tests__/session-store.test.ts +0 -166
  287. package/references/sessionlog/src/__tests__/setup-ccweb.test.ts +0 -466
  288. package/references/sessionlog/src/__tests__/skill-live.test.ts +0 -461
  289. package/references/sessionlog/src/__tests__/summarize.test.ts +0 -348
  290. package/references/sessionlog/src/__tests__/task-plan-e2e.test.ts +0 -610
  291. package/references/sessionlog/src/__tests__/task-plan-live.test.ts +0 -632
  292. package/references/sessionlog/src/__tests__/transcript-timestamp.test.ts +0 -121
  293. package/references/sessionlog/src/__tests__/types.test.ts +0 -166
  294. package/references/sessionlog/src/__tests__/utils.test.ts +0 -333
  295. package/references/sessionlog/src/__tests__/validation.test.ts +0 -103
  296. package/references/sessionlog/src/__tests__/worktree.test.ts +0 -57
  297. package/references/sessionlog/src/agent/agents/claude-code.ts +0 -1089
  298. package/references/sessionlog/src/agent/agents/cursor.ts +0 -361
  299. package/references/sessionlog/src/agent/agents/gemini-cli.ts +0 -632
  300. package/references/sessionlog/src/agent/agents/opencode.ts +0 -540
  301. package/references/sessionlog/src/agent/registry.ts +0 -143
  302. package/references/sessionlog/src/agent/session-types.ts +0 -113
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  304. package/references/sessionlog/src/cli.ts +0 -597
  305. package/references/sessionlog/src/commands/clean.ts +0 -133
  306. package/references/sessionlog/src/commands/disable.ts +0 -84
  307. package/references/sessionlog/src/commands/doctor.ts +0 -145
  308. package/references/sessionlog/src/commands/enable.ts +0 -202
  309. package/references/sessionlog/src/commands/explain.ts +0 -261
  310. package/references/sessionlog/src/commands/reset.ts +0 -105
  311. package/references/sessionlog/src/commands/resume.ts +0 -180
  312. package/references/sessionlog/src/commands/rewind.ts +0 -195
  313. package/references/sessionlog/src/commands/setup-ccweb.ts +0 -275
  314. package/references/sessionlog/src/commands/status.ts +0 -172
  315. package/references/sessionlog/src/config.ts +0 -165
  316. package/references/sessionlog/src/events/event-log.ts +0 -126
  317. package/references/sessionlog/src/git-operations.ts +0 -558
  318. package/references/sessionlog/src/hooks/git-hooks.ts +0 -165
  319. package/references/sessionlog/src/hooks/lifecycle.ts +0 -391
  320. package/references/sessionlog/src/index.ts +0 -650
  321. package/references/sessionlog/src/security/redaction.ts +0 -283
  322. package/references/sessionlog/src/session/state-machine.ts +0 -452
  323. package/references/sessionlog/src/store/checkpoint-store.ts +0 -509
  324. package/references/sessionlog/src/store/native-store.ts +0 -173
  325. package/references/sessionlog/src/store/provider-types.ts +0 -99
  326. package/references/sessionlog/src/store/session-store.ts +0 -266
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  328. package/references/sessionlog/src/strategy/common.ts +0 -207
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  330. package/references/sessionlog/src/strategy/manual-commit.ts +0 -988
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  332. package/references/sessionlog/src/summarize/claude-generator.ts +0 -115
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  334. package/references/sessionlog/src/types.ts +0 -508
  335. package/references/sessionlog/src/utils/chunk-files.ts +0 -49
  336. package/references/sessionlog/src/utils/commit-message.ts +0 -65
  337. package/references/sessionlog/src/utils/detect-agent.ts +0 -36
  338. package/references/sessionlog/src/utils/hook-managers.ts +0 -125
  339. package/references/sessionlog/src/utils/ide-tags.ts +0 -32
  340. package/references/sessionlog/src/utils/paths.ts +0 -79
  341. package/references/sessionlog/src/utils/preview-rewind.ts +0 -80
  342. package/references/sessionlog/src/utils/rewind-conflict.ts +0 -121
  343. package/references/sessionlog/src/utils/shadow-branch.ts +0 -109
  344. package/references/sessionlog/src/utils/string-utils.ts +0 -46
  345. package/references/sessionlog/src/utils/todo-extract.ts +0 -188
  346. package/references/sessionlog/src/utils/trailers.ts +0 -187
  347. package/references/sessionlog/src/utils/transcript-parse.ts +0 -177
  348. package/references/sessionlog/src/utils/transcript-timestamp.ts +0 -59
  349. package/references/sessionlog/src/utils/tree-ops.ts +0 -219
  350. package/references/sessionlog/src/utils/tty.ts +0 -72
  351. package/references/sessionlog/src/utils/validation.ts +0 -65
  352. package/references/sessionlog/src/utils/worktree.ts +0 -58
  353. package/references/sessionlog/src/wire-types.ts +0 -59
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  355. package/references/sessionlog/tsconfig.json +0 -18
  356. package/references/sessionlog/vitest.config.ts +0 -12
  357. package/references/skill-tree/.claude/settings.json +0 -6
  358. package/references/skill-tree/.sudocode/issues.jsonl +0 -19
  359. package/references/skill-tree/.sudocode/specs.jsonl +0 -3
  360. package/references/skill-tree/CLAUDE.md +0 -126
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  362. package/references/skill-tree/docs/GAPS_v1.md +0 -221
  363. package/references/skill-tree/docs/INTEGRATION_PLAN.md +0 -467
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  367. package/references/skill-tree/docs/design/multi-agent-sync.md +0 -759
  368. package/references/skill-tree/docs/scraper/BRAINSTORM.md +0 -583
  369. package/references/skill-tree/docs/scraper/POC_PLAN.md +0 -420
  370. package/references/skill-tree/docs/scraper/README.md +0 -170
  371. package/references/skill-tree/examples/basic-usage.ts +0 -164
  372. package/references/skill-tree/package-lock.json +0 -1852
  373. package/references/skill-tree/package.json +0 -66
  374. package/references/skill-tree/scraper/README.md +0 -123
  375. package/references/skill-tree/scraper/docs/DESIGN.md +0 -683
  376. package/references/skill-tree/scraper/docs/PLAN.md +0 -336
  377. package/references/skill-tree/scraper/drizzle.config.ts +0 -10
  378. package/references/skill-tree/scraper/package-lock.json +0 -6329
  379. package/references/skill-tree/scraper/package.json +0 -68
  380. package/references/skill-tree/scraper/test/fixtures/invalid-skill/missing-description.md +0 -7
  381. package/references/skill-tree/scraper/test/fixtures/invalid-skill/missing-name.md +0 -7
  382. package/references/skill-tree/scraper/test/fixtures/minimal-skill/SKILL.md +0 -27
  383. package/references/skill-tree/scraper/test/fixtures/skill-json/SKILL.json +0 -21
  384. package/references/skill-tree/scraper/test/fixtures/skill-with-meta/SKILL.md +0 -54
  385. package/references/skill-tree/scraper/test/fixtures/skill-with-meta/_meta.json +0 -24
  386. package/references/skill-tree/scraper/test/fixtures/valid-skill/SKILL.md +0 -93
  387. package/references/skill-tree/scraper/test/fixtures/valid-skill/_meta.json +0 -22
  388. package/references/skill-tree/scraper/tsup.config.ts +0 -14
  389. package/references/skill-tree/scraper/vitest.config.ts +0 -17
  390. package/references/skill-tree/scripts/convert-to-vitest.ts +0 -166
  391. package/references/skill-tree/skills/skill-writer/SKILL.md +0 -339
  392. package/references/skill-tree/skills/skill-writer/references/examples.md +0 -326
  393. package/references/skill-tree/skills/skill-writer/references/patterns.md +0 -210
  394. package/references/skill-tree/skills/skill-writer/references/quality-checklist.md +0 -123
  395. package/references/skill-tree/test/run-all.ts +0 -106
  396. package/references/skill-tree/test/utils.ts +0 -128
  397. package/references/skill-tree/vitest.config.ts +0 -16
@@ -1,392 +0,0 @@
1
- import type { GeminiEmbeddingClient } from "./embeddings.js";
2
- import { hashText } from "../internal.js";
3
-
4
- export type GeminiBatchRequest = {
5
- custom_id: string;
6
- content: { parts: Array<{ text: string }> };
7
- taskType: "RETRIEVAL_DOCUMENT" | "RETRIEVAL_QUERY";
8
- };
9
-
10
- export type GeminiBatchStatus = {
11
- name?: string;
12
- state?: string;
13
- outputConfig?: { file?: string; fileId?: string };
14
- metadata?: {
15
- output?: {
16
- responsesFile?: string;
17
- };
18
- };
19
- error?: { message?: string };
20
- };
21
-
22
- export type GeminiBatchOutputLine = {
23
- key?: string;
24
- custom_id?: string;
25
- request_id?: string;
26
- embedding?: { values?: number[] };
27
- response?: {
28
- embedding?: { values?: number[] };
29
- error?: { message?: string };
30
- };
31
- error?: { message?: string };
32
- };
33
-
34
- const GEMINI_BATCH_MAX_REQUESTS = 50000;
35
-
36
- function getGeminiBaseUrl(gemini: GeminiEmbeddingClient): string {
37
- return gemini.baseUrl?.replace(/\/$/, "") ?? "";
38
- }
39
-
40
- function getGeminiHeaders(
41
- gemini: GeminiEmbeddingClient,
42
- params: { json: boolean },
43
- ): Record<string, string> {
44
- const headers = gemini.headers ? { ...gemini.headers } : {};
45
- if (params.json) {
46
- if (!headers["Content-Type"] && !headers["content-type"]) {
47
- headers["Content-Type"] = "application/json";
48
- }
49
- } else {
50
- delete headers["Content-Type"];
51
- delete headers["content-type"];
52
- }
53
- return headers;
54
- }
55
-
56
- function getGeminiUploadUrl(baseUrl: string): string {
57
- if (baseUrl.includes("/v1beta")) {
58
- return baseUrl.replace(/\/v1beta\/?$/, "/upload/v1beta");
59
- }
60
- return `${baseUrl.replace(/\/$/, "")}/upload`;
61
- }
62
-
63
- function splitGeminiBatchRequests(requests: GeminiBatchRequest[]): GeminiBatchRequest[][] {
64
- if (requests.length <= GEMINI_BATCH_MAX_REQUESTS) return [requests];
65
- const groups: GeminiBatchRequest[][] = [];
66
- for (let i = 0; i < requests.length; i += GEMINI_BATCH_MAX_REQUESTS) {
67
- groups.push(requests.slice(i, i + GEMINI_BATCH_MAX_REQUESTS));
68
- }
69
- return groups;
70
- }
71
-
72
- function buildGeminiUploadBody(params: { jsonl: string; displayName: string }): {
73
- body: Blob;
74
- contentType: string;
75
- } {
76
- const boundary = `minimem-${hashText(params.displayName)}`;
77
- const jsonPart = JSON.stringify({
78
- file: {
79
- displayName: params.displayName,
80
- mimeType: "application/jsonl",
81
- },
82
- });
83
- const delimiter = `--${boundary}\r\n`;
84
- const closeDelimiter = `--${boundary}--\r\n`;
85
- const parts = [
86
- `${delimiter}Content-Type: application/json; charset=UTF-8\r\n\r\n${jsonPart}\r\n`,
87
- `${delimiter}Content-Type: application/jsonl; charset=UTF-8\r\n\r\n${params.jsonl}\r\n`,
88
- closeDelimiter,
89
- ];
90
- const body = new Blob([parts.join("")], { type: "multipart/related" });
91
- return {
92
- body,
93
- contentType: `multipart/related; boundary=${boundary}`,
94
- };
95
- }
96
-
97
- async function submitGeminiBatch(params: {
98
- gemini: GeminiEmbeddingClient;
99
- requests: GeminiBatchRequest[];
100
- source: string;
101
- }): Promise<GeminiBatchStatus> {
102
- const baseUrl = getGeminiBaseUrl(params.gemini);
103
- const jsonl = params.requests
104
- .map((request) =>
105
- JSON.stringify({
106
- key: request.custom_id,
107
- request: {
108
- content: request.content,
109
- task_type: request.taskType,
110
- },
111
- }),
112
- )
113
- .join("\n");
114
- const displayName = `memory-embeddings-${hashText(String(Date.now()))}`;
115
- const uploadPayload = buildGeminiUploadBody({ jsonl, displayName });
116
-
117
- const uploadUrl = `${getGeminiUploadUrl(baseUrl)}/files?uploadType=multipart`;
118
- const fileRes = await fetch(uploadUrl, {
119
- method: "POST",
120
- headers: {
121
- ...getGeminiHeaders(params.gemini, { json: false }),
122
- "Content-Type": uploadPayload.contentType,
123
- },
124
- body: uploadPayload.body,
125
- });
126
- if (!fileRes.ok) {
127
- const text = await fileRes.text();
128
- throw new Error(`gemini batch file upload failed: ${fileRes.status} ${text}`);
129
- }
130
- const filePayload = (await fileRes.json()) as { name?: string; file?: { name?: string } };
131
- const fileId = filePayload.name ?? filePayload.file?.name;
132
- if (!fileId) {
133
- throw new Error("gemini batch file upload failed: missing file id");
134
- }
135
-
136
- const batchBody = {
137
- batch: {
138
- displayName: `memory-embeddings-${params.source}`,
139
- inputConfig: {
140
- file_name: fileId,
141
- },
142
- },
143
- };
144
-
145
- const batchEndpoint = `${baseUrl}/${params.gemini.modelPath}:asyncBatchEmbedContent`;
146
- const batchRes = await fetch(batchEndpoint, {
147
- method: "POST",
148
- headers: getGeminiHeaders(params.gemini, { json: true }),
149
- body: JSON.stringify(batchBody),
150
- });
151
- if (batchRes.ok) {
152
- return (await batchRes.json()) as GeminiBatchStatus;
153
- }
154
- const text = await batchRes.text();
155
- if (batchRes.status === 404) {
156
- throw new Error(
157
- "gemini batch create failed: 404 (asyncBatchEmbedContent not available for this model/baseUrl). Disable batch.enabled or switch providers.",
158
- );
159
- }
160
- throw new Error(`gemini batch create failed: ${batchRes.status} ${text}`);
161
- }
162
-
163
- async function fetchGeminiBatchStatus(params: {
164
- gemini: GeminiEmbeddingClient;
165
- batchName: string;
166
- }): Promise<GeminiBatchStatus> {
167
- const baseUrl = getGeminiBaseUrl(params.gemini);
168
- const name = params.batchName.startsWith("batches/")
169
- ? params.batchName
170
- : `batches/${params.batchName}`;
171
- const statusUrl = `${baseUrl}/${name}`;
172
- const res = await fetch(statusUrl, {
173
- headers: getGeminiHeaders(params.gemini, { json: true }),
174
- });
175
- if (!res.ok) {
176
- const text = await res.text();
177
- throw new Error(`gemini batch status failed: ${res.status} ${text}`);
178
- }
179
- return (await res.json()) as GeminiBatchStatus;
180
- }
181
-
182
- async function fetchGeminiFileContent(params: {
183
- gemini: GeminiEmbeddingClient;
184
- fileId: string;
185
- }): Promise<string> {
186
- const baseUrl = getGeminiBaseUrl(params.gemini);
187
- const file = params.fileId.startsWith("files/") ? params.fileId : `files/${params.fileId}`;
188
- const downloadUrl = `${baseUrl}/${file}:download`;
189
- const res = await fetch(downloadUrl, {
190
- headers: getGeminiHeaders(params.gemini, { json: true }),
191
- });
192
- if (!res.ok) {
193
- const text = await res.text();
194
- throw new Error(`gemini batch file content failed: ${res.status} ${text}`);
195
- }
196
- return await res.text();
197
- }
198
-
199
- function parseGeminiBatchOutput(text: string): GeminiBatchOutputLine[] {
200
- if (!text.trim()) return [];
201
- return text
202
- .split("\n")
203
- .map((line) => line.trim())
204
- .filter(Boolean)
205
- .map((line) => JSON.parse(line) as GeminiBatchOutputLine);
206
- }
207
-
208
- async function waitForGeminiBatch(params: {
209
- gemini: GeminiEmbeddingClient;
210
- batchName: string;
211
- wait: boolean;
212
- pollIntervalMs: number;
213
- timeoutMs: number;
214
- debug?: (message: string, data?: Record<string, unknown>) => void;
215
- initial?: GeminiBatchStatus;
216
- }): Promise<{ outputFileId: string }> {
217
- const start = Date.now();
218
- let current: GeminiBatchStatus | undefined = params.initial;
219
- while (true) {
220
- const status =
221
- current ??
222
- (await fetchGeminiBatchStatus({
223
- gemini: params.gemini,
224
- batchName: params.batchName,
225
- }));
226
- const state = status.state ?? "UNKNOWN";
227
- if (["SUCCEEDED", "COMPLETED", "DONE"].includes(state)) {
228
- const outputFileId =
229
- status.outputConfig?.file ??
230
- status.outputConfig?.fileId ??
231
- status.metadata?.output?.responsesFile;
232
- if (!outputFileId) {
233
- throw new Error(`gemini batch ${params.batchName} completed without output file`);
234
- }
235
- return { outputFileId };
236
- }
237
- if (["FAILED", "CANCELLED", "CANCELED", "EXPIRED"].includes(state)) {
238
- const message = status.error?.message ?? "unknown error";
239
- throw new Error(`gemini batch ${params.batchName} ${state}: ${message}`);
240
- }
241
- if (!params.wait) {
242
- throw new Error(`gemini batch ${params.batchName} still ${state}; wait disabled`);
243
- }
244
- if (Date.now() - start > params.timeoutMs) {
245
- throw new Error(`gemini batch ${params.batchName} timed out after ${params.timeoutMs}ms`);
246
- }
247
- params.debug?.(`gemini batch ${params.batchName} ${state}; waiting ${params.pollIntervalMs}ms`);
248
- await new Promise((resolve) => setTimeout(resolve, params.pollIntervalMs));
249
- current = undefined;
250
- }
251
- }
252
-
253
- async function runWithConcurrency<T>(tasks: Array<() => Promise<T>>, limit: number): Promise<T[]> {
254
- if (tasks.length === 0) return [];
255
- const resolvedLimit = Math.max(1, Math.min(limit, tasks.length));
256
- const results: T[] = Array.from({ length: tasks.length });
257
- let next = 0;
258
- let firstError: unknown = null;
259
-
260
- const workers = Array.from({ length: resolvedLimit }, async () => {
261
- while (true) {
262
- if (firstError) return;
263
- const index = next;
264
- next += 1;
265
- if (index >= tasks.length) return;
266
- try {
267
- results[index] = await tasks[index]();
268
- } catch (err) {
269
- firstError = err;
270
- return;
271
- }
272
- }
273
- });
274
-
275
- await Promise.allSettled(workers);
276
- if (firstError) throw firstError;
277
- return results;
278
- }
279
-
280
- export async function runGeminiEmbeddingBatches(params: {
281
- gemini: GeminiEmbeddingClient;
282
- source: string;
283
- requests: GeminiBatchRequest[];
284
- wait: boolean;
285
- pollIntervalMs: number;
286
- timeoutMs: number;
287
- concurrency: number;
288
- debug?: (message: string, data?: Record<string, unknown>) => void;
289
- }): Promise<Map<string, number[]>> {
290
- if (params.requests.length === 0) return new Map();
291
- const groups = splitGeminiBatchRequests(params.requests);
292
- const byCustomId = new Map<string, number[]>();
293
-
294
- const tasks = groups.map((group, groupIndex) => async () => {
295
- const batchInfo = await submitGeminiBatch({
296
- gemini: params.gemini,
297
- requests: group,
298
- source: params.source,
299
- });
300
- const batchName = batchInfo.name ?? "";
301
- if (!batchName) {
302
- throw new Error("gemini batch create failed: missing batch name");
303
- }
304
-
305
- params.debug?.("memory embeddings: gemini batch created", {
306
- batchName,
307
- state: batchInfo.state,
308
- group: groupIndex + 1,
309
- groups: groups.length,
310
- requests: group.length,
311
- });
312
-
313
- if (
314
- !params.wait &&
315
- batchInfo.state &&
316
- !["SUCCEEDED", "COMPLETED", "DONE"].includes(batchInfo.state)
317
- ) {
318
- throw new Error(
319
- `gemini batch ${batchName} submitted; enable batch.wait to await completion`,
320
- );
321
- }
322
-
323
- const completed =
324
- batchInfo.state && ["SUCCEEDED", "COMPLETED", "DONE"].includes(batchInfo.state)
325
- ? {
326
- outputFileId:
327
- batchInfo.outputConfig?.file ??
328
- batchInfo.outputConfig?.fileId ??
329
- batchInfo.metadata?.output?.responsesFile ??
330
- "",
331
- }
332
- : await waitForGeminiBatch({
333
- gemini: params.gemini,
334
- batchName,
335
- wait: params.wait,
336
- pollIntervalMs: params.pollIntervalMs,
337
- timeoutMs: params.timeoutMs,
338
- debug: params.debug,
339
- initial: batchInfo,
340
- });
341
- if (!completed.outputFileId) {
342
- throw new Error(`gemini batch ${batchName} completed without output file`);
343
- }
344
-
345
- const content = await fetchGeminiFileContent({
346
- gemini: params.gemini,
347
- fileId: completed.outputFileId,
348
- });
349
- const outputLines = parseGeminiBatchOutput(content);
350
- const errors: string[] = [];
351
- const remaining = new Set(group.map((request) => request.custom_id));
352
-
353
- for (const line of outputLines) {
354
- const customId = line.key ?? line.custom_id ?? line.request_id;
355
- if (!customId) continue;
356
- remaining.delete(customId);
357
- if (line.error?.message) {
358
- errors.push(`${customId}: ${line.error.message}`);
359
- continue;
360
- }
361
- if (line.response?.error?.message) {
362
- errors.push(`${customId}: ${line.response.error.message}`);
363
- continue;
364
- }
365
- const embedding = line.embedding?.values ?? line.response?.embedding?.values ?? [];
366
- if (embedding.length === 0) {
367
- errors.push(`${customId}: empty embedding`);
368
- continue;
369
- }
370
- byCustomId.set(customId, embedding);
371
- }
372
-
373
- if (errors.length > 0) {
374
- throw new Error(`gemini batch ${batchName} failed: ${errors.join("; ")}`);
375
- }
376
- if (remaining.size > 0) {
377
- throw new Error(`gemini batch ${batchName} missing ${remaining.size} embedding responses`);
378
- }
379
- });
380
-
381
- params.debug?.("memory embeddings: gemini batch submit", {
382
- requests: params.requests.length,
383
- groups: groups.length,
384
- wait: params.wait,
385
- concurrency: params.concurrency,
386
- pollIntervalMs: params.pollIntervalMs,
387
- timeoutMs: params.timeoutMs,
388
- });
389
-
390
- await runWithConcurrency(tasks, params.concurrency);
391
- return byCustomId;
392
- }