agentic-flow 1.9.0 → 1.9.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1223) hide show
  1. package/.claude/agents/analysis/code-analyzer.md +1 -1
  2. package/.claude/agents/core/coder.md +2 -57
  3. package/.claude/agents/core/planner.md +1 -53
  4. package/.claude/agents/core/researcher.md +6 -60
  5. package/.claude/agents/core/reviewer.md +1 -55
  6. package/.claude/agents/core/tester.md +1 -54
  7. package/.claude/agents/goal/goal-planner.md +25 -120
  8. package/.claude/agents/swarm/hierarchical-coordinator.md +4 -75
  9. package/.claude/agents/templates/coordinator-swarm-init.md +4 -19
  10. package/.claude/commands/hooks/overview.md +10 -84
  11. package/.claude/settings.json +20 -21
  12. package/.claude/settings.local.json +7 -3
  13. package/CHANGELOG.md +976 -83
  14. package/README.md +1 -15
  15. package/dist/agentdb/tests/frontier-features.test.js +665 -0
  16. package/{agentic-flow/dist → dist}/cli/config-wizard.js +13 -4
  17. package/dist/cli/federation-cli.d.ts +53 -0
  18. package/{agentic-flow/dist → dist}/cli-proxy.js +22 -15
  19. package/dist/hooks/parallel-validation.js +166 -0
  20. package/dist/hooks/swarm-learning-optimizer.js +350 -0
  21. package/{agentic-flow/dist → dist}/proxy/provider-instructions.js +98 -0
  22. package/dist/reasoningbank/config/reasoningbank-types.ts +57 -0
  23. package/{agentic-flow/dist → dist}/utils/cli.js +29 -0
  24. package/docs/.claude-flow/metrics/performance.json +3 -3
  25. package/docs/.claude-flow/metrics/task-metrics.json +3 -3
  26. package/docs/guides/MCP-TOOLS.md +850 -1050
  27. package/package.json +169 -44
  28. package/validation/docker/Dockerfile.reasoningbank-local +24 -0
  29. package/validation/docker/Dockerfile.reasoningbank-test +21 -0
  30. package/validation/docker/README.md +234 -0
  31. package/validation/docker/docker-compose.yml +29 -0
  32. package/validation/docker/test-reasoningbank-npx.mjs +442 -0
  33. package/validation/docker-e2e-validation.sh +212 -0
  34. package/validation/docker-quic-test.sh +42 -0
  35. package/validation/docker-quic-validation.sh +60 -0
  36. package/validation/quic-deep-validation.ts +304 -0
  37. package/validation/test-quic-integration.ts +243 -0
  38. package/validation/test-quic-wasm.ts +94 -0
  39. package/validation/test-regression.mjs +246 -0
  40. package/validation/test-wasm-e2e.ts +354 -0
  41. package/validation/test-wasm-integration.ts +99 -0
  42. package/wasm/quic/agentic_flow_quic.d.ts +37 -0
  43. package/wasm/quic/agentic_flow_quic_bg.wasm.d.ts +19 -0
  44. package/wasm/reasoningbank/reasoningbank_wasm.d.ts +41 -0
  45. package/wasm/reasoningbank/reasoningbank_wasm_bg.wasm.d.ts +20 -0
  46. package/.claude/agents/goal/code-goal-planner.md +0 -446
  47. package/.claude/agents/hive-mind/collective-intelligence-coordinator.md +0 -130
  48. package/.claude/agents/hive-mind/queen-coordinator.md +0 -203
  49. package/.claude/agents/hive-mind/scout-explorer.md +0 -242
  50. package/.claude/agents/hive-mind/swarm-memory-manager.md +0 -193
  51. package/.claude/agents/hive-mind/worker-specialist.md +0 -217
  52. package/.claude/agents/neural/safla-neural.md +0 -74
  53. package/.claude/agents/reasoning/README.md +0 -452
  54. package/.claude/agents/reasoning/adaptive-learner.md +0 -415
  55. package/.claude/agents/reasoning/context-synthesizer.md +0 -532
  56. package/.claude/agents/reasoning/experience-curator.md +0 -562
  57. package/.claude/agents/reasoning/goal-planner.md +0 -73
  58. package/.claude/agents/reasoning/memory-optimizer.md +0 -579
  59. package/.claude/agents/reasoning/pattern-matcher.md +0 -591
  60. package/.claude/agents/reasoning/reasoning-optimized.md +0 -587
  61. package/.claude/commands/coordination/README.md +0 -9
  62. package/.claude/commands/coordination/agent-spawn.md +0 -25
  63. package/.claude/commands/coordination/init.md +0 -44
  64. package/.claude/commands/coordination/orchestrate.md +0 -43
  65. package/.claude/commands/coordination/spawn.md +0 -45
  66. package/.claude/commands/coordination/swarm-init.md +0 -85
  67. package/.claude/commands/coordination/task-orchestrate.md +0 -25
  68. package/.claude/commands/memory/README.md +0 -9
  69. package/.claude/commands/memory/memory-persist.md +0 -25
  70. package/.claude/commands/memory/memory-search.md +0 -25
  71. package/.claude/commands/memory/memory-usage.md +0 -25
  72. package/.claude/commands/memory/neural.md +0 -47
  73. package/.claude/commands/memory/usage.md +0 -46
  74. package/.claude/skills/agentdb-advanced/SKILL.md +0 -550
  75. package/.claude/skills/agentdb-learning/SKILL.md +0 -545
  76. package/.claude/skills/agentdb-memory-patterns/SKILL.md +0 -339
  77. package/.claude/skills/agentdb-optimization/SKILL.md +0 -509
  78. package/.claude/skills/agentdb-vector-search/SKILL.md +0 -339
  79. package/.claude/skills/flow-nexus-neural/SKILL.md +0 -738
  80. package/.claude/skills/flow-nexus-platform/SKILL.md +0 -1157
  81. package/.claude/skills/flow-nexus-swarm/SKILL.md +0 -610
  82. package/.claude/skills/github-code-review/SKILL.md +0 -1140
  83. package/.claude/skills/github-multi-repo/SKILL.md +0 -874
  84. package/.claude/skills/github-project-management/SKILL.md +0 -1277
  85. package/.claude/skills/github-release-management/SKILL.md +0 -1081
  86. package/.claude/skills/github-workflow-automation/SKILL.md +0 -1065
  87. package/.claude/skills/hive-mind-advanced/SKILL.md +0 -712
  88. package/.claude/skills/hooks-automation/SKILL.md +0 -1201
  89. package/.claude/skills/pair-programming/SKILL.md +0 -1202
  90. package/.claude/skills/performance-analysis/SKILL.md +0 -563
  91. package/.claude/skills/reasoningbank-agentdb/SKILL.md +0 -446
  92. package/.claude/skills/reasoningbank-intelligence/SKILL.md +0 -201
  93. package/.claude/skills/skill-builder/SKILL.md +0 -910
  94. package/.claude/skills/sparc-methodology/SKILL.md +0 -1115
  95. package/.claude/skills/stream-chain/SKILL.md +0 -563
  96. package/.claude/skills/swarm-advanced/SKILL.md +0 -973
  97. package/.claude/skills/swarm-orchestration/SKILL.md +0 -179
  98. package/.claude/skills/verification-quality/SKILL.md +0 -649
  99. package/.claude/statusline-command.sh +0 -176
  100. package/.claude-flow/metrics/performance.json +0 -87
  101. package/.claude-flow/metrics/system-metrics.json +0 -2138
  102. package/.claude-flow/metrics/task-metrics.json +0 -10
  103. package/.hive-mind/README.md +0 -43
  104. package/.hive-mind/config/queens.json +0 -59
  105. package/.hive-mind/config/workers.json +0 -72
  106. package/.hive-mind/config.json +0 -111
  107. package/.hive-mind/hive.db +0 -0
  108. package/.mcp.json +0 -39
  109. package/.swarm/memory.db +0 -0
  110. package/.swarm/memory.db-shm +0 -0
  111. package/.swarm/memory.db-wal +0 -0
  112. package/CLAUDE.md +0 -354
  113. package/agentdb.db +0 -0
  114. package/agentic-flow/.agentdb-instructions.md +0 -66
  115. package/agentic-flow/.claude/agents/analysis/code-analyzer.md +0 -209
  116. package/agentic-flow/.claude/agents/analysis/code-review/analyze-code-quality.md +0 -180
  117. package/agentic-flow/.claude/agents/architecture/system-design/arch-system-design.md +0 -156
  118. package/agentic-flow/.claude/agents/base-template-generator.md +0 -42
  119. package/agentic-flow/.claude/agents/consensus/byzantine-coordinator.md +0 -63
  120. package/agentic-flow/.claude/agents/consensus/crdt-synchronizer.md +0 -997
  121. package/agentic-flow/.claude/agents/consensus/gossip-coordinator.md +0 -63
  122. package/agentic-flow/.claude/agents/consensus/performance-benchmarker.md +0 -851
  123. package/agentic-flow/.claude/agents/consensus/quorum-manager.md +0 -823
  124. package/agentic-flow/.claude/agents/consensus/raft-manager.md +0 -63
  125. package/agentic-flow/.claude/agents/consensus/security-manager.md +0 -622
  126. package/agentic-flow/.claude/agents/core/coder.md +0 -211
  127. package/agentic-flow/.claude/agents/core/planner.md +0 -116
  128. package/agentic-flow/.claude/agents/core/researcher.md +0 -136
  129. package/agentic-flow/.claude/agents/core/reviewer.md +0 -272
  130. package/agentic-flow/.claude/agents/core/tester.md +0 -266
  131. package/agentic-flow/.claude/agents/data/ml/data-ml-model.md +0 -193
  132. package/agentic-flow/.claude/agents/development/backend/dev-backend-api.md +0 -142
  133. package/agentic-flow/.claude/agents/devops/ci-cd/ops-cicd-github.md +0 -164
  134. package/agentic-flow/.claude/agents/documentation/api-docs/docs-api-openapi.md +0 -174
  135. package/agentic-flow/.claude/agents/flow-nexus/app-store.md +0 -88
  136. package/agentic-flow/.claude/agents/flow-nexus/authentication.md +0 -69
  137. package/agentic-flow/.claude/agents/flow-nexus/challenges.md +0 -81
  138. package/agentic-flow/.claude/agents/flow-nexus/neural-network.md +0 -88
  139. package/agentic-flow/.claude/agents/flow-nexus/payments.md +0 -83
  140. package/agentic-flow/.claude/agents/flow-nexus/sandbox.md +0 -76
  141. package/agentic-flow/.claude/agents/flow-nexus/swarm.md +0 -76
  142. package/agentic-flow/.claude/agents/flow-nexus/user-tools.md +0 -96
  143. package/agentic-flow/.claude/agents/flow-nexus/workflow.md +0 -84
  144. package/agentic-flow/.claude/agents/github/code-review-swarm.md +0 -538
  145. package/agentic-flow/.claude/agents/github/github-modes.md +0 -173
  146. package/agentic-flow/.claude/agents/github/issue-tracker.md +0 -319
  147. package/agentic-flow/.claude/agents/github/multi-repo-swarm.md +0 -553
  148. package/agentic-flow/.claude/agents/github/pr-manager.md +0 -191
  149. package/agentic-flow/.claude/agents/github/project-board-sync.md +0 -509
  150. package/agentic-flow/.claude/agents/github/release-manager.md +0 -367
  151. package/agentic-flow/.claude/agents/github/release-swarm.md +0 -583
  152. package/agentic-flow/.claude/agents/github/repo-architect.md +0 -398
  153. package/agentic-flow/.claude/agents/github/swarm-issue.md +0 -573
  154. package/agentic-flow/.claude/agents/github/swarm-pr.md +0 -428
  155. package/agentic-flow/.claude/agents/github/sync-coordinator.md +0 -452
  156. package/agentic-flow/.claude/agents/github/workflow-automation.md +0 -635
  157. package/agentic-flow/.claude/agents/goal/agent.md +0 -816
  158. package/agentic-flow/.claude/agents/goal/goal-planner.md +0 -73
  159. package/agentic-flow/.claude/agents/optimization/benchmark-suite.md +0 -665
  160. package/agentic-flow/.claude/agents/optimization/load-balancer.md +0 -431
  161. package/agentic-flow/.claude/agents/optimization/performance-monitor.md +0 -672
  162. package/agentic-flow/.claude/agents/optimization/resource-allocator.md +0 -674
  163. package/agentic-flow/.claude/agents/optimization/topology-optimizer.md +0 -808
  164. package/agentic-flow/.claude/agents/sparc/architecture.md +0 -472
  165. package/agentic-flow/.claude/agents/sparc/pseudocode.md +0 -318
  166. package/agentic-flow/.claude/agents/sparc/refinement.md +0 -525
  167. package/agentic-flow/.claude/agents/sparc/specification.md +0 -276
  168. package/agentic-flow/.claude/agents/specialized/mobile/spec-mobile-react-native.md +0 -226
  169. package/agentic-flow/.claude/agents/swarm/adaptive-coordinator.md +0 -396
  170. package/agentic-flow/.claude/agents/swarm/hierarchical-coordinator.md +0 -256
  171. package/agentic-flow/.claude/agents/swarm/mesh-coordinator.md +0 -392
  172. package/agentic-flow/.claude/agents/templates/automation-smart-agent.md +0 -205
  173. package/agentic-flow/.claude/agents/templates/coordinator-swarm-init.md +0 -90
  174. package/agentic-flow/.claude/agents/templates/github-pr-manager.md +0 -177
  175. package/agentic-flow/.claude/agents/templates/implementer-sparc-coder.md +0 -259
  176. package/agentic-flow/.claude/agents/templates/memory-coordinator.md +0 -187
  177. package/agentic-flow/.claude/agents/templates/migration-plan.md +0 -746
  178. package/agentic-flow/.claude/agents/templates/orchestrator-task.md +0 -139
  179. package/agentic-flow/.claude/agents/templates/performance-analyzer.md +0 -199
  180. package/agentic-flow/.claude/agents/templates/sparc-coordinator.md +0 -183
  181. package/agentic-flow/.claude/agents/testing/unit/tdd-london-swarm.md +0 -244
  182. package/agentic-flow/.claude/agents/testing/validation/production-validator.md +0 -395
  183. package/agentic-flow/.claude/commands/agents/README.md +0 -10
  184. package/agentic-flow/.claude/commands/agents/agent-capabilities.md +0 -21
  185. package/agentic-flow/.claude/commands/agents/agent-coordination.md +0 -28
  186. package/agentic-flow/.claude/commands/agents/agent-spawning.md +0 -28
  187. package/agentic-flow/.claude/commands/agents/agent-types.md +0 -26
  188. package/agentic-flow/.claude/commands/analysis/COMMAND_COMPLIANCE_REPORT.md +0 -54
  189. package/agentic-flow/.claude/commands/analysis/README.md +0 -9
  190. package/agentic-flow/.claude/commands/analysis/bottleneck-detect.md +0 -162
  191. package/agentic-flow/.claude/commands/analysis/performance-bottlenecks.md +0 -59
  192. package/agentic-flow/.claude/commands/analysis/performance-report.md +0 -25
  193. package/agentic-flow/.claude/commands/analysis/token-efficiency.md +0 -45
  194. package/agentic-flow/.claude/commands/analysis/token-usage.md +0 -25
  195. package/agentic-flow/.claude/commands/automation/README.md +0 -9
  196. package/agentic-flow/.claude/commands/automation/auto-agent.md +0 -122
  197. package/agentic-flow/.claude/commands/automation/self-healing.md +0 -106
  198. package/agentic-flow/.claude/commands/automation/session-memory.md +0 -90
  199. package/agentic-flow/.claude/commands/automation/smart-agents.md +0 -73
  200. package/agentic-flow/.claude/commands/automation/smart-spawn.md +0 -25
  201. package/agentic-flow/.claude/commands/automation/workflow-select.md +0 -25
  202. package/agentic-flow/.claude/commands/flow-nexus/app-store.md +0 -124
  203. package/agentic-flow/.claude/commands/flow-nexus/challenges.md +0 -120
  204. package/agentic-flow/.claude/commands/flow-nexus/login-registration.md +0 -65
  205. package/agentic-flow/.claude/commands/flow-nexus/neural-network.md +0 -134
  206. package/agentic-flow/.claude/commands/flow-nexus/payments.md +0 -116
  207. package/agentic-flow/.claude/commands/flow-nexus/sandbox.md +0 -83
  208. package/agentic-flow/.claude/commands/flow-nexus/swarm.md +0 -87
  209. package/agentic-flow/.claude/commands/flow-nexus/user-tools.md +0 -152
  210. package/agentic-flow/.claude/commands/flow-nexus/workflow.md +0 -115
  211. package/agentic-flow/.claude/commands/github/README.md +0 -11
  212. package/agentic-flow/.claude/commands/github/code-review-swarm.md +0 -514
  213. package/agentic-flow/.claude/commands/github/code-review.md +0 -25
  214. package/agentic-flow/.claude/commands/github/github-modes.md +0 -147
  215. package/agentic-flow/.claude/commands/github/github-swarm.md +0 -121
  216. package/agentic-flow/.claude/commands/github/issue-tracker.md +0 -292
  217. package/agentic-flow/.claude/commands/github/issue-triage.md +0 -25
  218. package/agentic-flow/.claude/commands/github/multi-repo-swarm.md +0 -519
  219. package/agentic-flow/.claude/commands/github/pr-enhance.md +0 -26
  220. package/agentic-flow/.claude/commands/github/pr-manager.md +0 -170
  221. package/agentic-flow/.claude/commands/github/project-board-sync.md +0 -471
  222. package/agentic-flow/.claude/commands/github/release-manager.md +0 -338
  223. package/agentic-flow/.claude/commands/github/release-swarm.md +0 -544
  224. package/agentic-flow/.claude/commands/github/repo-analyze.md +0 -25
  225. package/agentic-flow/.claude/commands/github/repo-architect.md +0 -367
  226. package/agentic-flow/.claude/commands/github/swarm-issue.md +0 -482
  227. package/agentic-flow/.claude/commands/github/swarm-pr.md +0 -285
  228. package/agentic-flow/.claude/commands/github/sync-coordinator.md +0 -301
  229. package/agentic-flow/.claude/commands/github/workflow-automation.md +0 -442
  230. package/agentic-flow/.claude/commands/hive-mind/README.md +0 -17
  231. package/agentic-flow/.claude/commands/hive-mind/hive-mind-consensus.md +0 -8
  232. package/agentic-flow/.claude/commands/hive-mind/hive-mind-init.md +0 -18
  233. package/agentic-flow/.claude/commands/hive-mind/hive-mind-memory.md +0 -8
  234. package/agentic-flow/.claude/commands/hive-mind/hive-mind-metrics.md +0 -8
  235. package/agentic-flow/.claude/commands/hive-mind/hive-mind-resume.md +0 -8
  236. package/agentic-flow/.claude/commands/hive-mind/hive-mind-sessions.md +0 -8
  237. package/agentic-flow/.claude/commands/hive-mind/hive-mind-spawn.md +0 -21
  238. package/agentic-flow/.claude/commands/hive-mind/hive-mind-status.md +0 -8
  239. package/agentic-flow/.claude/commands/hive-mind/hive-mind-stop.md +0 -8
  240. package/agentic-flow/.claude/commands/hive-mind/hive-mind-wizard.md +0 -8
  241. package/agentic-flow/.claude/commands/hive-mind/hive-mind.md +0 -27
  242. package/agentic-flow/.claude/commands/hooks/README.md +0 -11
  243. package/agentic-flow/.claude/commands/hooks/overview.md +0 -58
  244. package/agentic-flow/.claude/commands/hooks/post-edit.md +0 -117
  245. package/agentic-flow/.claude/commands/hooks/post-task.md +0 -112
  246. package/agentic-flow/.claude/commands/hooks/pre-edit.md +0 -113
  247. package/agentic-flow/.claude/commands/hooks/pre-task.md +0 -111
  248. package/agentic-flow/.claude/commands/hooks/session-end.md +0 -118
  249. package/agentic-flow/.claude/commands/hooks/setup.md +0 -103
  250. package/agentic-flow/.claude/commands/monitoring/README.md +0 -9
  251. package/agentic-flow/.claude/commands/monitoring/agent-metrics.md +0 -25
  252. package/agentic-flow/.claude/commands/monitoring/agents.md +0 -44
  253. package/agentic-flow/.claude/commands/monitoring/real-time-view.md +0 -25
  254. package/agentic-flow/.claude/commands/monitoring/status.md +0 -46
  255. package/agentic-flow/.claude/commands/monitoring/swarm-monitor.md +0 -25
  256. package/agentic-flow/.claude/commands/optimization/README.md +0 -9
  257. package/agentic-flow/.claude/commands/optimization/auto-topology.md +0 -62
  258. package/agentic-flow/.claude/commands/optimization/cache-manage.md +0 -25
  259. package/agentic-flow/.claude/commands/optimization/parallel-execute.md +0 -25
  260. package/agentic-flow/.claude/commands/optimization/parallel-execution.md +0 -50
  261. package/agentic-flow/.claude/commands/optimization/topology-optimize.md +0 -25
  262. package/agentic-flow/.claude/commands/pair/commands.md +0 -546
  263. package/agentic-flow/.claude/commands/pair/config.md +0 -510
  264. package/agentic-flow/.claude/commands/pair/examples.md +0 -512
  265. package/agentic-flow/.claude/commands/pair/modes.md +0 -348
  266. package/agentic-flow/.claude/commands/pair/session.md +0 -407
  267. package/agentic-flow/.claude/commands/pair/start.md +0 -209
  268. package/agentic-flow/.claude/commands/sparc/analyzer.md +0 -52
  269. package/agentic-flow/.claude/commands/sparc/architect.md +0 -53
  270. package/agentic-flow/.claude/commands/sparc/batch-executor.md +0 -54
  271. package/agentic-flow/.claude/commands/sparc/coder.md +0 -54
  272. package/agentic-flow/.claude/commands/sparc/debugger.md +0 -54
  273. package/agentic-flow/.claude/commands/sparc/designer.md +0 -53
  274. package/agentic-flow/.claude/commands/sparc/documenter.md +0 -54
  275. package/agentic-flow/.claude/commands/sparc/innovator.md +0 -54
  276. package/agentic-flow/.claude/commands/sparc/memory-manager.md +0 -54
  277. package/agentic-flow/.claude/commands/sparc/optimizer.md +0 -54
  278. package/agentic-flow/.claude/commands/sparc/orchestrator.md +0 -132
  279. package/agentic-flow/.claude/commands/sparc/researcher.md +0 -54
  280. package/agentic-flow/.claude/commands/sparc/reviewer.md +0 -54
  281. package/agentic-flow/.claude/commands/sparc/sparc-modes.md +0 -174
  282. package/agentic-flow/.claude/commands/sparc/swarm-coordinator.md +0 -54
  283. package/agentic-flow/.claude/commands/sparc/tdd.md +0 -54
  284. package/agentic-flow/.claude/commands/sparc/tester.md +0 -54
  285. package/agentic-flow/.claude/commands/sparc/workflow-manager.md +0 -54
  286. package/agentic-flow/.claude/commands/stream-chain/pipeline.md +0 -121
  287. package/agentic-flow/.claude/commands/stream-chain/run.md +0 -70
  288. package/agentic-flow/.claude/commands/swarm/README.md +0 -15
  289. package/agentic-flow/.claude/commands/swarm/analysis.md +0 -95
  290. package/agentic-flow/.claude/commands/swarm/development.md +0 -96
  291. package/agentic-flow/.claude/commands/swarm/examples.md +0 -168
  292. package/agentic-flow/.claude/commands/swarm/maintenance.md +0 -102
  293. package/agentic-flow/.claude/commands/swarm/optimization.md +0 -117
  294. package/agentic-flow/.claude/commands/swarm/research.md +0 -136
  295. package/agentic-flow/.claude/commands/swarm/swarm-analysis.md +0 -8
  296. package/agentic-flow/.claude/commands/swarm/swarm-background.md +0 -8
  297. package/agentic-flow/.claude/commands/swarm/swarm-init.md +0 -19
  298. package/agentic-flow/.claude/commands/swarm/swarm-modes.md +0 -8
  299. package/agentic-flow/.claude/commands/swarm/swarm-monitor.md +0 -8
  300. package/agentic-flow/.claude/commands/swarm/swarm-spawn.md +0 -19
  301. package/agentic-flow/.claude/commands/swarm/swarm-status.md +0 -8
  302. package/agentic-flow/.claude/commands/swarm/swarm-strategies.md +0 -8
  303. package/agentic-flow/.claude/commands/swarm/swarm.md +0 -27
  304. package/agentic-flow/.claude/commands/swarm/testing.md +0 -131
  305. package/agentic-flow/.claude/commands/training/README.md +0 -9
  306. package/agentic-flow/.claude/commands/training/model-update.md +0 -25
  307. package/agentic-flow/.claude/commands/training/neural-patterns.md +0 -74
  308. package/agentic-flow/.claude/commands/training/neural-train.md +0 -25
  309. package/agentic-flow/.claude/commands/training/pattern-learn.md +0 -25
  310. package/agentic-flow/.claude/commands/training/specialization.md +0 -63
  311. package/agentic-flow/.claude/commands/truth/start.md +0 -143
  312. package/agentic-flow/.claude/commands/verify/check.md +0 -50
  313. package/agentic-flow/.claude/commands/verify/start.md +0 -128
  314. package/agentic-flow/.claude/commands/workflows/README.md +0 -9
  315. package/agentic-flow/.claude/commands/workflows/development.md +0 -78
  316. package/agentic-flow/.claude/commands/workflows/research.md +0 -63
  317. package/agentic-flow/.claude/commands/workflows/workflow-create.md +0 -25
  318. package/agentic-flow/.claude/commands/workflows/workflow-execute.md +0 -25
  319. package/agentic-flow/.claude/commands/workflows/workflow-export.md +0 -25
  320. package/agentic-flow/.claude/helpers/checkpoint-manager.sh +0 -251
  321. package/agentic-flow/.claude/helpers/github-safe.js +0 -106
  322. package/agentic-flow/.claude/helpers/github-setup.sh +0 -28
  323. package/agentic-flow/.claude/helpers/quick-start.sh +0 -19
  324. package/agentic-flow/.claude/helpers/setup-mcp.sh +0 -18
  325. package/agentic-flow/.claude/helpers/standard-checkpoint-hooks.sh +0 -179
  326. package/agentic-flow/.claude/settings.json +0 -114
  327. package/agentic-flow/.claude/settings.local.json +0 -14
  328. package/agentic-flow/.claude/skills/skill-builder/.claude-flow/metrics/agent-metrics.json +0 -1
  329. package/agentic-flow/AGENT-BOOSTER-STATUS.md +0 -292
  330. package/agentic-flow/CHANGELOG-v1.3.0.md +0 -120
  331. package/agentic-flow/CHANGELOG.md +0 -1023
  332. package/agentic-flow/COMPLETION_REPORT_v1.7.1.md +0 -335
  333. package/agentic-flow/DOCKER-VERIFICATION.md +0 -207
  334. package/agentic-flow/IMPLEMENTATION_SUMMARY_v1.7.1.md +0 -241
  335. package/agentic-flow/NPX_AGENTDB_SETUP.md +0 -175
  336. package/agentic-flow/PUBLISH_GUIDE.md +0 -438
  337. package/agentic-flow/PUBLISH_SUMMARY_v1.7.1.md +0 -198
  338. package/agentic-flow/Python/AddTwoNumbers.py +0 -2
  339. package/agentic-flow/README.md +0 -577
  340. package/agentic-flow/RELEASE_NOTES_v1.7.0.md +0 -297
  341. package/agentic-flow/RELEASE_v1.7.1.md +0 -327
  342. package/agentic-flow/SUPABASE-INTEGRATION-COMPLETE.md +0 -357
  343. package/agentic-flow/TESTING_QUICK_START.md +0 -223
  344. package/agentic-flow/TOOL-EMULATION-INTEGRATION-ISSUE.md +0 -669
  345. package/agentic-flow/VALIDATION_v1.7.1.md +0 -234
  346. package/agentic-flow/add_two_numbers.py +0 -2
  347. package/agentic-flow/agentdb.db +0 -0
  348. package/agentic-flow/agentic-flow/.claude-flow/metrics/agent-metrics.json +0 -1
  349. package/agentic-flow/agentic-flow/.claude-flow/metrics/performance.json +0 -87
  350. package/agentic-flow/agentic-flow/.claude-flow/metrics/task-metrics.json +0 -10
  351. package/agentic-flow/app/app.py +0 -0
  352. package/agentic-flow/config/.mcp.json +0 -22
  353. package/agentic-flow/config/router.config.example.json +0 -224
  354. package/agentic-flow/config/router.config.json +0 -224
  355. package/agentic-flow/deployment/.claude-settings.json +0 -14
  356. package/agentic-flow/docker/claude-agent-sdk/docker/claude-agent-sdk/FASTMCP_SUMMARY.md +0 -369
  357. package/agentic-flow/docker/claude-agent-sdk/docker/claude-agent-sdk/docs/ARCHITECTURE.md +0 -385
  358. package/agentic-flow/docker/claude-agent-sdk/docker/claude-agent-sdk/docs/fastmcp-implementation.md +0 -351
  359. package/agentic-flow/docker/claude-agent-sdk/docker/claude-agent-sdk/docs/fastmcp-quick-start.md +0 -358
  360. package/agentic-flow/docker/claude-agent-sdk/docker/claude-agent-sdk/src/mcp/fastmcp/README.md +0 -340
  361. package/agentic-flow/docker/fastmcp-test.Dockerfile +0 -24
  362. package/agentic-flow/docker/federation-test/.claude-flow/metrics/agent-metrics.json +0 -1
  363. package/agentic-flow/docker/federation-test/.claude-flow/metrics/performance.json +0 -87
  364. package/agentic-flow/docker/federation-test/.claude-flow/metrics/task-metrics.json +0 -10
  365. package/agentic-flow/docker/federation-test/README.md +0 -314
  366. package/agentic-flow/docker/federation-test/run-test.sh +0 -65
  367. package/agentic-flow/docker/federation-test/standalone-agent.js +0 -180
  368. package/agentic-flow/docker/federation-test/standalone-hub.js +0 -85
  369. package/agentic-flow/docker/federation-test/test-published-hub.js +0 -66
  370. package/agentic-flow/docker/test-instance/.claude-flow/metrics/agent-metrics.json +0 -1
  371. package/agentic-flow/docker/test-instance/.claude-flow/metrics/performance.json +0 -87
  372. package/agentic-flow/docker/test-instance/.claude-flow/metrics/task-metrics.json +0 -10
  373. package/agentic-flow/docker/test-instance/.env.example +0 -51
  374. package/agentic-flow/docker/test-instance/COMPREHENSIVE_TEST_RESULTS.md +0 -766
  375. package/agentic-flow/docker/test-instance/DOCKER_VALIDATION_SUMMARY.md +0 -417
  376. package/agentic-flow/docker/test-instance/FIX_VALIDATION_REPORT.md +0 -619
  377. package/agentic-flow/docker/test-instance/INDEX.md +0 -282
  378. package/agentic-flow/docker/test-instance/QUICK_START.md +0 -217
  379. package/agentic-flow/docker/test-instance/README.md +0 -266
  380. package/agentic-flow/docker/test-instance/VALIDATION_REPORT.md +0 -424
  381. package/agentic-flow/docker/test-instance/test-model-config.md +0 -69
  382. package/agentic-flow/docker/test-instance/test-runner.sh +0 -91
  383. package/agentic-flow/docker/test-v1.1.10.dockerfile +0 -12
  384. package/agentic-flow/docker/test-validation.sh +0 -37
  385. package/agentic-flow/docker-test.sh +0 -77
  386. package/agentic-flow/docs/.claude-flow/metrics/agent-metrics.json +0 -1
  387. package/agentic-flow/docs/.claude-flow/metrics/performance.json +0 -87
  388. package/agentic-flow/docs/.claude-flow/metrics/task-metrics.json +0 -10
  389. package/agentic-flow/docs/CLAUDE.md +0 -352
  390. package/agentic-flow/docs/INDEX.md +0 -279
  391. package/agentic-flow/docs/LICENSE +0 -21
  392. package/agentic-flow/docs/architecture/EXECUTIVE_SUMMARY.md +0 -310
  393. package/agentic-flow/docs/architecture/IMPROVEMENT_PLAN.md +0 -11
  394. package/agentic-flow/docs/architecture/INTEGRATION-STATUS.md +0 -290
  395. package/agentic-flow/docs/architecture/MULTI_MODEL_ROUTER_PLAN.md +0 -620
  396. package/agentic-flow/docs/architecture/PACKAGE_STRUCTURE.md +0 -199
  397. package/agentic-flow/docs/architecture/QUIC-IMPLEMENTATION-SUMMARY.md +0 -490
  398. package/agentic-flow/docs/architecture/QUIC-SWARM-INTEGRATION.md +0 -593
  399. package/agentic-flow/docs/architecture/QUICK_WINS.md +0 -333
  400. package/agentic-flow/docs/architecture/README.md +0 -15
  401. package/agentic-flow/docs/architecture/RESEARCH_SUMMARY.md +0 -652
  402. package/agentic-flow/docs/guides/.claude-flow/metrics/agent-metrics.json +0 -1
  403. package/agentic-flow/docs/guides/.claude-flow/metrics/performance.json +0 -9
  404. package/agentic-flow/docs/guides/.claude-flow/metrics/task-metrics.json +0 -10
  405. package/agentic-flow/docs/guides/ADDING-MCP-SERVERS-CLI.md +0 -515
  406. package/agentic-flow/docs/guides/ADDING-MCP-SERVERS.md +0 -642
  407. package/agentic-flow/docs/guides/AGENT-BOOSTER.md +0 -435
  408. package/agentic-flow/docs/guides/ALTERNATIVE_LLM_MODELS.md +0 -524
  409. package/agentic-flow/docs/guides/CLAUDE-CODE-INTEGRATION.md +0 -403
  410. package/agentic-flow/docs/guides/DEPLOYMENT.md +0 -906
  411. package/agentic-flow/docs/guides/DOCKER_AGENT_USAGE.md +0 -352
  412. package/agentic-flow/docs/guides/IMPLEMENTATION_EXAMPLES.md +0 -960
  413. package/agentic-flow/docs/guides/MCP-TOOLS.md +0 -1166
  414. package/agentic-flow/docs/guides/MODEL-ID-MAPPING.md +0 -193
  415. package/agentic-flow/docs/guides/MULTI-MODEL-ROUTER.md +0 -702
  416. package/agentic-flow/docs/guides/NPM-PUBLISH.md +0 -218
  417. package/agentic-flow/docs/guides/ONNX-PROXY-IMPLEMENTATION.md +0 -254
  418. package/agentic-flow/docs/guides/ONNX_CLI_USAGE.md +0 -344
  419. package/agentic-flow/docs/guides/ONNX_OPTIMIZATION_GUIDE.md +0 -665
  420. package/agentic-flow/docs/guides/OPENROUTER_DEPLOYMENT.md +0 -495
  421. package/agentic-flow/docs/guides/PROXY-ARCHITECTURE-AND-EXTENSION.md +0 -708
  422. package/agentic-flow/docs/guides/QUIC-SWARM-QUICKSTART.md +0 -543
  423. package/agentic-flow/docs/guides/README.md +0 -17
  424. package/agentic-flow/docs/guides/REASONINGBANK.md +0 -721
  425. package/agentic-flow/docs/guides/STANDALONE_PROXY_GUIDE.md +0 -437
  426. package/agentic-flow/docs/guides/agent-sdk.md +0 -234
  427. package/agentic-flow/docs/reports/QUIC_PHASE1_COMPLETE.md +0 -409
  428. package/agentic-flow/docs/reports/QUIC_PHASE1_COMPLETION.md +0 -323
  429. package/agentic-flow/docs/reviews/quic-implementation-review.md +0 -1076
  430. package/agentic-flow/docs/router/.claude-flow/metrics/agent-metrics.json +0 -1
  431. package/agentic-flow/docs/router/.claude-flow/metrics/performance.json +0 -9
  432. package/agentic-flow/docs/router/.claude-flow/metrics/task-metrics.json +0 -10
  433. package/agentic-flow/examples/PHASE-2-INTEGRATION-GUIDE.md +0 -380
  434. package/agentic-flow/examples/PHASE-2-TEST-REPORT.md +0 -325
  435. package/agentic-flow/examples/REGRESSION-TEST-RESULTS.md +0 -334
  436. package/agentic-flow/examples/TOOL-EMULATION-ARCHITECTURE.md +0 -473
  437. package/agentic-flow/examples/VALIDATION-SUMMARY.md +0 -323
  438. package/agentic-flow/examples/agentdb-memory-patterns/.claude-flow/metrics/agent-metrics.json +0 -1
  439. package/agentic-flow/examples/agentdb-memory-patterns/.claude-flow/metrics/performance.json +0 -87
  440. package/agentic-flow/examples/agentdb-memory-patterns/.claude-flow/metrics/task-metrics.json +0 -10
  441. package/agentic-flow/examples/crispr-cas13-pipeline/.github/workflows/ci.yml +0 -341
  442. package/agentic-flow/examples/crispr-cas13-pipeline/CONTRIBUTING.md +0 -388
  443. package/agentic-flow/examples/crispr-cas13-pipeline/Cargo.lock +0 -5323
  444. package/agentic-flow/examples/crispr-cas13-pipeline/Cargo.toml +0 -105
  445. package/agentic-flow/examples/crispr-cas13-pipeline/DELIVERABLES.md +0 -140
  446. package/agentic-flow/examples/crispr-cas13-pipeline/LICENSE +0 -32
  447. package/agentic-flow/examples/crispr-cas13-pipeline/PROJECT_SUMMARY.md +0 -515
  448. package/agentic-flow/examples/crispr-cas13-pipeline/PUBLISHING_NOTES.md +0 -171
  449. package/agentic-flow/examples/crispr-cas13-pipeline/PUBLISH_CHECKLIST.md +0 -216
  450. package/agentic-flow/examples/crispr-cas13-pipeline/README.md +0 -591
  451. package/agentic-flow/examples/crispr-cas13-pipeline/TEST_SUITE_SUMMARY.md +0 -318
  452. package/agentic-flow/examples/crispr-cas13-pipeline/benches/alignment_benchmark.rs +0 -207
  453. package/agentic-flow/examples/crispr-cas13-pipeline/benches/api_benchmark.rs +0 -346
  454. package/agentic-flow/examples/crispr-cas13-pipeline/benches/comprehensive_benchmarks.rs +0 -362
  455. package/agentic-flow/examples/crispr-cas13-pipeline/benches/immune_analysis_benchmark.rs +0 -369
  456. package/agentic-flow/examples/crispr-cas13-pipeline/benches/offtarget_prediction_benchmark.rs +0 -291
  457. package/agentic-flow/examples/crispr-cas13-pipeline/crates/alignment-engine/Cargo.toml +0 -23
  458. package/agentic-flow/examples/crispr-cas13-pipeline/crates/alignment-engine/src/bwa.rs +0 -255
  459. package/agentic-flow/examples/crispr-cas13-pipeline/crates/alignment-engine/src/error.rs +0 -34
  460. package/agentic-flow/examples/crispr-cas13-pipeline/crates/alignment-engine/src/lib.rs +0 -136
  461. package/agentic-flow/examples/crispr-cas13-pipeline/crates/alignment-engine/src/quality.rs +0 -287
  462. package/agentic-flow/examples/crispr-cas13-pipeline/crates/alignment-engine/tests/alignment_test.rs +0 -230
  463. package/agentic-flow/examples/crispr-cas13-pipeline/crates/api-service/Cargo.toml +0 -32
  464. package/agentic-flow/examples/crispr-cas13-pipeline/crates/api-service/src/error.rs +0 -38
  465. package/agentic-flow/examples/crispr-cas13-pipeline/crates/api-service/src/main.rs +0 -41
  466. package/agentic-flow/examples/crispr-cas13-pipeline/crates/api-service/src/routes.rs +0 -56
  467. package/agentic-flow/examples/crispr-cas13-pipeline/crates/api-service/tests/api_test.rs +0 -306
  468. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/Cargo.toml +0 -17
  469. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/src/error.rs +0 -31
  470. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/src/expression.rs +0 -313
  471. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/src/lib.rs +0 -27
  472. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/src/metadata.rs +0 -302
  473. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/src/sequencing.rs +0 -240
  474. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/src/targets.rs +0 -281
  475. package/agentic-flow/examples/crispr-cas13-pipeline/crates/data-models/tests/models_test.rs +0 -155
  476. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/Cargo.toml +0 -24
  477. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/src/deseq.rs +0 -265
  478. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/src/error.rs +0 -28
  479. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/src/lib.rs +0 -10
  480. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/src/normalization.rs +0 -173
  481. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/src/pathways.rs +0 -195
  482. package/agentic-flow/examples/crispr-cas13-pipeline/crates/immune-analyzer/tests/analysis_test.rs +0 -258
  483. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/Cargo.toml +0 -26
  484. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/src/error.rs +0 -34
  485. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/src/features.rs +0 -272
  486. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/src/lib.rs +0 -72
  487. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/src/ml_model.rs +0 -264
  488. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/src/scoring.rs +0 -292
  489. package/agentic-flow/examples/crispr-cas13-pipeline/crates/offtarget-predictor/tests/prediction_test.rs +0 -245
  490. package/agentic-flow/examples/crispr-cas13-pipeline/crates/processing-orchestrator/Cargo.toml +0 -26
  491. package/agentic-flow/examples/crispr-cas13-pipeline/crates/processing-orchestrator/src/jobs.rs +0 -27
  492. package/agentic-flow/examples/crispr-cas13-pipeline/crates/processing-orchestrator/src/main.rs +0 -35
  493. package/agentic-flow/examples/crispr-cas13-pipeline/crates/processing-orchestrator/src/scheduler.rs +0 -24
  494. package/agentic-flow/examples/crispr-cas13-pipeline/crates/processing-orchestrator/src/workers.rs +0 -17
  495. package/agentic-flow/examples/crispr-cas13-pipeline/docs/ARCHITECTURAL_DECISIONS.md +0 -429
  496. package/agentic-flow/examples/crispr-cas13-pipeline/docs/ARCHITECTURE.md +0 -2964
  497. package/agentic-flow/examples/crispr-cas13-pipeline/docs/ARCHITECTURE_SUMMARY.md +0 -286
  498. package/agentic-flow/examples/crispr-cas13-pipeline/docs/BENCHMARKS.md +0 -380
  499. package/agentic-flow/examples/crispr-cas13-pipeline/docs/PSEUDOCODE.md +0 -354
  500. package/agentic-flow/examples/crispr-cas13-pipeline/docs/REVIEW_REPORT.md +0 -543
  501. package/agentic-flow/examples/crispr-cas13-pipeline/docs/RIGHTS_PRESERVING_PLATFORM.md +0 -342
  502. package/agentic-flow/examples/crispr-cas13-pipeline/docs/SECURITY_AUDIT.md +0 -756
  503. package/agentic-flow/examples/crispr-cas13-pipeline/docs/SPECIFICATION.md +0 -719
  504. package/agentic-flow/examples/crispr-cas13-pipeline/docs/TESTING_GUIDE.md +0 -575
  505. package/agentic-flow/examples/crispr-cas13-pipeline/docs/algorithms/README.md +0 -121
  506. package/agentic-flow/examples/crispr-cas13-pipeline/docs/algorithms/alignment-module.md +0 -868
  507. package/agentic-flow/examples/crispr-cas13-pipeline/docs/algorithms/expression-module.md +0 -928
  508. package/agentic-flow/examples/crispr-cas13-pipeline/docs/algorithms/offtarget-module.md +0 -1030
  509. package/agentic-flow/examples/crispr-cas13-pipeline/docs/algorithms/reporting-module.md +0 -1135
  510. package/agentic-flow/examples/crispr-cas13-pipeline/docs/api-spec.openapi.yaml +0 -1258
  511. package/agentic-flow/examples/crispr-cas13-pipeline/docs/architecture-diagrams/c4-component.md +0 -240
  512. package/agentic-flow/examples/crispr-cas13-pipeline/docs/architecture-diagrams/c4-container.md +0 -223
  513. package/agentic-flow/examples/crispr-cas13-pipeline/docs/architecture-diagrams/c4-context.md +0 -86
  514. package/agentic-flow/examples/crispr-cas13-pipeline/docs/architecture-diagrams/sequence-diagrams.md +0 -499
  515. package/agentic-flow/examples/crispr-cas13-pipeline/docs/data-layer/schema.sql +0 -363
  516. package/agentic-flow/examples/crispr-cas13-pipeline/docs/data-models.yaml +0 -1639
  517. package/agentic-flow/examples/crispr-cas13-pipeline/docs/database-schemas.sql +0 -731
  518. package/agentic-flow/examples/crispr-cas13-pipeline/docs/deployment/alignment-service.yaml +0 -171
  519. package/agentic-flow/examples/crispr-cas13-pipeline/docs/deployment/api-gateway.yaml +0 -253
  520. package/agentic-flow/examples/crispr-cas13-pipeline/docs/deployment/namespace.yaml +0 -26
  521. package/agentic-flow/examples/crispr-cas13-pipeline/docs/deployment/postgresql.yaml +0 -119
  522. package/agentic-flow/examples/crispr-cas13-pipeline/docs/docker/alignment-service/requirements.txt +0 -18
  523. package/agentic-flow/examples/crispr-cas13-pipeline/docs/docker/diff-expr-service/requirements.txt +0 -19
  524. package/agentic-flow/examples/crispr-cas13-pipeline/docs/docker/off-target-service/requirements.txt +0 -27
  525. package/agentic-flow/examples/crispr-cas13-pipeline/docs/flowcharts/README.md +0 -130
  526. package/agentic-flow/examples/crispr-cas13-pipeline/docs/flowcharts/alignment-flowchart.md +0 -221
  527. package/agentic-flow/examples/crispr-cas13-pipeline/docs/flowcharts/expression-flowchart.md +0 -426
  528. package/agentic-flow/examples/crispr-cas13-pipeline/docs/flowcharts/offtarget-flowchart.md +0 -317
  529. package/agentic-flow/examples/crispr-cas13-pipeline/docs/flowcharts/reporting-flowchart.md +0 -502
  530. package/agentic-flow/examples/crispr-cas13-pipeline/docs/mongodb-collections.json +0 -759
  531. package/agentic-flow/examples/crispr-cas13-pipeline/docs/monitoring/alerts.yml +0 -291
  532. package/agentic-flow/examples/crispr-cas13-pipeline/docs/monitoring/grafana-dashboard-system-overview.json +0 -236
  533. package/agentic-flow/examples/crispr-cas13-pipeline/docs/monitoring/prometheus.yml +0 -213
  534. package/agentic-flow/examples/crispr-cas13-pipeline/docs/security/oauth2-authentication.md +0 -478
  535. package/agentic-flow/examples/crispr-cas13-pipeline/src/api/gateway.rs +0 -257
  536. package/agentic-flow/examples/crispr-cas13-pipeline/src/api/mod.rs +0 -1
  537. package/agentic-flow/examples/crispr-cas13-pipeline/src/audit/logger.rs +0 -345
  538. package/agentic-flow/examples/crispr-cas13-pipeline/src/audit/mod.rs +0 -1
  539. package/agentic-flow/examples/crispr-cas13-pipeline/src/governance/mod.rs +0 -1
  540. package/agentic-flow/examples/crispr-cas13-pipeline/src/governance/policy.rs +0 -339
  541. package/agentic-flow/examples/crispr-cas13-pipeline/src/lib.rs +0 -227
  542. package/agentic-flow/examples/crispr-cas13-pipeline/src/main.rs +0 -114
  543. package/agentic-flow/examples/crispr-cas13-pipeline/src/privacy/differential.rs +0 -303
  544. package/agentic-flow/examples/crispr-cas13-pipeline/src/privacy/mod.rs +0 -1
  545. package/agentic-flow/examples/crispr-cas13-pipeline/src/services/grpc.rs +0 -358
  546. package/agentic-flow/examples/crispr-cas13-pipeline/src/services/mod.rs +0 -1
  547. package/agentic-flow/examples/crispr-cas13-pipeline/tests/README.md +0 -336
  548. package/agentic-flow/examples/crispr-cas13-pipeline/tests/TESTING_SUMMARY.md +0 -386
  549. package/agentic-flow/examples/crispr-cas13-pipeline/tests/TEST_COVERAGE_REPORT.md +0 -347
  550. package/agentic-flow/examples/crispr-cas13-pipeline/tests/fixtures/mod.rs +0 -400
  551. package/agentic-flow/examples/crispr-cas13-pipeline/tests/integration/enhanced_integration_tests.rs +0 -432
  552. package/agentic-flow/examples/crispr-cas13-pipeline/tests/integration_test.rs +0 -340
  553. package/agentic-flow/examples/crispr-cas13-pipeline/tests/load_testing_k6.js +0 -269
  554. package/agentic-flow/examples/crispr-cas13-pipeline/tests/load_testing_locust.py +0 -290
  555. package/agentic-flow/examples/crispr-cas13-pipeline/tests/property/enhanced_property_tests.rs +0 -479
  556. package/agentic-flow/examples/crispr-cas13-pipeline/tests/property_tests.rs +0 -371
  557. package/agentic-flow/examples/crispr-cas13-pipeline/tests/rights_preserving_test.rs +0 -251
  558. package/agentic-flow/examples/crispr-cas13-pipeline/tests/unit/alignment_tests.rs +0 -307
  559. package/agentic-flow/examples/crispr-cas13-pipeline/tests/unit/api_service_tests.rs +0 -376
  560. package/agentic-flow/examples/crispr-cas13-pipeline/tests/unit/data_models_tests.rs +0 -283
  561. package/agentic-flow/examples/crispr-cas13-pipeline/tests/unit/immune_analyzer_tests.rs +0 -374
  562. package/agentic-flow/examples/crispr-cas13-pipeline/tests/unit/offtarget_tests.rs +0 -334
  563. package/agentic-flow/examples/crispr-cas13-pipeline/tests/unit/orchestrator_tests.rs +0 -466
  564. package/agentic-flow/examples/federated-agentdb/README.md +0 -494
  565. package/agentic-flow/memory-backup.json +0 -48
  566. package/agentic-flow/package-lock.json +0 -3974
  567. package/agentic-flow/package.json +0 -182
  568. package/agentic-flow/patches/agentdb-fix-imports.patch +0 -13
  569. package/agentic-flow/path/to/file.py +0 -2
  570. package/agentic-flow/path/to/your/script.py +0 -2
  571. package/agentic-flow/python/calculation.py +0 -1
  572. package/agentic-flow/python/operation.py +0 -1
  573. package/agentic-flow/run-agentdb.sh +0 -8
  574. package/agentic-flow/supabase/.temp/cli-latest +0 -1
  575. package/agentic-flow/supabase/.temp/gotrue-version +0 -1
  576. package/agentic-flow/supabase/.temp/pooler-url +0 -1
  577. package/agentic-flow/supabase/.temp/postgres-version +0 -1
  578. package/agentic-flow/supabase/.temp/project-ref +0 -1
  579. package/agentic-flow/supabase/.temp/rest-version +0 -1
  580. package/agentic-flow/supabase/.temp/storage-migration +0 -1
  581. package/agentic-flow/supabase/.temp/storage-version +0 -1
  582. package/agentic-flow/test-tool-commands.sh +0 -26
  583. package/agentic-llm/DEPLOYMENT_STATUS_UPDATE.md +0 -30
  584. package/agentic-llm/MONITOR_SUMMARY.md +0 -116
  585. package/agentic-llm/benchmarks/DEPLOYMENT_SUMMARY.md +0 -106
  586. package/agentic-llm/benchmarks/benchmark.py +0 -419
  587. package/agentic-llm/benchmarks/comparison/optimization_comparison.json +0 -57
  588. package/agentic-llm/benchmarks/finetune_comparison.py +0 -252
  589. package/agentic-llm/benchmarks/results/.gitkeep +0 -2
  590. package/agentic-llm/benchmarks/results/README.md +0 -59
  591. package/agentic-llm/benchmarks/results/agent-booster-results.json +0 -116
  592. package/agentic-llm/benchmarks/results/morph-baseline-results.json +0 -168
  593. package/agentic-llm/benchmarks/run_comparison.py +0 -246
  594. package/agentic-llm/check-training.sh +0 -27
  595. package/agentic-llm/claude_sdk/integration.py +0 -335
  596. package/agentic-llm/cloudrun/cloud_runner.py +0 -390
  597. package/agentic-llm/cloudrun/deploy.sh +0 -83
  598. package/agentic-llm/cloudrun/entrypoint.sh +0 -10
  599. package/agentic-llm/cloudrun/health_server.py +0 -114
  600. package/agentic-llm/cloudrun/setup-secrets.sh +0 -26
  601. package/agentic-llm/cloudrun/upload_to_huggingface.py +0 -277
  602. package/agentic-llm/configs/training_config.json +0 -71
  603. package/agentic-llm/deployment/DEPLOYMENT_INSTRUCTIONS.md +0 -93
  604. package/agentic-llm/deployment/fly.toml +0 -52
  605. package/agentic-llm/docs/BENCHMARK_OPTIMIZATION_GUIDE.md +0 -435
  606. package/agentic-llm/docs/CLOUD_RUN_DEPLOYMENT.md +0 -368
  607. package/agentic-llm/docs/DEPLOYMENT_GUIDE.md +0 -475
  608. package/agentic-llm/docs/DEPLOYMENT_READY.txt +0 -98
  609. package/agentic-llm/docs/DEPLOYMENT_STATUS.md +0 -389
  610. package/agentic-llm/docs/DEPLOYMENT_SUMMARY.md +0 -358
  611. package/agentic-llm/docs/DEPLOY_STATUS.md +0 -69
  612. package/agentic-llm/docs/FINETUNING_GUIDE.md +0 -483
  613. package/agentic-llm/docs/INDEX.md +0 -43
  614. package/agentic-llm/docs/OPTIMIZATION_RESULTS.md +0 -375
  615. package/agentic-llm/docs/PHI4_FINETUNING_RESEARCH.md +0 -1352
  616. package/agentic-llm/docs/QUICKSTART.md +0 -124
  617. package/agentic-llm/docs/README.md +0 -389
  618. package/agentic-llm/docs/TRAINING_MONITOR.md +0 -77
  619. package/agentic-llm/docs/USAGE_GUIDE.md +0 -499
  620. package/agentic-llm/monitor-loop.sh +0 -52
  621. package/agentic-llm/monitor-training.sh +0 -56
  622. package/agentic-llm/quantization/quantize.py +0 -255
  623. package/agentic-llm/requirements.txt +0 -43
  624. package/agentic-llm/scripts/deploy.sh +0 -120
  625. package/agentic-llm/scripts/run_benchmarks.sh +0 -53
  626. package/agentic-llm/scripts/run_finetuning.sh +0 -90
  627. package/agentic-llm/scripts/test_local.sh +0 -77
  628. package/agentic-llm/training/data/mcp_tools_dataset.json +0 -140
  629. package/agentic-llm/training/finetune_mcp.py +0 -306
  630. package/agentic-llm/training/mcp_dataset.py +0 -395
  631. package/agentic-llm/training/train.py +0 -347
  632. package/agentic-llm/validation/data/mcp_validation_set.json +0 -37
  633. package/agentic-llm/validation/mcp_validator.py +0 -267
  634. package/agentic-llm/validation/validator.py +0 -319
  635. package/bench/.claude-flow/metrics/agent-metrics.json +0 -1
  636. package/bench/.claude-flow/metrics/performance.json +0 -9
  637. package/bench/.claude-flow/metrics/task-metrics.json +0 -10
  638. package/bench/BENCHMARK-GUIDE.md +0 -506
  639. package/bench/BENCHMARK-RESULTS-TEMPLATE.md +0 -253
  640. package/bench/COMPLETION-SUMMARY.md +0 -409
  641. package/bench/README.md +0 -217
  642. package/bench/agents/baseline-agent.js +0 -69
  643. package/bench/agents/baseline-agent.ts +0 -78
  644. package/bench/agents/reasoningbank-agent.js +0 -141
  645. package/bench/agents/reasoningbank-agent.ts +0 -173
  646. package/bench/benchmark.js +0 -244
  647. package/bench/benchmark.ts +0 -309
  648. package/bench/config.json +0 -79
  649. package/bench/lib/metrics.js +0 -163
  650. package/bench/lib/metrics.ts +0 -216
  651. package/bench/lib/report-generator.js +0 -252
  652. package/bench/lib/report-generator.ts +0 -266
  653. package/bench/lib/types.js +0 -4
  654. package/bench/lib/types.ts +0 -117
  655. package/bench/package.json +0 -36
  656. package/bench/run-benchmark.sh +0 -67
  657. package/bench/scenarios/api-design-tasks.js +0 -175
  658. package/bench/scenarios/api-design-tasks.ts +0 -199
  659. package/bench/scenarios/coding-tasks.js +0 -199
  660. package/bench/scenarios/coding-tasks.ts +0 -223
  661. package/bench/scenarios/debugging-tasks.js +0 -216
  662. package/bench/scenarios/debugging-tasks.ts +0 -234
  663. package/bench/scenarios/problem-solving-tasks.js +0 -172
  664. package/bench/scenarios/problem-solving-tasks.ts +0 -196
  665. package/bench/tsconfig.json +0 -26
  666. package/benchmarks/quic-transport.bench.ts +0 -584
  667. package/claude-flow +0 -34
  668. package/crates/agentic-flow-quic/.claude-flow/metrics/agent-metrics.json +0 -1
  669. package/crates/agentic-flow-quic/.claude-flow/metrics/performance.json +0 -87
  670. package/crates/agentic-flow-quic/.claude-flow/metrics/task-metrics.json +0 -10
  671. package/crates/agentic-flow-quic/Cargo.toml +0 -66
  672. package/crates/agentic-flow-quic/IMPLEMENTATION.md +0 -299
  673. package/crates/agentic-flow-quic/README.md +0 -75
  674. package/crates/agentic-flow-quic/benches/quic_bench.rs +0 -229
  675. package/crates/agentic-flow-quic/build.rs +0 -23
  676. package/crates/agentic-flow-quic/src/client.rs +0 -242
  677. package/crates/agentic-flow-quic/src/error.rs +0 -100
  678. package/crates/agentic-flow-quic/src/lib.rs +0 -76
  679. package/crates/agentic-flow-quic/src/server.rs +0 -213
  680. package/crates/agentic-flow-quic/src/types.rs +0 -164
  681. package/crates/agentic-flow-quic/src/wasm.rs +0 -143
  682. package/crates/agentic-flow-quic/src/wasm_stub.rs +0 -61
  683. package/crates/agentic-flow-quic/tests/integration_test.rs +0 -254
  684. package/crates/agentic-flow-quic/wasm-pack-build.sh +0 -17
  685. package/crates/sqlite-vector-core/.claude-flow/metrics/agent-metrics.json +0 -1
  686. package/crates/sqlite-vector-core/.claude-flow/metrics/performance.json +0 -87
  687. package/crates/sqlite-vector-core/.claude-flow/metrics/task-metrics.json +0 -10
  688. package/crates/sqlite-vector-core/Cargo.lock +0 -942
  689. package/crates/sqlite-vector-wasm/.claude-flow/metrics/agent-metrics.json +0 -1
  690. package/crates/sqlite-vector-wasm/.claude-flow/metrics/performance.json +0 -87
  691. package/crates/sqlite-vector-wasm/.claude-flow/metrics/task-metrics.json +0 -10
  692. package/crates/sqlite-vector-wasm/Cargo.lock +0 -499
  693. package/docs/README.md +0 -85
  694. package/docs/REORGANIZATION_PLAN.md +0 -102
  695. package/docs/REORGANIZATION_SUMMARY.md +0 -183
  696. package/docs/agent-integration-guide.md +0 -483
  697. package/docs/api/mcp-tools/mcp-documentation-review.md +0 -834
  698. package/docs/api/mcp-tools/mcp-tools-architecture.md +0 -1082
  699. package/docs/architecture/FEDERATED-AGENTDB-EPHEMERAL-AGENTS.md +0 -680
  700. package/docs/architecture/FEDERATION-CLI-VALIDATION-REPORT.md +0 -491
  701. package/docs/features/README.md +0 -87
  702. package/docs/features/agent-booster/00-INDEX.md +0 -230
  703. package/docs/features/agent-booster/00-OVERVIEW.md +0 -454
  704. package/docs/features/agent-booster/01-ARCHITECTURE.md +0 -699
  705. package/docs/features/agent-booster/02-INTEGRATION.md +0 -771
  706. package/docs/features/agent-booster/03-BENCHMARKS.md +0 -616
  707. package/docs/features/agent-booster/04-NPM-SDK.md +0 -673
  708. package/docs/features/agent-booster/GITHUB-ISSUE.md +0 -523
  709. package/docs/features/agent-booster/README.md +0 -44
  710. package/docs/features/agentdb/AGENTDB-INTEGRATION-COMPLETE.md +0 -590
  711. package/docs/features/agentdb/AGENTDB-LEARNING-SYSTEMS-REPORT.md +0 -783
  712. package/docs/features/agentdb/AGENTDB-MCP-SECURITY-AUDIT.md +0 -877
  713. package/docs/features/agentdb/AGENTDB_INTEGRATION_PLAN.md +0 -776
  714. package/docs/features/agentdb/CAUSAL_RECALL_SEARCH_IMPLEMENTATION.md +0 -141
  715. package/docs/features/agentdb/CLI_GUIDE.md +0 -826
  716. package/docs/features/agentdb/CORE_TOOLS_6-10_IMPLEMENTATION.md +0 -376
  717. package/docs/features/agentdb/LEARNING_TOOLS_6-10.md +0 -474
  718. package/docs/features/agentdb/MCP_TOOLS_IMPLEMENTATION.md +0 -373
  719. package/docs/features/agentdb/README.md +0 -86
  720. package/docs/features/agentdb/TEST_SUITE_SUMMARY.md +0 -222
  721. package/docs/features/agentdb/VERSION_1.3.0_RELEASE.md +0 -199
  722. package/docs/features/agentdb/WASM-VECTOR-IMPLEMENTATION.md +0 -422
  723. package/docs/features/agentdb/agentdb-code-quality-analysis.md +0 -1050
  724. package/docs/features/agentdb/agentdb-tools-verification.md +0 -498
  725. package/docs/features/federation/FEDERATION-CLI-INTEGRATION.md +0 -494
  726. package/docs/features/federation/FEDERATION-IMPLEMENTATION-SUMMARY.md +0 -546
  727. package/docs/features/federation/FEDERATION-TEST-REPORT.md +0 -504
  728. package/docs/features/federation/README.md +0 -35
  729. package/docs/features/quic/BUILD_INSTRUCTIONS.md +0 -220
  730. package/docs/features/quic/FINAL-VALIDATION.md +0 -336
  731. package/docs/features/quic/IMPLEMENTATION-COMPLETE-SUMMARY.md +0 -349
  732. package/docs/features/quic/IMPLEMENTATION_STATUS.md +0 -234
  733. package/docs/features/quic/PERFORMANCE-VALIDATION.md +0 -282
  734. package/docs/features/quic/QUIC-INTEGRATION-SUMMARY.md +0 -545
  735. package/docs/features/quic/QUIC-INTEGRATION.md +0 -502
  736. package/docs/features/quic/QUIC-README.md +0 -226
  737. package/docs/features/quic/QUIC-STATUS-OLD.md +0 -513
  738. package/docs/features/quic/QUIC-STATUS.md +0 -451
  739. package/docs/features/quic/QUIC-VALIDATION-REPORT.md +0 -370
  740. package/docs/features/quic/QUIC_FINAL_STATUS.md +0 -399
  741. package/docs/features/quic/QUIC_IMPLEMENTATION_SUMMARY.md +0 -607
  742. package/docs/features/quic/README-CONDENSED.md +0 -447
  743. package/docs/features/quic/README.md +0 -79
  744. package/docs/features/quic/README_QUIC_PHASE1.md +0 -117
  745. package/docs/features/quic/WASM-INTEGRATION-COMPLETE.md +0 -382
  746. package/docs/features/quic/quic-research.md +0 -1415
  747. package/docs/features/quic/quic-tutorial.md +0 -485
  748. package/docs/features/reasoningbank/MEMORY_VALIDATION_REPORT.md +0 -417
  749. package/docs/features/reasoningbank/README.md +0 -64
  750. package/docs/features/reasoningbank/REASONING-AGENTS.md +0 -482
  751. package/docs/features/reasoningbank/REASONINGBANK-BENCHMARK-RESULTS.md +0 -166
  752. package/docs/features/reasoningbank/REASONINGBANK-BENCHMARK.md +0 -396
  753. package/docs/features/reasoningbank/REASONINGBANK-CLI-INTEGRATION.md +0 -455
  754. package/docs/features/reasoningbank/REASONINGBANK-DEMO.md +0 -419
  755. package/docs/features/reasoningbank/REASONINGBANK-VALIDATION.md +0 -532
  756. package/docs/features/reasoningbank/REASONINGBANK_ARCHITECTURE.md +0 -663
  757. package/docs/features/reasoningbank/REASONINGBANK_BACKENDS.md +0 -375
  758. package/docs/features/reasoningbank/REASONINGBANK_FIXES.md +0 -455
  759. package/docs/features/reasoningbank/REASONINGBANK_IMPLEMENTATION_STATUS.md +0 -478
  760. package/docs/features/reasoningbank/REASONINGBANK_INTEGRATION_PLAN.md +0 -1059
  761. package/docs/features/reasoningbank/REASONINGBANK_INVESTIGATION.md +0 -380
  762. package/docs/features/router/README.md +0 -38
  763. package/docs/features/router/ROUTER_CONFIG_REFERENCE.md +0 -577
  764. package/docs/features/router/ROUTER_USER_GUIDE.md +0 -865
  765. package/docs/features/router/TOP20_MODELS_MATRIX.md +0 -80
  766. package/docs/guides/MCP-AUTHENTICATION.md +0 -2017
  767. package/docs/guides/MCP-QUICKSTART.md +0 -521
  768. package/docs/guides/MCP-TROUBLESHOOTING.md +0 -1602
  769. package/docs/guides/NPM_STATS_GUIDE.md +0 -407
  770. package/docs/parallel-execution-implementation.md +0 -525
  771. package/docs/plans/.claude-flow/metrics/agent-metrics.json +0 -1
  772. package/docs/plans/.claude-flow/metrics/performance.json +0 -87
  773. package/docs/plans/.claude-flow/metrics/task-metrics.json +0 -10
  774. package/docs/releases/archive/GITHUB-ISSUE-ADDENDUM-v1.4.6.md +0 -1529
  775. package/docs/releases/archive/GITHUB-ISSUE-BUILD-FIX.md +0 -756
  776. package/docs/releases/archive/GITHUB-ISSUE-REASONINGBANK-BENCHMARK.md +0 -643
  777. package/docs/releases/archive/GITHUB-ISSUE-v1.4.6.md +0 -1453
  778. package/docs/releases/archive/GITHUB-ISSUE-v1.5.0.md +0 -468
  779. package/docs/releases/archive/HOTFIX-v1.2.1.md +0 -315
  780. package/docs/releases/archive/INTEGRATION-COMPLETE.md +0 -291
  781. package/docs/releases/archive/MIGRATION-STATUS.md +0 -118
  782. package/docs/releases/archive/MIGRATION_v1.7.0.md +0 -299
  783. package/docs/releases/archive/NPM-PUBLISH-GUIDE-v1.2.0.md +0 -440
  784. package/docs/releases/archive/PUBLICATION_REPORT_v1.5.11.md +0 -421
  785. package/docs/releases/archive/PUBLISH-COMPLETE-v1.2.0.md +0 -308
  786. package/docs/releases/archive/README.md +0 -82
  787. package/docs/releases/archive/RELEASE-v1.2.0.md +0 -339
  788. package/docs/releases/archive/VALIDATION_REPORT_v1.7.0.md +0 -418
  789. package/docs/releases/archive/ZERO-BUILD-MIGRATION.md +0 -227
  790. package/docs/releases/archive/github-issue-agentdb-integration.md +0 -379
  791. package/docs/releases/archive/v1.4.6-reasoningbank-release.md +0 -541
  792. package/docs/releases/archive/v1.4.7-bugfix.md +0 -212
  793. package/docs/releases/archive/v1.5.14-QUIC-TRANSPORT.md +0 -201
  794. package/docs/releases/archive/v1.5.9-DOCKER-VERIFICATION.md +0 -263
  795. package/docs/releases/archive/v1.5.9-RELEASE-SUMMARY.md +0 -222
  796. package/docs/swarm-optimization-report.md +0 -626
  797. package/index.html +0 -15
  798. package/memory/agents/README.md +0 -31
  799. package/memory/claude-flow@alpha-data.json +0 -5
  800. package/memory/memory-store.json +0 -69
  801. package/memory/sessions/README.md +0 -32
  802. package/src/App.css +0 -5
  803. package/src/App.tsx +0 -15
  804. package/src/components/AgentTypes.tsx +0 -122
  805. package/src/components/CoreComponents.tsx +0 -131
  806. package/src/components/Features.tsx +0 -102
  807. package/src/components/Footer.tsx +0 -159
  808. package/src/components/Hero.tsx +0 -87
  809. package/src/components/PerformanceMetrics.tsx +0 -125
  810. package/src/components/QuickStart.tsx +0 -178
  811. package/src/index.css +0 -87
  812. package/src/main.tsx +0 -10
  813. package/src/pages/LandingPage.tsx +0 -23
  814. package/src/transport/quic.ts +0 -258
  815. package/tailwind.config.ts +0 -79
  816. package/vite.config.ts +0 -20
  817. /package/{agentic-flow/.claude → .claude}/agents/MIGRATION_SUMMARY.md +0 -0
  818. /package/{agentic-flow/.claude → .claude}/agents/README.md +0 -0
  819. /package/{agentic-flow/.claude → .claude}/agents/consensus/README.md +0 -0
  820. /package/{agentic-flow/.claude → .claude}/agents/custom/test-long-runner.md +0 -0
  821. /package/.claude/agents/{reasoning → goal}/agent.md +0 -0
  822. /package/{agentic-flow/.claude → .claude}/agents/optimization/README.md +0 -0
  823. /package/{agentic-flow/.claude → .claude}/agents/payments/agentic-payments.md +0 -0
  824. /package/{agentic-flow/.claude → .claude}/agents/sublinear/consensus-coordinator.md +0 -0
  825. /package/{agentic-flow/.claude → .claude}/agents/sublinear/matrix-optimizer.md +0 -0
  826. /package/{agentic-flow/.claude → .claude}/agents/sublinear/pagerank-analyzer.md +0 -0
  827. /package/{agentic-flow/.claude → .claude}/agents/sublinear/performance-optimizer.md +0 -0
  828. /package/{agentic-flow/.claude → .claude}/agents/sublinear/trading-predictor.md +0 -0
  829. /package/{agentic-flow/.claude → .claude}/agents/swarm/README.md +0 -0
  830. /package/{agentic-flow/.claude → .claude}/agents/test-neural.md +0 -0
  831. /package/{agentic-flow/.claude → .claude}/answer.md +0 -0
  832. /package/{agentic-flow/.claude → .claude}/commands/claude-flow-help.md +0 -0
  833. /package/{agentic-flow/.claude → .claude}/commands/claude-flow-memory.md +0 -0
  834. /package/{agentic-flow/.claude → .claude}/commands/claude-flow-swarm.md +0 -0
  835. /package/{agentic-flow/.claude → .claude}/commands/pair/README.md +0 -0
  836. /package/{agentic-flow/.claude → .claude}/commands/sparc/ask.md +0 -0
  837. /package/{agentic-flow/.claude → .claude}/commands/sparc/code.md +0 -0
  838. /package/{agentic-flow/.claude → .claude}/commands/sparc/debug.md +0 -0
  839. /package/{agentic-flow/.claude → .claude}/commands/sparc/devops.md +0 -0
  840. /package/{agentic-flow/.claude → .claude}/commands/sparc/docs-writer.md +0 -0
  841. /package/{agentic-flow/.claude → .claude}/commands/sparc/integration.md +0 -0
  842. /package/{agentic-flow/.claude → .claude}/commands/sparc/mcp.md +0 -0
  843. /package/{agentic-flow/.claude → .claude}/commands/sparc/post-deployment-monitoring-mode.md +0 -0
  844. /package/{agentic-flow/.claude → .claude}/commands/sparc/refinement-optimization-mode.md +0 -0
  845. /package/{agentic-flow/.claude → .claude}/commands/sparc/security-review.md +0 -0
  846. /package/{agentic-flow/.claude → .claude}/commands/sparc/sparc.md +0 -0
  847. /package/{agentic-flow/.claude → .claude}/commands/sparc/spec-pseudocode.md +0 -0
  848. /package/{agentic-flow/.claude → .claude}/commands/sparc/supabase-admin.md +0 -0
  849. /package/{agentic-flow/.claude → .claude}/commands/sparc/tutorial.md +0 -0
  850. /package/{agentic-flow/.claude → .claude}/commands/sparc.md +0 -0
  851. /package/{agentic-flow/.claude → .claude}/mcp.json +0 -0
  852. /package/{agentic-flow/.claude → .claude}/openrouter-models-research.md +0 -0
  853. /package/{agentic-flow/.claude → .claude}/openrouter-quick-reference.md +0 -0
  854. /package/{agentic-flow/.claude → .claude}/settings-backup.json +0 -0
  855. /package/{agentic-flow/.claude → .claude}/settings-optimized.json +0 -0
  856. /package/{agentic-flow/.claude → .claude}/settings-simple.json +0 -0
  857. /package/{.claude-flow → .claude/skills/.claude-flow}/metrics/agent-metrics.json +0 -0
  858. /package/{agentic-flow/.claude → .claude}/skills/.claude-flow/metrics/performance.json +0 -0
  859. /package/{agentic-flow/.claude → .claude}/skills/.claude-flow/metrics/task-metrics.json +0 -0
  860. /package/{agentic-flow/.claude/skills → .claude/skills/skill-builder}/.claude-flow/metrics/agent-metrics.json +0 -0
  861. /package/{agentic-flow/.claude → .claude}/skills/skill-builder/.claude-flow/metrics/performance.json +0 -0
  862. /package/{agentic-flow/.claude → .claude}/skills/skill-builder/.claude-flow/metrics/task-metrics.json +0 -0
  863. /package/{agentic-flow/dist → dist}/agentdb/benchmarks/comprehensive-benchmark.js +0 -0
  864. /package/{agentic-flow/dist → dist}/agentdb/benchmarks/frontier-benchmark.js +0 -0
  865. /package/{agentic-flow/dist → dist}/agentdb/benchmarks/reflexion-benchmark.js +0 -0
  866. /package/{agentic-flow/dist → dist}/agentdb/cli/agentdb-cli.js +0 -0
  867. /package/{agentic-flow/dist → dist}/agentdb/controllers/CausalMemoryGraph.js +0 -0
  868. /package/{agentic-flow/dist → dist}/agentdb/controllers/CausalRecall.js +0 -0
  869. /package/{agentic-flow/dist → dist}/agentdb/controllers/EmbeddingService.js +0 -0
  870. /package/{agentic-flow/dist → dist}/agentdb/controllers/ExplainableRecall.js +0 -0
  871. /package/{agentic-flow/dist → dist}/agentdb/controllers/NightlyLearner.js +0 -0
  872. /package/{agentic-flow/dist → dist}/agentdb/controllers/ReflexionMemory.js +0 -0
  873. /package/{agentic-flow/dist → dist}/agentdb/controllers/SkillLibrary.js +0 -0
  874. /package/{agentic-flow/dist → dist}/agentdb/controllers/frontier-index.js +0 -0
  875. /package/{agentic-flow/dist → dist}/agentdb/controllers/index.js +0 -0
  876. /package/{agentic-flow/dist → dist}/agentdb/index.js +0 -0
  877. /package/{agentic-flow/dist → dist}/agentdb/optimizations/BatchOperations.js +0 -0
  878. /package/{agentic-flow/dist → dist}/agentdb/optimizations/QueryOptimizer.js +0 -0
  879. /package/{agentic-flow/dist → dist}/agentdb/optimizations/index.js +0 -0
  880. /package/{agentic-flow/dist → dist}/agents/claudeAgent.js +0 -0
  881. /package/{agentic-flow/dist → dist}/agents/claudeAgentDirect.js +0 -0
  882. /package/{agentic-flow/dist → dist}/agents/claudeFlowAgent.js +0 -0
  883. /package/{agentic-flow/dist → dist}/agents/codeReviewAgent.js +0 -0
  884. /package/{agentic-flow/dist → dist}/agents/dataAgent.js +0 -0
  885. /package/{agentic-flow/dist → dist}/agents/directApiAgent.js +0 -0
  886. /package/{agentic-flow/dist → dist}/agents/webResearchAgent.js +0 -0
  887. /package/{agentic-flow/dist → dist}/cli/agent-manager.js +0 -0
  888. /package/{agentic-flow/dist → dist}/cli/claude-code-wrapper.js +0 -0
  889. /package/{agentic-flow/dist → dist}/cli/federation-cli.js +0 -0
  890. /package/{agentic-flow/dist → dist}/cli/mcp-manager.js +0 -0
  891. /package/{agentic-flow/dist → dist}/cli/mcp.js +0 -0
  892. /package/{agentic-flow/dist → dist}/cli/skills-manager.js +0 -0
  893. /package/{agentic-flow/dist → dist}/cli/update-message.js +0 -0
  894. /package/{agentic-flow/dist → dist}/cli-standalone-proxy.js +0 -0
  895. /package/{agentic-flow/dist → dist}/config/claudeFlow.js +0 -0
  896. /package/{agentic-flow/dist → dist}/config/quic.js +0 -0
  897. /package/{agentic-flow/dist → dist}/config/tools.js +0 -0
  898. /package/{agentic-flow/dist → dist}/examples/multi-agent-orchestration.js +0 -0
  899. /package/{agentic-flow/dist → dist}/examples/use-goal-planner.js +0 -0
  900. /package/{agentic-flow/dist → dist}/federation/EphemeralAgent.js +0 -0
  901. /package/{agentic-flow/dist → dist}/federation/FederationHub.js +0 -0
  902. /package/{agentic-flow/dist → dist}/federation/FederationHubClient.js +0 -0
  903. /package/{agentic-flow/dist → dist}/federation/FederationHubServer.js +0 -0
  904. /package/{agentic-flow/dist → dist}/federation/SecurityManager.js +0 -0
  905. /package/{agentic-flow/dist → dist}/federation/debug/agent-debug-stream.js +0 -0
  906. /package/{agentic-flow/dist → dist}/federation/debug/debug-stream.js +0 -0
  907. /package/{agentic-flow/dist → dist}/federation/index.js +0 -0
  908. /package/{agentic-flow/dist → dist}/federation/integrations/realtime-federation.js +0 -0
  909. /package/{agentic-flow/dist → dist}/federation/integrations/supabase-adapter-debug.js +0 -0
  910. /package/{agentic-flow/dist → dist}/federation/integrations/supabase-adapter.js +0 -0
  911. /package/{agentic-flow/dist → dist}/health.js +0 -0
  912. /package/{agentic-flow/dist → dist}/index.js +0 -0
  913. /package/{agentic-flow/dist → dist}/mcp/claudeFlowSdkServer.js +0 -0
  914. /package/{agentic-flow/dist → dist}/mcp/fastmcp/servers/claude-flow-sdk.js +0 -0
  915. /package/{agentic-flow/dist → dist}/mcp/fastmcp/servers/http-sse.js +0 -0
  916. /package/{agentic-flow/dist → dist}/mcp/fastmcp/servers/http-streaming-updated.js +0 -0
  917. /package/{agentic-flow/dist → dist}/mcp/fastmcp/servers/poc-stdio.js +0 -0
  918. /package/{agentic-flow/dist → dist}/mcp/fastmcp/servers/stdio-full.js +0 -0
  919. /package/{agentic-flow/dist → dist}/mcp/fastmcp/tools/agent/add-agent.js +0 -0
  920. /package/{agentic-flow/dist → dist}/mcp/fastmcp/tools/agent/add-command.js +0 -0
  921. /package/{agentic-flow/dist → dist}/mcp/fastmcp/tools/agent/execute.js +0 -0
  922. /package/{agentic-flow/dist → dist}/mcp/fastmcp/tools/agent/list.js +0 -0
  923. /package/{agentic-flow/dist → dist}/mcp/fastmcp/tools/agent/parallel.js +0 -0
  924. /package/{agentic-flow/dist → dist}/mcp/fastmcp/tools/swarm/init.js +0 -0
  925. /package/{agentic-flow/dist → dist}/mcp/fastmcp/tools/swarm/orchestrate.js +0 -0
  926. /package/{agentic-flow/dist → dist}/mcp/fastmcp/tools/swarm/spawn.js +0 -0
  927. /package/{agentic-flow/dist → dist}/mcp/fastmcp/types/index.js +0 -0
  928. /package/{agentic-flow/dist → dist}/mcp/standalone-stdio.js +0 -0
  929. /package/{agentic-flow/dist → dist}/memory/SharedMemoryPool.js +0 -0
  930. /package/{agentic-flow/dist → dist}/memory/index.js +0 -0
  931. /package/{agentic-flow/dist → dist}/proxy/anthropic-to-gemini.js +0 -0
  932. /package/{agentic-flow/dist → dist}/proxy/anthropic-to-onnx.js +0 -0
  933. /package/{agentic-flow/dist → dist}/proxy/anthropic-to-openrouter.js +0 -0
  934. /package/{agentic-flow/dist → dist}/proxy/anthropic-to-requesty.js +0 -0
  935. /package/{agentic-flow/dist → dist}/proxy/quic-proxy.js +0 -0
  936. /package/{agentic-flow/dist → dist}/proxy/tool-emulation.js +0 -0
  937. /package/{agentic-flow/dist → dist}/reasoningbank/AdvancedMemory.js +0 -0
  938. /package/{agentic-flow/dist → dist}/reasoningbank/HybridBackend.js +0 -0
  939. /package/{agentic-flow/dist → dist}/reasoningbank/agentdb-adapter.js +0 -0
  940. /package/{agentic-flow/dist → dist}/reasoningbank/backend-selector.js +0 -0
  941. /package/{agentic-flow/dist → dist}/reasoningbank/benchmark.js +0 -0
  942. /package/{agentic-flow/dist → dist}/reasoningbank/config/reasoningbank-types.js +0 -0
  943. /package/{agentic-flow/dist → dist}/reasoningbank/config/reasoningbank.yaml +0 -0
  944. /package/{agentic-flow/dist → dist}/reasoningbank/core/consolidate.js +0 -0
  945. /package/{agentic-flow/dist → dist}/reasoningbank/core/database.js +0 -0
  946. /package/{agentic-flow/dist → dist}/reasoningbank/core/distill.js +0 -0
  947. /package/{agentic-flow/dist → dist}/reasoningbank/core/judge.js +0 -0
  948. /package/{agentic-flow/dist → dist}/reasoningbank/core/matts.js +0 -0
  949. /package/{agentic-flow/dist → dist}/reasoningbank/core/memory-engine.js +0 -0
  950. /package/{agentic-flow/dist → dist}/reasoningbank/core/retrieve.js +0 -0
  951. /package/{agentic-flow/dist → dist}/reasoningbank/db/queries.js +0 -0
  952. /package/{agentic-flow/dist → dist}/reasoningbank/db/schema.js +0 -0
  953. /package/{agentic-flow/dist → dist}/reasoningbank/demo-comparison.js +0 -0
  954. /package/{agentic-flow/dist → dist}/reasoningbank/hooks/post-task.js +0 -0
  955. /package/{agentic-flow/dist → dist}/reasoningbank/hooks/pre-task.js +0 -0
  956. /package/{agentic-flow/dist → dist}/reasoningbank/index-new.js +0 -0
  957. /package/{agentic-flow/dist → dist}/reasoningbank/index.js +0 -0
  958. /package/{agentic-flow/dist → dist}/reasoningbank/prompts/distill-failure.json +0 -0
  959. /package/{agentic-flow/dist → dist}/reasoningbank/prompts/distill-success.json +0 -0
  960. /package/{agentic-flow/dist → dist}/reasoningbank/prompts/judge.json +0 -0
  961. /package/{agentic-flow/dist → dist}/reasoningbank/prompts/matts-aggregate.json +0 -0
  962. /package/{agentic-flow/dist → dist}/reasoningbank/test-integration.js +0 -0
  963. /package/{agentic-flow/dist → dist}/reasoningbank/test-retrieval.js +0 -0
  964. /package/{agentic-flow/dist → dist}/reasoningbank/test-validation.js +0 -0
  965. /package/{agentic-flow/dist → dist}/reasoningbank/types/index.js +0 -0
  966. /package/{agentic-flow/dist → dist}/reasoningbank/utils/config.js +0 -0
  967. /package/{agentic-flow/dist → dist}/reasoningbank/utils/embeddings.js +0 -0
  968. /package/{agentic-flow/dist → dist}/reasoningbank/utils/mmr.js +0 -0
  969. /package/{agentic-flow/dist → dist}/reasoningbank/utils/pii-scrubber.js +0 -0
  970. /package/{agentic-flow/dist → dist}/reasoningbank/wasm-adapter.js +0 -0
  971. /package/{agentic-flow/dist → dist}/router/model-mapping.js +0 -0
  972. /package/{agentic-flow/dist → dist}/router/providers/anthropic.js +0 -0
  973. /package/{agentic-flow/dist → dist}/router/providers/gemini.js +0 -0
  974. /package/{agentic-flow/dist → dist}/router/providers/onnx-local-optimized.js +0 -0
  975. /package/{agentic-flow/dist → dist}/router/providers/onnx-local.js +0 -0
  976. /package/{agentic-flow/dist → dist}/router/providers/onnx-phi4.js +0 -0
  977. /package/{agentic-flow/dist → dist}/router/providers/onnx.js +0 -0
  978. /package/{agentic-flow/dist → dist}/router/providers/openrouter.js +0 -0
  979. /package/{agentic-flow/dist → dist}/router/router.js +0 -0
  980. /package/{agentic-flow/dist → dist}/router/test-integration.js +0 -0
  981. /package/{agentic-flow/dist → dist}/router/test-onnx-benchmark.js +0 -0
  982. /package/{agentic-flow/dist → dist}/router/test-onnx-integration.js +0 -0
  983. /package/{agentic-flow/dist → dist}/router/test-onnx-local.js +0 -0
  984. /package/{agentic-flow/dist → dist}/router/test-onnx.js +0 -0
  985. /package/{agentic-flow/dist → dist}/router/test-openrouter.js +0 -0
  986. /package/{agentic-flow/dist → dist}/router/test-phi4.js +0 -0
  987. /package/{agentic-flow/dist → dist}/router/types.js +0 -0
  988. /package/{agentic-flow/dist → dist}/swarm/index.js +0 -0
  989. /package/{agentic-flow/dist → dist}/swarm/quic-coordinator.js +0 -0
  990. /package/{agentic-flow/dist → dist}/swarm/transport-router.js +0 -0
  991. /package/{agentic-flow/dist → dist}/transport/index.js +0 -0
  992. /package/{agentic-flow/dist → dist}/transport/quic-handshake.js +0 -0
  993. /package/{agentic-flow/dist → dist}/transport/quic.js +0 -0
  994. /package/{agentic-flow/dist → dist}/utils/agentBoosterPreprocessor.js +0 -0
  995. /package/{agentic-flow/dist → dist}/utils/agentLoader.js +0 -0
  996. /package/{agentic-flow/dist → dist}/utils/agentdb-runtime-patch.js +0 -0
  997. /package/{agentic-flow/dist → dist}/utils/agentdbCommands.js +0 -0
  998. /package/{agentic-flow/dist → dist}/utils/logger.js +0 -0
  999. /package/{agentic-flow/dist → dist}/utils/math.js +0 -0
  1000. /package/{agentic-flow/dist → dist}/utils/mcpCommands.js +0 -0
  1001. /package/{agentic-flow/dist → dist}/utils/model-downloader.js +0 -0
  1002. /package/{agentic-flow/dist → dist}/utils/modelCapabilities.js +0 -0
  1003. /package/{agentic-flow/dist → dist}/utils/modelOptimizer.js +0 -0
  1004. /package/{agentic-flow/dist → dist}/utils/reasoningbankCommands.js +0 -0
  1005. /package/{agentic-flow/dist → dist}/utils/retry.js +0 -0
  1006. /package/{agentic-flow/docs → docs}/AGENTDB_TESTING.md +0 -0
  1007. /package/{agentic-flow/docs → docs}/INTEGRATION-COMPLETE.md +0 -0
  1008. /package/{agentic-flow/docs → docs}/QUIC_FINAL_STATUS.md +0 -0
  1009. /package/{agentic-flow/docs → docs}/README_QUIC_PHASE1.md +0 -0
  1010. /package/{agentic-flow/docs → docs}/TEST-V1.7.8.Dockerfile +0 -0
  1011. /package/{agentic-flow/docs → docs}/TEST-V1.7.9-NODE20.Dockerfile +0 -0
  1012. /package/{agentic-flow/docs → docs}/TEST-V1.7.9.Dockerfile +0 -0
  1013. /package/{agentic-flow/docs → docs}/architecture/FEDERATION-DATA-LIFECYCLE.md +0 -0
  1014. /package/{agentic-flow/docs → docs}/archived/COMPLETE_VALIDATION_SUMMARY.md +0 -0
  1015. /package/{agentic-flow/docs → docs}/archived/DOCKER_MCP_VALIDATION.md +0 -0
  1016. /package/{agentic-flow/docs → docs}/archived/DOCKER_OPENROUTER_VALIDATION.md +0 -0
  1017. /package/{agentic-flow/docs → docs}/archived/FASTMCP_COMPLETE.md +0 -0
  1018. /package/{agentic-flow/docs → docs}/archived/FASTMCP_INTEGRATION_STATUS.md +0 -0
  1019. /package/{agentic-flow/docs → docs}/archived/FINAL_SDK_VALIDATION.md +0 -0
  1020. /package/{agentic-flow/docs → docs}/archived/FINAL_SYSTEM_VALIDATION.md +0 -0
  1021. /package/{agentic-flow/docs → docs}/archived/FINAL_VALIDATION_SUMMARY.md +0 -0
  1022. /package/{agentic-flow/docs → docs}/archived/FIXES-APPLIED-STATUS.md +0 -0
  1023. /package/{agentic-flow/docs → docs}/archived/FLOW-NEXUS-COMPLETE.md +0 -0
  1024. /package/{agentic-flow/docs → docs}/archived/HOTFIX_1.1.7.md +0 -0
  1025. /package/{agentic-flow/docs → docs}/archived/INTEGRATION_CONFIRMED.md +0 -0
  1026. /package/{agentic-flow/docs → docs}/archived/MCP_CLI_TOOLS_VALIDATION.md +0 -0
  1027. /package/{agentic-flow/docs → docs}/archived/MCP_INTEGRATION_SUCCESS.md +0 -0
  1028. /package/{agentic-flow/docs → docs}/archived/MCP_PROXY_VALIDATION.md +0 -0
  1029. /package/{agentic-flow/docs → docs}/archived/MODEL_VALIDATION_REPORT.md +0 -0
  1030. /package/{agentic-flow/docs → docs}/archived/ONNX_ENV_VARS.md +0 -0
  1031. /package/{agentic-flow/docs → docs}/archived/ONNX_FINAL_REPORT.md +0 -0
  1032. /package/{agentic-flow/docs → docs}/archived/ONNX_IMPLEMENTATION_COMPLETE.md +0 -0
  1033. /package/{agentic-flow/docs → docs}/archived/ONNX_IMPLEMENTATION_SUMMARY.md +0 -0
  1034. /package/{agentic-flow/docs → docs}/archived/ONNX_INTEGRATION.md +0 -0
  1035. /package/{agentic-flow/docs → docs}/archived/ONNX_OPTIMIZATION_SUMMARY.md +0 -0
  1036. /package/{agentic-flow/docs → docs}/archived/ONNX_PHI4_RESEARCH.md +0 -0
  1037. /package/{agentic-flow/docs → docs}/archived/ONNX_RUNTIME_INTEGRATION_PLAN.md +0 -0
  1038. /package/{agentic-flow/docs → docs}/archived/ONNX_SUCCESS_REPORT.md +0 -0
  1039. /package/{agentic-flow/docs → docs}/archived/ONNX_VS_CLAUDE_QUALITY.md +0 -0
  1040. /package/{agentic-flow/docs → docs}/archived/OPENROUTER-FIX-VALIDATION.md +0 -0
  1041. /package/{agentic-flow/docs → docs}/archived/OPENROUTER-SUCCESS-REPORT.md +0 -0
  1042. /package/{agentic-flow/docs → docs}/archived/OPENROUTER_ISSUES_AND_FIXES.md +0 -0
  1043. /package/{agentic-flow/docs → docs}/archived/OPENROUTER_PROXY_COMPLETE.md +0 -0
  1044. /package/{agentic-flow/docs → docs}/archived/OPENROUTER_VALIDATION_COMPLETE.md +0 -0
  1045. /package/{agentic-flow/docs → docs}/archived/OPTIMIZATION_SUMMARY.md +0 -0
  1046. /package/{agentic-flow/docs → docs}/archived/PACKAGE-COMPLETE.md +0 -0
  1047. /package/{agentic-flow/docs → docs}/archived/PHI4_HYPEROPTIMIZATION_PLAN.md +0 -0
  1048. /package/{agentic-flow/docs → docs}/archived/PROVIDER_INSTRUCTION_OPTIMIZATION.md +0 -0
  1049. /package/{agentic-flow/docs → docs}/archived/PROXY_VALIDATION.md +0 -0
  1050. /package/{agentic-flow/docs → docs}/archived/README.md +0 -0
  1051. /package/{agentic-flow/docs → docs}/archived/README_SDK_VALIDATION.md +0 -0
  1052. /package/{agentic-flow/docs → docs}/archived/README_V1.1.11.md +0 -0
  1053. /package/{agentic-flow/docs → docs}/archived/RELEASE-NOTES-v1.1.13.md +0 -0
  1054. /package/{agentic-flow/docs → docs}/archived/RELEASE-SUMMARY-v1.1.14-beta.1.md +0 -0
  1055. /package/{agentic-flow/docs → docs}/archived/RESEARCH_COMPLETE.txt +0 -0
  1056. /package/{agentic-flow/docs → docs}/archived/ROUTER_VALIDATION.md +0 -0
  1057. /package/{agentic-flow/docs → docs}/archived/SDK-SETUP-COMPLETE.md +0 -0
  1058. /package/{agentic-flow/docs → docs}/archived/SDK_INTEGRATION_COMPLETE.md +0 -0
  1059. /package/{agentic-flow/docs → docs}/archived/TOOL_INSTRUCTION_ENHANCEMENT.md +0 -0
  1060. /package/{agentic-flow/docs → docs}/archived/V1.1.10_VALIDATION.md +0 -0
  1061. /package/{agentic-flow/docs → docs}/archived/V1.1.11_COMPLETE_VALIDATION.md +0 -0
  1062. /package/{agentic-flow/docs → docs}/archived/V1.1.11_MCP_PROXY_FIX.md +0 -0
  1063. /package/{agentic-flow/docs → docs}/archived/V1.1.14-BETA-READY.md +0 -0
  1064. /package/{agentic-flow/docs → docs}/archived/VALIDATION-RESULTS.md +0 -0
  1065. /package/{agentic-flow/docs → docs}/archived/VALIDATION_COMPLETE.md +0 -0
  1066. /package/{agentic-flow/docs → docs}/archived/VALIDATION_SUMMARY.md +0 -0
  1067. /package/{agentic-flow/docs → docs}/archived/claude-flow-integration.md +0 -0
  1068. /package/{agentic-flow/docs → docs}/archived/docker-cli-validation.md +0 -0
  1069. /package/{agentic-flow/docs → docs}/archived/docker-memory-coordination-status.md +0 -0
  1070. /package/{agentic-flow/docs → docs}/archived/mcp-validation-summary.md +0 -0
  1071. /package/{agentic-flow/docs → docs}/archived/quick-wins-validation.md +0 -0
  1072. /package/{agentic-flow/docs → docs}/benchmarks/optimization-guide.md +0 -0
  1073. /package/{agentic-flow/docs → docs}/benchmarks/quic-results.md +0 -0
  1074. /package/{agentic-flow/docs → docs}/federation/AGENT-DEBUG-STREAMING.md +0 -0
  1075. /package/{agentic-flow/docs → docs}/federation/DEBUG-STREAMING-COMPLETE.md +0 -0
  1076. /package/{agentic-flow/docs → docs}/federation/DEBUG-STREAMING.md +0 -0
  1077. /package/{agentic-flow/docs → docs}/federation/DEPLOYMENT-VALIDATION-SUCCESS.md +0 -0
  1078. /package/{agentic-flow/docs → docs}/federation/DOCKER-FEDERATION-DEEP-REVIEW.md +0 -0
  1079. /package/{agentic-flow/docs → docs}/integration-docs/AGENT-BOOSTER-INTEGRATION.md +0 -0
  1080. /package/{agentic-flow/docs → docs}/integration-docs/CLAUDE-FLOW-INTEGRATION-ANALYSIS.md +0 -0
  1081. /package/{agentic-flow/docs → docs}/integration-docs/CLI-INTEGRATION-COMPLETE.md +0 -0
  1082. /package/{agentic-flow/docs → docs}/integration-docs/IMPLEMENTATION_SUMMARY.md +0 -0
  1083. /package/{agentic-flow/docs → docs}/integration-docs/INTEGRATION-QUICK-SUMMARY.md +0 -0
  1084. /package/{agentic-flow/docs → docs}/integration-docs/INTEGRATION-STATUS-CORRECTED.md +0 -0
  1085. /package/{agentic-flow/docs → docs}/integration-docs/INTEGRATION_COMPLETE_SUMMARY.md +0 -0
  1086. /package/{agentic-flow/docs → docs}/integration-docs/QUIC-WASM-INTEGRATION.md +0 -0
  1087. /package/{agentic-flow/docs → docs}/integration-docs/README.md +0 -0
  1088. /package/{agentic-flow/docs → docs}/integration-docs/WASM_ESM_FIX.md +0 -0
  1089. /package/{agentic-flow/docs → docs}/integration-docs/WASM_INTEGRATION_COMPLETE.md +0 -0
  1090. /package/{agentic-flow/docs → docs}/integrations/CLAUDE_AGENTS_INTEGRATION.md +0 -0
  1091. /package/{agentic-flow/docs → docs}/integrations/CLAUDE_FLOW_INTEGRATION.md +0 -0
  1092. /package/{agentic-flow/docs → docs}/integrations/FASTMCP_CLI_INTEGRATION.md +0 -0
  1093. /package/{agentic-flow/docs → docs}/integrations/FLOW-NEXUS-INTEGRATION.md +0 -0
  1094. /package/{agentic-flow/docs → docs}/integrations/README.md +0 -0
  1095. /package/{agentic-flow/docs → docs}/integrations/fastmcp-implementation-plan.md +0 -0
  1096. /package/{agentic-flow/docs → docs}/integrations/fastmcp-poc-integration.md +0 -0
  1097. /package/{agentic-flow/docs → docs}/issues/ISSUE-SUPABASE-INTEGRATION.md +0 -0
  1098. /package/{agentic-flow/docs → docs}/mcp-validation/IMPLEMENTATION-SUMMARY.md +0 -0
  1099. /package/{agentic-flow/docs → docs}/mcp-validation/MCP-CLI-VALIDATION-REPORT.md +0 -0
  1100. /package/{agentic-flow/docs → docs}/mcp-validation/README.md +0 -0
  1101. /package/{agentic-flow/docs → docs}/mcp-validation/strange-loops-test.md +0 -0
  1102. /package/{agentic-flow/docs → docs}/plans/QUIC/BUILD_INSTRUCTIONS.md +0 -0
  1103. /package/{agentic-flow/docs → docs}/plans/QUIC/IMPLEMENTATION_STATUS.md +0 -0
  1104. /package/{agentic-flow/docs → docs}/plans/QUIC/QUIC-INTEGRATION-SUMMARY.md +0 -0
  1105. /package/{agentic-flow/docs → docs}/plans/QUIC/QUIC-INTEGRATION.md +0 -0
  1106. /package/{agentic-flow/docs → docs}/plans/QUIC/QUIC-README.md +0 -0
  1107. /package/{agentic-flow/docs → docs}/plans/QUIC/QUIC_IMPLEMENTATION_SUMMARY.md +0 -0
  1108. /package/{agentic-flow/docs → docs}/plans/QUIC/README-CONDENSED.md +0 -0
  1109. /package/{agentic-flow/docs → docs}/plans/QUIC/quic-research.md +0 -0
  1110. /package/{agentic-flow/docs → docs}/plans/QUIC/quic-tutorial.md +0 -0
  1111. /package/{agentic-flow/docs → docs}/plans/agent-booster/00-INDEX.md +0 -0
  1112. /package/{agentic-flow/docs → docs}/plans/agent-booster/00-OVERVIEW.md +0 -0
  1113. /package/{agentic-flow/docs → docs}/plans/agent-booster/01-ARCHITECTURE.md +0 -0
  1114. /package/{agentic-flow/docs → docs}/plans/agent-booster/02-INTEGRATION.md +0 -0
  1115. /package/{agentic-flow/docs → docs}/plans/agent-booster/03-BENCHMARKS.md +0 -0
  1116. /package/{agentic-flow/docs → docs}/plans/agent-booster/04-NPM-SDK.md +0 -0
  1117. /package/{agentic-flow/docs → docs}/plans/agent-booster/GITHUB-ISSUE.md +0 -0
  1118. /package/{agentic-flow/docs → docs}/plans/agent-booster/README.md +0 -0
  1119. /package/{agentic-flow/docs → docs}/plans/agent-booster-cli-integration.md +0 -0
  1120. /package/{agentic-flow/docs → docs}/plans/requesty/00-overview.md +0 -0
  1121. /package/{agentic-flow/docs → docs}/plans/requesty/01-api-research.md +0 -0
  1122. /package/{agentic-flow/docs → docs}/plans/requesty/02-architecture.md +0 -0
  1123. /package/{agentic-flow/docs → docs}/plans/requesty/03-implementation-phases.md +0 -0
  1124. /package/{agentic-flow/docs → docs}/plans/requesty/04-testing-strategy.md +0 -0
  1125. /package/{agentic-flow/docs → docs}/plans/requesty/05-migration-guide.md +0 -0
  1126. /package/{agentic-flow/docs → docs}/plans/requesty/README.md +0 -0
  1127. /package/{agentic-flow/docs → docs}/quantum-goap/DEPENDENCY_GRAPH.mermaid +0 -0
  1128. /package/{agentic-flow/docs → docs}/quantum-goap/EXECUTION_SUMMARY.md +0 -0
  1129. /package/{agentic-flow/docs → docs}/quantum-goap/GOAP_IMPLEMENTATION_PLAN.md +0 -0
  1130. /package/{agentic-flow/docs → docs}/quantum-goap/QUICK_START.md +0 -0
  1131. /package/{agentic-flow/docs → docs}/quantum-research/QUANTUM_RESEARCH_LITERATURE_REVIEW.md +0 -0
  1132. /package/{agentic-flow/docs → docs}/quantum-research/README.md +0 -0
  1133. /package/{agentic-flow/docs → docs}/quic/FINAL-VALIDATION.md +0 -0
  1134. /package/{agentic-flow/docs → docs}/quic/IMPLEMENTATION-COMPLETE-SUMMARY.md +0 -0
  1135. /package/{agentic-flow/docs → docs}/quic/PERFORMANCE-VALIDATION.md +0 -0
  1136. /package/{agentic-flow/docs → docs}/quic/QUIC-STATUS-OLD.md +0 -0
  1137. /package/{agentic-flow/docs → docs}/quic/QUIC-STATUS.md +0 -0
  1138. /package/{agentic-flow/docs → docs}/quic/QUIC-VALIDATION-REPORT.md +0 -0
  1139. /package/{agentic-flow/docs → docs}/quic/WASM-INTEGRATION-COMPLETE.md +0 -0
  1140. /package/{agentic-flow/docs → docs}/reasoningbank/MEMORY_VALIDATION_REPORT.md +0 -0
  1141. /package/{agentic-flow/docs → docs}/reasoningbank/README.md +0 -0
  1142. /package/{agentic-flow/docs → docs}/reasoningbank/REASONING-AGENTS.md +0 -0
  1143. /package/{agentic-flow/docs → docs}/reasoningbank/REASONINGBANK-BENCHMARK-RESULTS.md +0 -0
  1144. /package/{agentic-flow/docs → docs}/reasoningbank/REASONINGBANK-BENCHMARK.md +0 -0
  1145. /package/{agentic-flow/docs → docs}/reasoningbank/REASONINGBANK-CLI-INTEGRATION.md +0 -0
  1146. /package/{agentic-flow/docs → docs}/reasoningbank/REASONINGBANK-DEMO.md +0 -0
  1147. /package/{agentic-flow/docs → docs}/reasoningbank/REASONINGBANK-VALIDATION.md +0 -0
  1148. /package/{agentic-flow/docs → docs}/reasoningbank/REASONINGBANK_ARCHITECTURE.md +0 -0
  1149. /package/{agentic-flow/docs → docs}/reasoningbank/REASONINGBANK_BACKENDS.md +0 -0
  1150. /package/{agentic-flow/docs → docs}/reasoningbank/REASONINGBANK_FIXES.md +0 -0
  1151. /package/{agentic-flow/docs → docs}/reasoningbank/REASONINGBANK_IMPLEMENTATION_STATUS.md +0 -0
  1152. /package/{agentic-flow/docs → docs}/reasoningbank/REASONINGBANK_INTEGRATION_PLAN.md +0 -0
  1153. /package/{agentic-flow/docs → docs}/reasoningbank/REASONINGBANK_INVESTIGATION.md +0 -0
  1154. /package/{agentic-flow/docs → docs}/releases/GITHUB-ISSUE-ADDENDUM-v1.4.6.md +0 -0
  1155. /package/{agentic-flow/docs → docs}/releases/GITHUB-ISSUE-REASONINGBANK-BENCHMARK.md +0 -0
  1156. /package/{agentic-flow/docs → docs}/releases/GITHUB-ISSUE-v1.4.6.md +0 -0
  1157. /package/{agentic-flow/docs → docs}/releases/GITHUB-ISSUE-v1.5.0.md +0 -0
  1158. /package/{agentic-flow/docs → docs}/releases/HOTFIX-v1.2.1.md +0 -0
  1159. /package/{agentic-flow/docs → docs}/releases/NPM-PUBLISH-GUIDE-v1.2.0.md +0 -0
  1160. /package/{agentic-flow/docs → docs}/releases/PUBLISH-COMPLETE-v1.2.0.md +0 -0
  1161. /package/{agentic-flow/docs → docs}/releases/README.md +0 -0
  1162. /package/{agentic-flow/docs → docs}/releases/RELEASE-v1.2.0.md +0 -0
  1163. /package/{agentic-flow/docs → docs}/releases/RELEASE-v1.8.13.md +0 -0
  1164. /package/{agentic-flow/docs → docs}/releases/v1.4.6-reasoningbank-release.md +0 -0
  1165. /package/{agentic-flow/docs → docs}/releases/v1.4.7-bugfix.md +0 -0
  1166. /package/{agentic-flow/docs → docs}/releases/v1.5.14-QUIC-TRANSPORT.md +0 -0
  1167. /package/{agentic-flow/docs → docs}/router/README.md +0 -0
  1168. /package/{agentic-flow/docs → docs}/router/ROUTER_CONFIG_REFERENCE.md +0 -0
  1169. /package/{agentic-flow/docs → docs}/router/ROUTER_USER_GUIDE.md +0 -0
  1170. /package/{agentic-flow/docs → docs}/router/TOP20_MODELS_MATRIX.md +0 -0
  1171. /package/{agentic-flow/docs → docs}/supabase/IMPLEMENTATION-SUMMARY.md +0 -0
  1172. /package/{agentic-flow/docs → docs}/supabase/INDEX.md +0 -0
  1173. /package/{agentic-flow/docs → docs}/supabase/QUICKSTART.md +0 -0
  1174. /package/{agentic-flow/docs → docs}/supabase/README.md +0 -0
  1175. /package/{agentic-flow/docs → docs}/supabase/SUPABASE-REALTIME-FEDERATION.md +0 -0
  1176. /package/{agentic-flow/docs → docs}/supabase/TEST-REPORT.md +0 -0
  1177. /package/{agentic-flow/docs → docs}/supabase/migrations/001_create_federation_tables.sql +0 -0
  1178. /package/{agentic-flow/docs → docs}/testing/AGENT-SYSTEM-VALIDATION.md +0 -0
  1179. /package/{agentic-flow/docs → docs}/testing/FINAL-TESTING-SUMMARY.md +0 -0
  1180. /package/{agentic-flow/docs → docs}/testing/README.md +0 -0
  1181. /package/{agentic-flow/docs → docs}/testing/REGRESSION-TEST-RESULTS.md +0 -0
  1182. /package/{agentic-flow/docs → docs}/testing/STREAMING-AND-MCP-VALIDATION.md +0 -0
  1183. /package/{agentic-flow/docs → docs}/v1.7.1-QUICK-START.md +0 -0
  1184. /package/{agentic-flow/docs → docs}/validation/README.md +0 -0
  1185. /package/{agentic-flow/docs → docs}/validation/reports/REGRESSION-TEST-V1.8.11.md +0 -0
  1186. /package/{agentic-flow/docs → docs}/validation-reports/BENCHMARK_AND_OPTIMIZATION_REPORT.md +0 -0
  1187. /package/{agentic-flow/docs → docs}/validation-reports/DOCKER_VALIDATION_RESULTS.md +0 -0
  1188. /package/{agentic-flow/docs → docs}/validation-reports/NO_REGRESSIONS_CONFIRMED.md +0 -0
  1189. /package/{agentic-flow/docs → docs}/validation-reports/NPM-PACKAGE-ANALYSIS-FINAL.md +0 -0
  1190. /package/{agentic-flow/docs → docs}/validation-reports/README.md +0 -0
  1191. /package/{agentic-flow/docs → docs}/validation-reports/V2.7.0-ALPHA.10_FINAL_VALIDATION.md +0 -0
  1192. /package/{agentic-flow/docs → docs}/validation-reports/V2.7.0-ALPHA.9_VALIDATION.md +0 -0
  1193. /package/{agentic-flow/docs → docs}/validation-reports/v1.6.0-QUIC-CLI-VALIDATION.md +0 -0
  1194. /package/{agentic-flow/docs → docs}/validation-reports/v1.6.1-NPM-PUBLISH-VALIDATION.md +0 -0
  1195. /package/{agentic-flow/docs → docs}/version-releases/PUBLICATION_REPORT_v1.5.11.md +0 -0
  1196. /package/{agentic-flow/docs → docs}/version-releases/README.md +0 -0
  1197. /package/{agentic-flow/docs → docs}/version-releases/v1.5.9-DOCKER-VERIFICATION.md +0 -0
  1198. /package/{agentic-flow/docs → docs}/version-releases/v1.5.9-RELEASE-SUMMARY.md +0 -0
  1199. /package/{agentic-flow/scripts → scripts}/build.sh +0 -0
  1200. /package/{agentic-flow/scripts → scripts}/claude-code +0 -0
  1201. /package/{agentic-flow/scripts → scripts}/claude-flow +0 -0
  1202. /package/{agentic-flow/scripts → scripts}/claude-flow.bat +0 -0
  1203. /package/{agentic-flow/scripts → scripts}/claude-flow.ps1 +0 -0
  1204. /package/{agentic-flow/scripts → scripts}/postinstall.js +0 -0
  1205. /package/{agentic-flow/scripts → scripts}/run-validation.sh +0 -0
  1206. /package/{agentic-flow/scripts → scripts}/test-agentdb.sh +0 -0
  1207. /package/{agentic-flow/scripts → scripts}/test-all-commands.sh +0 -0
  1208. /package/{agentic-flow/scripts → scripts}/test-claude-flow-sdk.sh +0 -0
  1209. /package/{agentic-flow/scripts → scripts}/test-fastmcp-docker.sh +0 -0
  1210. /package/{agentic-flow/scripts → scripts}/test-fastmcp-poc.sh +0 -0
  1211. /package/{agentic-flow/scripts → scripts}/test-functionality.sh +0 -0
  1212. /package/{agentic-flow/scripts → scripts}/test-onnx-docker.sh +0 -0
  1213. /package/{agentic-flow/scripts → scripts}/test-router-docker.sh +0 -0
  1214. /package/{agentic-flow/scripts → scripts}/validate-mcp-cli-tools.sh +0 -0
  1215. /package/{agentic-flow/scripts → scripts}/validate-providers.sh +0 -0
  1216. /package/{agentic-flow/wasm → wasm}/quic/README.md +0 -0
  1217. /package/{agentic-flow/wasm → wasm}/quic/agentic_flow_quic.js +0 -0
  1218. /package/{agentic-flow/wasm → wasm}/quic/agentic_flow_quic_bg.wasm +0 -0
  1219. /package/{agentic-flow/wasm → wasm}/quic/package.json +0 -0
  1220. /package/{agentic-flow/wasm → wasm}/reasoningbank/package.json +0 -0
  1221. /package/{agentic-flow/wasm → wasm}/reasoningbank/reasoningbank_wasm.js +0 -0
  1222. /package/{agentic-flow/wasm → wasm}/reasoningbank/reasoningbank_wasm_bg.js +0 -0
  1223. /package/{agentic-flow/wasm → wasm}/reasoningbank/reasoningbank_wasm_bg.wasm +0 -0
@@ -1,63 +0,0 @@
1
- ---
2
- name: raft-manager
3
- type: coordinator
4
- color: "#2196F3"
5
- description: Manages Raft consensus algorithm with leader election and log replication
6
- capabilities:
7
- - leader_election
8
- - log_replication
9
- - follower_management
10
- - membership_changes
11
- - consistency_verification
12
- priority: high
13
- hooks:
14
- pre: |
15
- echo "🗳️ Raft Manager starting: $TASK"
16
- # Check cluster health before operations
17
- if [[ "$TASK" == *"election"* ]]; then
18
- echo "🎯 Preparing leader election process"
19
- fi
20
- post: |
21
- echo "📝 Raft operation complete"
22
- # Verify log consistency
23
- echo "🔍 Validating log replication and consistency"
24
- ---
25
-
26
- # Raft Consensus Manager
27
-
28
- Implements and manages the Raft consensus algorithm for distributed systems with strong consistency guarantees.
29
-
30
- ## Core Responsibilities
31
-
32
- 1. **Leader Election**: Coordinate randomized timeout-based leader selection
33
- 2. **Log Replication**: Ensure reliable propagation of entries to followers
34
- 3. **Consistency Management**: Maintain log consistency across all cluster nodes
35
- 4. **Membership Changes**: Handle dynamic node addition/removal safely
36
- 5. **Recovery Coordination**: Resynchronize nodes after network partitions
37
-
38
- ## Implementation Approach
39
-
40
- ### Leader Election Protocol
41
- - Execute randomized timeout-based elections to prevent split votes
42
- - Manage candidate state transitions and vote collection
43
- - Maintain leadership through periodic heartbeat messages
44
- - Handle split vote scenarios with intelligent backoff
45
-
46
- ### Log Replication System
47
- - Implement append entries protocol for reliable log propagation
48
- - Ensure log consistency guarantees across all follower nodes
49
- - Track commit index and apply entries to state machine
50
- - Execute log compaction through snapshotting mechanisms
51
-
52
- ### Fault Tolerance Features
53
- - Detect leader failures and trigger new elections
54
- - Handle network partitions while maintaining consistency
55
- - Recover failed nodes to consistent state automatically
56
- - Support dynamic cluster membership changes safely
57
-
58
- ## Collaboration
59
-
60
- - Coordinate with Quorum Manager for membership adjustments
61
- - Interface with Performance Benchmarker for optimization analysis
62
- - Integrate with CRDT Synchronizer for eventual consistency scenarios
63
- - Synchronize with Security Manager for secure communication
@@ -1,622 +0,0 @@
1
- ---
2
- name: security-manager
3
- type: security
4
- color: "#F44336"
5
- description: Implements comprehensive security mechanisms for distributed consensus protocols
6
- capabilities:
7
- - cryptographic_security
8
- - attack_detection
9
- - key_management
10
- - secure_communication
11
- - threat_mitigation
12
- priority: critical
13
- hooks:
14
- pre: |
15
- echo "🔐 Security Manager securing: $TASK"
16
- # Initialize security protocols
17
- if [[ "$TASK" == *"consensus"* ]]; then
18
- echo "🛡️ Activating cryptographic verification"
19
- fi
20
- post: |
21
- echo "✅ Security protocols verified"
22
- # Run security audit
23
- echo "🔍 Conducting post-operation security audit"
24
- ---
25
-
26
- # Consensus Security Manager
27
-
28
- Implements comprehensive security mechanisms for distributed consensus protocols with advanced threat detection.
29
-
30
- ## Core Responsibilities
31
-
32
- 1. **Cryptographic Infrastructure**: Deploy threshold cryptography and zero-knowledge proofs
33
- 2. **Attack Detection**: Identify Byzantine, Sybil, Eclipse, and DoS attacks
34
- 3. **Key Management**: Handle distributed key generation and rotation protocols
35
- 4. **Secure Communications**: Ensure TLS 1.3 encryption and message authentication
36
- 5. **Threat Mitigation**: Implement real-time security countermeasures
37
-
38
- ## Technical Implementation
39
-
40
- ### Threshold Signature System
41
- ```javascript
42
- class ThresholdSignatureSystem {
43
- constructor(threshold, totalParties, curveType = 'secp256k1') {
44
- this.t = threshold; // Minimum signatures required
45
- this.n = totalParties; // Total number of parties
46
- this.curve = this.initializeCurve(curveType);
47
- this.masterPublicKey = null;
48
- this.privateKeyShares = new Map();
49
- this.publicKeyShares = new Map();
50
- this.polynomial = null;
51
- }
52
-
53
- // Distributed Key Generation (DKG) Protocol
54
- async generateDistributedKeys() {
55
- // Phase 1: Each party generates secret polynomial
56
- const secretPolynomial = this.generateSecretPolynomial();
57
- const commitments = this.generateCommitments(secretPolynomial);
58
-
59
- // Phase 2: Broadcast commitments
60
- await this.broadcastCommitments(commitments);
61
-
62
- // Phase 3: Share secret values
63
- const secretShares = this.generateSecretShares(secretPolynomial);
64
- await this.distributeSecretShares(secretShares);
65
-
66
- // Phase 4: Verify received shares
67
- const validShares = await this.verifyReceivedShares();
68
-
69
- // Phase 5: Combine to create master keys
70
- this.masterPublicKey = this.combineMasterPublicKey(validShares);
71
-
72
- return {
73
- masterPublicKey: this.masterPublicKey,
74
- privateKeyShare: this.privateKeyShares.get(this.nodeId),
75
- publicKeyShares: this.publicKeyShares
76
- };
77
- }
78
-
79
- // Threshold Signature Creation
80
- async createThresholdSignature(message, signatories) {
81
- if (signatories.length < this.t) {
82
- throw new Error('Insufficient signatories for threshold');
83
- }
84
-
85
- const partialSignatures = [];
86
-
87
- // Each signatory creates partial signature
88
- for (const signatory of signatories) {
89
- const partialSig = await this.createPartialSignature(message, signatory);
90
- partialSignatures.push({
91
- signatory: signatory,
92
- signature: partialSig,
93
- publicKeyShare: this.publicKeyShares.get(signatory)
94
- });
95
- }
96
-
97
- // Verify partial signatures
98
- const validPartials = partialSignatures.filter(ps =>
99
- this.verifyPartialSignature(message, ps.signature, ps.publicKeyShare)
100
- );
101
-
102
- if (validPartials.length < this.t) {
103
- throw new Error('Insufficient valid partial signatures');
104
- }
105
-
106
- // Combine partial signatures using Lagrange interpolation
107
- return this.combinePartialSignatures(message, validPartials.slice(0, this.t));
108
- }
109
-
110
- // Signature Verification
111
- verifyThresholdSignature(message, signature) {
112
- return this.curve.verify(message, signature, this.masterPublicKey);
113
- }
114
-
115
- // Lagrange Interpolation for Signature Combination
116
- combinePartialSignatures(message, partialSignatures) {
117
- const lambda = this.computeLagrangeCoefficients(
118
- partialSignatures.map(ps => ps.signatory)
119
- );
120
-
121
- let combinedSignature = this.curve.infinity();
122
-
123
- for (let i = 0; i < partialSignatures.length; i++) {
124
- const weighted = this.curve.multiply(
125
- partialSignatures[i].signature,
126
- lambda[i]
127
- );
128
- combinedSignature = this.curve.add(combinedSignature, weighted);
129
- }
130
-
131
- return combinedSignature;
132
- }
133
- }
134
- ```
135
-
136
- ### Zero-Knowledge Proof System
137
- ```javascript
138
- class ZeroKnowledgeProofSystem {
139
- constructor() {
140
- this.curve = new EllipticCurve('secp256k1');
141
- this.hashFunction = 'sha256';
142
- this.proofCache = new Map();
143
- }
144
-
145
- // Prove knowledge of discrete logarithm (Schnorr proof)
146
- async proveDiscreteLog(secret, publicKey, challenge = null) {
147
- // Generate random nonce
148
- const nonce = this.generateSecureRandom();
149
- const commitment = this.curve.multiply(this.curve.generator, nonce);
150
-
151
- // Use provided challenge or generate Fiat-Shamir challenge
152
- const c = challenge || this.generateChallenge(commitment, publicKey);
153
-
154
- // Compute response
155
- const response = (nonce + c * secret) % this.curve.order;
156
-
157
- return {
158
- commitment: commitment,
159
- challenge: c,
160
- response: response
161
- };
162
- }
163
-
164
- // Verify discrete logarithm proof
165
- verifyDiscreteLogProof(proof, publicKey) {
166
- const { commitment, challenge, response } = proof;
167
-
168
- // Verify: g^response = commitment * publicKey^challenge
169
- const leftSide = this.curve.multiply(this.curve.generator, response);
170
- const rightSide = this.curve.add(
171
- commitment,
172
- this.curve.multiply(publicKey, challenge)
173
- );
174
-
175
- return this.curve.equals(leftSide, rightSide);
176
- }
177
-
178
- // Range proof for committed values
179
- async proveRange(value, commitment, min, max) {
180
- if (value < min || value > max) {
181
- throw new Error('Value outside specified range');
182
- }
183
-
184
- const bitLength = Math.ceil(Math.log2(max - min + 1));
185
- const bits = this.valueToBits(value - min, bitLength);
186
-
187
- const proofs = [];
188
- let currentCommitment = commitment;
189
-
190
- // Create proof for each bit
191
- for (let i = 0; i < bitLength; i++) {
192
- const bitProof = await this.proveBit(bits[i], currentCommitment);
193
- proofs.push(bitProof);
194
-
195
- // Update commitment for next bit
196
- currentCommitment = this.updateCommitmentForNextBit(currentCommitment, bits[i]);
197
- }
198
-
199
- return {
200
- bitProofs: proofs,
201
- range: { min, max },
202
- bitLength: bitLength
203
- };
204
- }
205
-
206
- // Bulletproof implementation for range proofs
207
- async createBulletproof(value, commitment, range) {
208
- const n = Math.ceil(Math.log2(range));
209
- const generators = this.generateBulletproofGenerators(n);
210
-
211
- // Inner product argument
212
- const innerProductProof = await this.createInnerProductProof(
213
- value, commitment, generators
214
- );
215
-
216
- return {
217
- type: 'bulletproof',
218
- commitment: commitment,
219
- proof: innerProductProof,
220
- generators: generators,
221
- range: range
222
- };
223
- }
224
- }
225
- ```
226
-
227
- ### Attack Detection System
228
- ```javascript
229
- class ConsensusSecurityMonitor {
230
- constructor() {
231
- this.attackDetectors = new Map();
232
- this.behaviorAnalyzer = new BehaviorAnalyzer();
233
- this.reputationSystem = new ReputationSystem();
234
- this.alertSystem = new SecurityAlertSystem();
235
- this.forensicLogger = new ForensicLogger();
236
- }
237
-
238
- // Byzantine Attack Detection
239
- async detectByzantineAttacks(consensusRound) {
240
- const participants = consensusRound.participants;
241
- const messages = consensusRound.messages;
242
-
243
- const anomalies = [];
244
-
245
- // Detect contradictory messages from same node
246
- const contradictions = this.detectContradictoryMessages(messages);
247
- if (contradictions.length > 0) {
248
- anomalies.push({
249
- type: 'CONTRADICTORY_MESSAGES',
250
- severity: 'HIGH',
251
- details: contradictions
252
- });
253
- }
254
-
255
- // Detect timing-based attacks
256
- const timingAnomalies = this.detectTimingAnomalies(messages);
257
- if (timingAnomalies.length > 0) {
258
- anomalies.push({
259
- type: 'TIMING_ATTACK',
260
- severity: 'MEDIUM',
261
- details: timingAnomalies
262
- });
263
- }
264
-
265
- // Detect collusion patterns
266
- const collusionPatterns = await this.detectCollusion(participants, messages);
267
- if (collusionPatterns.length > 0) {
268
- anomalies.push({
269
- type: 'COLLUSION_DETECTED',
270
- severity: 'HIGH',
271
- details: collusionPatterns
272
- });
273
- }
274
-
275
- // Update reputation scores
276
- for (const participant of participants) {
277
- await this.reputationSystem.updateReputation(
278
- participant,
279
- anomalies.filter(a => a.details.includes(participant))
280
- );
281
- }
282
-
283
- return anomalies;
284
- }
285
-
286
- // Sybil Attack Prevention
287
- async preventSybilAttacks(nodeJoinRequest) {
288
- const identityVerifiers = [
289
- this.verifyProofOfWork(nodeJoinRequest),
290
- this.verifyStakeProof(nodeJoinRequest),
291
- this.verifyIdentityCredentials(nodeJoinRequest),
292
- this.checkReputationHistory(nodeJoinRequest)
293
- ];
294
-
295
- const verificationResults = await Promise.all(identityVerifiers);
296
- const passedVerifications = verificationResults.filter(r => r.valid);
297
-
298
- // Require multiple verification methods
299
- const requiredVerifications = 2;
300
- if (passedVerifications.length < requiredVerifications) {
301
- throw new SecurityError('Insufficient identity verification for node join');
302
- }
303
-
304
- // Additional checks for suspicious patterns
305
- const suspiciousPatterns = await this.detectSybilPatterns(nodeJoinRequest);
306
- if (suspiciousPatterns.length > 0) {
307
- await this.alertSystem.raiseSybilAlert(nodeJoinRequest, suspiciousPatterns);
308
- throw new SecurityError('Potential Sybil attack detected');
309
- }
310
-
311
- return true;
312
- }
313
-
314
- // Eclipse Attack Protection
315
- async protectAgainstEclipseAttacks(nodeId, connectionRequests) {
316
- const diversityMetrics = this.analyzePeerDiversity(connectionRequests);
317
-
318
- // Check for geographic diversity
319
- if (diversityMetrics.geographicEntropy < 2.0) {
320
- await this.enforceGeographicDiversity(nodeId, connectionRequests);
321
- }
322
-
323
- // Check for network diversity (ASNs)
324
- if (diversityMetrics.networkEntropy < 1.5) {
325
- await this.enforceNetworkDiversity(nodeId, connectionRequests);
326
- }
327
-
328
- // Limit connections from single source
329
- const maxConnectionsPerSource = 3;
330
- const groupedConnections = this.groupConnectionsBySource(connectionRequests);
331
-
332
- for (const [source, connections] of groupedConnections) {
333
- if (connections.length > maxConnectionsPerSource) {
334
- await this.alertSystem.raiseEclipseAlert(nodeId, source, connections);
335
- // Randomly select subset of connections
336
- const allowedConnections = this.randomlySelectConnections(
337
- connections, maxConnectionsPerSource
338
- );
339
- this.blockExcessConnections(
340
- connections.filter(c => !allowedConnections.includes(c))
341
- );
342
- }
343
- }
344
- }
345
-
346
- // DoS Attack Mitigation
347
- async mitigateDoSAttacks(incomingRequests) {
348
- const rateLimiter = new AdaptiveRateLimiter();
349
- const requestAnalyzer = new RequestPatternAnalyzer();
350
-
351
- // Analyze request patterns for anomalies
352
- const anomalousRequests = await requestAnalyzer.detectAnomalies(incomingRequests);
353
-
354
- if (anomalousRequests.length > 0) {
355
- // Implement progressive response strategies
356
- const mitigationStrategies = [
357
- this.applyRateLimiting(anomalousRequests),
358
- this.implementPriorityQueuing(incomingRequests),
359
- this.activateCircuitBreakers(anomalousRequests),
360
- this.deployTemporaryBlacklisting(anomalousRequests)
361
- ];
362
-
363
- await Promise.all(mitigationStrategies);
364
- }
365
-
366
- return this.filterLegitimateRequests(incomingRequests, anomalousRequests);
367
- }
368
- }
369
- ```
370
-
371
- ### Secure Key Management
372
- ```javascript
373
- class SecureKeyManager {
374
- constructor() {
375
- this.keyStore = new EncryptedKeyStore();
376
- this.rotationScheduler = new KeyRotationScheduler();
377
- this.distributionProtocol = new SecureDistributionProtocol();
378
- this.backupSystem = new SecureBackupSystem();
379
- }
380
-
381
- // Distributed Key Generation
382
- async generateDistributedKey(participants, threshold) {
383
- const dkgProtocol = new DistributedKeyGeneration(threshold, participants.length);
384
-
385
- // Phase 1: Initialize DKG ceremony
386
- const ceremony = await dkgProtocol.initializeCeremony(participants);
387
-
388
- // Phase 2: Each participant contributes randomness
389
- const contributions = await this.collectContributions(participants, ceremony);
390
-
391
- // Phase 3: Verify contributions
392
- const validContributions = await this.verifyContributions(contributions);
393
-
394
- // Phase 4: Combine contributions to generate master key
395
- const masterKey = await dkgProtocol.combineMasterKey(validContributions);
396
-
397
- // Phase 5: Generate and distribute key shares
398
- const keyShares = await dkgProtocol.generateKeyShares(masterKey, participants);
399
-
400
- // Phase 6: Secure distribution of key shares
401
- await this.securelyDistributeShares(keyShares, participants);
402
-
403
- return {
404
- masterPublicKey: masterKey.publicKey,
405
- ceremony: ceremony,
406
- participants: participants
407
- };
408
- }
409
-
410
- // Key Rotation Protocol
411
- async rotateKeys(currentKeyId, participants) {
412
- // Generate new key using proactive secret sharing
413
- const newKey = await this.generateDistributedKey(participants, Math.floor(participants.length / 2) + 1);
414
-
415
- // Create transition period where both keys are valid
416
- const transitionPeriod = 24 * 60 * 60 * 1000; // 24 hours
417
- await this.scheduleKeyTransition(currentKeyId, newKey.masterPublicKey, transitionPeriod);
418
-
419
- // Notify all participants about key rotation
420
- await this.notifyKeyRotation(participants, newKey);
421
-
422
- // Gradually phase out old key
423
- setTimeout(async () => {
424
- await this.deactivateKey(currentKeyId);
425
- }, transitionPeriod);
426
-
427
- return newKey;
428
- }
429
-
430
- // Secure Key Backup and Recovery
431
- async backupKeyShares(keyShares, backupThreshold) {
432
- const backupShares = this.createBackupShares(keyShares, backupThreshold);
433
-
434
- // Encrypt backup shares with different passwords
435
- const encryptedBackups = await Promise.all(
436
- backupShares.map(async (share, index) => ({
437
- id: `backup_${index}`,
438
- encryptedShare: await this.encryptBackupShare(share, `password_${index}`),
439
- checksum: this.computeChecksum(share)
440
- }))
441
- );
442
-
443
- // Distribute backups to secure locations
444
- await this.distributeBackups(encryptedBackups);
445
-
446
- return encryptedBackups.map(backup => ({
447
- id: backup.id,
448
- checksum: backup.checksum
449
- }));
450
- }
451
-
452
- async recoverFromBackup(backupIds, passwords) {
453
- const backupShares = [];
454
-
455
- // Retrieve and decrypt backup shares
456
- for (let i = 0; i < backupIds.length; i++) {
457
- const encryptedBackup = await this.retrieveBackup(backupIds[i]);
458
- const decryptedShare = await this.decryptBackupShare(
459
- encryptedBackup.encryptedShare,
460
- passwords[i]
461
- );
462
-
463
- // Verify integrity
464
- const checksum = this.computeChecksum(decryptedShare);
465
- if (checksum !== encryptedBackup.checksum) {
466
- throw new Error(`Backup integrity check failed for ${backupIds[i]}`);
467
- }
468
-
469
- backupShares.push(decryptedShare);
470
- }
471
-
472
- // Reconstruct original key from backup shares
473
- return this.reconstructKeyFromBackup(backupShares);
474
- }
475
- }
476
- ```
477
-
478
- ## MCP Integration Hooks
479
-
480
- ### Security Monitoring Integration
481
- ```javascript
482
- // Store security metrics in memory
483
- await this.mcpTools.memory_usage({
484
- action: 'store',
485
- key: `security_metrics_${Date.now()}`,
486
- value: JSON.stringify({
487
- attacksDetected: this.attacksDetected,
488
- reputationScores: Array.from(this.reputationSystem.scores.entries()),
489
- keyRotationEvents: this.keyRotationHistory
490
- }),
491
- namespace: 'consensus_security',
492
- ttl: 86400000 // 24 hours
493
- });
494
-
495
- // Performance monitoring for security operations
496
- await this.mcpTools.metrics_collect({
497
- components: [
498
- 'signature_verification_time',
499
- 'zkp_generation_time',
500
- 'attack_detection_latency',
501
- 'key_rotation_overhead'
502
- ]
503
- });
504
- ```
505
-
506
- ### Neural Pattern Learning for Security
507
- ```javascript
508
- // Learn attack patterns
509
- await this.mcpTools.neural_patterns({
510
- action: 'learn',
511
- operation: 'attack_pattern_recognition',
512
- outcome: JSON.stringify({
513
- attackType: detectedAttack.type,
514
- patterns: detectedAttack.patterns,
515
- mitigation: appliedMitigation
516
- })
517
- });
518
-
519
- // Predict potential security threats
520
- const threatPrediction = await this.mcpTools.neural_predict({
521
- modelId: 'security_threat_model',
522
- input: JSON.stringify(currentSecurityMetrics)
523
- });
524
- ```
525
-
526
- ## Integration with Consensus Protocols
527
-
528
- ### Byzantine Consensus Security
529
- ```javascript
530
- class ByzantineConsensusSecurityWrapper {
531
- constructor(byzantineCoordinator, securityManager) {
532
- this.consensus = byzantineCoordinator;
533
- this.security = securityManager;
534
- }
535
-
536
- async secureConsensusRound(proposal) {
537
- // Pre-consensus security checks
538
- await this.security.validateProposal(proposal);
539
-
540
- // Execute consensus with security monitoring
541
- const result = await this.executeSecureConsensus(proposal);
542
-
543
- // Post-consensus security analysis
544
- await this.security.analyzeConsensusRound(result);
545
-
546
- return result;
547
- }
548
-
549
- async executeSecureConsensus(proposal) {
550
- // Sign proposal with threshold signature
551
- const signedProposal = await this.security.thresholdSignature.sign(proposal);
552
-
553
- // Monitor consensus execution for attacks
554
- const monitor = this.security.startConsensusMonitoring();
555
-
556
- try {
557
- // Execute Byzantine consensus
558
- const result = await this.consensus.initiateConsensus(signedProposal);
559
-
560
- // Verify result integrity
561
- await this.security.verifyConsensusResult(result);
562
-
563
- return result;
564
- } finally {
565
- monitor.stop();
566
- }
567
- }
568
- }
569
- ```
570
-
571
- ## Security Testing and Validation
572
-
573
- ### Penetration Testing Framework
574
- ```javascript
575
- class ConsensusPenetrationTester {
576
- constructor(securityManager) {
577
- this.security = securityManager;
578
- this.testScenarios = new Map();
579
- this.vulnerabilityDatabase = new VulnerabilityDatabase();
580
- }
581
-
582
- async runSecurityTests() {
583
- const testResults = [];
584
-
585
- // Test 1: Byzantine attack simulation
586
- testResults.push(await this.testByzantineAttack());
587
-
588
- // Test 2: Sybil attack simulation
589
- testResults.push(await this.testSybilAttack());
590
-
591
- // Test 3: Eclipse attack simulation
592
- testResults.push(await this.testEclipseAttack());
593
-
594
- // Test 4: DoS attack simulation
595
- testResults.push(await this.testDoSAttack());
596
-
597
- // Test 5: Cryptographic security tests
598
- testResults.push(await this.testCryptographicSecurity());
599
-
600
- return this.generateSecurityReport(testResults);
601
- }
602
-
603
- async testByzantineAttack() {
604
- // Simulate malicious nodes sending contradictory messages
605
- const maliciousNodes = this.createMaliciousNodes(3);
606
- const attack = new ByzantineAttackSimulator(maliciousNodes);
607
-
608
- const startTime = Date.now();
609
- const detectionTime = await this.security.detectByzantineAttacks(attack.execute());
610
- const endTime = Date.now();
611
-
612
- return {
613
- test: 'Byzantine Attack',
614
- detected: detectionTime !== null,
615
- detectionLatency: detectionTime ? endTime - startTime : null,
616
- mitigation: await this.security.mitigateByzantineAttack(attack)
617
- };
618
- }
619
- }
620
- ```
621
-
622
- This security manager provides comprehensive protection for distributed consensus protocols with enterprise-grade cryptographic security, advanced threat detection, and robust key management capabilities.