cognitive-core 0.2.0 → 0.2.2

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Files changed (397) hide show
  1. package/.claude/settings.json +111 -2
  2. package/.sessionlog/settings.json +4 -0
  3. package/dist/atlas.d.ts +10 -0
  4. package/dist/atlas.d.ts.map +1 -1
  5. package/dist/atlas.js +65 -0
  6. package/dist/atlas.js.map +1 -1
  7. package/dist/index.d.ts +1 -1
  8. package/dist/index.d.ts.map +1 -1
  9. package/dist/index.js +5 -1
  10. package/dist/index.js.map +1 -1
  11. package/dist/learning/index.d.ts +1 -1
  12. package/dist/learning/index.d.ts.map +1 -1
  13. package/dist/learning/index.js.map +1 -1
  14. package/dist/learning/pipeline.d.ts +4 -31
  15. package/dist/learning/pipeline.d.ts.map +1 -1
  16. package/dist/learning/pipeline.js +12 -64
  17. package/dist/learning/pipeline.js.map +1 -1
  18. package/dist/learning/unified-pipeline.d.ts +30 -0
  19. package/dist/learning/unified-pipeline.d.ts.map +1 -1
  20. package/dist/learning/unified-pipeline.js +207 -0
  21. package/dist/learning/unified-pipeline.js.map +1 -1
  22. package/dist/memory/candidate-retrieval.d.ts.map +1 -1
  23. package/dist/memory/candidate-retrieval.js +3 -1
  24. package/dist/memory/candidate-retrieval.js.map +1 -1
  25. package/dist/memory/curated-loader.d.ts +21 -4
  26. package/dist/memory/curated-loader.d.ts.map +1 -1
  27. package/dist/memory/curated-loader.js +53 -16
  28. package/dist/memory/curated-loader.js.map +1 -1
  29. package/dist/memory/index.d.ts +2 -1
  30. package/dist/memory/index.d.ts.map +1 -1
  31. package/dist/memory/index.js +3 -1
  32. package/dist/memory/index.js.map +1 -1
  33. package/dist/memory/playbook.d.ts +6 -0
  34. package/dist/memory/playbook.d.ts.map +1 -1
  35. package/dist/memory/playbook.js +15 -0
  36. package/dist/memory/playbook.js.map +1 -1
  37. package/dist/memory/source-resolver.d.ts +120 -0
  38. package/dist/memory/source-resolver.d.ts.map +1 -0
  39. package/dist/memory/source-resolver.js +300 -0
  40. package/dist/memory/source-resolver.js.map +1 -0
  41. package/dist/types/config.d.ts +141 -0
  42. package/dist/types/config.d.ts.map +1 -1
  43. package/dist/types/config.js +40 -0
  44. package/dist/types/config.js.map +1 -1
  45. package/dist/types/index.d.ts +1 -1
  46. package/dist/types/index.d.ts.map +1 -1
  47. package/dist/types/index.js +1 -1
  48. package/dist/types/index.js.map +1 -1
  49. package/dist/utils/error-classifier.js +8 -8
  50. package/dist/utils/error-classifier.js.map +1 -1
  51. package/dist/workspace/efficacy-toolkit.d.ts +164 -0
  52. package/dist/workspace/efficacy-toolkit.d.ts.map +1 -0
  53. package/dist/workspace/efficacy-toolkit.js +281 -0
  54. package/dist/workspace/efficacy-toolkit.js.map +1 -0
  55. package/dist/workspace/index.d.ts +2 -1
  56. package/dist/workspace/index.d.ts.map +1 -1
  57. package/dist/workspace/index.js +3 -1
  58. package/dist/workspace/index.js.map +1 -1
  59. package/dist/workspace/templates/index.d.ts +3 -0
  60. package/dist/workspace/templates/index.d.ts.map +1 -1
  61. package/dist/workspace/templates/index.js +6 -0
  62. package/dist/workspace/templates/index.js.map +1 -1
  63. package/dist/workspace/templates/playbook-decay-detection.d.ts +46 -0
  64. package/dist/workspace/templates/playbook-decay-detection.d.ts.map +1 -0
  65. package/dist/workspace/templates/playbook-decay-detection.js +197 -0
  66. package/dist/workspace/templates/playbook-decay-detection.js.map +1 -0
  67. package/dist/workspace/templates/playbook-efficacy-audit.d.ts +46 -0
  68. package/dist/workspace/templates/playbook-efficacy-audit.d.ts.map +1 -0
  69. package/dist/workspace/templates/playbook-efficacy-audit.js +160 -0
  70. package/dist/workspace/templates/playbook-efficacy-audit.js.map +1 -0
  71. package/dist/workspace/templates/playbook-lifecycle-review.d.ts +51 -0
  72. package/dist/workspace/templates/playbook-lifecycle-review.d.ts.map +1 -0
  73. package/dist/workspace/templates/playbook-lifecycle-review.js +187 -0
  74. package/dist/workspace/templates/playbook-lifecycle-review.js.map +1 -0
  75. package/dist/workspace/types.d.ts +12 -54
  76. package/dist/workspace/types.d.ts.map +1 -1
  77. package/dist/workspace/types.js.map +1 -1
  78. package/package.json +8 -2
  79. package/playbooks/compound-engineering/adversarial-review.json +51 -0
  80. package/playbooks/compound-engineering/agent-native-architecture.json +59 -0
  81. package/playbooks/compound-engineering/agent-native-review.json +54 -0
  82. package/playbooks/compound-engineering/api-contract-review.json +52 -0
  83. package/playbooks/compound-engineering/brainstorm-requirements.json +55 -0
  84. package/playbooks/compound-engineering/bug-reproduction.json +62 -0
  85. package/playbooks/compound-engineering/confidence-calibration.json +49 -0
  86. package/playbooks/compound-engineering/correctness-review.json +49 -0
  87. package/playbooks/compound-engineering/data-migration-safety.json +59 -0
  88. package/playbooks/compound-engineering/deployment-verification.json +63 -0
  89. package/playbooks/compound-engineering/error-recovery-patterns.json +53 -0
  90. package/playbooks/compound-engineering/implementation-planning.json +64 -0
  91. package/playbooks/compound-engineering/issue-pattern-analysis.json +53 -0
  92. package/playbooks/compound-engineering/knowledge-compounding.json +63 -0
  93. package/playbooks/compound-engineering/learnings-research.json +54 -0
  94. package/playbooks/compound-engineering/maintainability-review.json +49 -0
  95. package/playbooks/compound-engineering/performance-review.json +54 -0
  96. package/playbooks/compound-engineering/plan-adversarial-review.json +56 -0
  97. package/playbooks/compound-engineering/plan-feasibility-review.json +56 -0
  98. package/playbooks/compound-engineering/project-standards-review.json +52 -0
  99. package/playbooks/compound-engineering/reliability-review.json +53 -0
  100. package/playbooks/compound-engineering/review-orchestration.json +64 -0
  101. package/playbooks/compound-engineering/security-review.json +54 -0
  102. package/playbooks/compound-engineering/systematic-execution.json +64 -0
  103. package/playbooks/compound-engineering/testing-review.json +50 -0
  104. package/src/atlas.ts +96 -0
  105. package/src/index.ts +27 -0
  106. package/src/learning/index.ts +1 -0
  107. package/src/learning/unified-pipeline.ts +271 -1
  108. package/src/memory/candidate-retrieval.ts +2 -1
  109. package/src/memory/curated-loader.ts +69 -16
  110. package/src/memory/index.ts +16 -0
  111. package/src/memory/playbook.ts +19 -0
  112. package/src/memory/source-resolver.ts +422 -0
  113. package/src/types/config.ts +46 -0
  114. package/src/types/index.ts +4 -0
  115. package/src/utils/error-classifier.ts +8 -8
  116. package/src/workspace/efficacy-toolkit.ts +496 -0
  117. package/src/workspace/index.ts +29 -0
  118. package/src/workspace/templates/index.ts +24 -0
  119. package/src/workspace/templates/playbook-decay-detection.ts +272 -0
  120. package/src/workspace/templates/playbook-efficacy-audit.ts +246 -0
  121. package/src/workspace/templates/playbook-lifecycle-review.ts +274 -0
  122. package/src/workspace/types.ts +22 -78
  123. package/tests/fixtures/behavioral-trajectories.ts +210 -0
  124. package/tests/integration/curated-sources-e2e.test.ts +502 -0
  125. package/tests/integration/pipeline-data-correctness.test.ts +794 -0
  126. package/tests/learning/meta-learner.test.ts +418 -0
  127. package/tests/learning/pipeline-memory-updates.test.ts +721 -0
  128. package/tests/learning/unified-pipeline-efficacy.test.ts +232 -0
  129. package/tests/memory/candidate-retrieval.test.ts +167 -0
  130. package/tests/memory/compound-engineering-seed.test.ts +338 -0
  131. package/tests/memory/curated-loader-extended.test.ts +225 -0
  132. package/tests/memory/meta.test.ts +399 -0
  133. package/tests/memory/playbook-quality-validation.test.ts +430 -0
  134. package/tests/memory/source-resolver.test.ts +700 -0
  135. package/tests/search/evaluator.test.ts +257 -0
  136. package/tests/search/verification-runner.test.ts +357 -0
  137. package/tests/utils/error-classifier.test.ts +149 -0
  138. package/tests/utils/trajectory-helpers.test.ts +163 -0
  139. package/tests/workspace/efficacy-toolkit.test.ts +404 -0
  140. package/tests/workspace/templates/playbook-efficacy.test.ts +377 -0
  141. package/.claude/settings.local.json +0 -11
  142. package/dist/learning/llm-extractor.d.ts +0 -88
  143. package/dist/learning/llm-extractor.d.ts.map +0 -1
  144. package/dist/learning/llm-extractor.js +0 -372
  145. package/dist/learning/llm-extractor.js.map +0 -1
  146. package/dist/learning/loop-coordinator.d.ts +0 -61
  147. package/dist/learning/loop-coordinator.d.ts.map +0 -1
  148. package/dist/learning/loop-coordinator.js +0 -96
  149. package/dist/learning/loop-coordinator.js.map +0 -1
  150. package/references/agent-workspace/CLAUDE.md +0 -74
  151. package/references/agent-workspace/README.md +0 -587
  152. package/references/agent-workspace/media/banner.png +0 -0
  153. package/references/agent-workspace/package-lock.json +0 -2061
  154. package/references/agent-workspace/package.json +0 -54
  155. package/references/agent-workspace/src/handle.ts +0 -122
  156. package/references/agent-workspace/src/index.ts +0 -32
  157. package/references/agent-workspace/src/manager.ts +0 -102
  158. package/references/agent-workspace/src/readers/json.ts +0 -71
  159. package/references/agent-workspace/src/readers/markdown.ts +0 -37
  160. package/references/agent-workspace/src/readers/raw.ts +0 -27
  161. package/references/agent-workspace/src/types.ts +0 -68
  162. package/references/agent-workspace/src/validation.ts +0 -93
  163. package/references/agent-workspace/src/writers/json.ts +0 -17
  164. package/references/agent-workspace/src/writers/markdown.ts +0 -27
  165. package/references/agent-workspace/src/writers/raw.ts +0 -22
  166. package/references/agent-workspace/tests/errors.test.ts +0 -652
  167. package/references/agent-workspace/tests/handle.test.ts +0 -144
  168. package/references/agent-workspace/tests/manager.test.ts +0 -124
  169. package/references/agent-workspace/tests/readers.test.ts +0 -205
  170. package/references/agent-workspace/tests/validation.test.ts +0 -196
  171. package/references/agent-workspace/tests/writers.test.ts +0 -108
  172. package/references/agent-workspace/tsconfig.json +0 -20
  173. package/references/agent-workspace/tsup.config.ts +0 -9
  174. package/references/minimem/.claude/settings.json +0 -7
  175. package/references/minimem/.sudocode/issues.jsonl +0 -18
  176. package/references/minimem/.sudocode/specs.jsonl +0 -1
  177. package/references/minimem/CLAUDE.md +0 -310
  178. package/references/minimem/README.md +0 -556
  179. package/references/minimem/claude-plugin/.claude-plugin/plugin.json +0 -10
  180. package/references/minimem/claude-plugin/.mcp.json +0 -7
  181. package/references/minimem/claude-plugin/README.md +0 -158
  182. package/references/minimem/claude-plugin/commands/recall.md +0 -47
  183. package/references/minimem/claude-plugin/commands/remember.md +0 -41
  184. package/references/minimem/claude-plugin/hooks/__tests__/hooks.test.ts +0 -272
  185. package/references/minimem/claude-plugin/hooks/hooks.json +0 -27
  186. package/references/minimem/claude-plugin/hooks/session-end.sh +0 -86
  187. package/references/minimem/claude-plugin/hooks/session-start.sh +0 -85
  188. package/references/minimem/claude-plugin/skills/memory/SKILL.md +0 -108
  189. package/references/minimem/package-lock.json +0 -5373
  190. package/references/minimem/package.json +0 -60
  191. package/references/minimem/scripts/postbuild.js +0 -35
  192. package/references/minimem/src/__tests__/edge-cases.test.ts +0 -371
  193. package/references/minimem/src/__tests__/errors.test.ts +0 -265
  194. package/references/minimem/src/__tests__/helpers.ts +0 -199
  195. package/references/minimem/src/__tests__/internal.test.ts +0 -407
  196. package/references/minimem/src/__tests__/knowledge.test.ts +0 -287
  197. package/references/minimem/src/__tests__/minimem.integration.test.ts +0 -1127
  198. package/references/minimem/src/__tests__/session.test.ts +0 -190
  199. package/references/minimem/src/cli/__tests__/commands.test.ts +0 -759
  200. package/references/minimem/src/cli/commands/__tests__/conflicts.test.ts +0 -141
  201. package/references/minimem/src/cli/commands/append.ts +0 -76
  202. package/references/minimem/src/cli/commands/config.ts +0 -262
  203. package/references/minimem/src/cli/commands/conflicts.ts +0 -413
  204. package/references/minimem/src/cli/commands/daemon.ts +0 -169
  205. package/references/minimem/src/cli/commands/index.ts +0 -12
  206. package/references/minimem/src/cli/commands/init.ts +0 -88
  207. package/references/minimem/src/cli/commands/mcp.ts +0 -177
  208. package/references/minimem/src/cli/commands/push-pull.ts +0 -213
  209. package/references/minimem/src/cli/commands/search.ts +0 -158
  210. package/references/minimem/src/cli/commands/status.ts +0 -84
  211. package/references/minimem/src/cli/commands/sync-init.ts +0 -290
  212. package/references/minimem/src/cli/commands/sync.ts +0 -70
  213. package/references/minimem/src/cli/commands/upsert.ts +0 -197
  214. package/references/minimem/src/cli/config.ts +0 -584
  215. package/references/minimem/src/cli/index.ts +0 -264
  216. package/references/minimem/src/cli/shared.ts +0 -161
  217. package/references/minimem/src/cli/sync/__tests__/central.test.ts +0 -152
  218. package/references/minimem/src/cli/sync/__tests__/conflicts.test.ts +0 -209
  219. package/references/minimem/src/cli/sync/__tests__/daemon.test.ts +0 -118
  220. package/references/minimem/src/cli/sync/__tests__/detection.test.ts +0 -207
  221. package/references/minimem/src/cli/sync/__tests__/integration.test.ts +0 -476
  222. package/references/minimem/src/cli/sync/__tests__/registry.test.ts +0 -363
  223. package/references/minimem/src/cli/sync/__tests__/state.test.ts +0 -255
  224. package/references/minimem/src/cli/sync/__tests__/validation.test.ts +0 -193
  225. package/references/minimem/src/cli/sync/__tests__/watcher.test.ts +0 -178
  226. package/references/minimem/src/cli/sync/central.ts +0 -292
  227. package/references/minimem/src/cli/sync/conflicts.ts +0 -204
  228. package/references/minimem/src/cli/sync/daemon.ts +0 -407
  229. package/references/minimem/src/cli/sync/detection.ts +0 -138
  230. package/references/minimem/src/cli/sync/index.ts +0 -107
  231. package/references/minimem/src/cli/sync/operations.ts +0 -373
  232. package/references/minimem/src/cli/sync/registry.ts +0 -279
  233. package/references/minimem/src/cli/sync/state.ts +0 -355
  234. package/references/minimem/src/cli/sync/validation.ts +0 -206
  235. package/references/minimem/src/cli/sync/watcher.ts +0 -234
  236. package/references/minimem/src/cli/version.ts +0 -34
  237. package/references/minimem/src/core/index.ts +0 -9
  238. package/references/minimem/src/core/indexer.ts +0 -628
  239. package/references/minimem/src/core/searcher.ts +0 -221
  240. package/references/minimem/src/db/schema.ts +0 -183
  241. package/references/minimem/src/db/sqlite-vec.ts +0 -24
  242. package/references/minimem/src/embeddings/__tests__/embeddings.test.ts +0 -431
  243. package/references/minimem/src/embeddings/batch-gemini.ts +0 -392
  244. package/references/minimem/src/embeddings/batch-openai.ts +0 -409
  245. package/references/minimem/src/embeddings/embeddings.ts +0 -434
  246. package/references/minimem/src/index.ts +0 -109
  247. package/references/minimem/src/internal.ts +0 -299
  248. package/references/minimem/src/minimem.ts +0 -1276
  249. package/references/minimem/src/search/__tests__/hybrid.test.ts +0 -247
  250. package/references/minimem/src/search/graph.ts +0 -234
  251. package/references/minimem/src/search/hybrid.ts +0 -151
  252. package/references/minimem/src/search/search.ts +0 -256
  253. package/references/minimem/src/server/__tests__/mcp.test.ts +0 -341
  254. package/references/minimem/src/server/__tests__/tools.test.ts +0 -364
  255. package/references/minimem/src/server/mcp.ts +0 -326
  256. package/references/minimem/src/server/tools.ts +0 -720
  257. package/references/minimem/src/session.ts +0 -460
  258. package/references/minimem/tsconfig.json +0 -19
  259. package/references/minimem/tsup.config.ts +0 -26
  260. package/references/minimem/vitest.config.ts +0 -24
  261. package/references/sessionlog/.husky/pre-commit +0 -1
  262. package/references/sessionlog/.lintstagedrc.json +0 -4
  263. package/references/sessionlog/.prettierignore +0 -4
  264. package/references/sessionlog/.prettierrc.json +0 -11
  265. package/references/sessionlog/LICENSE +0 -21
  266. package/references/sessionlog/README.md +0 -453
  267. package/references/sessionlog/eslint.config.js +0 -58
  268. package/references/sessionlog/package-lock.json +0 -3672
  269. package/references/sessionlog/package.json +0 -65
  270. package/references/sessionlog/src/__tests__/agent-hooks.test.ts +0 -570
  271. package/references/sessionlog/src/__tests__/agent-registry.test.ts +0 -127
  272. package/references/sessionlog/src/__tests__/claude-code-hooks.test.ts +0 -225
  273. package/references/sessionlog/src/__tests__/claude-generator.test.ts +0 -46
  274. package/references/sessionlog/src/__tests__/commit-msg.test.ts +0 -86
  275. package/references/sessionlog/src/__tests__/cursor-agent.test.ts +0 -224
  276. package/references/sessionlog/src/__tests__/e2e-live.test.ts +0 -890
  277. package/references/sessionlog/src/__tests__/event-log.test.ts +0 -183
  278. package/references/sessionlog/src/__tests__/flush-sentinel.test.ts +0 -105
  279. package/references/sessionlog/src/__tests__/gemini-agent.test.ts +0 -375
  280. package/references/sessionlog/src/__tests__/git-hooks.test.ts +0 -78
  281. package/references/sessionlog/src/__tests__/hook-managers.test.ts +0 -121
  282. package/references/sessionlog/src/__tests__/lifecycle-tasks.test.ts +0 -759
  283. package/references/sessionlog/src/__tests__/opencode-agent.test.ts +0 -338
  284. package/references/sessionlog/src/__tests__/redaction.test.ts +0 -136
  285. package/references/sessionlog/src/__tests__/session-repo.test.ts +0 -353
  286. package/references/sessionlog/src/__tests__/session-store.test.ts +0 -166
  287. package/references/sessionlog/src/__tests__/setup-ccweb.test.ts +0 -466
  288. package/references/sessionlog/src/__tests__/skill-live.test.ts +0 -461
  289. package/references/sessionlog/src/__tests__/summarize.test.ts +0 -348
  290. package/references/sessionlog/src/__tests__/task-plan-e2e.test.ts +0 -610
  291. package/references/sessionlog/src/__tests__/task-plan-live.test.ts +0 -632
  292. package/references/sessionlog/src/__tests__/transcript-timestamp.test.ts +0 -121
  293. package/references/sessionlog/src/__tests__/types.test.ts +0 -166
  294. package/references/sessionlog/src/__tests__/utils.test.ts +0 -333
  295. package/references/sessionlog/src/__tests__/validation.test.ts +0 -103
  296. package/references/sessionlog/src/__tests__/worktree.test.ts +0 -57
  297. package/references/sessionlog/src/agent/agents/claude-code.ts +0 -1089
  298. package/references/sessionlog/src/agent/agents/cursor.ts +0 -361
  299. package/references/sessionlog/src/agent/agents/gemini-cli.ts +0 -632
  300. package/references/sessionlog/src/agent/agents/opencode.ts +0 -540
  301. package/references/sessionlog/src/agent/registry.ts +0 -143
  302. package/references/sessionlog/src/agent/session-types.ts +0 -113
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  304. package/references/sessionlog/src/cli.ts +0 -597
  305. package/references/sessionlog/src/commands/clean.ts +0 -133
  306. package/references/sessionlog/src/commands/disable.ts +0 -84
  307. package/references/sessionlog/src/commands/doctor.ts +0 -145
  308. package/references/sessionlog/src/commands/enable.ts +0 -202
  309. package/references/sessionlog/src/commands/explain.ts +0 -261
  310. package/references/sessionlog/src/commands/reset.ts +0 -105
  311. package/references/sessionlog/src/commands/resume.ts +0 -180
  312. package/references/sessionlog/src/commands/rewind.ts +0 -195
  313. package/references/sessionlog/src/commands/setup-ccweb.ts +0 -275
  314. package/references/sessionlog/src/commands/status.ts +0 -172
  315. package/references/sessionlog/src/config.ts +0 -165
  316. package/references/sessionlog/src/events/event-log.ts +0 -126
  317. package/references/sessionlog/src/git-operations.ts +0 -558
  318. package/references/sessionlog/src/hooks/git-hooks.ts +0 -165
  319. package/references/sessionlog/src/hooks/lifecycle.ts +0 -391
  320. package/references/sessionlog/src/index.ts +0 -650
  321. package/references/sessionlog/src/security/redaction.ts +0 -283
  322. package/references/sessionlog/src/session/state-machine.ts +0 -452
  323. package/references/sessionlog/src/store/checkpoint-store.ts +0 -509
  324. package/references/sessionlog/src/store/native-store.ts +0 -173
  325. package/references/sessionlog/src/store/provider-types.ts +0 -99
  326. package/references/sessionlog/src/store/session-store.ts +0 -266
  327. package/references/sessionlog/src/strategy/attribution.ts +0 -296
  328. package/references/sessionlog/src/strategy/common.ts +0 -207
  329. package/references/sessionlog/src/strategy/content-overlap.ts +0 -228
  330. package/references/sessionlog/src/strategy/manual-commit.ts +0 -988
  331. package/references/sessionlog/src/strategy/types.ts +0 -279
  332. package/references/sessionlog/src/summarize/claude-generator.ts +0 -115
  333. package/references/sessionlog/src/summarize/summarize.ts +0 -432
  334. package/references/sessionlog/src/types.ts +0 -508
  335. package/references/sessionlog/src/utils/chunk-files.ts +0 -49
  336. package/references/sessionlog/src/utils/commit-message.ts +0 -65
  337. package/references/sessionlog/src/utils/detect-agent.ts +0 -36
  338. package/references/sessionlog/src/utils/hook-managers.ts +0 -125
  339. package/references/sessionlog/src/utils/ide-tags.ts +0 -32
  340. package/references/sessionlog/src/utils/paths.ts +0 -79
  341. package/references/sessionlog/src/utils/preview-rewind.ts +0 -80
  342. package/references/sessionlog/src/utils/rewind-conflict.ts +0 -121
  343. package/references/sessionlog/src/utils/shadow-branch.ts +0 -109
  344. package/references/sessionlog/src/utils/string-utils.ts +0 -46
  345. package/references/sessionlog/src/utils/todo-extract.ts +0 -188
  346. package/references/sessionlog/src/utils/trailers.ts +0 -187
  347. package/references/sessionlog/src/utils/transcript-parse.ts +0 -177
  348. package/references/sessionlog/src/utils/transcript-timestamp.ts +0 -59
  349. package/references/sessionlog/src/utils/tree-ops.ts +0 -219
  350. package/references/sessionlog/src/utils/tty.ts +0 -72
  351. package/references/sessionlog/src/utils/validation.ts +0 -65
  352. package/references/sessionlog/src/utils/worktree.ts +0 -58
  353. package/references/sessionlog/src/wire-types.ts +0 -59
  354. package/references/sessionlog/templates/setup-env.sh +0 -153
  355. package/references/sessionlog/tsconfig.json +0 -18
  356. package/references/sessionlog/vitest.config.ts +0 -12
  357. package/references/skill-tree/.claude/settings.json +0 -6
  358. package/references/skill-tree/.sudocode/issues.jsonl +0 -19
  359. package/references/skill-tree/.sudocode/specs.jsonl +0 -3
  360. package/references/skill-tree/CLAUDE.md +0 -126
  361. package/references/skill-tree/README.md +0 -372
  362. package/references/skill-tree/docs/GAPS_v1.md +0 -221
  363. package/references/skill-tree/docs/INTEGRATION_PLAN.md +0 -467
  364. package/references/skill-tree/docs/TODOS.md +0 -91
  365. package/references/skill-tree/docs/anthropic_skill_guide.md +0 -1364
  366. package/references/skill-tree/docs/design/federated-skill-trees.md +0 -524
  367. package/references/skill-tree/docs/design/multi-agent-sync.md +0 -759
  368. package/references/skill-tree/docs/scraper/BRAINSTORM.md +0 -583
  369. package/references/skill-tree/docs/scraper/POC_PLAN.md +0 -420
  370. package/references/skill-tree/docs/scraper/README.md +0 -170
  371. package/references/skill-tree/examples/basic-usage.ts +0 -164
  372. package/references/skill-tree/package-lock.json +0 -1852
  373. package/references/skill-tree/package.json +0 -66
  374. package/references/skill-tree/scraper/README.md +0 -123
  375. package/references/skill-tree/scraper/docs/DESIGN.md +0 -683
  376. package/references/skill-tree/scraper/docs/PLAN.md +0 -336
  377. package/references/skill-tree/scraper/drizzle.config.ts +0 -10
  378. package/references/skill-tree/scraper/package-lock.json +0 -6329
  379. package/references/skill-tree/scraper/package.json +0 -68
  380. package/references/skill-tree/scraper/test/fixtures/invalid-skill/missing-description.md +0 -7
  381. package/references/skill-tree/scraper/test/fixtures/invalid-skill/missing-name.md +0 -7
  382. package/references/skill-tree/scraper/test/fixtures/minimal-skill/SKILL.md +0 -27
  383. package/references/skill-tree/scraper/test/fixtures/skill-json/SKILL.json +0 -21
  384. package/references/skill-tree/scraper/test/fixtures/skill-with-meta/SKILL.md +0 -54
  385. package/references/skill-tree/scraper/test/fixtures/skill-with-meta/_meta.json +0 -24
  386. package/references/skill-tree/scraper/test/fixtures/valid-skill/SKILL.md +0 -93
  387. package/references/skill-tree/scraper/test/fixtures/valid-skill/_meta.json +0 -22
  388. package/references/skill-tree/scraper/tsup.config.ts +0 -14
  389. package/references/skill-tree/scraper/vitest.config.ts +0 -17
  390. package/references/skill-tree/scripts/convert-to-vitest.ts +0 -166
  391. package/references/skill-tree/skills/skill-writer/SKILL.md +0 -339
  392. package/references/skill-tree/skills/skill-writer/references/examples.md +0 -326
  393. package/references/skill-tree/skills/skill-writer/references/patterns.md +0 -210
  394. package/references/skill-tree/skills/skill-writer/references/quality-checklist.md +0 -123
  395. package/references/skill-tree/test/run-all.ts +0 -106
  396. package/references/skill-tree/test/utils.ts +0 -128
  397. package/references/skill-tree/vitest.config.ts +0 -16
@@ -0,0 +1,422 @@
1
+ /**
2
+ * Source Resolver — Normalizes playbook sources (local paths, git URLs, shorthands)
3
+ * into local directory paths for the curated loader.
4
+ *
5
+ * Supports:
6
+ * - Local filesystem paths (pass-through)
7
+ * - Git URLs: "git:https://github.com/org/repo" or "git:https://github.com/org/repo#ref"
8
+ * - GitHub shorthand: "github:org/repo" or "github:org/repo#ref"
9
+ *
10
+ * Cloned repos are cached in a configurable directory (default: .atlas/curated-cache/).
11
+ * Cache freshness is controlled by maxAgeMs. Stale caches are refreshed on next resolve.
12
+ */
13
+
14
+ import { execFile as execFileCb } from 'node:child_process';
15
+ import { existsSync, statSync, rmSync } from 'node:fs';
16
+ import { join } from 'node:path';
17
+ import { mkdir, readFile, readdir } from 'node:fs/promises';
18
+ import { promisify } from 'node:util';
19
+
20
+ const execFile = promisify(execFileCb);
21
+
22
+ // ============================================================================
23
+ // Types
24
+ // ============================================================================
25
+
26
+ /**
27
+ * Parsed git source components
28
+ */
29
+ export interface ParsedGitSource {
30
+ url: string;
31
+ ref?: string;
32
+ cacheKey: string;
33
+ }
34
+
35
+ /**
36
+ * Manifest file (cognitive-core.json) at repo root
37
+ */
38
+ export interface PlaybookManifest {
39
+ /** Relative path to playbook directory within the repo */
40
+ playbooks: string;
41
+ /** Optional version label */
42
+ version?: string;
43
+ /** Optional display name */
44
+ name?: string;
45
+ /** Optional description */
46
+ description?: string;
47
+ }
48
+
49
+ /**
50
+ * State persisted per resolved source (stored in system_state)
51
+ */
52
+ export interface SourceState {
53
+ /** Original config source string */
54
+ source: string;
55
+ /** Resolved git URL (empty for local paths) */
56
+ url: string;
57
+ /** Requested ref (branch/tag/commit) */
58
+ ref: string;
59
+ /** Actual commit SHA loaded */
60
+ commitSha: string;
61
+ /** Local cache path */
62
+ cachePath: string;
63
+ /** Discovered playbook directory within cache */
64
+ playbookDir: string;
65
+ /** ISO timestamp of last successful load */
66
+ loadedAt: string;
67
+ /** Number of playbooks loaded from this source */
68
+ playbookCount: number;
69
+ }
70
+
71
+ /**
72
+ * Result of resolving a source
73
+ */
74
+ export interface ResolveResult {
75
+ /** Local directory path containing playbook JSON files */
76
+ playbookDir: string;
77
+ /** Whether this is a git source */
78
+ isGit: boolean;
79
+ /** Commit SHA (only for git sources) */
80
+ commitSha?: string;
81
+ /** Whether the source was freshly cloned/updated */
82
+ updated: boolean;
83
+ /** Source identifier for provenance tracking */
84
+ sourceId: string;
85
+ }
86
+
87
+ /**
88
+ * Options for source resolution
89
+ */
90
+ export interface ResolveOptions {
91
+ /** Cache directory (default: .atlas/curated-cache) */
92
+ cacheDir: string;
93
+ /** Maximum cache age in milliseconds before refreshing (default: 24h) */
94
+ maxAgeMs: number;
95
+ /** Force update regardless of cache age */
96
+ forceUpdate?: boolean;
97
+ /** Callback for loading/saving source state */
98
+ getSourceState?: (source: string) => SourceState | undefined;
99
+ setSourceState?: (source: string, state: SourceState) => void;
100
+ }
101
+
102
+ // ============================================================================
103
+ // Public API
104
+ // ============================================================================
105
+
106
+ /**
107
+ * Check if a source string is a git source (not a local path).
108
+ */
109
+ export function isGitSource(source: string): boolean {
110
+ return (
111
+ source.startsWith('git:') ||
112
+ source.startsWith('github:') ||
113
+ source.startsWith('git@') ||
114
+ source.startsWith('git+')
115
+ );
116
+ }
117
+
118
+ /**
119
+ * Parse a git source string into URL and optional ref components.
120
+ *
121
+ * Supported formats:
122
+ * - "git:https://github.com/org/repo"
123
+ * - "git:https://github.com/org/repo#v1.0.0"
124
+ * - "github:org/repo"
125
+ * - "github:org/repo#branch"
126
+ */
127
+ export function parseGitSource(source: string): ParsedGitSource {
128
+ let raw = source;
129
+
130
+ // Strip prefix
131
+ if (raw.startsWith('git:')) {
132
+ raw = raw.slice(4);
133
+ } else if (raw.startsWith('git+')) {
134
+ raw = raw.slice(4);
135
+ } else if (raw.startsWith('github:')) {
136
+ const rest = raw.slice(7); // "org/repo" or "org/repo#ref"
137
+ const [path, ref] = rest.split('#', 2);
138
+ const url = `https://github.com/${path}.git`;
139
+ const cacheKey = `github.com/${path}`;
140
+ return { url, ref, cacheKey };
141
+ }
142
+
143
+ // Parse ref from fragment
144
+ const hashIdx = raw.indexOf('#');
145
+ let url: string;
146
+ let ref: string | undefined;
147
+
148
+ if (hashIdx !== -1) {
149
+ url = raw.slice(0, hashIdx);
150
+ ref = raw.slice(hashIdx + 1);
151
+ } else {
152
+ url = raw;
153
+ }
154
+
155
+ // Ensure .git suffix for HTTPS URLs
156
+ if (url.startsWith('https://') && !url.endsWith('.git')) {
157
+ url += '.git';
158
+ }
159
+
160
+ // Build cache key from URL (strip protocol + .git suffix)
161
+ const cacheKey = url
162
+ .replace(/^https?:\/\//, '')
163
+ .replace(/\.git$/, '');
164
+
165
+ return { url, ref, cacheKey };
166
+ }
167
+
168
+ /**
169
+ * Resolve a playbook source to a local directory path.
170
+ *
171
+ * For local paths, returns the path as-is (after verifying it exists).
172
+ * For git sources, clones/updates to a cache directory and discovers
173
+ * the playbook directory within the repo.
174
+ */
175
+ export async function resolvePlaybookSource(
176
+ source: string,
177
+ options: ResolveOptions,
178
+ ): Promise<ResolveResult | null> {
179
+ // Local path — pass through
180
+ if (!isGitSource(source)) {
181
+ if (!existsSync(source)) {
182
+ console.warn(`[source-resolver] Local path does not exist: ${source}`);
183
+ return null;
184
+ }
185
+ return {
186
+ playbookDir: source,
187
+ isGit: false,
188
+ updated: false,
189
+ sourceId: source,
190
+ };
191
+ }
192
+
193
+ // Git source — parse, clone/update, discover
194
+ const parsed = parseGitSource(source);
195
+ const cachePath = join(options.cacheDir, parsed.cacheKey);
196
+
197
+ try {
198
+ // Ensure cache parent dir exists
199
+ await mkdir(cachePath, { recursive: true });
200
+
201
+ const isCloned = existsSync(join(cachePath, '.git'));
202
+
203
+ if (!isCloned) {
204
+ // First-time clone
205
+ await gitClone(parsed.url, parsed.ref, cachePath);
206
+ } else if (shouldUpdate(source, options)) {
207
+ // Update existing cache
208
+ await gitUpdate(parsed.ref, cachePath);
209
+ }
210
+
211
+ // Get current commit SHA
212
+ const commitSha = await gitRevParse(cachePath);
213
+
214
+ // Check if we already loaded this exact SHA
215
+ const prevState = options.getSourceState?.(source);
216
+ if (prevState && prevState.commitSha === commitSha && !options.forceUpdate) {
217
+ return {
218
+ playbookDir: prevState.playbookDir,
219
+ isGit: true,
220
+ commitSha,
221
+ updated: false,
222
+ sourceId: source,
223
+ };
224
+ }
225
+
226
+ // Discover playbook directory
227
+ const playbookDir = await discoverPlaybookDir(cachePath);
228
+ if (!playbookDir) {
229
+ console.warn(`[source-resolver] No playbook directory found in ${source}`);
230
+ return null;
231
+ }
232
+
233
+ // Persist source state
234
+ const state: SourceState = {
235
+ source,
236
+ url: parsed.url,
237
+ ref: parsed.ref ?? '',
238
+ commitSha,
239
+ cachePath,
240
+ playbookDir,
241
+ loadedAt: new Date().toISOString(),
242
+ playbookCount: 0, // Updated by caller after loading
243
+ };
244
+ options.setSourceState?.(source, state);
245
+
246
+ return {
247
+ playbookDir,
248
+ isGit: true,
249
+ commitSha,
250
+ updated: true,
251
+ sourceId: source,
252
+ };
253
+ } catch (error) {
254
+ // If we have a cached version, use it despite the error
255
+ if (existsSync(join(cachePath, '.git'))) {
256
+ console.warn(
257
+ `[source-resolver] Failed to update ${source}, using cached version:`,
258
+ error instanceof Error ? error.message : String(error),
259
+ );
260
+ const prevState = options.getSourceState?.(source);
261
+ if (prevState) {
262
+ return {
263
+ playbookDir: prevState.playbookDir,
264
+ isGit: true,
265
+ commitSha: prevState.commitSha,
266
+ updated: false,
267
+ sourceId: source,
268
+ };
269
+ }
270
+ // Try to discover even without state
271
+ const playbookDir = await discoverPlaybookDir(cachePath);
272
+ if (playbookDir) {
273
+ return {
274
+ playbookDir,
275
+ isGit: true,
276
+ updated: false,
277
+ sourceId: source,
278
+ };
279
+ }
280
+ }
281
+
282
+ console.warn(
283
+ `[source-resolver] Failed to resolve ${source}, skipping:`,
284
+ error instanceof Error ? error.message : String(error),
285
+ );
286
+ return null;
287
+ }
288
+ }
289
+
290
+ // ============================================================================
291
+ // Git operations
292
+ // ============================================================================
293
+
294
+ async function gitClone(url: string, ref: string | undefined, dest: string): Promise<void> {
295
+ // Remove the directory first since mkdir already created it
296
+ rmSync(dest, { recursive: true, force: true });
297
+
298
+ const args = ['clone', '--depth', '1', '--single-branch'];
299
+ if (ref) {
300
+ args.push('--branch', ref);
301
+ }
302
+ args.push(url, dest);
303
+
304
+ await execFile('git', args, { timeout: 60_000 });
305
+ }
306
+
307
+ async function gitUpdate(ref: string | undefined, cachePath: string): Promise<void> {
308
+ const fetchArgs = ['fetch', 'origin'];
309
+ if (ref) {
310
+ fetchArgs.push(ref);
311
+ }
312
+ await execFile('git', fetchArgs, { cwd: cachePath, timeout: 30_000 });
313
+
314
+ // Always use FETCH_HEAD — works for branches, tags, and commits.
315
+ // Using origin/${ref} would break for tags (refs/tags/*, not refs/remotes/origin/*).
316
+ await execFile('git', ['reset', '--hard', 'FETCH_HEAD'], {
317
+ cwd: cachePath,
318
+ timeout: 10_000,
319
+ });
320
+ }
321
+
322
+ async function gitRevParse(cachePath: string): Promise<string> {
323
+ const { stdout } = await execFile('git', ['rev-parse', 'HEAD'], {
324
+ cwd: cachePath,
325
+ timeout: 5_000,
326
+ });
327
+ return stdout.trim();
328
+ }
329
+
330
+ // ============================================================================
331
+ // Playbook directory discovery
332
+ // ============================================================================
333
+
334
+ /**
335
+ * Discover the playbook directory within a cloned repo.
336
+ *
337
+ * Search order:
338
+ * 1. Manifest file (cognitive-core.json) at repo root
339
+ * 2. Convention: playbooks/ directory
340
+ * 3. Convention: curated-playbooks/ directory
341
+ * 4. Root directory if it contains .json files matching schema
342
+ */
343
+ export async function discoverPlaybookDir(repoRoot: string): Promise<string | null> {
344
+ // 1. Check for manifest
345
+ const manifestPath = join(repoRoot, 'cognitive-core.json');
346
+ if (existsSync(manifestPath)) {
347
+ try {
348
+ const content = await readFile(manifestPath, 'utf-8');
349
+ const manifest = JSON.parse(content) as PlaybookManifest;
350
+ if (manifest.playbooks) {
351
+ const dir = join(repoRoot, manifest.playbooks);
352
+ if (existsSync(dir)) {
353
+ return dir;
354
+ }
355
+ }
356
+ } catch {
357
+ // Invalid manifest, fall through to convention
358
+ }
359
+ }
360
+
361
+ // 2. Convention: playbooks/
362
+ const playbooksDir = join(repoRoot, 'playbooks');
363
+ if (existsSync(playbooksDir) && statSync(playbooksDir).isDirectory()) {
364
+ return playbooksDir;
365
+ }
366
+
367
+ // 3. Convention: curated-playbooks/
368
+ const curatedDir = join(repoRoot, 'curated-playbooks');
369
+ if (existsSync(curatedDir) && statSync(curatedDir).isDirectory()) {
370
+ return curatedDir;
371
+ }
372
+
373
+ // 4. Check if root has JSON files that look like playbooks
374
+ if (await hasPlaybookJsonFiles(repoRoot)) {
375
+ return repoRoot;
376
+ }
377
+
378
+ return null;
379
+ }
380
+
381
+ /**
382
+ * Check if a directory contains at least one JSON file that looks like a playbook.
383
+ */
384
+ async function hasPlaybookJsonFiles(dir: string): Promise<boolean> {
385
+ try {
386
+ const files = await readdir(dir);
387
+ const jsonFiles = files.filter(f => f.endsWith('.json'));
388
+ if (jsonFiles.length === 0) return false;
389
+
390
+ // Check first JSON file for required playbook fields
391
+ const content = await readFile(join(dir, jsonFiles[0]), 'utf-8');
392
+ const parsed = JSON.parse(content);
393
+ return !!(parsed.name && parsed.applicability && parsed.guidance);
394
+ } catch {
395
+ return false;
396
+ }
397
+ }
398
+
399
+ // ============================================================================
400
+ // Cache management
401
+ // ============================================================================
402
+
403
+ /**
404
+ * Determine whether a cached source should be updated.
405
+ */
406
+ function shouldUpdate(source: string, options: ResolveOptions): boolean {
407
+ if (options.forceUpdate) return true;
408
+
409
+ const state = options.getSourceState?.(source);
410
+ if (!state) return true; // No previous state, always update
411
+
412
+ const loadedAt = new Date(state.loadedAt).getTime();
413
+ const age = Date.now() - loadedAt;
414
+ return age > options.maxAgeMs;
415
+ }
416
+
417
+ /**
418
+ * Generate the system_state key for a source.
419
+ */
420
+ export function sourceStateKey(source: string): string {
421
+ return `curated-source:${source}`;
422
+ }
@@ -513,6 +513,45 @@ export const SkillTreeConfigSchema = z.object({
513
513
  dbPath: z.string().default('skills.db'),
514
514
  });
515
515
 
516
+ /**
517
+ * Curated playbook cache configuration (for git sources)
518
+ */
519
+ export const CuratedCacheConfigSchema = z.object({
520
+ /** Cache directory for cloned repos (relative to storage.baseDir, default: curated-cache) */
521
+ dir: z.string().default('curated-cache'),
522
+ /** Maximum cache age in milliseconds before refreshing (default: 24h) */
523
+ maxAgeMs: z.number().default(24 * 60 * 60 * 1000),
524
+ });
525
+
526
+ export type CuratedCacheConfig = z.infer<typeof CuratedCacheConfigSchema>;
527
+
528
+ /**
529
+ * Curated playbook configuration
530
+ */
531
+ export const CuratedPlaybooksConfigSchema = z.object({
532
+ /** Load the bundled compound-engineering seed pack on init */
533
+ loadBundledSeedPack: z.boolean().default(false),
534
+ /** Additional directories to load curated playbooks from (backward compat) */
535
+ additionalDirs: z.array(z.string()).default([]),
536
+ /**
537
+ * Playbook sources — local paths or git URIs.
538
+ *
539
+ * Supported formats:
540
+ * - Local path: "/path/to/playbooks"
541
+ * - Git URL: "git:https://github.com/org/repo" or "git:https://github.com/org/repo#v1.0.0"
542
+ * - GitHub shorthand: "github:org/repo" or "github:org/repo#branch"
543
+ *
544
+ * Git sources are cloned to a local cache and refreshed based on cache.maxAgeMs.
545
+ */
546
+ sources: z.array(z.string()).default([]),
547
+ /** Cache configuration for git-based sources */
548
+ cache: CuratedCacheConfigSchema.default({}),
549
+ /** Re-create curated playbooks on each init (useful when updating seed files) */
550
+ recreateOnInit: z.boolean().default(false),
551
+ });
552
+
553
+ export type CuratedPlaybooksConfig = z.infer<typeof CuratedPlaybooksConfigSchema>;
554
+
516
555
  export type SkillTreeConfig = z.infer<typeof SkillTreeConfigSchema>;
517
556
 
518
557
  /**
@@ -570,6 +609,8 @@ export const AtlasConfigSchema = z.object({
570
609
  knowledgeBank: KnowledgeBankConfigSchema.default({}),
571
610
  /** Skill-tree storage configuration */
572
611
  skillTree: SkillTreeConfigSchema.default({}),
612
+ /** Curated playbook seeding configuration */
613
+ curatedPlaybooks: CuratedPlaybooksConfigSchema.default({}),
573
614
  /** Session bank configuration (Entire CLI integration) */
574
615
  sessionBank: SessionBankConfigSchema.default({}),
575
616
  /** Feature toggles for ruvector-inspired subsystems */
@@ -609,6 +650,11 @@ export function mergeConfig(
609
650
  teamLearning: { ...base.teamLearning, ...overrides.teamLearning },
610
651
  knowledgeBank: { ...base.knowledgeBank, ...overrides.knowledgeBank },
611
652
  skillTree: { ...base.skillTree, ...overrides.skillTree },
653
+ curatedPlaybooks: {
654
+ ...base.curatedPlaybooks,
655
+ ...overrides.curatedPlaybooks,
656
+ cache: { ...base.curatedPlaybooks.cache, ...overrides.curatedPlaybooks?.cache },
657
+ },
612
658
  sessionBank: { ...base.sessionBank, ...overrides.sessionBank },
613
659
  features: { ...base.features, ...overrides.features },
614
660
  });
@@ -250,6 +250,8 @@ export {
250
250
  type GraphConfigType,
251
251
  type DefragConfig,
252
252
  type SkillTreeConfig,
253
+ type CuratedCacheConfig,
254
+ type CuratedPlaybooksConfig,
253
255
  type SessionBankConfig,
254
256
  type FeaturesConfig,
255
257
  type AtlasConfig,
@@ -282,6 +284,8 @@ export {
282
284
  TeamLearningConfigSchema,
283
285
  AgenticTaskRunnerConfigSchema,
284
286
  SkillTreeConfigSchema,
287
+ CuratedCacheConfigSchema,
288
+ CuratedPlaybooksConfigSchema,
285
289
  FeaturesConfigSchema,
286
290
  AtlasConfigSchema,
287
291
  createDefaultConfig,
@@ -60,26 +60,26 @@ const ERROR_RULES: Array<{ test: (s: string) => boolean; type: ErrorType; descri
60
60
  type: 'permission-error',
61
61
  description: 'Permission denied',
62
62
  },
63
- {
64
- test: (s) => /not\s*found|missing|no\s*such\s*file/i.test(s),
65
- type: 'not-found',
66
- description: 'Resource not found',
67
- },
68
63
  {
69
64
  test: (s) => /network|connection|ECONNREFUSED|ENOTFOUND/i.test(s),
70
65
  type: 'network-error',
71
66
  description: 'Network or connection error',
72
67
  },
73
68
  {
74
- test: (s) => /test.*fail|fail.*test|assertion|assert/i.test(s),
75
- type: 'test-failure',
76
- description: 'Test or assertion failure',
69
+ test: (s) => /not\s*found|missing|no\s*such\s*file/i.test(s),
70
+ type: 'not-found',
71
+ description: 'Resource not found',
77
72
  },
78
73
  {
79
74
  test: (s) => /assertion|assert/i.test(s),
80
75
  type: 'assertion-error',
81
76
  description: 'Assertion failed',
82
77
  },
78
+ {
79
+ test: (s) => /test.*fail|fail.*test/i.test(s),
80
+ type: 'test-failure',
81
+ description: 'Test or assertion failure',
82
+ },
83
83
  {
84
84
  test: (s) => /exception|error/i.test(s),
85
85
  type: 'general-error',