@r-universe/webr 2023.6.11 → 2023.6.21

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1649) hide show
  1. package/dist/R.bin.data +35733 -74
  2. package/dist/R.bin.js +1756 -0
  3. package/dist/R.bin.wasm +0 -0
  4. package/dist/esbuild.d.ts +1 -0
  5. package/dist/libRblas.so +0 -0
  6. package/dist/libRlapack.so +0 -0
  7. package/dist/repl/fstree.d.ts +57 -0
  8. package/dist/repl/repl.d.ts +1 -0
  9. package/dist/tests/packages/webr.test.d.ts +1 -0
  10. package/dist/tests/webR/console.test.d.ts +1 -0
  11. package/dist/tests/webR/proxy.test.d.ts +1 -0
  12. package/dist/tests/webR/robj.test.d.ts +1 -0
  13. package/dist/tests/webR/utils.test.d.ts +1 -0
  14. package/dist/tests/webR/webr-main.test.d.ts +1 -0
  15. package/dist/tests/webR/webr-r.test.d.ts +1 -0
  16. package/dist/tests/webR/webr-worker.test.d.ts +1 -0
  17. package/dist/vfs/usr/lib/R/doc/AUTHORS +39 -0
  18. package/dist/vfs/usr/lib/R/doc/BioC_mirrors.csv +17 -0
  19. package/dist/vfs/usr/lib/R/doc/COPYING +340 -0
  20. package/dist/vfs/usr/lib/R/doc/COPYRIGHTS +774 -0
  21. package/dist/vfs/usr/lib/R/doc/CRAN_mirrors.csv +105 -0
  22. package/dist/vfs/usr/lib/R/doc/FAQ +2653 -0
  23. package/dist/vfs/usr/lib/R/doc/KEYWORDS +87 -0
  24. package/dist/vfs/usr/lib/R/doc/KEYWORDS.db +71 -0
  25. package/dist/vfs/usr/lib/R/doc/NEWS +3538 -0
  26. package/dist/vfs/usr/lib/R/doc/NEWS.0 +2825 -0
  27. package/dist/vfs/usr/lib/R/doc/NEWS.1 +8108 -0
  28. package/dist/vfs/usr/lib/R/doc/NEWS.2 +16534 -0
  29. package/dist/vfs/usr/lib/R/doc/NEWS.2.rds +0 -0
  30. package/dist/vfs/usr/lib/R/doc/NEWS.3 +7840 -0
  31. package/dist/vfs/usr/lib/R/doc/NEWS.3.rds +0 -0
  32. package/dist/vfs/usr/lib/R/doc/NEWS.pdf +0 -0
  33. package/dist/vfs/usr/lib/R/doc/NEWS.rds +0 -0
  34. package/dist/vfs/usr/lib/R/doc/RESOURCES +44 -0
  35. package/dist/vfs/usr/lib/R/doc/THANKS +78 -0
  36. package/dist/vfs/usr/lib/R/doc/html/NEWS.2.html +9004 -0
  37. package/dist/vfs/usr/lib/R/doc/html/NEWS.3.html +11328 -0
  38. package/dist/vfs/usr/lib/R/doc/html/NEWS.html +5151 -0
  39. package/dist/vfs/usr/lib/R/doc/html/R.css +130 -0
  40. package/dist/vfs/usr/lib/R/doc/html/Rlogo.pdf +0 -0
  41. package/dist/vfs/usr/lib/R/doc/html/Rlogo.svg +33 -0
  42. package/dist/vfs/usr/lib/R/doc/html/Search.html +27 -0
  43. package/dist/vfs/usr/lib/R/doc/html/SearchOn.html +200 -0
  44. package/dist/vfs/usr/lib/R/doc/html/about.html +38 -0
  45. package/dist/vfs/usr/lib/R/doc/html/favicon.ico +0 -0
  46. package/dist/vfs/usr/lib/R/doc/html/index.html +79 -0
  47. package/dist/vfs/usr/lib/R/doc/html/katex/LICENSE +24 -0
  48. package/dist/vfs/usr/lib/R/doc/html/katex/README.md +119 -0
  49. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_AMS-Regular.ttf +0 -0
  50. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_AMS-Regular.woff +0 -0
  51. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_AMS-Regular.woff2 +0 -0
  52. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Caligraphic-Bold.ttf +0 -0
  53. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Caligraphic-Bold.woff +0 -0
  54. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Caligraphic-Bold.woff2 +0 -0
  55. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Caligraphic-Regular.ttf +0 -0
  56. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Caligraphic-Regular.woff +0 -0
  57. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Caligraphic-Regular.woff2 +0 -0
  58. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Fraktur-Bold.ttf +0 -0
  59. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Fraktur-Bold.woff +0 -0
  60. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Fraktur-Bold.woff2 +0 -0
  61. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Fraktur-Regular.ttf +0 -0
  62. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Fraktur-Regular.woff +0 -0
  63. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Fraktur-Regular.woff2 +0 -0
  64. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Main-Bold.ttf +0 -0
  65. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Main-Bold.woff +0 -0
  66. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Main-Bold.woff2 +0 -0
  67. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Main-BoldItalic.ttf +0 -0
  68. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Main-BoldItalic.woff +0 -0
  69. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Main-BoldItalic.woff2 +0 -0
  70. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Main-Italic.ttf +0 -0
  71. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Main-Italic.woff +0 -0
  72. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Main-Italic.woff2 +0 -0
  73. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Main-Regular.ttf +0 -0
  74. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Main-Regular.woff +0 -0
  75. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Main-Regular.woff2 +0 -0
  76. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Math-BoldItalic.ttf +0 -0
  77. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Math-BoldItalic.woff +0 -0
  78. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Math-BoldItalic.woff2 +0 -0
  79. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Math-Italic.ttf +0 -0
  80. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Math-Italic.woff +0 -0
  81. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Math-Italic.woff2 +0 -0
  82. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_SansSerif-Bold.ttf +0 -0
  83. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_SansSerif-Bold.woff +0 -0
  84. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_SansSerif-Bold.woff2 +0 -0
  85. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_SansSerif-Italic.ttf +0 -0
  86. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_SansSerif-Italic.woff +0 -0
  87. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_SansSerif-Italic.woff2 +0 -0
  88. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_SansSerif-Regular.ttf +0 -0
  89. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_SansSerif-Regular.woff +0 -0
  90. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_SansSerif-Regular.woff2 +0 -0
  91. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Script-Regular.ttf +0 -0
  92. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Script-Regular.woff +0 -0
  93. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Script-Regular.woff2 +0 -0
  94. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Size1-Regular.ttf +0 -0
  95. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Size1-Regular.woff +0 -0
  96. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Size1-Regular.woff2 +0 -0
  97. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Size2-Regular.ttf +0 -0
  98. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Size2-Regular.woff +0 -0
  99. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Size2-Regular.woff2 +0 -0
  100. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Size3-Regular.ttf +0 -0
  101. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Size3-Regular.woff +0 -0
  102. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Size3-Regular.woff2 +0 -0
  103. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Size4-Regular.ttf +0 -0
  104. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Size4-Regular.woff +0 -0
  105. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Size4-Regular.woff2 +0 -0
  106. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Typewriter-Regular.ttf +0 -0
  107. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Typewriter-Regular.woff +0 -0
  108. package/dist/vfs/usr/lib/R/doc/html/katex/fonts/KaTeX_Typewriter-Regular.woff2 +0 -0
  109. package/dist/vfs/usr/lib/R/doc/html/katex/katex.css +1079 -0
  110. package/dist/vfs/usr/lib/R/doc/html/katex/katex.js +18456 -0
  111. package/dist/vfs/usr/lib/R/doc/html/katex-check.js +13 -0
  112. package/dist/vfs/usr/lib/R/doc/html/katex-config.js +17 -0
  113. package/dist/vfs/usr/lib/R/doc/html/left.jpg +0 -0
  114. package/dist/vfs/usr/lib/R/doc/html/logo.jpg +0 -0
  115. package/dist/vfs/usr/lib/R/doc/html/mathjax-config.js +23 -0
  116. package/dist/vfs/usr/lib/R/doc/html/packages-head-utf8.html +17 -0
  117. package/dist/vfs/usr/lib/R/doc/html/packages.html +51 -0
  118. package/dist/vfs/usr/lib/R/doc/html/prism.css +235 -0
  119. package/dist/vfs/usr/lib/R/doc/html/prism.js +1495 -0
  120. package/dist/vfs/usr/lib/R/doc/html/resources.html +235 -0
  121. package/dist/vfs/usr/lib/R/doc/html/right.jpg +0 -0
  122. package/dist/vfs/usr/lib/R/doc/html/up.jpg +0 -0
  123. package/dist/vfs/usr/lib/R/doc/manual/images/QQ.png +0 -0
  124. package/dist/vfs/usr/lib/R/doc/manual/images/ecdf.png +0 -0
  125. package/dist/vfs/usr/lib/R/doc/manual/images/fig11.png +0 -0
  126. package/dist/vfs/usr/lib/R/doc/manual/images/fig12.png +0 -0
  127. package/dist/vfs/usr/lib/R/doc/manual/images/hist.png +0 -0
  128. package/dist/vfs/usr/lib/R/doc/manual/images/ice.png +0 -0
  129. package/dist/vfs/usr/lib/R/library/base/demo/error.catching.R +101 -0
  130. package/dist/vfs/usr/lib/R/library/base/demo/is.things.R +143 -0
  131. package/dist/vfs/usr/lib/R/library/base/demo/recursion.R +82 -0
  132. package/dist/vfs/usr/lib/R/library/base/demo/scoping.R +50 -0
  133. package/dist/vfs/usr/lib/R/library/base/help/AnIndex +1709 -0
  134. package/dist/vfs/usr/lib/R/library/base/help/aliases.rds +0 -0
  135. package/dist/vfs/usr/lib/R/library/base/help/base.rdb +0 -0
  136. package/dist/vfs/usr/lib/R/library/base/help/base.rdx +0 -0
  137. package/dist/vfs/usr/lib/R/library/base/help/paths.rds +0 -0
  138. package/dist/vfs/usr/lib/R/library/base/html/00Index.html +2754 -0
  139. package/dist/vfs/usr/lib/R/library/base/html/R.css +130 -0
  140. package/dist/vfs/usr/lib/R/library/compiler/help/AnIndex +9 -0
  141. package/dist/vfs/usr/lib/R/library/compiler/help/aliases.rds +0 -0
  142. package/dist/vfs/usr/lib/R/library/compiler/help/compiler.rdb +0 -0
  143. package/dist/vfs/usr/lib/R/library/compiler/help/compiler.rdx +0 -0
  144. package/dist/vfs/usr/lib/R/library/compiler/help/paths.rds +0 -0
  145. package/dist/vfs/usr/lib/R/library/compiler/html/00Index.html +43 -0
  146. package/dist/vfs/usr/lib/R/library/compiler/html/R.css +130 -0
  147. package/dist/vfs/usr/lib/R/library/compiler/tests/assign.R +152 -0
  148. package/dist/vfs/usr/lib/R/library/compiler/tests/basics.R +104 -0
  149. package/dist/vfs/usr/lib/R/library/compiler/tests/const.R +65 -0
  150. package/dist/vfs/usr/lib/R/library/compiler/tests/curexpr.R +96 -0
  151. package/dist/vfs/usr/lib/R/library/compiler/tests/envir.R +90 -0
  152. package/dist/vfs/usr/lib/R/library/compiler/tests/jit.R +16 -0
  153. package/dist/vfs/usr/lib/R/library/compiler/tests/loop.R +26 -0
  154. package/dist/vfs/usr/lib/R/library/compiler/tests/srcref.R +77 -0
  155. package/dist/vfs/usr/lib/R/library/compiler/tests/switch.R +98 -0
  156. package/dist/vfs/usr/lib/R/library/compiler/tests/vischk.R +121 -0
  157. package/dist/vfs/usr/lib/R/library/datasets/help/AnIndex +109 -0
  158. package/dist/vfs/usr/lib/R/library/datasets/help/aliases.rds +0 -0
  159. package/dist/vfs/usr/lib/R/library/datasets/help/datasets.rdb +0 -0
  160. package/dist/vfs/usr/lib/R/library/datasets/help/datasets.rdx +0 -0
  161. package/dist/vfs/usr/lib/R/library/datasets/help/paths.rds +0 -0
  162. package/dist/vfs/usr/lib/R/library/datasets/html/00Index.html +373 -0
  163. package/dist/vfs/usr/lib/R/library/datasets/html/R.css +130 -0
  164. package/dist/vfs/usr/lib/R/library/grDevices/afm/ArialMT-Bold.afm.gz +0 -0
  165. package/dist/vfs/usr/lib/R/library/grDevices/afm/ArialMT-BoldItalic.afm.gz +0 -0
  166. package/dist/vfs/usr/lib/R/library/grDevices/afm/ArialMT-Italic.afm.gz +0 -0
  167. package/dist/vfs/usr/lib/R/library/grDevices/afm/ArialMT.afm.gz +0 -0
  168. package/dist/vfs/usr/lib/R/library/grDevices/afm/CM_boldx_10.afm.gz +0 -0
  169. package/dist/vfs/usr/lib/R/library/grDevices/afm/CM_boldx_italic_10.afm.gz +0 -0
  170. package/dist/vfs/usr/lib/R/library/grDevices/afm/CM_italic_10.afm.gz +0 -0
  171. package/dist/vfs/usr/lib/R/library/grDevices/afm/CM_regular_10.afm.gz +0 -0
  172. package/dist/vfs/usr/lib/R/library/grDevices/afm/CM_symbol_10.afm.gz +0 -0
  173. package/dist/vfs/usr/lib/R/library/grDevices/afm/Courier-Bold.afm.gz +0 -0
  174. package/dist/vfs/usr/lib/R/library/grDevices/afm/Courier-BoldOblique.afm.gz +0 -0
  175. package/dist/vfs/usr/lib/R/library/grDevices/afm/Courier-Oblique.afm.gz +0 -0
  176. package/dist/vfs/usr/lib/R/library/grDevices/afm/Courier.afm.gz +0 -0
  177. package/dist/vfs/usr/lib/R/library/grDevices/afm/Helvetica-Bold.afm.gz +0 -0
  178. package/dist/vfs/usr/lib/R/library/grDevices/afm/Helvetica-BoldOblique.afm.gz +0 -0
  179. package/dist/vfs/usr/lib/R/library/grDevices/afm/Helvetica-Oblique.afm.gz +0 -0
  180. package/dist/vfs/usr/lib/R/library/grDevices/afm/Helvetica.afm.gz +0 -0
  181. package/dist/vfs/usr/lib/R/library/grDevices/afm/MustRead.html +20 -0
  182. package/dist/vfs/usr/lib/R/library/grDevices/afm/README +21 -0
  183. package/dist/vfs/usr/lib/R/library/grDevices/afm/Symbol.afm.gz +0 -0
  184. package/dist/vfs/usr/lib/R/library/grDevices/afm/Times-Bold.afm.gz +0 -0
  185. package/dist/vfs/usr/lib/R/library/grDevices/afm/Times-BoldItalic.afm.gz +0 -0
  186. package/dist/vfs/usr/lib/R/library/grDevices/afm/Times-Italic.afm.gz +0 -0
  187. package/dist/vfs/usr/lib/R/library/grDevices/afm/Times-Roman.afm.gz +0 -0
  188. package/dist/vfs/usr/lib/R/library/grDevices/afm/ZapfDingbats.afm.gz +0 -0
  189. package/dist/vfs/usr/lib/R/library/grDevices/afm/a010013l.afm.gz +0 -0
  190. package/dist/vfs/usr/lib/R/library/grDevices/afm/a010015l.afm.gz +0 -0
  191. package/dist/vfs/usr/lib/R/library/grDevices/afm/a010033l.afm.gz +0 -0
  192. package/dist/vfs/usr/lib/R/library/grDevices/afm/a010035l.afm.gz +0 -0
  193. package/dist/vfs/usr/lib/R/library/grDevices/afm/agd_____.afm.gz +0 -0
  194. package/dist/vfs/usr/lib/R/library/grDevices/afm/agdo____.afm.gz +0 -0
  195. package/dist/vfs/usr/lib/R/library/grDevices/afm/agw_____.afm.gz +0 -0
  196. package/dist/vfs/usr/lib/R/library/grDevices/afm/agwo____.afm.gz +0 -0
  197. package/dist/vfs/usr/lib/R/library/grDevices/afm/b018012l.afm.gz +0 -0
  198. package/dist/vfs/usr/lib/R/library/grDevices/afm/b018015l.afm.gz +0 -0
  199. package/dist/vfs/usr/lib/R/library/grDevices/afm/b018032l.afm.gz +0 -0
  200. package/dist/vfs/usr/lib/R/library/grDevices/afm/b018035l.afm.gz +0 -0
  201. package/dist/vfs/usr/lib/R/library/grDevices/afm/bkd_____.afm.gz +0 -0
  202. package/dist/vfs/usr/lib/R/library/grDevices/afm/bkdi____.afm.gz +0 -0
  203. package/dist/vfs/usr/lib/R/library/grDevices/afm/bkl_____.afm.gz +0 -0
  204. package/dist/vfs/usr/lib/R/library/grDevices/afm/bkli____.afm.gz +0 -0
  205. package/dist/vfs/usr/lib/R/library/grDevices/afm/c059013l.afm.gz +0 -0
  206. package/dist/vfs/usr/lib/R/library/grDevices/afm/c059016l.afm.gz +0 -0
  207. package/dist/vfs/usr/lib/R/library/grDevices/afm/c059033l.afm.gz +0 -0
  208. package/dist/vfs/usr/lib/R/library/grDevices/afm/c059036l.afm.gz +0 -0
  209. package/dist/vfs/usr/lib/R/library/grDevices/afm/cmbxti10.afm.gz +0 -0
  210. package/dist/vfs/usr/lib/R/library/grDevices/afm/cmti10.afm.gz +0 -0
  211. package/dist/vfs/usr/lib/R/library/grDevices/afm/cob_____.afm.gz +0 -0
  212. package/dist/vfs/usr/lib/R/library/grDevices/afm/cobo____.afm.gz +0 -0
  213. package/dist/vfs/usr/lib/R/library/grDevices/afm/com_____.afm.gz +0 -0
  214. package/dist/vfs/usr/lib/R/library/grDevices/afm/coo_____.afm.gz +0 -0
  215. package/dist/vfs/usr/lib/R/library/grDevices/afm/hv______.afm.gz +0 -0
  216. package/dist/vfs/usr/lib/R/library/grDevices/afm/hvb_____.afm.gz +0 -0
  217. package/dist/vfs/usr/lib/R/library/grDevices/afm/hvbo____.afm.gz +0 -0
  218. package/dist/vfs/usr/lib/R/library/grDevices/afm/hvn_____.afm.gz +0 -0
  219. package/dist/vfs/usr/lib/R/library/grDevices/afm/hvnb____.afm.gz +0 -0
  220. package/dist/vfs/usr/lib/R/library/grDevices/afm/hvnbo___.afm.gz +0 -0
  221. package/dist/vfs/usr/lib/R/library/grDevices/afm/hvno____.afm.gz +0 -0
  222. package/dist/vfs/usr/lib/R/library/grDevices/afm/hvo_____.afm.gz +0 -0
  223. package/dist/vfs/usr/lib/R/library/grDevices/afm/n019003l.afm.gz +0 -0
  224. package/dist/vfs/usr/lib/R/library/grDevices/afm/n019004l.afm.gz +0 -0
  225. package/dist/vfs/usr/lib/R/library/grDevices/afm/n019023l.afm.gz +0 -0
  226. package/dist/vfs/usr/lib/R/library/grDevices/afm/n019024l.afm.gz +0 -0
  227. package/dist/vfs/usr/lib/R/library/grDevices/afm/n019043l.afm.gz +0 -0
  228. package/dist/vfs/usr/lib/R/library/grDevices/afm/n019044l.afm.gz +0 -0
  229. package/dist/vfs/usr/lib/R/library/grDevices/afm/n019063l.afm.gz +0 -0
  230. package/dist/vfs/usr/lib/R/library/grDevices/afm/n019064l.afm.gz +0 -0
  231. package/dist/vfs/usr/lib/R/library/grDevices/afm/n021003l.afm.gz +0 -0
  232. package/dist/vfs/usr/lib/R/library/grDevices/afm/n021004l.afm.gz +0 -0
  233. package/dist/vfs/usr/lib/R/library/grDevices/afm/n021023l.afm.gz +0 -0
  234. package/dist/vfs/usr/lib/R/library/grDevices/afm/n021024l.afm.gz +0 -0
  235. package/dist/vfs/usr/lib/R/library/grDevices/afm/n022003l.afm.gz +0 -0
  236. package/dist/vfs/usr/lib/R/library/grDevices/afm/n022004l.afm.gz +0 -0
  237. package/dist/vfs/usr/lib/R/library/grDevices/afm/n022023l.afm.gz +0 -0
  238. package/dist/vfs/usr/lib/R/library/grDevices/afm/n022024l.afm.gz +0 -0
  239. package/dist/vfs/usr/lib/R/library/grDevices/afm/ncb_____.afm.gz +0 -0
  240. package/dist/vfs/usr/lib/R/library/grDevices/afm/ncbi____.afm.gz +0 -0
  241. package/dist/vfs/usr/lib/R/library/grDevices/afm/nci_____.afm.gz +0 -0
  242. package/dist/vfs/usr/lib/R/library/grDevices/afm/ncr_____.afm.gz +0 -0
  243. package/dist/vfs/usr/lib/R/library/grDevices/afm/p052003l.afm.gz +0 -0
  244. package/dist/vfs/usr/lib/R/library/grDevices/afm/p052004l.afm.gz +0 -0
  245. package/dist/vfs/usr/lib/R/library/grDevices/afm/p052023l.afm.gz +0 -0
  246. package/dist/vfs/usr/lib/R/library/grDevices/afm/p052024l.afm.gz +0 -0
  247. package/dist/vfs/usr/lib/R/library/grDevices/afm/pob_____.afm.gz +0 -0
  248. package/dist/vfs/usr/lib/R/library/grDevices/afm/pobi____.afm.gz +0 -0
  249. package/dist/vfs/usr/lib/R/library/grDevices/afm/poi_____.afm.gz +0 -0
  250. package/dist/vfs/usr/lib/R/library/grDevices/afm/por_____.afm.gz +0 -0
  251. package/dist/vfs/usr/lib/R/library/grDevices/afm/s050000l.afm.gz +0 -0
  252. package/dist/vfs/usr/lib/R/library/grDevices/afm/sy______.afm.gz +0 -0
  253. package/dist/vfs/usr/lib/R/library/grDevices/afm/tib_____.afm.gz +0 -0
  254. package/dist/vfs/usr/lib/R/library/grDevices/afm/tibi____.afm.gz +0 -0
  255. package/dist/vfs/usr/lib/R/library/grDevices/afm/tii_____.afm.gz +0 -0
  256. package/dist/vfs/usr/lib/R/library/grDevices/afm/tir_____.afm.gz +0 -0
  257. package/dist/vfs/usr/lib/R/library/grDevices/demo/colors.R +108 -0
  258. package/dist/vfs/usr/lib/R/library/grDevices/demo/hclColors.R +63 -0
  259. package/dist/vfs/usr/lib/R/library/grDevices/enc/AdobeStd.enc +37 -0
  260. package/dist/vfs/usr/lib/R/library/grDevices/enc/AdobeSym.enc +42 -0
  261. package/dist/vfs/usr/lib/R/library/grDevices/enc/CP1250.enc +36 -0
  262. package/dist/vfs/usr/lib/R/library/grDevices/enc/CP1251.enc +37 -0
  263. package/dist/vfs/usr/lib/R/library/grDevices/enc/CP1253.enc +37 -0
  264. package/dist/vfs/usr/lib/R/library/grDevices/enc/CP1257.enc +36 -0
  265. package/dist/vfs/usr/lib/R/library/grDevices/enc/Cyrillic.enc +40 -0
  266. package/dist/vfs/usr/lib/R/library/grDevices/enc/Greek.enc +38 -0
  267. package/dist/vfs/usr/lib/R/library/grDevices/enc/ISOLatin1.enc +39 -0
  268. package/dist/vfs/usr/lib/R/library/grDevices/enc/ISOLatin2.enc +40 -0
  269. package/dist/vfs/usr/lib/R/library/grDevices/enc/ISOLatin7.enc +40 -0
  270. package/dist/vfs/usr/lib/R/library/grDevices/enc/ISOLatin9.enc +39 -0
  271. package/dist/vfs/usr/lib/R/library/grDevices/enc/KOI8-R.enc +39 -0
  272. package/dist/vfs/usr/lib/R/library/grDevices/enc/KOI8-U.enc +39 -0
  273. package/dist/vfs/usr/lib/R/library/grDevices/enc/MacRoman.enc +39 -0
  274. package/dist/vfs/usr/lib/R/library/grDevices/enc/PDFDoc.enc +39 -0
  275. package/dist/vfs/usr/lib/R/library/grDevices/enc/TeXtext.enc +39 -0
  276. package/dist/vfs/usr/lib/R/library/grDevices/enc/WinAnsi.enc +40 -0
  277. package/dist/vfs/usr/lib/R/library/grDevices/fonts/Montserrat/static/Montserrat-BoldItalic.ttf +0 -0
  278. package/dist/vfs/usr/lib/R/library/grDevices/fonts/Montserrat/static/Montserrat-Medium.ttf +0 -0
  279. package/dist/vfs/usr/lib/R/library/grDevices/fonts/Roboto/LICENSE.txt +202 -0
  280. package/dist/vfs/usr/lib/R/library/grDevices/fonts/Roboto/Roboto-Medium.ttf +0 -0
  281. package/dist/vfs/usr/lib/R/library/grDevices/help/AnIndex +192 -0
  282. package/dist/vfs/usr/lib/R/library/grDevices/help/aliases.rds +0 -0
  283. package/dist/vfs/usr/lib/R/library/grDevices/help/grDevices.rdb +0 -0
  284. package/dist/vfs/usr/lib/R/library/grDevices/help/grDevices.rdx +0 -0
  285. package/dist/vfs/usr/lib/R/library/grDevices/help/paths.rds +0 -0
  286. package/dist/vfs/usr/lib/R/library/grDevices/html/00Index.html +520 -0
  287. package/dist/vfs/usr/lib/R/library/grDevices/html/R.css +130 -0
  288. package/dist/vfs/usr/lib/R/library/grDevices/libs/grDevices.so +0 -0
  289. package/dist/vfs/usr/lib/R/library/grDevices/tests/convertColor-tests.R +47 -0
  290. package/dist/vfs/usr/lib/R/library/grDevices/tests/grDev-tsts.R +7 -0
  291. package/dist/vfs/usr/lib/R/library/grDevices/tests/palettes-tests.R +58 -0
  292. package/dist/vfs/usr/lib/R/library/grDevices/tests/ps-tests.R +39 -0
  293. package/dist/vfs/usr/lib/R/library/grDevices/tests/ps-tests.Rout.save +98 -0
  294. package/dist/vfs/usr/lib/R/library/grDevices/tests/saved-recordPlot.R +36 -0
  295. package/dist/vfs/usr/lib/R/library/grDevices/tests/xfig-tests.R +84 -0
  296. package/dist/vfs/usr/lib/R/library/grDevices/tests/xfig-tests.Rout.save +105 -0
  297. package/dist/vfs/usr/lib/R/library/graphics/demo/Hershey.R +394 -0
  298. package/dist/vfs/usr/lib/R/library/graphics/demo/Japanese.R +716 -0
  299. package/dist/vfs/usr/lib/R/library/graphics/demo/graphics.R +145 -0
  300. package/dist/vfs/usr/lib/R/library/graphics/demo/image.R +37 -0
  301. package/dist/vfs/usr/lib/R/library/graphics/demo/persp.R +86 -0
  302. package/dist/vfs/usr/lib/R/library/graphics/demo/plotmath.R +197 -0
  303. package/dist/vfs/usr/lib/R/library/graphics/help/AnIndex +130 -0
  304. package/dist/vfs/usr/lib/R/library/graphics/help/aliases.rds +0 -0
  305. package/dist/vfs/usr/lib/R/library/graphics/help/figures/mai.pdf +0 -0
  306. package/dist/vfs/usr/lib/R/library/graphics/help/figures/mai.png +0 -0
  307. package/dist/vfs/usr/lib/R/library/graphics/help/figures/oma.pdf +0 -0
  308. package/dist/vfs/usr/lib/R/library/graphics/help/figures/oma.png +0 -0
  309. package/dist/vfs/usr/lib/R/library/graphics/help/figures/pch.pdf +0 -0
  310. package/dist/vfs/usr/lib/R/library/graphics/help/figures/pch.png +0 -0
  311. package/dist/vfs/usr/lib/R/library/graphics/help/figures/pch.svg +185 -0
  312. package/dist/vfs/usr/lib/R/library/graphics/help/graphics.rdb +0 -0
  313. package/dist/vfs/usr/lib/R/library/graphics/help/graphics.rdx +0 -0
  314. package/dist/vfs/usr/lib/R/library/graphics/help/paths.rds +0 -0
  315. package/dist/vfs/usr/lib/R/library/graphics/html/00Index.html +222 -0
  316. package/dist/vfs/usr/lib/R/library/graphics/html/R.css +130 -0
  317. package/dist/vfs/usr/lib/R/library/grid/doc/DivByZero.txt +50 -0
  318. package/dist/vfs/usr/lib/R/library/grid/doc/changes.txt +1714 -0
  319. package/dist/vfs/usr/lib/R/library/grid/doc/displaylist.pdf +0 -0
  320. package/dist/vfs/usr/lib/R/library/grid/doc/frame.pdf +0 -0
  321. package/dist/vfs/usr/lib/R/library/grid/doc/grid.pdf +0 -0
  322. package/dist/vfs/usr/lib/R/library/grid/doc/grobs.pdf +0 -0
  323. package/dist/vfs/usr/lib/R/library/grid/doc/interactive.pdf +0 -0
  324. package/dist/vfs/usr/lib/R/library/grid/doc/locndimn.pdf +0 -0
  325. package/dist/vfs/usr/lib/R/library/grid/doc/moveline.pdf +0 -0
  326. package/dist/vfs/usr/lib/R/library/grid/doc/nonfinite.pdf +0 -0
  327. package/dist/vfs/usr/lib/R/library/grid/doc/plotexample.pdf +0 -0
  328. package/dist/vfs/usr/lib/R/library/grid/doc/rotated.pdf +0 -0
  329. package/dist/vfs/usr/lib/R/library/grid/doc/saveload.pdf +0 -0
  330. package/dist/vfs/usr/lib/R/library/grid/doc/sharing.pdf +0 -0
  331. package/dist/vfs/usr/lib/R/library/grid/doc/viewports.pdf +0 -0
  332. package/dist/vfs/usr/lib/R/library/grid/help/AnIndex +269 -0
  333. package/dist/vfs/usr/lib/R/library/grid/help/aliases.rds +0 -0
  334. package/dist/vfs/usr/lib/R/library/grid/help/grid.rdb +0 -0
  335. package/dist/vfs/usr/lib/R/library/grid/help/grid.rdx +0 -0
  336. package/dist/vfs/usr/lib/R/library/grid/help/paths.rds +0 -0
  337. package/dist/vfs/usr/lib/R/library/grid/html/00Index.html +648 -0
  338. package/dist/vfs/usr/lib/R/library/grid/html/R.css +130 -0
  339. package/dist/vfs/usr/lib/R/library/grid/tests/bugs.R +30 -0
  340. package/dist/vfs/usr/lib/R/library/grid/tests/clippaths.R +418 -0
  341. package/dist/vfs/usr/lib/R/library/grid/tests/compositing.R +107 -0
  342. package/dist/vfs/usr/lib/R/library/grid/tests/coords.R +598 -0
  343. package/dist/vfs/usr/lib/R/library/grid/tests/glyphs.R +325 -0
  344. package/dist/vfs/usr/lib/R/library/grid/tests/grep.R +49 -0
  345. package/dist/vfs/usr/lib/R/library/grid/tests/grep.Rout.save +100 -0
  346. package/dist/vfs/usr/lib/R/library/grid/tests/groups.R +549 -0
  347. package/dist/vfs/usr/lib/R/library/grid/tests/masks.R +417 -0
  348. package/dist/vfs/usr/lib/R/library/grid/tests/nesting.R +113 -0
  349. package/dist/vfs/usr/lib/R/library/grid/tests/paths.R +241 -0
  350. package/dist/vfs/usr/lib/R/library/grid/tests/patterns.R +1435 -0
  351. package/dist/vfs/usr/lib/R/library/grid/tests/reg.R +433 -0
  352. package/dist/vfs/usr/lib/R/library/grid/tests/testls.R +158 -0
  353. package/dist/vfs/usr/lib/R/library/grid/tests/testls.Rout.save +343 -0
  354. package/dist/vfs/usr/lib/R/library/grid/tests/units.R +180 -0
  355. package/dist/vfs/usr/lib/R/library/methods/help/AnIndex +483 -0
  356. package/dist/vfs/usr/lib/R/library/methods/help/aliases.rds +0 -0
  357. package/dist/vfs/usr/lib/R/library/methods/help/methods.rdb +0 -0
  358. package/dist/vfs/usr/lib/R/library/methods/help/methods.rdx +0 -0
  359. package/dist/vfs/usr/lib/R/library/methods/help/paths.rds +0 -0
  360. package/dist/vfs/usr/lib/R/library/methods/html/00Index.html +727 -0
  361. package/dist/vfs/usr/lib/R/library/methods/html/R.css +130 -0
  362. package/dist/vfs/usr/lib/R/library/methods/tests/S3.R +29 -0
  363. package/dist/vfs/usr/lib/R/library/methods/tests/basicRefClass.R +530 -0
  364. package/dist/vfs/usr/lib/R/library/methods/tests/duplicateClass.R +35 -0
  365. package/dist/vfs/usr/lib/R/library/methods/tests/envRefClass.R +18 -0
  366. package/dist/vfs/usr/lib/R/library/methods/tests/fieldAssignments.R +30 -0
  367. package/dist/vfs/usr/lib/R/library/methods/tests/mixinInitialize.R +86 -0
  368. package/dist/vfs/usr/lib/R/library/methods/tests/namesAndSlots.R +18 -0
  369. package/dist/vfs/usr/lib/R/library/methods/tests/nextWithDots.R +21 -0
  370. package/dist/vfs/usr/lib/R/library/methods/tests/refClassExample.R +51 -0
  371. package/dist/vfs/usr/lib/R/library/methods/tests/testConditionalIs.R +38 -0
  372. package/dist/vfs/usr/lib/R/library/methods/tests/testGroupGeneric.R +83 -0
  373. package/dist/vfs/usr/lib/R/library/methods/tests/testIs.R +61 -0
  374. package/dist/vfs/usr/lib/R/library/parallel/DESCRIPTION +16 -0
  375. package/dist/vfs/usr/lib/R/library/parallel/INDEX +16 -0
  376. package/dist/vfs/usr/lib/R/library/parallel/Meta/Rd.rds +0 -0
  377. package/dist/vfs/usr/lib/R/library/parallel/Meta/features.rds +0 -0
  378. package/dist/vfs/usr/lib/R/library/parallel/Meta/hsearch.rds +0 -0
  379. package/dist/vfs/usr/lib/R/library/parallel/Meta/links.rds +0 -0
  380. package/dist/vfs/usr/lib/R/library/parallel/Meta/nsInfo.rds +0 -0
  381. package/dist/vfs/usr/lib/R/library/parallel/Meta/package.rds +0 -0
  382. package/dist/vfs/usr/lib/R/library/parallel/NAMESPACE +42 -0
  383. package/dist/vfs/usr/lib/R/library/parallel/R/parallel +27 -0
  384. package/dist/vfs/usr/lib/R/library/parallel/R/parallel.rdb +0 -0
  385. package/dist/vfs/usr/lib/R/library/parallel/R/parallel.rdx +0 -0
  386. package/dist/vfs/usr/lib/R/library/parallel/doc/parallel.pdf +0 -0
  387. package/dist/vfs/usr/lib/R/library/parallel/help/AnIndex +45 -0
  388. package/dist/vfs/usr/lib/R/library/parallel/help/aliases.rds +0 -0
  389. package/dist/vfs/usr/lib/R/library/parallel/help/parallel.rdb +0 -0
  390. package/dist/vfs/usr/lib/R/library/parallel/help/parallel.rdx +0 -0
  391. package/dist/vfs/usr/lib/R/library/parallel/help/paths.rds +0 -0
  392. package/dist/vfs/usr/lib/R/library/parallel/html/00Index.html +116 -0
  393. package/dist/vfs/usr/lib/R/library/parallel/html/R.css +130 -0
  394. package/dist/vfs/usr/lib/R/library/parallel/libs/parallel.so +0 -0
  395. package/dist/vfs/usr/lib/R/library/parallel/tests/Master.R +36 -0
  396. package/dist/vfs/usr/lib/R/library/parallel/tests/RSeed.R +25 -0
  397. package/dist/vfs/usr/lib/R/library/parallel/tests/multicore1.RR +10 -0
  398. package/dist/vfs/usr/lib/R/library/parallel/tests/multicore2.RR +15 -0
  399. package/dist/vfs/usr/lib/R/library/parallel/tests/multicore2.Rout.save +47 -0
  400. package/dist/vfs/usr/lib/R/library/parallel/tests/multicore3.RR +9 -0
  401. package/dist/vfs/usr/lib/R/library/parallel/tests/snow1.RR +41 -0
  402. package/dist/vfs/usr/lib/R/library/parallel/tests/snow2.RR +20 -0
  403. package/dist/vfs/usr/lib/R/library/parallel/tests/snow2.Rout.save +53 -0
  404. package/dist/vfs/usr/lib/R/library/splines/help/AnIndex +22 -0
  405. package/dist/vfs/usr/lib/R/library/splines/help/aliases.rds +0 -0
  406. package/dist/vfs/usr/lib/R/library/splines/help/paths.rds +0 -0
  407. package/dist/vfs/usr/lib/R/library/splines/help/splines.rdb +0 -0
  408. package/dist/vfs/usr/lib/R/library/splines/help/splines.rdx +0 -0
  409. package/dist/vfs/usr/lib/R/library/splines/html/00Index.html +69 -0
  410. package/dist/vfs/usr/lib/R/library/splines/html/R.css +130 -0
  411. package/dist/vfs/usr/lib/R/library/splines/tests/sparse-tst.R +35 -0
  412. package/dist/vfs/usr/lib/R/library/splines/tests/spline-tst.R +296 -0
  413. package/dist/vfs/usr/lib/R/library/stats/demo/glm.vr.R +24 -0
  414. package/dist/vfs/usr/lib/R/library/stats/demo/lm.glm.R +144 -0
  415. package/dist/vfs/usr/lib/R/library/stats/demo/nlm.R +110 -0
  416. package/dist/vfs/usr/lib/R/library/stats/demo/smooth.R +39 -0
  417. package/dist/vfs/usr/lib/R/library/stats/help/AnIndex +780 -0
  418. package/dist/vfs/usr/lib/R/library/stats/help/aliases.rds +0 -0
  419. package/dist/vfs/usr/lib/R/library/stats/help/paths.rds +0 -0
  420. package/dist/vfs/usr/lib/R/library/stats/help/stats.rdb +0 -0
  421. package/dist/vfs/usr/lib/R/library/stats/help/stats.rdx +0 -0
  422. package/dist/vfs/usr/lib/R/library/stats/html/00Index.html +1354 -0
  423. package/dist/vfs/usr/lib/R/library/stats/html/R.css +130 -0
  424. package/dist/vfs/usr/lib/R/library/stats/tests/NLSstClosest.R +12 -0
  425. package/dist/vfs/usr/lib/R/library/stats/tests/anorexia.rda +0 -0
  426. package/dist/vfs/usr/lib/R/library/stats/tests/arimaML.R +265 -0
  427. package/dist/vfs/usr/lib/R/library/stats/tests/bandwidth.R +19 -0
  428. package/dist/vfs/usr/lib/R/library/stats/tests/bandwidth.Rout.save +49 -0
  429. package/dist/vfs/usr/lib/R/library/stats/tests/birthwt.rda +0 -0
  430. package/dist/vfs/usr/lib/R/library/stats/tests/cmdscale.R +10 -0
  431. package/dist/vfs/usr/lib/R/library/stats/tests/drop1-polr.R +30 -0
  432. package/dist/vfs/usr/lib/R/library/stats/tests/glm-etc.R +162 -0
  433. package/dist/vfs/usr/lib/R/library/stats/tests/glm.R +82 -0
  434. package/dist/vfs/usr/lib/R/library/stats/tests/glm.Rout.save +194 -0
  435. package/dist/vfs/usr/lib/R/library/stats/tests/hills.rds +0 -0
  436. package/dist/vfs/usr/lib/R/library/stats/tests/ig_glm.R +68 -0
  437. package/dist/vfs/usr/lib/R/library/stats/tests/ks-test.R +116 -0
  438. package/dist/vfs/usr/lib/R/library/stats/tests/ks-test.Rout.save +365 -0
  439. package/dist/vfs/usr/lib/R/library/stats/tests/nafns.R +136 -0
  440. package/dist/vfs/usr/lib/R/library/stats/tests/nlm.R +107 -0
  441. package/dist/vfs/usr/lib/R/library/stats/tests/nls.R +389 -0
  442. package/dist/vfs/usr/lib/R/library/stats/tests/nls.Rout.save +828 -0
  443. package/dist/vfs/usr/lib/R/library/stats/tests/offsets.R +39 -0
  444. package/dist/vfs/usr/lib/R/library/stats/tests/ppr.R +6 -0
  445. package/dist/vfs/usr/lib/R/library/stats/tests/ppr_test.csv +443 -0
  446. package/dist/vfs/usr/lib/R/library/stats/tests/simulate.R +87 -0
  447. package/dist/vfs/usr/lib/R/library/stats/tests/simulate.Rout.save +417 -0
  448. package/dist/vfs/usr/lib/R/library/stats/tests/smooth.spline.R +188 -0
  449. package/dist/vfs/usr/lib/R/library/stats/tests/table-margins.R +20 -0
  450. package/dist/vfs/usr/lib/R/library/stats/tests/ts-tests.R +180 -0
  451. package/dist/vfs/usr/lib/R/library/stats4/help/AnIndex +36 -0
  452. package/dist/vfs/usr/lib/R/library/stats4/help/aliases.rds +0 -0
  453. package/dist/vfs/usr/lib/R/library/stats4/help/paths.rds +0 -0
  454. package/dist/vfs/usr/lib/R/library/stats4/help/stats4.rdb +0 -0
  455. package/dist/vfs/usr/lib/R/library/stats4/help/stats4.rdx +0 -0
  456. package/dist/vfs/usr/lib/R/library/stats4/html/00Index.html +75 -0
  457. package/dist/vfs/usr/lib/R/library/stats4/html/R.css +130 -0
  458. package/dist/vfs/usr/lib/R/library/stats4/tests/confint.R +23 -0
  459. package/dist/vfs/usr/lib/R/library/tcltk/DESCRIPTION +12 -0
  460. package/dist/vfs/usr/lib/R/library/tcltk/INDEX +13 -0
  461. package/dist/vfs/usr/lib/R/library/tcltk/Meta/Rd.rds +0 -0
  462. package/dist/vfs/usr/lib/R/library/tcltk/Meta/demo.rds +0 -0
  463. package/dist/vfs/usr/lib/R/library/tcltk/Meta/features.rds +0 -0
  464. package/dist/vfs/usr/lib/R/library/tcltk/Meta/hsearch.rds +0 -0
  465. package/dist/vfs/usr/lib/R/library/tcltk/Meta/links.rds +0 -0
  466. package/dist/vfs/usr/lib/R/library/tcltk/Meta/nsInfo.rds +0 -0
  467. package/dist/vfs/usr/lib/R/library/tcltk/Meta/package.rds +0 -0
  468. package/dist/vfs/usr/lib/R/library/tcltk/NAMESPACE +36 -0
  469. package/dist/vfs/usr/lib/R/library/tcltk/R/tcltk +20 -0
  470. package/dist/vfs/usr/lib/R/library/tcltk/demo/tkcanvas.R +151 -0
  471. package/dist/vfs/usr/lib/R/library/tcltk/demo/tkdensity.R +104 -0
  472. package/dist/vfs/usr/lib/R/library/tcltk/demo/tkfaq.R +32 -0
  473. package/dist/vfs/usr/lib/R/library/tcltk/demo/tkttest.R +89 -0
  474. package/dist/vfs/usr/lib/R/library/tcltk/exec/Tk-frontend.R +25 -0
  475. package/dist/vfs/usr/lib/R/library/tcltk/exec/console.tcl +79 -0
  476. package/dist/vfs/usr/lib/R/library/tcltk/exec/hierarchy.tcl +1271 -0
  477. package/dist/vfs/usr/lib/R/library/tcltk/exec/pkgIndex.tcl +50 -0
  478. package/dist/vfs/usr/lib/R/library/tcltk/exec/progressbar.tcl +2435 -0
  479. package/dist/vfs/usr/lib/R/library/tcltk/exec/util-dump.tcl +660 -0
  480. package/dist/vfs/usr/lib/R/library/tcltk/exec/util-expand.tcl +207 -0
  481. package/dist/vfs/usr/lib/R/library/tcltk/exec/util-number.tcl +101 -0
  482. package/dist/vfs/usr/lib/R/library/tcltk/exec/util-string.tcl +149 -0
  483. package/dist/vfs/usr/lib/R/library/tcltk/exec/util-tk.tcl +244 -0
  484. package/dist/vfs/usr/lib/R/library/tcltk/exec/util.tcl +895 -0
  485. package/dist/vfs/usr/lib/R/library/tcltk/exec/widget.tcl +975 -0
  486. package/dist/vfs/usr/lib/R/library/tcltk/help/AnIndex +305 -0
  487. package/dist/vfs/usr/lib/R/library/tcltk/help/aliases.rds +0 -0
  488. package/dist/vfs/usr/lib/R/library/tcltk/help/paths.rds +0 -0
  489. package/dist/vfs/usr/lib/R/library/tcltk/help/tcltk.rdb +0 -0
  490. package/dist/vfs/usr/lib/R/library/tcltk/help/tcltk.rdx +0 -0
  491. package/dist/vfs/usr/lib/R/library/tcltk/html/00Index.html +680 -0
  492. package/dist/vfs/usr/lib/R/library/tcltk/html/R.css +130 -0
  493. package/dist/vfs/usr/lib/R/library/tools/help/AnIndex +160 -0
  494. package/dist/vfs/usr/lib/R/library/tools/help/aliases.rds +0 -0
  495. package/dist/vfs/usr/lib/R/library/tools/help/paths.rds +0 -0
  496. package/dist/vfs/usr/lib/R/library/tools/help/tools.rdb +0 -0
  497. package/dist/vfs/usr/lib/R/library/tools/help/tools.rdx +0 -0
  498. package/dist/vfs/usr/lib/R/library/tools/html/00Index.html +455 -0
  499. package/dist/vfs/usr/lib/R/library/tools/html/R.css +130 -0
  500. package/dist/vfs/usr/lib/R/library/tools/tests/QC.R +34 -0
  501. package/dist/vfs/usr/lib/R/library/tools/tests/Rd-Sexpr-error.Rd +8 -0
  502. package/dist/vfs/usr/lib/R/library/tools/tests/Rd-Sexpr-hide-empty.Rd +18 -0
  503. package/dist/vfs/usr/lib/R/library/tools/tests/Rd-Sexpr-warning.Rd +6 -0
  504. package/dist/vfs/usr/lib/R/library/tools/tests/Rd.R +53 -0
  505. package/dist/vfs/usr/lib/R/library/tools/tests/Rd2HTML.R +52 -0
  506. package/dist/vfs/usr/lib/R/library/tools/tests/S3.R +8 -0
  507. package/dist/vfs/usr/lib/R/library/tools/tests/doi.Rd +8 -0
  508. package/dist/vfs/usr/lib/R/library/tools/tests/undoc.R +4 -0
  509. package/dist/vfs/usr/lib/R/library/translations/DESCRIPTION +7 -0
  510. package/dist/vfs/usr/lib/R/library/translations/Meta/features.rds +0 -0
  511. package/dist/vfs/usr/lib/R/library/translations/Meta/package.rds +0 -0
  512. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-base.mo +0 -0
  513. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-compiler.mo +0 -0
  514. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-grDevices.mo +0 -0
  515. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-graphics.mo +0 -0
  516. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-grid.mo +0 -0
  517. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-methods.mo +0 -0
  518. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-parallel.mo +0 -0
  519. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-splines.mo +0 -0
  520. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-stats.mo +0 -0
  521. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-stats4.mo +0 -0
  522. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-tcltk.mo +0 -0
  523. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-tools.mo +0 -0
  524. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R-utils.mo +0 -0
  525. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/R.mo +0 -0
  526. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/RGui.mo +0 -0
  527. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/grDevices.mo +0 -0
  528. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/graphics.mo +0 -0
  529. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/grid.mo +0 -0
  530. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/methods.mo +0 -0
  531. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/parallel.mo +0 -0
  532. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/splines.mo +0 -0
  533. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/stats.mo +0 -0
  534. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/tcltk.mo +0 -0
  535. package/dist/vfs/usr/lib/R/library/translations/da/LC_MESSAGES/tools.mo +0 -0
  536. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-base.mo +0 -0
  537. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-compiler.mo +0 -0
  538. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-grDevices.mo +0 -0
  539. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-graphics.mo +0 -0
  540. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-grid.mo +0 -0
  541. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-methods.mo +0 -0
  542. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-parallel.mo +0 -0
  543. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-splines.mo +0 -0
  544. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-stats.mo +0 -0
  545. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-stats4.mo +0 -0
  546. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-tcltk.mo +0 -0
  547. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-tools.mo +0 -0
  548. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R-utils.mo +0 -0
  549. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/R.mo +0 -0
  550. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/RGui.mo +0 -0
  551. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/grDevices.mo +0 -0
  552. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/graphics.mo +0 -0
  553. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/grid.mo +0 -0
  554. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/methods.mo +0 -0
  555. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/parallel.mo +0 -0
  556. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/splines.mo +0 -0
  557. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/stats.mo +0 -0
  558. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/tcltk.mo +0 -0
  559. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/tools.mo +0 -0
  560. package/dist/vfs/usr/lib/R/library/translations/de/LC_MESSAGES/utils.mo +0 -0
  561. package/dist/vfs/usr/lib/R/library/translations/en/LC_MESSAGES/R.mo +0 -0
  562. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-base.mo +0 -0
  563. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-compiler.mo +0 -0
  564. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-grDevices.mo +0 -0
  565. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-graphics.mo +0 -0
  566. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-grid.mo +0 -0
  567. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-methods.mo +0 -0
  568. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-parallel.mo +0 -0
  569. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-splines.mo +0 -0
  570. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-stats.mo +0 -0
  571. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-stats4.mo +0 -0
  572. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-tcltk.mo +0 -0
  573. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-tools.mo +0 -0
  574. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-utils.mo +0 -0
  575. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/R.mo +0 -0
  576. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/grDevices.mo +0 -0
  577. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/graphics.mo +0 -0
  578. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/grid.mo +0 -0
  579. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/methods.mo +0 -0
  580. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/parallel.mo +0 -0
  581. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/splines.mo +0 -0
  582. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/stats.mo +0 -0
  583. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/tcltk.mo +0 -0
  584. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/tools.mo +0 -0
  585. package/dist/vfs/usr/lib/R/library/translations/en@quot/LC_MESSAGES/utils.mo +0 -0
  586. package/dist/vfs/usr/lib/R/library/translations/en_GB/LC_MESSAGES/R-grDevices.mo +0 -0
  587. package/dist/vfs/usr/lib/R/library/translations/en_GB/LC_MESSAGES/R.mo +0 -0
  588. package/dist/vfs/usr/lib/R/library/translations/en_GB/LC_MESSAGES/grDevices.mo +0 -0
  589. package/dist/vfs/usr/lib/R/library/translations/es/LC_MESSAGES/R.mo +0 -0
  590. package/dist/vfs/usr/lib/R/library/translations/es/LC_MESSAGES/RGui.mo +0 -0
  591. package/dist/vfs/usr/lib/R/library/translations/es/LC_MESSAGES/graphics.mo +0 -0
  592. package/dist/vfs/usr/lib/R/library/translations/fa/LC_MESSAGES/R-base.mo +0 -0
  593. package/dist/vfs/usr/lib/R/library/translations/fa/LC_MESSAGES/R-utils.mo +0 -0
  594. package/dist/vfs/usr/lib/R/library/translations/fa/LC_MESSAGES/R.mo +0 -0
  595. package/dist/vfs/usr/lib/R/library/translations/fa/LC_MESSAGES/RGui.mo +0 -0
  596. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-base.mo +0 -0
  597. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-compiler.mo +0 -0
  598. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-grDevices.mo +0 -0
  599. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-graphics.mo +0 -0
  600. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-grid.mo +0 -0
  601. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-methods.mo +0 -0
  602. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-parallel.mo +0 -0
  603. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-splines.mo +0 -0
  604. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-stats.mo +0 -0
  605. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-stats4.mo +0 -0
  606. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-tcltk.mo +0 -0
  607. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-tools.mo +0 -0
  608. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R-utils.mo +0 -0
  609. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/R.mo +0 -0
  610. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/RGui.mo +0 -0
  611. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/grDevices.mo +0 -0
  612. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/graphics.mo +0 -0
  613. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/grid.mo +0 -0
  614. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/methods.mo +0 -0
  615. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/parallel.mo +0 -0
  616. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/splines.mo +0 -0
  617. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/stats.mo +0 -0
  618. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/tcltk.mo +0 -0
  619. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/tools.mo +0 -0
  620. package/dist/vfs/usr/lib/R/library/translations/fr/LC_MESSAGES/utils.mo +0 -0
  621. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-base.mo +0 -0
  622. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-compiler.mo +0 -0
  623. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-grDevices.mo +0 -0
  624. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-graphics.mo +0 -0
  625. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-grid.mo +0 -0
  626. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-methods.mo +0 -0
  627. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-parallel.mo +0 -0
  628. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-splines.mo +0 -0
  629. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-stats.mo +0 -0
  630. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-stats4.mo +0 -0
  631. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-tcltk.mo +0 -0
  632. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-tools.mo +0 -0
  633. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R-utils.mo +0 -0
  634. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/R.mo +0 -0
  635. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/RGui.mo +0 -0
  636. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/grDevices.mo +0 -0
  637. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/graphics.mo +0 -0
  638. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/grid.mo +0 -0
  639. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/methods.mo +0 -0
  640. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/parallel.mo +0 -0
  641. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/splines.mo +0 -0
  642. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/stats.mo +0 -0
  643. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/tcltk.mo +0 -0
  644. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/tools.mo +0 -0
  645. package/dist/vfs/usr/lib/R/library/translations/it/LC_MESSAGES/utils.mo +0 -0
  646. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R-base.mo +0 -0
  647. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R-compiler.mo +0 -0
  648. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R-grDevices.mo +0 -0
  649. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R-graphics.mo +0 -0
  650. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R-grid.mo +0 -0
  651. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R-methods.mo +0 -0
  652. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R-splines.mo +0 -0
  653. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R-stats.mo +0 -0
  654. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R-stats4.mo +0 -0
  655. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R-tcltk.mo +0 -0
  656. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R-tools.mo +0 -0
  657. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R-utils.mo +0 -0
  658. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/R.mo +0 -0
  659. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/RGui.mo +0 -0
  660. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/grDevices.mo +0 -0
  661. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/graphics.mo +0 -0
  662. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/grid.mo +0 -0
  663. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/methods.mo +0 -0
  664. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/splines.mo +0 -0
  665. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/stats.mo +0 -0
  666. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/tcltk.mo +0 -0
  667. package/dist/vfs/usr/lib/R/library/translations/ja/LC_MESSAGES/tools.mo +0 -0
  668. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-base.mo +0 -0
  669. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-compiler.mo +0 -0
  670. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-grDevices.mo +0 -0
  671. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-graphics.mo +0 -0
  672. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-grid.mo +0 -0
  673. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-methods.mo +0 -0
  674. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-parallel.mo +0 -0
  675. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-splines.mo +0 -0
  676. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-stats.mo +0 -0
  677. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-stats4.mo +0 -0
  678. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-tcltk.mo +0 -0
  679. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-tools.mo +0 -0
  680. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R-utils.mo +0 -0
  681. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/R.mo +0 -0
  682. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/RGui.mo +0 -0
  683. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/grDevices.mo +0 -0
  684. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/graphics.mo +0 -0
  685. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/grid.mo +0 -0
  686. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/methods.mo +0 -0
  687. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/parallel.mo +0 -0
  688. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/splines.mo +0 -0
  689. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/stats.mo +0 -0
  690. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/tcltk.mo +0 -0
  691. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/tools.mo +0 -0
  692. package/dist/vfs/usr/lib/R/library/translations/ko/LC_MESSAGES/utils.mo +0 -0
  693. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-base.mo +0 -0
  694. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-compiler.mo +0 -0
  695. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-grDevices.mo +0 -0
  696. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-graphics.mo +0 -0
  697. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-grid.mo +0 -0
  698. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-methods.mo +0 -0
  699. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-parallel.mo +0 -0
  700. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-splines.mo +0 -0
  701. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-stats.mo +0 -0
  702. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-stats4.mo +0 -0
  703. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-tcltk.mo +0 -0
  704. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-tools.mo +0 -0
  705. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R-utils.mo +0 -0
  706. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/R.mo +0 -0
  707. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/RGui.mo +0 -0
  708. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/grDevices.mo +0 -0
  709. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/graphics.mo +0 -0
  710. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/grid.mo +0 -0
  711. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/methods.mo +0 -0
  712. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/parallel.mo +0 -0
  713. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/splines.mo +0 -0
  714. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/stats.mo +0 -0
  715. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/tcltk.mo +0 -0
  716. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/tools.mo +0 -0
  717. package/dist/vfs/usr/lib/R/library/translations/lt/LC_MESSAGES/utils.mo +0 -0
  718. package/dist/vfs/usr/lib/R/library/translations/nn/LC_MESSAGES/R-base.mo +0 -0
  719. package/dist/vfs/usr/lib/R/library/translations/nn/LC_MESSAGES/R.mo +0 -0
  720. package/dist/vfs/usr/lib/R/library/translations/nn/LC_MESSAGES/RGui.mo +0 -0
  721. package/dist/vfs/usr/lib/R/library/translations/nn/LC_MESSAGES/graphics.mo +0 -0
  722. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-base.mo +0 -0
  723. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-compiler.mo +0 -0
  724. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-grDevices.mo +0 -0
  725. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-graphics.mo +0 -0
  726. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-grid.mo +0 -0
  727. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-methods.mo +0 -0
  728. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-parallel.mo +0 -0
  729. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-splines.mo +0 -0
  730. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-stats.mo +0 -0
  731. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-stats4.mo +0 -0
  732. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-tcltk.mo +0 -0
  733. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-tools.mo +0 -0
  734. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R-utils.mo +0 -0
  735. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/R.mo +0 -0
  736. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/RGui.mo +0 -0
  737. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/grDevices.mo +0 -0
  738. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/graphics.mo +0 -0
  739. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/grid.mo +0 -0
  740. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/methods.mo +0 -0
  741. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/parallel.mo +0 -0
  742. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/splines.mo +0 -0
  743. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/stats.mo +0 -0
  744. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/tcltk.mo +0 -0
  745. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/tools.mo +0 -0
  746. package/dist/vfs/usr/lib/R/library/translations/pl/LC_MESSAGES/utils.mo +0 -0
  747. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-base.mo +0 -0
  748. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-compiler.mo +0 -0
  749. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-grDevices.mo +0 -0
  750. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-graphics.mo +0 -0
  751. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-grid.mo +0 -0
  752. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-methods.mo +0 -0
  753. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-splines.mo +0 -0
  754. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-stats.mo +0 -0
  755. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-stats4.mo +0 -0
  756. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-tcltk.mo +0 -0
  757. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-tools.mo +0 -0
  758. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-utils.mo +0 -0
  759. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R.mo +0 -0
  760. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/RGui.mo +0 -0
  761. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/grDevices.mo +0 -0
  762. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/graphics.mo +0 -0
  763. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/grid.mo +0 -0
  764. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/methods.mo +0 -0
  765. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/splines.mo +0 -0
  766. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/stats.mo +0 -0
  767. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/tcltk.mo +0 -0
  768. package/dist/vfs/usr/lib/R/library/translations/pt_BR/LC_MESSAGES/tools.mo +0 -0
  769. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-base.mo +0 -0
  770. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-compiler.mo +0 -0
  771. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-grDevices.mo +0 -0
  772. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-graphics.mo +0 -0
  773. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-grid.mo +0 -0
  774. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-methods.mo +0 -0
  775. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-parallel.mo +0 -0
  776. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-splines.mo +0 -0
  777. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-stats.mo +0 -0
  778. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-stats4.mo +0 -0
  779. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-tcltk.mo +0 -0
  780. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-tools.mo +0 -0
  781. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R-utils.mo +0 -0
  782. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/R.mo +0 -0
  783. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/RGui.mo +0 -0
  784. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/grDevices.mo +0 -0
  785. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/graphics.mo +0 -0
  786. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/grid.mo +0 -0
  787. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/methods.mo +0 -0
  788. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/parallel.mo +0 -0
  789. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/splines.mo +0 -0
  790. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/stats.mo +0 -0
  791. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/tcltk.mo +0 -0
  792. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/tools.mo +0 -0
  793. package/dist/vfs/usr/lib/R/library/translations/ru/LC_MESSAGES/utils.mo +0 -0
  794. package/dist/vfs/usr/lib/R/library/translations/tr/LC_MESSAGES/R-base.mo +0 -0
  795. package/dist/vfs/usr/lib/R/library/translations/tr/LC_MESSAGES/R-stats.mo +0 -0
  796. package/dist/vfs/usr/lib/R/library/translations/tr/LC_MESSAGES/R-stats4.mo +0 -0
  797. package/dist/vfs/usr/lib/R/library/translations/tr/LC_MESSAGES/R-tools.mo +0 -0
  798. package/dist/vfs/usr/lib/R/library/translations/tr/LC_MESSAGES/R-utils.mo +0 -0
  799. package/dist/vfs/usr/lib/R/library/translations/tr/LC_MESSAGES/R.mo +0 -0
  800. package/dist/vfs/usr/lib/R/library/translations/tr/LC_MESSAGES/RGui.mo +0 -0
  801. package/dist/vfs/usr/lib/R/library/translations/tr/LC_MESSAGES/graphics.mo +0 -0
  802. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-base.mo +0 -0
  803. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-compiler.mo +0 -0
  804. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-grDevices.mo +0 -0
  805. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-graphics.mo +0 -0
  806. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-grid.mo +0 -0
  807. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-methods.mo +0 -0
  808. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-parallel.mo +0 -0
  809. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-splines.mo +0 -0
  810. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-stats.mo +0 -0
  811. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-stats4.mo +0 -0
  812. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-tcltk.mo +0 -0
  813. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-tools.mo +0 -0
  814. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-utils.mo +0 -0
  815. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R.mo +0 -0
  816. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/RGui.mo +0 -0
  817. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/grDevices.mo +0 -0
  818. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/graphics.mo +0 -0
  819. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/grid.mo +0 -0
  820. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/methods.mo +0 -0
  821. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/parallel.mo +0 -0
  822. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/splines.mo +0 -0
  823. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/stats.mo +0 -0
  824. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/tcltk.mo +0 -0
  825. package/dist/vfs/usr/lib/R/library/translations/zh_CN/LC_MESSAGES/tools.mo +0 -0
  826. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-base.mo +0 -0
  827. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-compiler.mo +0 -0
  828. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-grDevices.mo +0 -0
  829. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-graphics.mo +0 -0
  830. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-grid.mo +0 -0
  831. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-methods.mo +0 -0
  832. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-parallel.mo +0 -0
  833. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-splines.mo +0 -0
  834. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-stats.mo +0 -0
  835. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-stats4.mo +0 -0
  836. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-tcltk.mo +0 -0
  837. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-tools.mo +0 -0
  838. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R-utils.mo +0 -0
  839. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R.mo +0 -0
  840. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/RGui.mo +0 -0
  841. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/grDevices.mo +0 -0
  842. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/graphics.mo +0 -0
  843. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/grid.mo +0 -0
  844. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/methods.mo +0 -0
  845. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/parallel.mo +0 -0
  846. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/splines.mo +0 -0
  847. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/stats.mo +0 -0
  848. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/tcltk.mo +0 -0
  849. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/tools.mo +0 -0
  850. package/dist/vfs/usr/lib/R/library/translations/zh_TW/LC_MESSAGES/utils.mo +0 -0
  851. package/dist/vfs/usr/lib/R/library/utils/doc/Sweave.pdf +0 -0
  852. package/dist/vfs/usr/lib/R/library/utils/help/AnIndex +382 -0
  853. package/dist/vfs/usr/lib/R/library/utils/help/aliases.rds +0 -0
  854. package/dist/vfs/usr/lib/R/library/utils/help/paths.rds +0 -0
  855. package/dist/vfs/usr/lib/R/library/utils/help/utils.rdb +0 -0
  856. package/dist/vfs/usr/lib/R/library/utils/help/utils.rdx +0 -0
  857. package/dist/vfs/usr/lib/R/library/utils/html/00Index.html +802 -0
  858. package/dist/vfs/usr/lib/R/library/utils/html/R.css +130 -0
  859. package/dist/vfs/usr/lib/R/library/utils/misc/exDIF.csv +5 -0
  860. package/dist/vfs/usr/lib/R/library/utils/misc/exDIF.dif +44 -0
  861. package/dist/vfs/usr/lib/R/library/utils/tests/Sexpr-verb-ex.Rnw +44 -0
  862. package/dist/vfs/usr/lib/R/library/utils/tests/Sweave-tst.R +85 -0
  863. package/dist/vfs/usr/lib/R/library/utils/tests/charclass.R +97 -0
  864. package/dist/vfs/usr/lib/R/library/utils/tests/completion.R +37 -0
  865. package/dist/vfs/usr/lib/R/library/utils/tests/customgraphics.Rnw +20 -0
  866. package/dist/vfs/usr/lib/R/library/utils/tests/download.file.R +170 -0
  867. package/dist/vfs/usr/lib/R/library/utils/tests/keepsource.Rnw +12 -0
  868. package/dist/vfs/usr/lib/R/library/utils/tests/relist.R +24 -0
  869. package/dist/vfs/usr/lib/R/library/utils/tests/swv-keepSrc-1.Rnw +48 -0
  870. package/dist/vfs/usr/lib/R/modules/internet.so +0 -0
  871. package/dist/vfs/usr/lib/R/modules/lapack.so +0 -0
  872. package/dist/vfs/usr/lib/R/share/R/REMOVE.R +82 -0
  873. package/dist/vfs/usr/lib/R/share/R/examples-footer.R +12 -0
  874. package/dist/vfs/usr/lib/R/share/R/examples-header.R +85 -0
  875. package/dist/vfs/usr/lib/R/share/R/nspackloader.R +27 -0
  876. package/dist/vfs/usr/lib/R/share/R/tests-startup.R +4 -0
  877. package/dist/vfs/usr/lib/R/share/Rd/macros/system.Rd +56 -0
  878. package/dist/vfs/usr/lib/R/share/dictionaries/en_stats.rds +0 -0
  879. package/dist/vfs/usr/lib/R/share/encodings/Adobe-glyphlist +4200 -0
  880. package/dist/vfs/usr/lib/R/share/encodings/character-sets +1900 -0
  881. package/dist/vfs/usr/lib/R/share/java/README +3 -0
  882. package/dist/vfs/usr/lib/R/share/java/getsp.class +0 -0
  883. package/dist/vfs/usr/lib/R/share/licenses/AGPL-3 +661 -0
  884. package/dist/vfs/usr/lib/R/share/licenses/Artistic-2.0 +197 -0
  885. package/dist/vfs/usr/lib/R/share/licenses/BSD_2_clause +40 -0
  886. package/dist/vfs/usr/lib/R/share/licenses/BSD_3_clause +46 -0
  887. package/dist/vfs/usr/lib/R/share/licenses/GPL-2 +339 -0
  888. package/dist/vfs/usr/lib/R/share/licenses/GPL-3 +674 -0
  889. package/dist/vfs/usr/lib/R/share/licenses/LGPL-2 +481 -0
  890. package/dist/vfs/usr/lib/R/share/licenses/LGPL-2.1 +502 -0
  891. package/dist/vfs/usr/lib/R/share/licenses/LGPL-3 +165 -0
  892. package/dist/vfs/usr/lib/R/share/licenses/MIT +35 -0
  893. package/dist/vfs/usr/lib/R/share/licenses/license.db +268 -0
  894. package/dist/vfs/usr/lib/R/share/make/basepkg.mk +207 -0
  895. package/dist/vfs/usr/lib/R/share/make/check_vars_ini.mk +18 -0
  896. package/dist/vfs/usr/lib/R/share/make/check_vars_out.mk +22 -0
  897. package/dist/vfs/usr/lib/R/share/make/clean.mk +2 -0
  898. package/dist/vfs/usr/lib/R/share/make/config.mk +6 -0
  899. package/dist/vfs/usr/lib/R/share/make/lazycomp.mk +23 -0
  900. package/dist/vfs/usr/lib/R/share/make/shlib.mk +30 -0
  901. package/dist/vfs/usr/lib/R/share/make/vars.mk +14 -0
  902. package/dist/vfs/usr/lib/R/share/make/winshlib.mk +41 -0
  903. package/dist/vfs/usr/lib/R/share/sh/echo.sh +4 -0
  904. package/dist/vfs/usr/lib/R/share/texmf/bibtex/bib/RJournal.bib +10345 -0
  905. package/dist/vfs/usr/lib/R/share/texmf/bibtex/bib/Rnews.bib +2733 -0
  906. package/dist/vfs/usr/lib/R/share/texmf/bibtex/bst/jss.bst +1653 -0
  907. package/dist/vfs/usr/lib/R/share/texmf/tex/latex/Rd.sty +450 -0
  908. package/dist/vfs/usr/lib/R/share/texmf/tex/latex/Sweave.sty +59 -0
  909. package/dist/vfs/usr/lib/R/share/texmf/tex/latex/jss.cls +490 -0
  910. package/dist/vfs/usr/lib/R/share/texmf/tex/latex/omscmtt.fd +21 -0
  911. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Abidjan +0 -0
  912. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Accra +0 -0
  913. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Addis_Ababa +0 -0
  914. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Algiers +0 -0
  915. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Asmara +0 -0
  916. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Asmera +0 -0
  917. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Bamako +0 -0
  918. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Bangui +0 -0
  919. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Banjul +0 -0
  920. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Bissau +0 -0
  921. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Blantyre +0 -0
  922. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Brazzaville +0 -0
  923. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Bujumbura +0 -0
  924. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Cairo +0 -0
  925. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Casablanca +0 -0
  926. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Ceuta +0 -0
  927. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Conakry +0 -0
  928. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Dakar +0 -0
  929. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Dar_es_Salaam +0 -0
  930. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Djibouti +0 -0
  931. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Douala +0 -0
  932. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/El_Aaiun +0 -0
  933. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Freetown +0 -0
  934. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Gaborone +0 -0
  935. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Harare +0 -0
  936. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Johannesburg +0 -0
  937. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Juba +0 -0
  938. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Kampala +0 -0
  939. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Khartoum +0 -0
  940. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Kigali +0 -0
  941. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Kinshasa +0 -0
  942. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Lagos +0 -0
  943. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Libreville +0 -0
  944. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Lome +0 -0
  945. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Luanda +0 -0
  946. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Lubumbashi +0 -0
  947. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Lusaka +0 -0
  948. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Malabo +0 -0
  949. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Maputo +0 -0
  950. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Maseru +0 -0
  951. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Mbabane +0 -0
  952. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Mogadishu +0 -0
  953. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Monrovia +0 -0
  954. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Nairobi +0 -0
  955. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Ndjamena +0 -0
  956. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Niamey +0 -0
  957. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Nouakchott +0 -0
  958. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Ouagadougou +0 -0
  959. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Porto-Novo +0 -0
  960. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Sao_Tome +0 -0
  961. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Timbuktu +0 -0
  962. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Tripoli +0 -0
  963. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Tunis +0 -0
  964. package/dist/vfs/usr/lib/R/share/zoneinfo/Africa/Windhoek +0 -0
  965. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Adak +0 -0
  966. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Anchorage +0 -0
  967. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Anguilla +0 -0
  968. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Antigua +0 -0
  969. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Araguaina +0 -0
  970. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/Buenos_Aires +0 -0
  971. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/Catamarca +0 -0
  972. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/ComodRivadavia +0 -0
  973. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/Cordoba +0 -0
  974. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/Jujuy +0 -0
  975. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/La_Rioja +0 -0
  976. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/Mendoza +0 -0
  977. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/Rio_Gallegos +0 -0
  978. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/Salta +0 -0
  979. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/San_Juan +0 -0
  980. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/San_Luis +0 -0
  981. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/Tucuman +0 -0
  982. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Argentina/Ushuaia +0 -0
  983. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Aruba +0 -0
  984. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Asuncion +0 -0
  985. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Atikokan +0 -0
  986. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Atka +0 -0
  987. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Bahia +0 -0
  988. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Bahia_Banderas +0 -0
  989. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Barbados +0 -0
  990. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Belem +0 -0
  991. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Belize +0 -0
  992. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Blanc-Sablon +0 -0
  993. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Boa_Vista +0 -0
  994. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Bogota +0 -0
  995. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Boise +0 -0
  996. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Buenos_Aires +0 -0
  997. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Cambridge_Bay +0 -0
  998. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Campo_Grande +0 -0
  999. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Cancun +0 -0
  1000. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Caracas +0 -0
  1001. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Catamarca +0 -0
  1002. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Cayenne +0 -0
  1003. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Cayman +0 -0
  1004. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Chicago +0 -0
  1005. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Chihuahua +0 -0
  1006. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Ciudad_Juarez +0 -0
  1007. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Coral_Harbour +0 -0
  1008. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Cordoba +0 -0
  1009. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Costa_Rica +0 -0
  1010. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Creston +0 -0
  1011. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Cuiaba +0 -0
  1012. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Curacao +0 -0
  1013. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Danmarkshavn +0 -0
  1014. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Dawson +0 -0
  1015. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Dawson_Creek +0 -0
  1016. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Denver +0 -0
  1017. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Detroit +0 -0
  1018. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Dominica +0 -0
  1019. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Edmonton +0 -0
  1020. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Eirunepe +0 -0
  1021. package/dist/vfs/usr/lib/R/share/zoneinfo/America/El_Salvador +0 -0
  1022. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Ensenada +0 -0
  1023. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Fort_Nelson +0 -0
  1024. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Fort_Wayne +0 -0
  1025. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Fortaleza +0 -0
  1026. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Glace_Bay +0 -0
  1027. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Godthab +0 -0
  1028. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Goose_Bay +0 -0
  1029. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Grand_Turk +0 -0
  1030. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Grenada +0 -0
  1031. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Guadeloupe +0 -0
  1032. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Guatemala +0 -0
  1033. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Guayaquil +0 -0
  1034. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Guyana +0 -0
  1035. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Halifax +0 -0
  1036. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Havana +0 -0
  1037. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Hermosillo +0 -0
  1038. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Indiana/Indianapolis +0 -0
  1039. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Indiana/Knox +0 -0
  1040. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Indiana/Marengo +0 -0
  1041. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Indiana/Petersburg +0 -0
  1042. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Indiana/Tell_City +0 -0
  1043. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Indiana/Vevay +0 -0
  1044. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Indiana/Vincennes +0 -0
  1045. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Indiana/Winamac +0 -0
  1046. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Indianapolis +0 -0
  1047. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Inuvik +0 -0
  1048. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Iqaluit +0 -0
  1049. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Jamaica +0 -0
  1050. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Jujuy +0 -0
  1051. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Juneau +0 -0
  1052. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Kentucky/Louisville +0 -0
  1053. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Kentucky/Monticello +0 -0
  1054. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Knox_IN +0 -0
  1055. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Kralendijk +0 -0
  1056. package/dist/vfs/usr/lib/R/share/zoneinfo/America/La_Paz +0 -0
  1057. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Lima +0 -0
  1058. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Los_Angeles +0 -0
  1059. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Louisville +0 -0
  1060. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Lower_Princes +0 -0
  1061. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Maceio +0 -0
  1062. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Managua +0 -0
  1063. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Manaus +0 -0
  1064. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Marigot +0 -0
  1065. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Martinique +0 -0
  1066. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Matamoros +0 -0
  1067. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Mazatlan +0 -0
  1068. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Mendoza +0 -0
  1069. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Menominee +0 -0
  1070. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Merida +0 -0
  1071. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Metlakatla +0 -0
  1072. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Mexico_City +0 -0
  1073. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Miquelon +0 -0
  1074. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Moncton +0 -0
  1075. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Monterrey +0 -0
  1076. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Montevideo +0 -0
  1077. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Montreal +0 -0
  1078. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Montserrat +0 -0
  1079. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Nassau +0 -0
  1080. package/dist/vfs/usr/lib/R/share/zoneinfo/America/New_York +0 -0
  1081. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Nipigon +0 -0
  1082. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Nome +0 -0
  1083. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Noronha +0 -0
  1084. package/dist/vfs/usr/lib/R/share/zoneinfo/America/North_Dakota/Beulah +0 -0
  1085. package/dist/vfs/usr/lib/R/share/zoneinfo/America/North_Dakota/Center +0 -0
  1086. package/dist/vfs/usr/lib/R/share/zoneinfo/America/North_Dakota/New_Salem +0 -0
  1087. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Nuuk +0 -0
  1088. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Ojinaga +0 -0
  1089. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Panama +0 -0
  1090. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Pangnirtung +0 -0
  1091. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Paramaribo +0 -0
  1092. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Phoenix +0 -0
  1093. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Port-au-Prince +0 -0
  1094. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Port_of_Spain +0 -0
  1095. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Porto_Acre +0 -0
  1096. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Porto_Velho +0 -0
  1097. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Puerto_Rico +0 -0
  1098. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Punta_Arenas +0 -0
  1099. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Rainy_River +0 -0
  1100. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Rankin_Inlet +0 -0
  1101. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Recife +0 -0
  1102. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Regina +0 -0
  1103. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Resolute +0 -0
  1104. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Rio_Branco +0 -0
  1105. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Rosario +0 -0
  1106. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Santa_Isabel +0 -0
  1107. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Santarem +0 -0
  1108. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Santiago +0 -0
  1109. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Santo_Domingo +0 -0
  1110. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Sao_Paulo +0 -0
  1111. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Scoresbysund +0 -0
  1112. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Shiprock +0 -0
  1113. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Sitka +0 -0
  1114. package/dist/vfs/usr/lib/R/share/zoneinfo/America/St_Barthelemy +0 -0
  1115. package/dist/vfs/usr/lib/R/share/zoneinfo/America/St_Johns +0 -0
  1116. package/dist/vfs/usr/lib/R/share/zoneinfo/America/St_Kitts +0 -0
  1117. package/dist/vfs/usr/lib/R/share/zoneinfo/America/St_Lucia +0 -0
  1118. package/dist/vfs/usr/lib/R/share/zoneinfo/America/St_Thomas +0 -0
  1119. package/dist/vfs/usr/lib/R/share/zoneinfo/America/St_Vincent +0 -0
  1120. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Swift_Current +0 -0
  1121. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Tegucigalpa +0 -0
  1122. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Thule +0 -0
  1123. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Thunder_Bay +0 -0
  1124. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Tijuana +0 -0
  1125. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Toronto +0 -0
  1126. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Tortola +0 -0
  1127. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Vancouver +0 -0
  1128. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Virgin +0 -0
  1129. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Whitehorse +0 -0
  1130. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Winnipeg +0 -0
  1131. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Yakutat +0 -0
  1132. package/dist/vfs/usr/lib/R/share/zoneinfo/America/Yellowknife +0 -0
  1133. package/dist/vfs/usr/lib/R/share/zoneinfo/Antarctica/Casey +0 -0
  1134. package/dist/vfs/usr/lib/R/share/zoneinfo/Antarctica/Davis +0 -0
  1135. package/dist/vfs/usr/lib/R/share/zoneinfo/Antarctica/DumontDUrville +0 -0
  1136. package/dist/vfs/usr/lib/R/share/zoneinfo/Antarctica/Macquarie +0 -0
  1137. package/dist/vfs/usr/lib/R/share/zoneinfo/Antarctica/Mawson +0 -0
  1138. package/dist/vfs/usr/lib/R/share/zoneinfo/Antarctica/McMurdo +0 -0
  1139. package/dist/vfs/usr/lib/R/share/zoneinfo/Antarctica/Palmer +0 -0
  1140. package/dist/vfs/usr/lib/R/share/zoneinfo/Antarctica/Rothera +0 -0
  1141. package/dist/vfs/usr/lib/R/share/zoneinfo/Antarctica/South_Pole +0 -0
  1142. package/dist/vfs/usr/lib/R/share/zoneinfo/Antarctica/Syowa +0 -0
  1143. package/dist/vfs/usr/lib/R/share/zoneinfo/Antarctica/Troll +0 -0
  1144. package/dist/vfs/usr/lib/R/share/zoneinfo/Antarctica/Vostok +0 -0
  1145. package/dist/vfs/usr/lib/R/share/zoneinfo/Arctic/Longyearbyen +0 -0
  1146. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Aden +0 -0
  1147. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Almaty +0 -0
  1148. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Amman +0 -0
  1149. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Anadyr +0 -0
  1150. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Aqtau +0 -0
  1151. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Aqtobe +0 -0
  1152. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Ashgabat +0 -0
  1153. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Ashkhabad +0 -0
  1154. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Atyrau +0 -0
  1155. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Baghdad +0 -0
  1156. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Bahrain +0 -0
  1157. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Baku +0 -0
  1158. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Bangkok +0 -0
  1159. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Barnaul +0 -0
  1160. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Beirut +0 -0
  1161. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Bishkek +0 -0
  1162. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Brunei +0 -0
  1163. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Calcutta +0 -0
  1164. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Chita +0 -0
  1165. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Choibalsan +0 -0
  1166. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Chongqing +0 -0
  1167. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Chungking +0 -0
  1168. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Colombo +0 -0
  1169. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Dacca +0 -0
  1170. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Damascus +0 -0
  1171. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Dhaka +0 -0
  1172. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Dili +0 -0
  1173. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Dubai +0 -0
  1174. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Dushanbe +0 -0
  1175. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Famagusta +0 -0
  1176. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Gaza +0 -0
  1177. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Harbin +0 -0
  1178. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Hebron +0 -0
  1179. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Ho_Chi_Minh +0 -0
  1180. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Hong_Kong +0 -0
  1181. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Hovd +0 -0
  1182. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Irkutsk +0 -0
  1183. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Istanbul +0 -0
  1184. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Jakarta +0 -0
  1185. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Jayapura +0 -0
  1186. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Jerusalem +0 -0
  1187. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Kabul +0 -0
  1188. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Kamchatka +0 -0
  1189. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Karachi +0 -0
  1190. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Kashgar +0 -0
  1191. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Kathmandu +0 -0
  1192. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Katmandu +0 -0
  1193. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Khandyga +0 -0
  1194. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Kolkata +0 -0
  1195. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Krasnoyarsk +0 -0
  1196. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Kuala_Lumpur +0 -0
  1197. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Kuching +0 -0
  1198. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Kuwait +0 -0
  1199. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Macao +0 -0
  1200. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Macau +0 -0
  1201. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Magadan +0 -0
  1202. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Makassar +0 -0
  1203. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Manila +0 -0
  1204. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Muscat +0 -0
  1205. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Nicosia +0 -0
  1206. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Novokuznetsk +0 -0
  1207. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Novosibirsk +0 -0
  1208. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Omsk +0 -0
  1209. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Oral +0 -0
  1210. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Phnom_Penh +0 -0
  1211. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Pontianak +0 -0
  1212. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Pyongyang +0 -0
  1213. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Qatar +0 -0
  1214. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Qostanay +0 -0
  1215. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Qyzylorda +0 -0
  1216. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Rangoon +0 -0
  1217. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Riyadh +0 -0
  1218. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Saigon +0 -0
  1219. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Sakhalin +0 -0
  1220. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Samarkand +0 -0
  1221. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Seoul +0 -0
  1222. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Shanghai +0 -0
  1223. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Singapore +0 -0
  1224. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Srednekolymsk +0 -0
  1225. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Taipei +0 -0
  1226. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Tashkent +0 -0
  1227. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Tbilisi +0 -0
  1228. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Tehran +0 -0
  1229. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Tel_Aviv +0 -0
  1230. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Thimbu +0 -0
  1231. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Thimphu +0 -0
  1232. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Tokyo +0 -0
  1233. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Tomsk +0 -0
  1234. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Ujung_Pandang +0 -0
  1235. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Ulaanbaatar +0 -0
  1236. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Ulan_Bator +0 -0
  1237. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Urumqi +0 -0
  1238. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Ust-Nera +0 -0
  1239. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Vientiane +0 -0
  1240. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Vladivostok +0 -0
  1241. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Yakutsk +0 -0
  1242. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Yangon +0 -0
  1243. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Yekaterinburg +0 -0
  1244. package/dist/vfs/usr/lib/R/share/zoneinfo/Asia/Yerevan +0 -0
  1245. package/dist/vfs/usr/lib/R/share/zoneinfo/Atlantic/Azores +0 -0
  1246. package/dist/vfs/usr/lib/R/share/zoneinfo/Atlantic/Bermuda +0 -0
  1247. package/dist/vfs/usr/lib/R/share/zoneinfo/Atlantic/Canary +0 -0
  1248. package/dist/vfs/usr/lib/R/share/zoneinfo/Atlantic/Cape_Verde +0 -0
  1249. package/dist/vfs/usr/lib/R/share/zoneinfo/Atlantic/Faeroe +0 -0
  1250. package/dist/vfs/usr/lib/R/share/zoneinfo/Atlantic/Faroe +0 -0
  1251. package/dist/vfs/usr/lib/R/share/zoneinfo/Atlantic/Jan_Mayen +0 -0
  1252. package/dist/vfs/usr/lib/R/share/zoneinfo/Atlantic/Madeira +0 -0
  1253. package/dist/vfs/usr/lib/R/share/zoneinfo/Atlantic/Reykjavik +0 -0
  1254. package/dist/vfs/usr/lib/R/share/zoneinfo/Atlantic/South_Georgia +0 -0
  1255. package/dist/vfs/usr/lib/R/share/zoneinfo/Atlantic/St_Helena +0 -0
  1256. package/dist/vfs/usr/lib/R/share/zoneinfo/Atlantic/Stanley +0 -0
  1257. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/ACT +0 -0
  1258. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Adelaide +0 -0
  1259. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Brisbane +0 -0
  1260. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Broken_Hill +0 -0
  1261. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Canberra +0 -0
  1262. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Currie +0 -0
  1263. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Darwin +0 -0
  1264. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Eucla +0 -0
  1265. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Hobart +0 -0
  1266. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/LHI +0 -0
  1267. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Lindeman +0 -0
  1268. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Lord_Howe +0 -0
  1269. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Melbourne +0 -0
  1270. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/NSW +0 -0
  1271. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/North +0 -0
  1272. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Perth +0 -0
  1273. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Queensland +0 -0
  1274. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/South +0 -0
  1275. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Sydney +0 -0
  1276. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Tasmania +0 -0
  1277. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Victoria +0 -0
  1278. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/West +0 -0
  1279. package/dist/vfs/usr/lib/R/share/zoneinfo/Australia/Yancowinna +0 -0
  1280. package/dist/vfs/usr/lib/R/share/zoneinfo/Brazil/Acre +0 -0
  1281. package/dist/vfs/usr/lib/R/share/zoneinfo/Brazil/DeNoronha +0 -0
  1282. package/dist/vfs/usr/lib/R/share/zoneinfo/Brazil/East +0 -0
  1283. package/dist/vfs/usr/lib/R/share/zoneinfo/Brazil/West +0 -0
  1284. package/dist/vfs/usr/lib/R/share/zoneinfo/CET +0 -0
  1285. package/dist/vfs/usr/lib/R/share/zoneinfo/CST6CDT +0 -0
  1286. package/dist/vfs/usr/lib/R/share/zoneinfo/Canada/Atlantic +0 -0
  1287. package/dist/vfs/usr/lib/R/share/zoneinfo/Canada/Central +0 -0
  1288. package/dist/vfs/usr/lib/R/share/zoneinfo/Canada/Eastern +0 -0
  1289. package/dist/vfs/usr/lib/R/share/zoneinfo/Canada/Mountain +0 -0
  1290. package/dist/vfs/usr/lib/R/share/zoneinfo/Canada/Newfoundland +0 -0
  1291. package/dist/vfs/usr/lib/R/share/zoneinfo/Canada/Pacific +0 -0
  1292. package/dist/vfs/usr/lib/R/share/zoneinfo/Canada/Saskatchewan +0 -0
  1293. package/dist/vfs/usr/lib/R/share/zoneinfo/Canada/Yukon +0 -0
  1294. package/dist/vfs/usr/lib/R/share/zoneinfo/Chile/Continental +0 -0
  1295. package/dist/vfs/usr/lib/R/share/zoneinfo/Chile/EasterIsland +0 -0
  1296. package/dist/vfs/usr/lib/R/share/zoneinfo/Cuba +0 -0
  1297. package/dist/vfs/usr/lib/R/share/zoneinfo/EET +0 -0
  1298. package/dist/vfs/usr/lib/R/share/zoneinfo/EST +0 -0
  1299. package/dist/vfs/usr/lib/R/share/zoneinfo/EST5EDT +0 -0
  1300. package/dist/vfs/usr/lib/R/share/zoneinfo/Egypt +0 -0
  1301. package/dist/vfs/usr/lib/R/share/zoneinfo/Eire +0 -0
  1302. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT +0 -0
  1303. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+0 +0 -0
  1304. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+1 +0 -0
  1305. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+10 +0 -0
  1306. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+11 +0 -0
  1307. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+12 +0 -0
  1308. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+2 +0 -0
  1309. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+3 +0 -0
  1310. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+4 +0 -0
  1311. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+5 +0 -0
  1312. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+6 +0 -0
  1313. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+7 +0 -0
  1314. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+8 +0 -0
  1315. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT+9 +0 -0
  1316. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-0 +0 -0
  1317. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-1 +0 -0
  1318. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-10 +0 -0
  1319. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-11 +0 -0
  1320. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-12 +0 -0
  1321. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-13 +0 -0
  1322. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-14 +0 -0
  1323. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-2 +0 -0
  1324. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-3 +0 -0
  1325. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-4 +0 -0
  1326. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-5 +0 -0
  1327. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-6 +0 -0
  1328. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-7 +0 -0
  1329. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-8 +0 -0
  1330. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT-9 +0 -0
  1331. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/GMT0 +0 -0
  1332. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/Greenwich +0 -0
  1333. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/UCT +0 -0
  1334. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/UTC +0 -0
  1335. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/Universal +0 -0
  1336. package/dist/vfs/usr/lib/R/share/zoneinfo/Etc/Zulu +0 -0
  1337. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Amsterdam +0 -0
  1338. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Andorra +0 -0
  1339. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Astrakhan +0 -0
  1340. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Athens +0 -0
  1341. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Belfast +0 -0
  1342. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Belgrade +0 -0
  1343. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Berlin +0 -0
  1344. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Bratislava +0 -0
  1345. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Brussels +0 -0
  1346. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Bucharest +0 -0
  1347. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Budapest +0 -0
  1348. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Busingen +0 -0
  1349. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Chisinau +0 -0
  1350. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Copenhagen +0 -0
  1351. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Dublin +0 -0
  1352. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Gibraltar +0 -0
  1353. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Guernsey +0 -0
  1354. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Helsinki +0 -0
  1355. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Isle_of_Man +0 -0
  1356. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Istanbul +0 -0
  1357. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Jersey +0 -0
  1358. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Kaliningrad +0 -0
  1359. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Kiev +0 -0
  1360. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Kirov +0 -0
  1361. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Kyiv +0 -0
  1362. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Lisbon +0 -0
  1363. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Ljubljana +0 -0
  1364. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/London +0 -0
  1365. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Luxembourg +0 -0
  1366. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Madrid +0 -0
  1367. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Malta +0 -0
  1368. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Mariehamn +0 -0
  1369. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Minsk +0 -0
  1370. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Monaco +0 -0
  1371. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Moscow +0 -0
  1372. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Nicosia +0 -0
  1373. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Oslo +0 -0
  1374. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Paris +0 -0
  1375. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Podgorica +0 -0
  1376. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Prague +0 -0
  1377. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Riga +0 -0
  1378. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Rome +0 -0
  1379. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Samara +0 -0
  1380. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/San_Marino +0 -0
  1381. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Sarajevo +0 -0
  1382. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Saratov +0 -0
  1383. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Simferopol +0 -0
  1384. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Skopje +0 -0
  1385. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Sofia +0 -0
  1386. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Stockholm +0 -0
  1387. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Tallinn +0 -0
  1388. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Tirane +0 -0
  1389. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Tiraspol +0 -0
  1390. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Ulyanovsk +0 -0
  1391. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Uzhgorod +0 -0
  1392. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Vaduz +0 -0
  1393. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Vatican +0 -0
  1394. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Vienna +0 -0
  1395. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Vilnius +0 -0
  1396. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Volgograd +0 -0
  1397. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Warsaw +0 -0
  1398. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Zagreb +0 -0
  1399. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Zaporozhye +0 -0
  1400. package/dist/vfs/usr/lib/R/share/zoneinfo/Europe/Zurich +0 -0
  1401. package/dist/vfs/usr/lib/R/share/zoneinfo/GB +0 -0
  1402. package/dist/vfs/usr/lib/R/share/zoneinfo/GB-Eire +0 -0
  1403. package/dist/vfs/usr/lib/R/share/zoneinfo/GMT +0 -0
  1404. package/dist/vfs/usr/lib/R/share/zoneinfo/GMT+0 +0 -0
  1405. package/dist/vfs/usr/lib/R/share/zoneinfo/GMT-0 +0 -0
  1406. package/dist/vfs/usr/lib/R/share/zoneinfo/GMT0 +0 -0
  1407. package/dist/vfs/usr/lib/R/share/zoneinfo/Greenwich +0 -0
  1408. package/dist/vfs/usr/lib/R/share/zoneinfo/HST +0 -0
  1409. package/dist/vfs/usr/lib/R/share/zoneinfo/Hongkong +0 -0
  1410. package/dist/vfs/usr/lib/R/share/zoneinfo/Iceland +0 -0
  1411. package/dist/vfs/usr/lib/R/share/zoneinfo/Indian/Antananarivo +0 -0
  1412. package/dist/vfs/usr/lib/R/share/zoneinfo/Indian/Chagos +0 -0
  1413. package/dist/vfs/usr/lib/R/share/zoneinfo/Indian/Christmas +0 -0
  1414. package/dist/vfs/usr/lib/R/share/zoneinfo/Indian/Cocos +0 -0
  1415. package/dist/vfs/usr/lib/R/share/zoneinfo/Indian/Comoro +0 -0
  1416. package/dist/vfs/usr/lib/R/share/zoneinfo/Indian/Kerguelen +0 -0
  1417. package/dist/vfs/usr/lib/R/share/zoneinfo/Indian/Mahe +0 -0
  1418. package/dist/vfs/usr/lib/R/share/zoneinfo/Indian/Maldives +0 -0
  1419. package/dist/vfs/usr/lib/R/share/zoneinfo/Indian/Mauritius +0 -0
  1420. package/dist/vfs/usr/lib/R/share/zoneinfo/Indian/Mayotte +0 -0
  1421. package/dist/vfs/usr/lib/R/share/zoneinfo/Indian/Reunion +0 -0
  1422. package/dist/vfs/usr/lib/R/share/zoneinfo/Iran +0 -0
  1423. package/dist/vfs/usr/lib/R/share/zoneinfo/Israel +0 -0
  1424. package/dist/vfs/usr/lib/R/share/zoneinfo/Jamaica +0 -0
  1425. package/dist/vfs/usr/lib/R/share/zoneinfo/Japan +0 -0
  1426. package/dist/vfs/usr/lib/R/share/zoneinfo/Kwajalein +0 -0
  1427. package/dist/vfs/usr/lib/R/share/zoneinfo/Libya +0 -0
  1428. package/dist/vfs/usr/lib/R/share/zoneinfo/MET +0 -0
  1429. package/dist/vfs/usr/lib/R/share/zoneinfo/MST +0 -0
  1430. package/dist/vfs/usr/lib/R/share/zoneinfo/MST7MDT +0 -0
  1431. package/dist/vfs/usr/lib/R/share/zoneinfo/Mexico/BajaNorte +0 -0
  1432. package/dist/vfs/usr/lib/R/share/zoneinfo/Mexico/BajaSur +0 -0
  1433. package/dist/vfs/usr/lib/R/share/zoneinfo/Mexico/General +0 -0
  1434. package/dist/vfs/usr/lib/R/share/zoneinfo/NZ +0 -0
  1435. package/dist/vfs/usr/lib/R/share/zoneinfo/NZ-CHAT +0 -0
  1436. package/dist/vfs/usr/lib/R/share/zoneinfo/Navajo +0 -0
  1437. package/dist/vfs/usr/lib/R/share/zoneinfo/PRC +0 -0
  1438. package/dist/vfs/usr/lib/R/share/zoneinfo/PST8PDT +0 -0
  1439. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Apia +0 -0
  1440. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Auckland +0 -0
  1441. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Bougainville +0 -0
  1442. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Chatham +0 -0
  1443. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Chuuk +0 -0
  1444. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Easter +0 -0
  1445. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Efate +0 -0
  1446. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Enderbury +0 -0
  1447. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Fakaofo +0 -0
  1448. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Fiji +0 -0
  1449. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Funafuti +0 -0
  1450. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Galapagos +0 -0
  1451. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Gambier +0 -0
  1452. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Guadalcanal +0 -0
  1453. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Guam +0 -0
  1454. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Honolulu +0 -0
  1455. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Johnston +0 -0
  1456. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Kanton +0 -0
  1457. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Kiritimati +0 -0
  1458. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Kosrae +0 -0
  1459. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Kwajalein +0 -0
  1460. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Majuro +0 -0
  1461. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Marquesas +0 -0
  1462. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Midway +0 -0
  1463. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Nauru +0 -0
  1464. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Niue +0 -0
  1465. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Norfolk +0 -0
  1466. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Noumea +0 -0
  1467. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Pago_Pago +0 -0
  1468. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Palau +0 -0
  1469. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Pitcairn +0 -0
  1470. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Pohnpei +0 -0
  1471. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Ponape +0 -0
  1472. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Port_Moresby +0 -0
  1473. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Rarotonga +0 -0
  1474. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Saipan +0 -0
  1475. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Samoa +0 -0
  1476. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Tahiti +0 -0
  1477. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Tarawa +0 -0
  1478. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Tongatapu +0 -0
  1479. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Truk +0 -0
  1480. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Wake +0 -0
  1481. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Wallis +0 -0
  1482. package/dist/vfs/usr/lib/R/share/zoneinfo/Pacific/Yap +0 -0
  1483. package/dist/vfs/usr/lib/R/share/zoneinfo/Poland +0 -0
  1484. package/dist/vfs/usr/lib/R/share/zoneinfo/Portugal +0 -0
  1485. package/dist/vfs/usr/lib/R/share/zoneinfo/ROC +0 -0
  1486. package/dist/vfs/usr/lib/R/share/zoneinfo/ROK +0 -0
  1487. package/dist/vfs/usr/lib/R/share/zoneinfo/Singapore +0 -0
  1488. package/dist/vfs/usr/lib/R/share/zoneinfo/Turkey +0 -0
  1489. package/dist/vfs/usr/lib/R/share/zoneinfo/UCT +0 -0
  1490. package/dist/vfs/usr/lib/R/share/zoneinfo/US/Alaska +0 -0
  1491. package/dist/vfs/usr/lib/R/share/zoneinfo/US/Aleutian +0 -0
  1492. package/dist/vfs/usr/lib/R/share/zoneinfo/US/Arizona +0 -0
  1493. package/dist/vfs/usr/lib/R/share/zoneinfo/US/Central +0 -0
  1494. package/dist/vfs/usr/lib/R/share/zoneinfo/US/East-Indiana +0 -0
  1495. package/dist/vfs/usr/lib/R/share/zoneinfo/US/Eastern +0 -0
  1496. package/dist/vfs/usr/lib/R/share/zoneinfo/US/Hawaii +0 -0
  1497. package/dist/vfs/usr/lib/R/share/zoneinfo/US/Indiana-Starke +0 -0
  1498. package/dist/vfs/usr/lib/R/share/zoneinfo/US/Michigan +0 -0
  1499. package/dist/vfs/usr/lib/R/share/zoneinfo/US/Mountain +0 -0
  1500. package/dist/vfs/usr/lib/R/share/zoneinfo/US/Pacific +0 -0
  1501. package/dist/vfs/usr/lib/R/share/zoneinfo/US/Samoa +0 -0
  1502. package/dist/vfs/usr/lib/R/share/zoneinfo/UTC +0 -0
  1503. package/dist/vfs/usr/lib/R/share/zoneinfo/Universal +0 -0
  1504. package/dist/vfs/usr/lib/R/share/zoneinfo/VERSION +1 -0
  1505. package/dist/vfs/usr/lib/R/share/zoneinfo/W-SU +0 -0
  1506. package/dist/vfs/usr/lib/R/share/zoneinfo/WET +0 -0
  1507. package/dist/vfs/usr/lib/R/share/zoneinfo/Zulu +0 -0
  1508. package/dist/vfs/usr/lib/R/share/zoneinfo/iso3166.tab +274 -0
  1509. package/dist/vfs/usr/lib/R/share/zoneinfo/zone.tab +448 -0
  1510. package/dist/vfs/usr/lib/R/share/zoneinfo/zone1970.tab +374 -0
  1511. package/dist/vfs/usr/lib/R/tests/CRANtools.R +35 -0
  1512. package/dist/vfs/usr/lib/R/tests/EmbeddedNuls.csv +0 -0
  1513. package/dist/vfs/usr/lib/R/tests/Examples/datasets-Ex.Rout.save +3602 -0
  1514. package/dist/vfs/usr/lib/R/tests/Examples/grDevices-Ex.Rout.save +4379 -0
  1515. package/dist/vfs/usr/lib/R/tests/Examples/graphics-Ex.Rout.save +3237 -0
  1516. package/dist/vfs/usr/lib/R/tests/Examples/grid-Ex.Rout.save +2458 -0
  1517. package/dist/vfs/usr/lib/R/tests/Examples/splines-Ex.Rout.save +599 -0
  1518. package/dist/vfs/usr/lib/R/tests/Examples/stats-Ex.Rout.save +19391 -0
  1519. package/dist/vfs/usr/lib/R/tests/Examples/stats4-Ex.Rout.save +340 -0
  1520. package/dist/vfs/usr/lib/R/tests/Examples/tools-Ex.Rout.save +1125 -0
  1521. package/dist/vfs/usr/lib/R/tests/Makefile +76 -0
  1522. package/dist/vfs/usr/lib/R/tests/Makefile.common +529 -0
  1523. package/dist/vfs/usr/lib/R/tests/PCRE.R +123 -0
  1524. package/dist/vfs/usr/lib/R/tests/README +117 -0
  1525. package/dist/vfs/usr/lib/R/tests/WinUnicode.dat +0 -0
  1526. package/dist/vfs/usr/lib/R/tests/any-all.R +93 -0
  1527. package/dist/vfs/usr/lib/R/tests/any-all.Rout.save +111 -0
  1528. package/dist/vfs/usr/lib/R/tests/arima.rda +0 -0
  1529. package/dist/vfs/usr/lib/R/tests/arith-true.R +220 -0
  1530. package/dist/vfs/usr/lib/R/tests/arith-true.Rout.save +327 -0
  1531. package/dist/vfs/usr/lib/R/tests/arith.R +26 -0
  1532. package/dist/vfs/usr/lib/R/tests/arith.Rout.save +88 -0
  1533. package/dist/vfs/usr/lib/R/tests/array-subset.R +86 -0
  1534. package/dist/vfs/usr/lib/R/tests/complex.R +159 -0
  1535. package/dist/vfs/usr/lib/R/tests/complex.Rout.save +297 -0
  1536. package/dist/vfs/usr/lib/R/tests/conditions.R +155 -0
  1537. package/dist/vfs/usr/lib/R/tests/d-p-q-r-tests.R +504 -0
  1538. package/dist/vfs/usr/lib/R/tests/d-p-q-r-tests.Rout.save +884 -0
  1539. package/dist/vfs/usr/lib/R/tests/d-p-q-r-tst-2.R +829 -0
  1540. package/dist/vfs/usr/lib/R/tests/datasets.R +9 -0
  1541. package/dist/vfs/usr/lib/R/tests/datasets.Rout.save +669 -0
  1542. package/dist/vfs/usr/lib/R/tests/datetime.R +43 -0
  1543. package/dist/vfs/usr/lib/R/tests/datetime.Rout.save +81 -0
  1544. package/dist/vfs/usr/lib/R/tests/datetime2.R +150 -0
  1545. package/dist/vfs/usr/lib/R/tests/datetime2.Rout.save +529 -0
  1546. package/dist/vfs/usr/lib/R/tests/datetime3.R +535 -0
  1547. package/dist/vfs/usr/lib/R/tests/datetime4.R +94 -0
  1548. package/dist/vfs/usr/lib/R/tests/datetime4.Rout.save +386 -0
  1549. package/dist/vfs/usr/lib/R/tests/datetime5.R +30 -0
  1550. package/dist/vfs/usr/lib/R/tests/datetime5.Rout.save +92 -0
  1551. package/dist/vfs/usr/lib/R/tests/demos.R +30 -0
  1552. package/dist/vfs/usr/lib/R/tests/demos.Rout.save +1642 -0
  1553. package/dist/vfs/usr/lib/R/tests/demos2.R +9 -0
  1554. package/dist/vfs/usr/lib/R/tests/encodings.R +27 -0
  1555. package/dist/vfs/usr/lib/R/tests/eval-etc.R +234 -0
  1556. package/dist/vfs/usr/lib/R/tests/eval-etc.Rout.save +1014 -0
  1557. package/dist/vfs/usr/lib/R/tests/eval-fns.R +99 -0
  1558. package/dist/vfs/usr/lib/R/tests/iconv.R +35 -0
  1559. package/dist/vfs/usr/lib/R/tests/iec60559.R +18 -0
  1560. package/dist/vfs/usr/lib/R/tests/iec60559.Rout.save +60 -0
  1561. package/dist/vfs/usr/lib/R/tests/internet.R +20 -0
  1562. package/dist/vfs/usr/lib/R/tests/internet.Rout.save +164 -0
  1563. package/dist/vfs/usr/lib/R/tests/internet2.R +69 -0
  1564. package/dist/vfs/usr/lib/R/tests/isas-tests.Rin +60 -0
  1565. package/dist/vfs/usr/lib/R/tests/isas-tests.Rout.save +2598 -0
  1566. package/dist/vfs/usr/lib/R/tests/lapack.R +175 -0
  1567. package/dist/vfs/usr/lib/R/tests/lapack.Rout.save +435 -0
  1568. package/dist/vfs/usr/lib/R/tests/libcurl.R +88 -0
  1569. package/dist/vfs/usr/lib/R/tests/lm-tests.R +101 -0
  1570. package/dist/vfs/usr/lib/R/tests/lm-tests.Rout.save +414 -0
  1571. package/dist/vfs/usr/lib/R/tests/method-dispatch.R +157 -0
  1572. package/dist/vfs/usr/lib/R/tests/method-dispatch.Rout.save +222 -0
  1573. package/dist/vfs/usr/lib/R/tests/nanbug.rda +0 -0
  1574. package/dist/vfs/usr/lib/R/tests/no-segfault.Rin +143 -0
  1575. package/dist/vfs/usr/lib/R/tests/ok-errors.R +24 -0
  1576. package/dist/vfs/usr/lib/R/tests/ok-errors.Rout.save +44 -0
  1577. package/dist/vfs/usr/lib/R/tests/p-qbeta-strict-tst.R +595 -0
  1578. package/dist/vfs/usr/lib/R/tests/p-r-random-tests.R +181 -0
  1579. package/dist/vfs/usr/lib/R/tests/p-r-random-tests.Rout.save +326 -0
  1580. package/dist/vfs/usr/lib/R/tests/primitives.R +146 -0
  1581. package/dist/vfs/usr/lib/R/tests/print-tests.R +343 -0
  1582. package/dist/vfs/usr/lib/R/tests/print-tests.Rout.save +946 -0
  1583. package/dist/vfs/usr/lib/R/tests/r-strict-tst.R +57 -0
  1584. package/dist/vfs/usr/lib/R/tests/reg-BLAS.R +135 -0
  1585. package/dist/vfs/usr/lib/R/tests/reg-IO.R +60 -0
  1586. package/dist/vfs/usr/lib/R/tests/reg-IO.Rout.save +176 -0
  1587. package/dist/vfs/usr/lib/R/tests/reg-IO2.R +124 -0
  1588. package/dist/vfs/usr/lib/R/tests/reg-IO2.Rout.save +252 -0
  1589. package/dist/vfs/usr/lib/R/tests/reg-S4-examples.R +357 -0
  1590. package/dist/vfs/usr/lib/R/tests/reg-S4.R +1024 -0
  1591. package/dist/vfs/usr/lib/R/tests/reg-S4.Rout.save +1365 -0
  1592. package/dist/vfs/usr/lib/R/tests/reg-examples1.R +92 -0
  1593. package/dist/vfs/usr/lib/R/tests/reg-examples2.R +38 -0
  1594. package/dist/vfs/usr/lib/R/tests/reg-examples3.Rout.save +546 -0
  1595. package/dist/vfs/usr/lib/R/tests/reg-packages.R +559 -0
  1596. package/dist/vfs/usr/lib/R/tests/reg-plot-latin1.R +6 -0
  1597. package/dist/vfs/usr/lib/R/tests/reg-plot-latin1.pdf.save +649 -0
  1598. package/dist/vfs/usr/lib/R/tests/reg-plot.R +298 -0
  1599. package/dist/vfs/usr/lib/R/tests/reg-plot.pdf.save +11498 -0
  1600. package/dist/vfs/usr/lib/R/tests/reg-tests-1a.R +4898 -0
  1601. package/dist/vfs/usr/lib/R/tests/reg-tests-1b.R +2120 -0
  1602. package/dist/vfs/usr/lib/R/tests/reg-tests-1c.R +1631 -0
  1603. package/dist/vfs/usr/lib/R/tests/reg-tests-1d.R +5797 -0
  1604. package/dist/vfs/usr/lib/R/tests/reg-tests-1e.R +557 -0
  1605. package/dist/vfs/usr/lib/R/tests/reg-tests-2.R +3370 -0
  1606. package/dist/vfs/usr/lib/R/tests/reg-tests-2.Rout.save +8317 -0
  1607. package/dist/vfs/usr/lib/R/tests/reg-tests-3.Rout.save +1075 -0
  1608. package/dist/vfs/usr/lib/R/tests/reg-translation.R +125 -0
  1609. package/dist/vfs/usr/lib/R/tests/simple-true.R +190 -0
  1610. package/dist/vfs/usr/lib/R/tests/simple-true.Rout.save +300 -0
  1611. package/dist/vfs/usr/lib/R/tests/structure.R +48 -0
  1612. package/dist/vfs/usr/lib/R/tests/structure.Rout.save +88 -0
  1613. package/dist/vfs/usr/lib/R/tests/timezone.R +9 -0
  1614. package/dist/vfs/usr/lib/R/tests/utf8-regex.R +373 -0
  1615. package/dist/webR/chan/channel-common.d.ts +19 -0
  1616. package/dist/webR/chan/channel-service.d.ts +30 -0
  1617. package/dist/webR/chan/channel-shared.d.ts +24 -0
  1618. package/dist/webR/chan/channel.d.ts +43 -0
  1619. package/dist/webR/chan/message.d.ts +50 -0
  1620. package/dist/webR/chan/queue.d.ts +17 -0
  1621. package/dist/webR/chan/serviceworker.d.ts +6 -0
  1622. package/dist/webR/chan/task-common.d.ts +17 -0
  1623. package/dist/webR/chan/task-main.d.ts +15 -0
  1624. package/dist/webR/chan/task-worker.d.ts +42 -0
  1625. package/dist/webR/compat.d.ts +2 -0
  1626. package/dist/webR/config.d.ts +2 -0
  1627. package/dist/webR/console.d.ts +68 -0
  1628. package/dist/webR/emscripten.d.ts +126 -0
  1629. package/dist/webR/payload.d.ts +47 -0
  1630. package/dist/webR/proxy.d.ts +115 -0
  1631. package/dist/webR/robj-main.d.ts +112 -0
  1632. package/dist/webR/robj-worker.d.ts +225 -0
  1633. package/dist/webR/robj.d.ts +113 -0
  1634. package/dist/webR/utils-r.d.ts +25 -0
  1635. package/dist/webR/utils.d.ts +12 -0
  1636. package/dist/webR/webr-chan.d.ts +141 -0
  1637. package/dist/webR/webr-main.d.ts +282 -0
  1638. package/dist/webR/webr-worker.d.ts +1 -0
  1639. package/dist/webr-serviceworker.js +1654 -0
  1640. package/dist/webr-serviceworker.js.map +7 -0
  1641. package/dist/webr-serviceworker.mjs +1658 -0
  1642. package/dist/webr-serviceworker.mjs.map +7 -0
  1643. package/dist/webr-worker.js +4546 -0
  1644. package/dist/webr-worker.js.map +7 -0
  1645. package/dist/webr.cjs +4 -0
  1646. package/dist/webr.cjs.map +7 -0
  1647. package/dist/webr.mjs +4 -0
  1648. package/dist/webr.mjs.map +7 -0
  1649. package/package.json +1 -1
@@ -0,0 +1,3538 @@
1
+ R News
2
+
3
+ CHANGES IN R 4.3.0:
4
+
5
+ SIGNIFICANT USER-VISIBLE CHANGES:
6
+
7
+ * Calling && or || with LHS or (if evaluated) RHS of length greater
8
+ than one is now always an error, with a report of the form
9
+
10
+ 'length = 4' in coercion to 'logical(1)'
11
+
12
+ Environment variable _R_CHECK_LENGTH_1_LOGIC2_ no longer has any
13
+ effect.
14
+
15
+ NEW FEATURES:
16
+
17
+ * The included BLAS sources have been updated to those shipped with
18
+ LAPACK version 3.10.1. (This caused some platform-dependent
19
+ changes to package check output.) And then to the sources from
20
+ LAPACK version 3.11.0 (with changes only to double complex
21
+ subroutines).
22
+
23
+ * The included LAPACK sources have been updated to include the four
24
+ Fortran 90 routines rather than their Fortran 77 predecessors.
25
+ This may give some different signs in SVDs or
26
+ eigendecompositions.. (This completes the transition to LAPACK
27
+ 3.10.x begun in R 4.2.0.)
28
+
29
+ * The LAPACK sources have been updated to version 3.11.0. (No new
30
+ subroutines have been added, so this almost entirely bug fixes:
31
+ Those fixes do affect some computations with NaNs, including R's
32
+ NA.)
33
+
34
+ * The parser now signals _classed_ errors, notably in case of the
35
+ pipe operator |>. The error object and message now give line and
36
+ column numbers, mostly as proposed and provided by Duncan Murdoch
37
+ in PR#18328.
38
+
39
+ * toeplitz() is now generalized for asymmetric cases, with a
40
+ toeplitz2() variant.
41
+
42
+ * xy.coords() and xyz.coords() and consequently, e.g., plot(x,y,
43
+ log = "y") now signal a _classed_ warning about negative values
44
+ of y (where log(.) is NA). Such a warning can be specifically
45
+ suppressed or caught otherwise.
46
+
47
+ * Regular expression functions now check more thoroughly whether
48
+ their inputs are valid strings (in their encoding, e.g. in
49
+ UTF-8).
50
+
51
+ * The performance of grep(), sub(), gsub() and strsplit() has been
52
+ improved, particularly with perl = TRUE and fixed = TRUE. Use of
53
+ useBytes = TRUE for performance reasons should no longer be
54
+ needed and is discouraged: it may lead to incorrect results.
55
+
56
+ * apropos() gains an argument dot_internals which is used by the
57
+ completion (help(rcompgen)) engine to also see base internals
58
+ such as .POSIXct().
59
+
60
+ * Support in tools::Rdiff() for comparing uncompressed PDF files is
61
+ further reduced - see its help page.
62
+
63
+ * qqplot(x, y, ...) gains conf.level and conf.args arguments for
64
+ computing and plotting a confidence band for the treatment
65
+ function transforming the distribution of x into the distribution
66
+ of y (Switzer, 1976, _Biometrika_). Contributed by Torsten
67
+ Hothorn.
68
+
69
+ * Performance of package_dependencies() has been improved for cases
70
+ when the number of dependencies is large.
71
+
72
+ * Strings newly created by gsub(), sub() and strsplit(), when any
73
+ of the inputs is marked as "bytes", are also marked as "bytes".
74
+ This reduces the risk of creating invalid strings and accidental
75
+ substitution of bytes deemed invalid.
76
+
77
+ * Support for readLines(encoding = "bytes") has been added to allow
78
+ processing special text files byte-by-byte, without creating
79
+ invalid strings.
80
+
81
+ * iconv(from = "") now takes into account any declared encoding of
82
+ the input elements and uses it in preference to the native
83
+ encoding. This reduces the risk of accidental creation of
84
+ invalid strings, particularly when different elements of the
85
+ input have different encoding (including "bytes").
86
+
87
+ * Package repositories in getOption("repos") are now initialized
88
+ from the repositories file when utils is loaded (if not already
89
+ set, e.g., in .Rprofile). (From a report and patch proposal by
90
+ Gabriel Becker in PR#18405.)
91
+
92
+ * compactPDF() gets a verbose option.
93
+
94
+ * type.convert() and hence read.table() get new option tryLogical =
95
+ TRUE with back compatible default. When set to false, converts
96
+ "F" or "T" columns to character.
97
+
98
+ * Added new unit prefixes "R" and "Q" for abbreviating
99
+ (unrealistically large) sizes beyond 10^{27} in standard = "SI",
100
+ thanks to Henrik Bengtsson's PR#18435.
101
+
102
+ * as.data.frame()'s default method now also works fine with atomic
103
+ objects inheriting from classes such as "roman", "octmode" and
104
+ "hexmode", such fulfilling the wish of PR#18421, by Benjamin
105
+ Feakins.
106
+
107
+ * The as.data.frame.vector() utility now errors for wrong-length
108
+ row.names. It warned for almost six years, with "Will be an
109
+ error!".
110
+
111
+ * sessionInfo() now also contains La_version() and reports codepage
112
+ and timezone when relevant, in both print() and toLatex() methods
113
+ which also get new option tzone for displaying timezone
114
+ information when locale = FALSE.
115
+
116
+ * New function R_compiled_by() reports the C and Fortran compilers
117
+ used to build R, if known.
118
+
119
+ * predict(<lm>, newdata = *) no longer unnecessarily creates an
120
+ offset of all 0s.
121
+
122
+ * solve() for complex inputs now uses argument tol and by default
123
+ checks for 'computational singularity' (as it long has done for
124
+ numeric inputs).
125
+
126
+ * predict(<rank-deficient lm>, newdata=*) now obeys a new argument
127
+ rankdeficient, with new default "warnif", warning only if there
128
+ are non-estimable cases in newdata. Other options include
129
+ rankdeficient = "NA", predicting NA for non-estimable newdata
130
+ cases. This addresses PR#15072 by Russ Lenth and is based on his
131
+ original proposal and discussions in PR#16158 also by David Firth
132
+ and Elin Waring. Still somewhat experimental.
133
+
134
+ * Rgui console implementation now works better with the NVDA screen
135
+ reader when the full blinking cursor is selected. The underlying
136
+ improvements in cursor handling may help also other screen
137
+ readers on Windows.
138
+
139
+ * The drop-field control in GraphApp can now be left with the TAB
140
+ key and all controls can be navigated in the reverse order using
141
+ the Shift+TAB key, improving accessibility of the Rgui
142
+ configuration editor.
143
+
144
+ * qnorm(<very large negative>, log.p=TRUE) is now fully accurate
145
+ (instead of to "only" minimally five digits).
146
+
147
+ * demo(error.catching) now also shows off withWarnings() and
148
+ tryCatchWEMs().
149
+
150
+ * As an experimental feature the placeholder _ can now also be used
151
+ in the rhs of a forward pipe |> expression as the first argument
152
+ in an extraction call, such as _$coef. More generally, it can be
153
+ used as the head of a chain of extractions, such as _$coef[[2]].
154
+
155
+ * Spaces in the environment variable used to choose the R session's
156
+ temporary directory (TMPDIR, TMP and TEMP are tried in turn) are
157
+ now fatal. (On Windows the 'short path' version of the path is
158
+ tried and used if that does not contain a space.)
159
+
160
+ * all.equal.numeric() gets a new optional switch giveErr to return
161
+ the numeric error as attribute. Relatedly,
162
+ stopifnot(all.equal<some>(a, b, ..)) is as "smart" now, as
163
+ stopifnot(all.equal(....)) has been already, thus allowing
164
+ customized all.equal<Some>() wrappers.
165
+
166
+ * R on Windows is now able to work with path names longer than 260
167
+ characters when these are enabled in the system (requires at
168
+ least Windows 10 version 1607). Packages should be updated to
169
+ work with long paths as well, instead of assuming PATH_MAX to be
170
+ the maximum length. Custom front-ends and applications embedding
171
+ R need to update their manifests if they wish to allow this
172
+ feature. See
173
+ <https://blog.r-project.org/2023/03/07/path-length-limit-on-windows>
174
+ for more information.
175
+
176
+ * 'Object not found' and 'Missing argument' errors now give a more
177
+ accurate error context. Patch provided by Lionel Henry in
178
+ PR#18241.
179
+
180
+ * The @ operator is now an S3 generic. Based on contributions by
181
+ Tomasz Kalinowski in PR#18482.
182
+
183
+ * New generic chooseOpsMethod() provides a mechanism for objects to
184
+ resolve cases where two suitable methods are found for an Ops
185
+ Group Generic. This supports experimenting with alternative
186
+ object systems. Based on contributions by Tomasz Kalinowski in
187
+ PR#18484.
188
+
189
+ * inherits(x, what) now accepts values other than a simple
190
+ character vector for argument what. A new generic, nameOfClass(),
191
+ is called to resolve the class name from what. This supports
192
+ experimenting with alternative object systems. Based on
193
+ contributions by Tomasz Kalinowski in PR#18485.
194
+
195
+ * Detection of BLAS/LAPACK in use (sessionInfo()) with FlexiBLAS
196
+ now reports the current backend.
197
+
198
+ * The "data.frame" method for subset() now warns about extraneous
199
+ arguments, typically catching the use of = instead of == in the
200
+ subset expression.
201
+
202
+ * Calling a:b when numeric a or b is longer than one may now be
203
+ made into an error by setting environment variable
204
+ _R_CHECK_LENGTH_COLON_ to a true value, along the proposal in
205
+ PR#18419 by Henrik Bengtsson.
206
+
207
+ * density(x, weights = *) now warns if automatic bandwidth
208
+ selection happens without using weights; new optional warnWbw may
209
+ suppress the warning. Prompted by Christoph Dalitz' PR#18490 and
210
+ its discussants.
211
+
212
+ * rm(list = *) is faster and more readable thanks to Kevin Ushey's
213
+ PR#18492.
214
+
215
+ * The plot.lm() function no longer produces a normal Q-Q plot for
216
+ GLMs. Instead it plots a half-normal Q-Q plot of the absolute
217
+ value of the standardized deviance residuals.
218
+
219
+ * The print() method for class "summary.glm" no longer shows
220
+ summary statistics for the deviance residuals by default. Its
221
+ optional argument show.residuals can be used to show them if
222
+ required.
223
+
224
+ * The tapply() function now accepts a data frame as its X argument,
225
+ and allows INDEX to be a formula in that case. by.data.frame()
226
+ similarly allows INDICES to be a formula.
227
+
228
+ * The performance of df[j] <- value (including for missing j) and
229
+ write.table(df) has been improved for data frames df with a large
230
+ number of columns. (Thanks to Gabriel Becker's PR#18500,
231
+ PR#18503 and discussants, prompted by a report from Toby Dylan
232
+ Hocking on the R-devel mailing list.)
233
+
234
+ * The matrix multiply operator %*% is now an S3 generic, belonging
235
+ to new group generic matrixOps. From Tomasz Kalinowski's
236
+ contribution in PR#18483.
237
+
238
+ * New function array2DF() to convert arrays to data frames,
239
+ particularly useful for the list arrays created by tapply().
240
+
241
+ DATES and TIMES:
242
+
243
+ * On platforms where (non-UTC) datetimes before 1902 (or before
244
+ 1900 as with system functions on recent macOS) are guessed by
245
+ extrapolating time zones from 1902-2037, there is a warning at
246
+ the first use of extrapolation in a session. (As all time zones
247
+ post 2037 are extrapolation, we do not warn on those.)
248
+
249
+ * (Platforms using --with-internal-tzone, including Windows and by
250
+ default macOS). How years are printed in dates or date-times can
251
+ be controlled by environment variable R_PAD_YEARS_BY_ZERO. The
252
+ default remains to pad to 4 digits by zeroes, but setting value
253
+ no gives no padding (as used by default by glibc).
254
+
255
+ * strftime() tries harder to determine the offset for the "%z"
256
+ format, and succeeds on the mainstream R platforms.
257
+
258
+ * strftime() has a limit of 2048 bytes on the string produced -
259
+ attempting to exceed this is an error. (Previously it silently
260
+ truncated at 255 bytes.)
261
+
262
+ * sessionInfo() records (and by default prints) the system time
263
+ zone as part of the locale information. Also, the source
264
+ (system/internal) of the date-time conversion and printing
265
+ functions.
266
+
267
+ * Objects of class "POSIXlt" created in this version of R always
268
+ have 11 components: component zone is always set, and component
269
+ gmtoff is set for times in UTC and usually set on the (almost
270
+ all) platforms which have C-level support, otherwise is NA.
271
+
272
+ * There are comprehensive validity checks on the structure of
273
+ objects of class "POSIXlt" when converting (including formatting
274
+ and printing). (This avoids mis-conversions of hand-crafted
275
+ objects.)
276
+
277
+ * There is some support for using the native date-time routines on
278
+ macOS: this is only viable on recent versions (e.g. 12.6 and 13)
279
+ and does get wrong some historical changes (before 1900, during
280
+ WWII). Use of --with-internal-tzone remains the default.
281
+
282
+ * as.POSIXct(<numeric>) and as.POSIXlt(.) (without specifying
283
+ origin) now work. So does as.Date(<numeric>).
284
+
285
+ * as.Date.POSIXct(., tz) now treats several tz values, notably
286
+ "GMT" as equivalent to "UTC", proposed and improved by Michael
287
+ Chirico and Joshua Ulrich in PR#17674.
288
+
289
+ * Experimental balancePOSIXlt() utility allows using "ragged" and
290
+ or out-of-range "POSIXlt" objects more correctly, e.g., in
291
+ subsetting and subassignments. Such objects are now documented.
292
+
293
+ More experimentally, a "POSIXlt" object may have an attribute
294
+ "balanced" indicating if it is known to be filled or fully
295
+ balanced.
296
+
297
+ * Functions axis.Date() and axis.POSIXct() are rewritten to gain
298
+ better default tick locations and better default formats by using
299
+ prettyDate(). Thanks to Swetlana Herbrandt.
300
+
301
+ * The mapping of Windows' names for time zones to IANA's 'Olson'
302
+ names has been updated. When ICU is available (it is by
303
+ default), it is used to get a mapping for the current region set
304
+ in Windows. This can be overridden by setting environment
305
+ variable TZ to the desired Olson name - see OlsonNames() for
306
+ those currently available.
307
+
308
+ GRAPHICS:
309
+
310
+ * The graphics engine version, R_GE_version, has been bumped to 16
311
+ and so packages that provide graphics devices should be
312
+ reinstalled.
313
+
314
+ * The grDevices and grid packages have new functions for rendering
315
+ typeset glyphs, primarily: grDevices::glyphInfo() and
316
+ grid::grid.glyph().
317
+
318
+ Rendering of typeset glyphs is only supported so far on the
319
+ Cairo-based graphics devices and on the pdf() and quartz()
320
+ devices.
321
+
322
+ * The defined behaviour for "clear" and "source" compositing
323
+ operators (via grid::grid.group()) has been changed (to align
324
+ better with simple interpretation of original Porter-Duff
325
+ definitions).
326
+
327
+ * Support for gradients, patterns, clipping paths, masks, groups,
328
+ compositing operators, and affine transformations has been added
329
+ to the quartz() device.
330
+
331
+ INSTALLATION on a UNIX-ALIKE:
332
+
333
+ * A system installation of generic LAPACK 3.10.0 or later will be
334
+ preferred to the version in the R sources.
335
+
336
+ configure option --with-lapack=no (equivalently --without-lapack)
337
+ forces compilation of the internal LAPACK sources.
338
+
339
+ If --with-lapack is not specified, a system liblapack is looked
340
+ for and used if it reports version 3.10.0 or later and does not
341
+ contain BLAS routines.
342
+
343
+ Packages using LAPACK will need to be reinstalled if this changes
344
+ to using an external library.
345
+
346
+ * On aarch64 Linux platforms using GCC, configure now defaults to
347
+ -fPIC (instead of -fpic), as desired in PR#18326.
348
+
349
+ * configure now checks conversion of datetimes between POSIXlt and
350
+ POSIXct around year 2020. Failure (which has been seen on
351
+ platforms missing tzdata) is fatal.
352
+
353
+ * If configure option --with-valgrind-instrumentation is given
354
+ value 1 or 2, option --with-system-valgrind-headers is now the
355
+ default and ignored (with a warning). It is highly recommended
356
+ that the system headers are installed alongside valgrind: they
357
+ are part of its packaging on some Linux distributions and
358
+ packaged separately (e.g. in the valgrind-devel RPM) on others.
359
+ configure will give a warning if they are not found.
360
+
361
+ The system headers will be required in a future release of R to
362
+ build with valgrind instrumentation.
363
+
364
+ * libcurl 8.x is now accepted by configure: despite a change in
365
+ major version number it changes neither API nor ABI.
366
+
367
+ INSTALLATION on WINDOWS:
368
+
369
+ * The makefiles and installer scripts for Windows have been
370
+ tailored to Rtools43, an update of the Rtools42 toolchain. It is
371
+ based on gcc 12 and newer versions of MinGW-W64, binutils and
372
+ libraries. At this time R-devel can still be built using
373
+ Rtools42 without changes, but when R-devel is installed via the
374
+ installer, it will by default look for Rtools43.
375
+
376
+ * Old make targets rsync-extsoft and 32-bit ones that are no longer
377
+ needed have been removed.
378
+
379
+ * Default builds (including for packages) no longer select C99.
380
+ Thus the C standard used is the default for the compiler, which
381
+ for the toolchain in Rtools43 is C17. (This is consistent with
382
+ Unix builds.)
383
+
384
+ PACKAGE INSTALLATION:
385
+
386
+ * The default C++ standard has been changed to C++17 where
387
+ available (which it is on all currently checked platforms): if
388
+ not C++14 or C++11 is used if available otherwise C++ is not
389
+ supported.
390
+
391
+ * USE_FC_LEN_T is the default: this uses the correct
392
+ (compiler-dependent) prototypes for Fortran BLAS/LAPACK routines
393
+ called from C/C++, and requires adjustment of many such calls -
394
+ see 'Writing R Extensions' ?6.6.1.
395
+
396
+ * There is initial support for C++23 as several compilers are now
397
+ supporting -std=c++23 or -std=c++2b or similar. As for C++20,
398
+ there no additional configure checks for C++23 features beyond a
399
+ check that the compiler reports a __cplusplus value greater than
400
+ that in the C++20 standard. C++ feature tests should be used.
401
+
402
+ * There is support for a package to indicate the version of the C
403
+ standard which should be used to compile it, and for the
404
+ installing user to specify this. In most cases R defaults to the
405
+ C compiler's default standard which is C17 (a `bug-fix' of C11) -
406
+ earlier versions of R or compilers may have defaulted to C99.
407
+
408
+ Current options are:
409
+
410
+ USE_C17 Use a standard that is at most C17. The intention is to
411
+ allow legacy packages to still be installed when later C
412
+ standards become the default, including packages using new
413
+ keywords as identifiers or with K&R-style function
414
+ declarations. This will use C17 if available, falling back
415
+ to C11.
416
+
417
+ USE_C90 Use the C90 (aka C89) standard. (As that standard did
418
+ not require compilers to identify that version, all we can
419
+ verify is that the compiler does not claim to be using a
420
+ later standard. It may accept C99 features - for example
421
+ clang accepts // to make comments.)
422
+
423
+ USE_C99 Use the C99 standard. This should be rarely needed - it
424
+ avoids the few new features of C11/C17 which can be useful if
425
+ a package assumes them if C17 is specified and they are not
426
+ implemented.
427
+
428
+ USE_C23 Use C23 (or in future, later). Compiler/library support
429
+ for C23 is still being implemented, but LLVM clang from
430
+ 15.0.0 and the upcoming GCC 13 have quite extensive support.
431
+
432
+ These can be specified as part of the SystemRequirements field in
433
+ the package's DESCRIPTION file or _via_ options --use-C17 and so
434
+ on of R CMD INSTALL and R CMD SHLIB.
435
+
436
+ For further details see "Writing R Extensions" ?1.2.5.
437
+
438
+ * (Windows) A src/Makefile.ucrt or src/Makefile.win file is now
439
+ included after R_HOME/etcR_ARCH/Makeconf and so no longer needs
440
+ to include that file itself. Installation of a package with such
441
+ a file now uses a site Makevars file in the same way as a package
442
+ with a src/Makevars.win file would.
443
+
444
+ * configure is now passed crucial variables such as CC and CFLAGS
445
+ in its environment, as many packages were not setting them (as
446
+ documented in 'Writing R Extensions' ?1.2).
447
+
448
+ This has most effect where configure is used to compile parts of
449
+ the package - most often by cmake or libtool which obfuscate the
450
+ actual compile commands used.
451
+
452
+ Also used for configure.win and configure.ucrt on Windows.
453
+
454
+ FORTRAN FLAGS:
455
+
456
+ * The flag -fno-optimize-sibling-calls is no longer forced for
457
+ gfortran 7 and later. It should no longer be needed now using
458
+ 'hidden' character-length arguments when calling BLAS/LAPACK
459
+ routines from C/C++ is the default even for packages. (Unless
460
+ perhaps packages call Fortran code from C/C++ without using R's
461
+ headers and without allowing for these arguments.)
462
+
463
+ C-LEVEL FACILITIES:
464
+
465
+ * The deprecated S-compatibility macros DOUBLE_* in
466
+ R_ext/Constants.h (included by R.h) have been removed.
467
+
468
+ * The deprecated legacy typedefs of Sint and Sfloat in header R.h
469
+ are no longer defined, and that header no longer includes header
470
+ limits.h from C nor climits from C++.
471
+
472
+ * New macro CAD5R() is provided in Rinternals.h and used in a few
473
+ places in the R sources.
474
+
475
+ * ALTREP now supports VECSXP vectors. Contributed by Gabor Csardi
476
+ in PR#17620.
477
+
478
+ * The Rcomplex definition (in header R_ext/Complex.h) has been
479
+ extended to prevent possible mis-compilation when interfacing
480
+ with Fortran (PR#18430). The new definition causes compiler
481
+ warnings with static initializers such as {1, 2}, which can be
482
+ changed to {.r=1, .i=2}.
483
+
484
+ Using the new definition from C++ depends on compiler extensions
485
+ supporting C features that have not been incorporated into the
486
+ C++ standards but are available in g++ and clang++: this may
487
+ result in C++ compiler warnings but these have been worked around
488
+ for recent versions of common compilers (GCC, Apple/LLVM clang,
489
+ Intel).
490
+
491
+ It is intended to change the inclusion of header R_ext/Complex.h
492
+ by other R headers, so C/C++ code files which make use of
493
+ Rcomplex should include that header explicitly.
494
+
495
+ UTILITIES:
496
+
497
+ * R CMD check does more checking of package .Rd files, warning
498
+ about invalid email addresses and (some) invalid URIs and noting
499
+ empty \item labels in description lists.
500
+
501
+ * R CMD check now also reports problems when reading package news
502
+ in md (file NEWS.md) and (optionally) plain text (file NEWS)
503
+ formats.
504
+
505
+ * _R_CHECK_TIMINGS_ defaults to a value from the environment even
506
+ for R CMD check --as-cran; this allows for exceptionally fast or
507
+ slow platforms.
508
+
509
+ It now applies to checking PDF and HTML versions of the manuals,
510
+ and 'checking CRAN incoming feasibility'.
511
+
512
+ * R CMD check can optionally (but included in --as-cran) check
513
+ whether HTML math rendering _via_ KaTeX works for the package .Rd
514
+ files.
515
+
516
+ * Non-interactive debugger invocations can be trapped by setting
517
+ the environment variable _R_CHECK_BROWSER_NONINTERACTIVE_ to a
518
+ true value. This is enabled by R CMD check --as-cran to detect
519
+ the use of leftover browser() statements in the package.
520
+
521
+ * The use of sprintf and vsprintf from C/C++ has been deprecated in
522
+ macOS 13 and is a known security risk. R CMD check now reports
523
+ (on all platforms) if their use is found in compiled code:
524
+ replace by snprintf or vsnprintf respectively. [*NB:* whether
525
+ such calls get compiled into the package is platform-dependent.]
526
+
527
+ * Where recorded at installation, R CMD check reports the C and
528
+ Fortran compilers used to build R.
529
+
530
+ It reports the OS in use (if known, as given by osVersion) as
531
+ well as that R was built for.
532
+
533
+ It notes if a C++ standard was specified which is older than the
534
+ current default: many packages have used C++11 to mean 'not
535
+ C++98' - as C++11 is the minimum supported since R 4.0.0, that
536
+ specification can probably be removed.
537
+
538
+ * R CMD INSTALL reports the compilers (and on macOS, the SDK) used,
539
+ and this is copied to the output of R CMD check.
540
+
541
+ Where a C++ standard is specified, it is reported.
542
+
543
+ * R CMD check's 'checking compilation flags in Makevars' has been
544
+ relaxed to accept the use of flags such as -std=f2008 in
545
+ PKG_FFLAGS.
546
+
547
+ * tools::buildVignettes() has a new argument skip, which is used by
548
+ R CMD check to skip (and note) vignettes with unavailable
549
+ \VignetteDepends (PR#18318).
550
+
551
+ * New generic .AtNames() added to enable class-specific completions
552
+ after @. The formerly internal function findMatches() is now
553
+ exported, mainly for use in methods for .DollarNames() and
554
+ .AtNames().
555
+
556
+ DEPRECATED AND DEFUNCT:
557
+
558
+ * default.stringsAsFactors() is defunct.
559
+
560
+ * Calling as.data.frame.<class>() directly (for 12 atomic classes)
561
+ is going to be formally deprecated, currently activated by
562
+ setting the environment variable
563
+ _R_CHECK_AS_DATA_FRAME_EXPLICIT_METHOD_ to non-empty, which also
564
+ happens in R CMD check --as-cran.
565
+
566
+ BUG FIXES:
567
+
568
+ * Hashed environments with sizes less than 5 can now grow.
569
+ (Reported to R-devel by Duncan Garmonsway.)
570
+
571
+ * as.character(<Rd>, deparse = TRUE) failed to re-escape curly
572
+ braces in LaTeX-like text. (Reported by Hadley Wickham in
573
+ PR#18324.)
574
+
575
+ * library() now passes its lib.loc argument when requiring Depends
576
+ packages; reported (with fix) in PR#18331 by Mikael Jagan.
577
+
578
+ * R CMD Stangle: improved message about 'Output' files.
579
+
580
+ * head(x, n) and tail(x, n) now signal an error if n is not
581
+ numeric, instead of incidentally "working" sometimes returning
582
+ all of x. Reported and discussed by Colin Fay, in PR#18357.
583
+
584
+ * The "lm" method for summary() now gives the correct F-statistic
585
+ when the model contains an offset. Reported in PR#18008.
586
+
587
+ * C() and `contrasts<-`() now preserve factor level names when
588
+ given a function object (as opposed a function name which did
589
+ preserve names). Reported in PR#17616.
590
+
591
+ * c(a = 1, 2)[[]] no longer matches 2 but rather signals a
592
+ _classed_ error. Reported and analysed by Davis Vaughan in
593
+ PR#18367, a duplicate of PR#18004, by Jan Meis et al. For
594
+ consistency, NULL[[]] is also erroneous now. x[[]] <- v gives an
595
+ error of the same class "MissingSubscriptError".
596
+
597
+ * The relist() function of utils now supports NULL elements in the
598
+ skeleton (PR#15854).
599
+
600
+ * ordered(levels = *) (missing x) now works analogously to factor(,
601
+ ordered=TRUE); reported (with fix) by Achim Zeileis in PR#18389.
602
+
603
+ * User-defined Rd macro definitions can now span multiple lines,
604
+ thanks to a patch from Duncan Murdoch. Previously, the Rd parser
605
+ silently ignored everything after the first line.
606
+
607
+ * Plain-text help (tools::Rd2txt()) now preserves an initial blank
608
+ line for text following description list items.
609
+
610
+ * tools::Rd2HTML() and tools::Rd2latex() no longer split \arguments
611
+ and \value lists at Rd comments.
612
+
613
+ * tools::Rd2latex() now correctly handles optional text outside
614
+ \items of argument lists as well as bracketed text at the
615
+ beginning of sections, e.g., \value{[NULL]}.
616
+
617
+ * as.character(<POSIXt>) now behaves more in line with the methods
618
+ for atomic vectors such as numbers, and is no longer influenced
619
+ by options(). Ditto for as.character(<Date>). The
620
+ as.character() method gets arguments digits and OutDec with
621
+ defaults _not_ depending on options(). Use of as.character(*,
622
+ format = .) now warns.
623
+
624
+ * Similarly, the as.character.hexmode() and *.octmode() methods
625
+ also behave as good citizen methods and back compatibility option
626
+ keepStr = TRUE.
627
+
628
+ * The as.POSIXlt(<POSIXlt>) and as.POSIXct(<POSIXct>) default
629
+ methods now do obey their tz argument, also in this case.
630
+
631
+ * as.POSIXlt(<Date>) now does apply a tz (time zone) argument, as
632
+ does as.POSIXct(); partly suggested by Roland Fuss on the R-devel
633
+ mailing list.
634
+
635
+ * as.Date.POSIXlt(x) now also works when the list components are of
636
+ unequal length, aka "partially filled" or "ragged".
637
+
638
+ * expand.model.frame() looked up variables in the wrong environment
639
+ when applied to models fitted without data. Reported in
640
+ PR#18414.
641
+
642
+ * time() now (also) uses the ts.eps = getOption("ts.eps") argument
643
+ and thus by default rounds values very close to the start (or
644
+ end) of a year. Based on a proposal by Andre? V. Kostyrka on
645
+ R-help.
646
+
647
+ * Printing of a factanal() result with just one factor and sort =
648
+ TRUE now works regularly, fixing PR#17863 by Timothy Bates,
649
+ thanks to the 'R Contributors' working group.
650
+
651
+ * Printing 0-length objects of class "factor", "roman", "hexmode",
652
+ "octmode", "person", "bibentry", or "citation" now prints
653
+ something better, one of which fixes PR#18422, reported by
654
+ Benjamin Feakins.
655
+
656
+ * Sys.timezone() queries timedatectl only if systemd is loaded;
657
+ addressing a report by Jan Gorecki in PR#17421.
658
+
659
+ * The formula method of cor.test() had scoping problems when
660
+ environment(formula) was not the calling environment; reported
661
+ with a patch proposal by Mao Kobayashi in PR#18439.
662
+
663
+ * attach() of an environment with active bindings now preserves the
664
+ active bindings. Reported by Kevin Ushey in PR#18425.
665
+
666
+ * BLAS detection now works also with system-provided libraries not
667
+ available as regular files. This fixes detection of the
668
+ Accelerate framework on macOS since Big Sur. Reported by David
669
+ Novgorodsky.
670
+
671
+ * download.file() gives a helpful error message in case of an
672
+ invalid download.file.method option, thanks to Colin Fay's report
673
+ in PR#18455.
674
+
675
+ * Sporadic crashes of Rterm when using completion have been fixed.
676
+
677
+ * Rprof() is now more reliable. A livelock in thread
678
+ initialization with too short sampling interval has been fixed on
679
+ macOS. A deadlock in using the C runtime has been fixed on
680
+ Windows. A potential deadlock has been prevented on Unix.
681
+
682
+ * Cursor placement in Rgui now works even after a fixed-width font
683
+ is selected.
684
+
685
+ * Mandatory options (options()) are now set on startup so that
686
+ saving and restoring them always works (PR#18372).
687
+
688
+ * Package installation, R CMD INSTALL or install.packages(*), now
689
+ parses each of the <pkg>/R/*.R files individually instead of
690
+ first concatenating and then parse()ing the large resulting file.
691
+ This allows parser or syntax errors to be diagnosed with correct
692
+ file names and line numbers, thanks to Simon Dedman's report and
693
+ Bill Dunlap's patch in PR#17859.
694
+
695
+ This _does_ require syntactically self contained R source files
696
+ now, fixing another inadvertent bug.
697
+
698
+ * predict.lm(<model with offset>) now finds the offset in the
699
+ correct environment, thanks to Andr? Gillibert's report and patch
700
+ in PR#18456.
701
+
702
+ * getInitial(<formula>) now finds the selfStart model in the
703
+ correct environment. (Reported by Ivan Krylov in PR#18368.)
704
+
705
+ * Fix for possible segfault when using recently-added graphics
706
+ features, such as gradients, clipping paths, masks, and groups
707
+ with pdf(file=NULL).
708
+
709
+ * class(m) <- class(m) no longer changes a matrix m by adding a
710
+ class _attribute_.
711
+
712
+ * packageDate(pkg) now only warns once if there is no pkg.
713
+
714
+ * When ts() creates a multivariate time series, "mts", it also
715
+ inherits from "array" now, and is.mts() is documented _and_
716
+ stricter.
717
+
718
+ * Rd2txt() now preserves line breaks of \verb Rd content and from
719
+ duplicated \cr. The former also fixes the rendering of verbatim
720
+ output from Rd \Sexpr in plain-text help.
721
+
722
+ * uniroot(f, interval) should no longer wrongly converge _outside_
723
+ the interval in some cases where abs(f(x)) == Inf for an x at the
724
+ interval boundary, thanks to posts by Ben Bolker and Serguei
725
+ Sokol on R-devel.
726
+
727
+ * Vectorized alpha handling in palette functions such as in gray(),
728
+ rainbow(), or hcl.colors() works correctly now, thanks to Achim
729
+ Zeileis' report and patch in PR#18476.
730
+
731
+ * Formatting and print()ing of bibentry objects has dropped the
732
+ deprecated citation.bibtex.max argument, such that the bibtex
733
+ argument's default for print.bibentry() depends directly on the
734
+ citation.bibtex.max option, whereas in format.bibentry() the
735
+ option no longer applies.
736
+
737
+ * Attempting to use a character string naming a foreign function
738
+ entry point in a foreign function call in a package will now
739
+ signal an error if the packages has called R_forceSymbols to
740
+ specify that symbols must be used.
741
+
742
+ * An error in table() could permanently set options(warn=2)
743
+ promoting all subsequent warnings to errors.
744
+
745
+ * The sigma() function gave misleading results for binary GLMs. A
746
+ new method for objects of class "glm" returns the square root of
747
+ the estimate of the dispersion parameter using the same
748
+ calculation as summary.glm().
749
+
750
+ * bs() and ns() in the (typical) case of automatic knot
751
+ construction, when some of the supposedly inner knots coincide
752
+ with boundary knots, now moves them inside (with a warning),
753
+ building on PR#18442 by Ben Bolker.
754
+
755
+ * R CMD on Windows now skips the site profile with --no-site-file
756
+ and --vanilla even when R_PROFILE is set (PR#18512, from Kevin
757
+ Ushey).
758
+
759
+ CHANGES IN R 4.2.3:
760
+
761
+ C-LEVEL FACILITIES:
762
+
763
+ * The definition of DL_FUNC in R_ext/Rdynload.h has been changed to
764
+ be fully C-compliant. This means that functions loaded _via_ for
765
+ example R_GetCCallable need to be cast to an appropriate type if
766
+ they have any arguments.
767
+
768
+ * .Machine has a new element sizeof.time_t to identify old systems
769
+ with a 32-bit type and hence a limited range of date-times (and
770
+ limited support for dates millions of years from present).
771
+
772
+ PACKAGE INSTALLATION:
773
+
774
+ * (Windows) The default C++ standard had accidentally been left at
775
+ C++11 when it was changed to C++14 on Unix.
776
+
777
+ BUG FIXES:
778
+
779
+ * As "POSIXlt" objects may be "partially filled" and their list
780
+ components meant to be recycled, length() now is the length of
781
+ the longest component.
782
+
783
+ * as.POSIXlt.Date() could underflow for dates in the far past (more
784
+ than half a million years BCE).
785
+
786
+ * as.Date.POSIXlt(x) would return "1970-01-01" instead of NA in R
787
+ 4.2.2, e.g., for
788
+
789
+ x <- as.POSIXlt(c("2019-01-30","2001-1-1"))
790
+ x$mon <- c(0L, NA); as.Date(x)
791
+
792
+ * R CMD check failed to apply enabled _R_CHECK_SUGGESTS_ONLY_ to
793
+ examples and vignettes (regression in R 4.2.0).
794
+
795
+ * R CMD check did not re-build vignettes in separate processes by
796
+ default (regression in R 4.2.0).
797
+
798
+ * Running examples from HTML documentation now restores previous
799
+ knitr settings and options (PR#18420).
800
+
801
+ * Quartz: fonts are now located using Core Graphics API instead of
802
+ deprecated ATS which is no longer supported in the macOS 13 SDK
803
+ (PR#18426). This also addresses an issue where the currently
804
+ used font in the Quartz device context was not correctly
805
+ retained.
806
+
807
+ * (Windows) Math symbols in text drawing functions are again
808
+ rendered correctly (PR#18440). This fixes a regression in R
809
+ 4.2.1 caused by a fix in PR#18382 which uncovered an issue in
810
+ GraphApp due to which the symbol charset was not used with TT
811
+ Symbol font face.
812
+
813
+ * (Windows) Installing a package with a src/Makefile.{win,ucrt}
814
+ file includes ~/.R/Makevars.win64 in the search for user
815
+ makevars, as documented in "R Installation and Administration"
816
+ and done for packages with a src/Makevars.{win,ucrt} file.
817
+
818
+ * format(<POSIXlt_w/_unbalanced_sec>, "....%OS<n>") with n > 0 no
819
+ longer accidentally uses the unbalanced seconds, thanks to
820
+ Suharto Anggono's report (including patch) in PR#18448.
821
+
822
+ * solve.default(a, b) works around issues with some versions of
823
+ LAPACK when a contains NA or NaN values.
824
+
825
+ * When UseMethod() cannot dispatch, it no longer segfaults
826
+ producing the error message in case of a long class(), thanks to
827
+ Joris Vankerschaver's report (including patch) in PR#18447.
828
+
829
+ * When example(foo, ..) produces graphics on an interactive device
830
+ it needs to open itself, it now leaves devAskNewPage() unchanged
831
+ even when it was FALSE, thus fixing a 14 years old '<FIXME>'.
832
+
833
+ * packageDescription() again catches errors from encoding
834
+ conversions. This also fixes broken packageVersion() in C locale
835
+ on systems where iconv does not support transliteration.
836
+
837
+ CHANGES IN R 4.2.2:
838
+
839
+ NEW FEATURES:
840
+
841
+ * tools::Rdiff(useDiff = TRUE) checks for the presence of an
842
+ external diff command and switches to useDiff = FALSE if none is
843
+ found. This allows R CMD Rdiff to always work.
844
+
845
+ * On Windows, environment variable R_LIBCURL_SSL_REVOKE_BEST_EFFORT
846
+ can be used to switch to only 'best-effort' SSL certificate
847
+ revocation checks with the default "libcurl" download method.
848
+ This reduces security, but may be needed for downloads to work
849
+ with MITM proxies (PR#18379).
850
+
851
+ * (macOS) The run-time check for libraries from XQuartz for X11 and
852
+ Tcl/Tk no longer uses otool from the Apple Developer Tools
853
+ (PR#18400).
854
+
855
+ * The LaTeX style for producing the PDF manuals, Rd.sty, now loads
856
+ the standard amsmath, amsfonts and amssymb packages for greater
857
+ coverage of math commands in the Rd \eqn and \deqn macros. The
858
+ \mathscr LaTeX command is also provided (via the mathrsfs
859
+ package, if available, or the amsfonts bundle otherwise),
860
+ fulfilling the wish of PR#18398.
861
+
862
+ * (Windows) The default format of readClipboard() and
863
+ writeClipboard() has been changed to 13 (CF_UNICODETEXT).
864
+
865
+ INSTALLATION on a UNIX-ALIKE:
866
+
867
+ * The PDF manuals (if built) can be compacted by the new target
868
+ make compact-pdf (at the top level or in directory doc/manual).
869
+
870
+ * There is now configure support for LLVM clang 15 on Linux, which
871
+ defaults to position-independent (PIE) executables whereas
872
+ gfortran does not.
873
+
874
+ * Many small changes to ease compilation (and suppress warnings)
875
+ with LLVM clang 15.
876
+
877
+ BUG FIXES:
878
+
879
+ * Rscript -e would fail if stdin were closed (Reported by Henrik
880
+ Bengtsson.)
881
+
882
+ * qt(*, log.p=TRUE) in outer tails no longer produces NaN in its
883
+ final steps, thus fixing PR#18360.
884
+
885
+ * tools::Rd2latex() now escapes hashes and ampersands when writing
886
+ URLs, fixing LaTeX errors with such URLs in \tabular.
887
+
888
+ * When isGeneric(f, fdef=*) is used with mismatching names, the
889
+ warning is better understandable; reported (with fix) in PR#18370
890
+ by Gabe Becker.
891
+
892
+ * poly(x, n) now works again (and is now documented) when x is a
893
+ "Date" or "POSIXct" object, or of another class while fulfilling
894
+ mode(x) == "numeric". This also enables poly(x, *, raw=TRUE) for
895
+ such variables. Reported by Michael Chirico to R-devel.
896
+
897
+ * write.table(), write.csv() and write.csv2() restore their
898
+ numerical precision (internal equivalent of digits = 15) after an
899
+ interrupt (PR#18384).
900
+
901
+ * One can now read also byte FF from a clipboard connection
902
+ (PR#18385).
903
+
904
+ * source("") and source(character()) now give more helpful error
905
+ messages.
906
+
907
+ * R CMD check --as-cran set _R_CHECK_TIMINGS_ too late to have the
908
+ intended effect.
909
+
910
+ * as.POSIXlt(x) now also works with very large dates x, fixing
911
+ PR#18401 reported by Hannes M?hleisen.
912
+
913
+ * Files can now be extracted even from very large zip archives
914
+ (PR#18390, thanks to Martin Jakt).
915
+
916
+ * Non-finite objects of class "POSIXlt" are now correctly coerced
917
+ to classes "Date" and "POSIXct"; following up on the extension to
918
+ format() them correctly.
919
+
920
+ * Added methods for is.finite(), is.infinite() and is.nan() for
921
+ "POSIXlt" date-time objects.
922
+
923
+ BUG FIXES on Windows:
924
+
925
+ * Non-ASCII characters are now properly displayed on Windows in
926
+ windows created using GraphApp via e.g. winDialogString thanks to
927
+ a workaround for an at least surprising Windows behavior with
928
+ UTF-8 as the system encoding (PR#18382).
929
+
930
+ * Find and replace operations work again in the script editor in
931
+ Rgui on Windows.
932
+
933
+ * Computation of window size based on requested client size in
934
+ GraphApp when running in a multi-byte locale on Windows has been
935
+ fixed (regression in R 4.2.0 for users of systems where R 4.1
936
+ used a single-byte locale). Rgui again respects the number of
937
+ console rows and columns given in Rconsole file.
938
+
939
+ * Rterm support for Alt+xxx sequences has been fixed to produce the
940
+ corresponding character (only) once. This fixes pasting text with
941
+ tilde on Italian keyboard (PR#18391).
942
+
943
+ CHANGES IN R 4.2.1:
944
+
945
+ NEW FEATURES:
946
+
947
+ * New function utils::findCRANmirror() to find out if a CRAN mirror
948
+ has been selected, otherwise fallback to the main site. This
949
+ behaves in the same way as tools::CRAN_package_db() and is
950
+ intended for packages wishing to access CRAN for purposes other
951
+ than installing packages.
952
+
953
+ The need for this was shown by a day when the main CRAN website
954
+ was offline and a dozen or so packages which had its URL
955
+ hardcoded failed their checks.
956
+
957
+ INSTALLATION on a UNIX-ALIKE:
958
+
959
+ * The libraries searched for by --with-blas (without a value) now
960
+ include BLIS (after OpenBLAS but before ATLAS). And on macOS,
961
+ the Accelerate framework (after ATLAS). (This is patterned after
962
+ the AX_BLAS macro from the Autoconf Archive.)
963
+
964
+ * The included LAPACK sources have been updated to 3.10.1.
965
+
966
+ UTILITIES:
967
+
968
+ * The (full path to) the command tidy to be used for HTML
969
+ validation can be set by environment variable R_TIDYCMD.
970
+
971
+ * Setting environment variable _R_CHECK_RD_VALIDATE_RD2HTML_ to a
972
+ false value will override R CMD check --as-cran and turn off HTML
973
+ validation. This provides a way to circumvent a problematic
974
+ tidy.
975
+
976
+ The 2006 version that ships with macOS is always skipped.
977
+
978
+ C-LEVEL FACILITIES:
979
+
980
+ * The undocumented legacy declarations of Sint, Sfloat, SINT_MAX
981
+ and SINT_MIN in header R.h are deprecated.
982
+
983
+ BUG FIXES:
984
+
985
+ * fisher.test(d) no longer segfaults for "large" d; fixing PR#18336
986
+ by preventing/detecting an integer overflow reliably.
987
+
988
+ * tar(., files=*) now produces correctly the warning about invalid
989
+ uid or gid of files, fixing PR#18344, reported by Martin Morgan.
990
+
991
+ * tk_choose.files() with multi = FALSE misbehaved on paths
992
+ containing spaces (PR#18334) (regression introduced in R 4.0.0).
993
+
994
+ * sort(x, partial = ind, *) now works correctly notably for the
995
+ non-default na.last = FALSE or TRUE, fixing PR#18335 reported by
996
+ James Edwards.
997
+
998
+ * Environment variable _R_CHECK_XREFS_REPOSITORIES_ is only used
999
+ for checking .Rd cross-references in R CMD check (as documented)
1000
+ and not for other uses looking for a CRAN mirror.
1001
+
1002
+ * The search for a CRAN mirror when checking packages now uses
1003
+ getOption("repos") if that specifies a CRAN mirror, even when it
1004
+ does not also specify all three Bioconductor repositories (as was
1005
+ previously required).
1006
+
1007
+ * The HTML code generated by tools::Rd2HTML() has been improved to
1008
+ pass tidy 5.8.0.
1009
+
1010
+ BUG FIXES on Windows:
1011
+
1012
+ * Writing to a clipboard connection works again, fixing a
1013
+ regression in R 4.2.0 (PR#18332). Re-using a closed clipboard
1014
+ connection longer issues a spurious warning about an ignored
1015
+ encoding argument.
1016
+
1017
+ * C function getlocale no longer attempts to query an unsupported
1018
+ category from the OS, even when requested at R level, which may
1019
+ cause crashes when R 4.2.0 (which uses UCRT) is embedded
1020
+ (reported by Kevin Ushey).
1021
+
1022
+ * Accent keys now work in GraphApp Unicode windows, which are used
1023
+ by Rgui whenever running in a multibyte locale (so also in UTF-8,
1024
+ hence fixing a regression in R 4.2.0 for users of systems where R
1025
+ 4.1 used a single-byte locale).
1026
+
1027
+ * Completion in Rgui now works also with non-ASCII characters.
1028
+
1029
+ * Rgui no longer truncates usage information with --help.
1030
+
1031
+ * Text injection from external applications via SendInput now works
1032
+ in GraphApp Unicode windows, fixing a regression in R 4.2.0 for
1033
+ Rgui users of systems where R 4.1 used a single-byte locale but R
1034
+ 4.2.0 uses UTF-8.
1035
+
1036
+ * Performance of txtProgressBar() in Rgui when running in a
1037
+ multi-byte locale has been improved (fixing a performance
1038
+ regression in R 4.2.0 for users of systems where R 4.1 used a
1039
+ single-byte locale).
1040
+
1041
+ * The script editor in Rgui now works also on systems using UTF-8
1042
+ as the native encoding. Users of the script editor have to
1043
+ convert their scripts with non-ASCII characters to UTF-8 before
1044
+ reading them in R 4.2.1 or newer (on recent Windows where UTF-8
1045
+ is used). This fixes a regression in R 4.2.0, which prevented
1046
+ some operations with scripts when they contained non-ASCII
1047
+ characters.
1048
+
1049
+ CHANGES IN R 4.2.0:
1050
+
1051
+ SIGNIFICANT USER-VISIBLE CHANGES:
1052
+
1053
+ * The formula method of aggregate() now matches the generic in
1054
+ naming its first argument x (resolving PR#18299 by Thomas
1055
+ Soeiro).
1056
+
1057
+ This means that calling aggregate() with a formula as a named
1058
+ first argument requires name formula in earlier versions of R and
1059
+ name x now, so portable code should not name the argument (code
1060
+ in many packages did).
1061
+
1062
+ * Calling && or || with either argument of length greater than one
1063
+ now gives a warning (which it is intended will become an error).
1064
+
1065
+ * Calling if() or while() with a condition of length greater than
1066
+ one gives an error rather than a warning. Consequently,
1067
+ environment variable _R_CHECK_LENGTH_1_CONDITION_ no longer has
1068
+ any effect.
1069
+
1070
+ * Windows users should consult the WINDOWS section below for some
1071
+ profound changes including
1072
+
1073
+ * Support for 32-bit builds has been dropped.
1074
+
1075
+ * UTF-8 locales are used where available.
1076
+
1077
+ * The default locations for the R installation and personal
1078
+ library folder have been changed.
1079
+
1080
+ Thanks to Tomas Kalibera for months of work on the Windows port
1081
+ for this release.
1082
+
1083
+ NEW FEATURES:
1084
+
1085
+ * matrix(x, n, m) now warns in more cases where length(x) differs
1086
+ from n * m, as suggested by Abby Spurdle and Wolfgang Huber in
1087
+ Feb 2021 on the R-devel mailing list.
1088
+
1089
+ This warning can be turned into an error by setting environment
1090
+ variable _R_CHECK_MATRIX_DATA_ to TRUE: R CMD check --as-cran
1091
+ does so unless it is already set.
1092
+
1093
+ * Function file_test() in package utils gains tests for symlinks,
1094
+ readability and writability.
1095
+
1096
+ * capabilities("libxml") is now false.
1097
+
1098
+ The description of capabilities("http/ftp") now reflects that it
1099
+ refers to the default method, no longer the internal one.
1100
+
1101
+ * simplify2array() gains an except argument for controlling the
1102
+ exceptions used by sapply().
1103
+
1104
+ * Environment variables R_LIBS_USER and R_LIBS_SITE are both now
1105
+ set to the R system default if unset or empty, and can be set to
1106
+ NULL to indicate an empty list of user or site library
1107
+ directories.
1108
+
1109
+ * The warning for axis()(-like) calls in cases of relatively small
1110
+ ranges (typically in log-scale situations) is slightly improved
1111
+ _and_ suppressed from explicit calls to .axisPars() as has always
1112
+ been the intention.
1113
+
1114
+ * The contrasts setter function `contrasts<-` gains an explicit
1115
+ default how.many = NULL rather than just using missing(how.many).
1116
+
1117
+ * grid.pretty() gains a new optional argument n = 5.
1118
+
1119
+ * There is a new function .pretty() with option bounds as a
1120
+ technical-utility version of pretty(). It and pretty() gain a
1121
+ new argument f.min with a better than back-compatible default.
1122
+
1123
+ * Function grDevices::axisTicks() and related functions such as
1124
+ graphics::axis() work better, notably for the log scale; partly
1125
+ because of the pretty() improvements, but also because care is
1126
+ taken e.g., when ylim is finite but diff(ylim) is infinite.
1127
+
1128
+ * nclass.FD() gains a digits option.
1129
+
1130
+ * The R Mathlib internal C function bd0() (called indirectly from a
1131
+ dozen probability density and distribution functions such as
1132
+ dpois(), dbinom(), dgamma(), pgamma() _etc_) has been
1133
+ complemented by a more sophisticated and (mostly) more accurate C
1134
+ function ebd0(), currently called only by internal dpois_raw()
1135
+ improving accuracy for R level dpois() and potentially others
1136
+ calling it such as dnbinom(), dgamma() or pgamma(). (Thanks to
1137
+ Morten Welinder's PR#15628.)
1138
+
1139
+ * write.ftable() gains sep = " " argument as suggested by Thomas
1140
+ Soeiro.
1141
+
1142
+ * The names of the locale categories supported by R's
1143
+ Sys.getlocale() and Sys.setlocale() are now provided by variable
1144
+ .LC.categories in the base namespace.
1145
+
1146
+ * The Date and POSIXt methods for hist() and the histogram method
1147
+ for plot() now also use the new default col = "lightgray" in
1148
+ consistency with the corresponding change to hist()'s default for
1149
+ R 4.0.0.
1150
+
1151
+ * hist.default() gains new fuzz argument, and the histogram plot
1152
+ method no longer uses fractional axis ticks when displaying
1153
+ counts ("Frequency").
1154
+
1155
+ * mapply() and hence Map() now also obey the "max-or-0-if-any"
1156
+ recycling rule, such that, e.g., Map(`+`, 1:3, 1[0]) is valid
1157
+ now.
1158
+
1159
+ * as.character(<obj>) for "hexmode" or "octmode" objects now
1160
+ fulfils the important basic rule as.character(x)[j] ===
1161
+ as.character(x[j]).
1162
+
1163
+ * The set utility functions, notably intersect() have been tweaked
1164
+ to be more consistent and symmetric in their two set arguments,
1165
+ also preserving a common mode.
1166
+
1167
+ * substr(ch, start,end) <- new now e.g., preserves names(ch); ditto
1168
+ for substring(), thanks to a patch from Brodie Gaslam.
1169
+
1170
+ * plot(<lm>) gains a extend.ylim.f argument, in partial response to
1171
+ PR#15285; further PR#17784 is fixed thanks to several
1172
+ contributors and a patch by Elin Waring. The Cook's dist
1173
+ contours get customizable via cook.col and cook.lty with a
1174
+ different default color and their legend is nicer by default and
1175
+ customizable via cook.legendChanges.
1176
+
1177
+ * Attempting to subset an object that is not subsettable now
1178
+ signals an error of class notSubsettableError. The
1179
+ non-subsettable object is contained in the object field of the
1180
+ error condition.
1181
+
1182
+ * Subscript-out-of-bounds errors are now signaled as errors of
1183
+ class subscriptOutOfBoundsError.
1184
+
1185
+ * Stack-overflow errors are now signaled as errors inheriting from
1186
+ class stackOverflowError. See ?stackOverflowError for more
1187
+ details.
1188
+
1189
+ * New partly experimental Sys.setLanguage() utility, solving the
1190
+ main problem of PR#18055.
1191
+
1192
+ * gettext() and gettextf() get a new option trim = TRUE which when
1193
+ set to false allows translations for strings such as "Execution
1194
+ halted\n" typical for C code.
1195
+
1196
+ * An experimental implementation of hash tables is now available.
1197
+ See ?hashtab for more details.
1198
+
1199
+ * identical() gains a extptr.as.ref argument for requesting that
1200
+ external pointer objects be compared as reference objects.
1201
+
1202
+ * reorder() gets an argument decreasing which it passes to sort()
1203
+ for level creation; based on the wish and patch by Thomas Soeiro
1204
+ in PR#18243.
1205
+
1206
+ * as.vector() gains a data.frame method which returns a simple
1207
+ named list, also clearing a long standing 'FIXME' to enable
1208
+ as.vector(<data.frame>, mode="list"). This breaks code relying
1209
+ on as.vector(<data.frame>) to return the unchanged data frame.
1210
+
1211
+ * legend() is now vectorized for arguments cex, x.intersp, and
1212
+ text.width. The latter can now also be specified as a vector
1213
+ (one element for each column of the legend) or as NA for
1214
+ computing a proper column wise maximum value of strwidth(legend).
1215
+ The argument y.intersp can be specified as a vector with one
1216
+ entry for each row of the legend.
1217
+
1218
+ legend() also gains new arguments title.cex and title.font.
1219
+ Thanks to Swetlana Herbrandt.
1220
+
1221
+ * Deparsing no longer remaps attribute names dim, dimnames, levels,
1222
+ names and tsp to historical S-compatible names (which structure()
1223
+ maps back).
1224
+
1225
+ * sample() and sample.int() have additional sanity checks on their
1226
+ size and n arguments.
1227
+
1228
+ all.equal.numeric() gains a sanity check on its tolerance
1229
+ argument - calling all.equal(a, b, c) for three numeric vectors
1230
+ is a surprisingly common error.
1231
+
1232
+ mean(na.rm =), rank(na.last =), barplot(legend.text =),
1233
+ boxplot(), contour(drawlabels =), polygon(border =) and
1234
+ methods::is(class2 =) have more robust sanity checks on their
1235
+ arguments.
1236
+
1237
+ R CMD Rd2pdf (used by R CMD check) has a more robust sanity check
1238
+ on the format of \alias{} commands.
1239
+
1240
+ * psigamma(x, deriv) for negative x now also works for deriv = 4
1241
+ and 5; their underlying C level dpsifn() is documented in
1242
+ 'Writing R Extensions'.
1243
+
1244
+ * The HTML help system now uses HTML5 (wish of PR#18149).
1245
+
1246
+ * ks.test() now provides exact p-values also with ties and MC
1247
+ p-values in the two-sample (Smirnov) case. By Torsten Hothorn.
1248
+
1249
+ * ks.test() gains a formula interface, with y ~ 1 for the
1250
+ one-sample (Kolmogorov) test and y ~ group for the two-sample
1251
+ (Smirnov) test. Contributed by Torsten Hothorn.
1252
+
1253
+ * The return value from ks.test() now has class c("ks.test",
1254
+ "htest") - packages using try() need to take care to use
1255
+ inherits() and not == on the class.
1256
+
1257
+ * New functions psmirnov(), qsmirnov() and rsmirnov() in package
1258
+ stats implementing the asymptotic and exact distributions of the
1259
+ two-sample Smirnov statistic.
1260
+
1261
+ * iconv() now allows sub = "c99" to use C99-style escapes for UTF-8
1262
+ inputs which cannot be converted to encoding to.
1263
+
1264
+ * In a forward pipe |> expression it is now possible to use a named
1265
+ argument with the placeholder _ in the rhs call to specify where
1266
+ the lhs is to be inserted. The placeholder can only appear once
1267
+ on the rhs.
1268
+
1269
+ * The included LAPACK sources have been updated to version 3.10.0,
1270
+ except for the four Fortran 77 routines which 3.10.0 has
1271
+ re-implemented in Fortran 90 (where the older versions have been
1272
+ retained as the R build process does not support Fortran 90).
1273
+
1274
+ * path.expand() and most other uses of tilde expansion now warn if
1275
+ a path would be too long if expanded. (An exception is
1276
+ file.exists(), which silently returns false.)
1277
+
1278
+ * trunc(<Date>, *) now supports units = "months" or "years" for
1279
+ consistency with the POSIXt method, thanks to Dirk Eddelbuettel's
1280
+ proposal in PR#18099.
1281
+
1282
+ * list2DF() now checks that its arguments are of the same length,
1283
+ rather than use recycling.
1284
+
1285
+ * The HTML help system has several new features: LaTeX-like math
1286
+ can be typeset using either KaTeX or MathJax, usage and example
1287
+ code is highlighted using Prism, and for dynamic help the output
1288
+ of examples and demos can be shown within the browser if the
1289
+ knitr package is installed. These features can be disabled by
1290
+ setting the environment variable _R_HELP_ENABLE_ENHANCED_HTML_ to
1291
+ a false value.
1292
+
1293
+ GRAPHICS:
1294
+
1295
+ * The graphics engine version, R_GE_version, has been bumped to 15
1296
+ and so packages that provide graphics devices should be
1297
+ reinstalled.
1298
+
1299
+ * The grid package now allows the user to specify a "vector" of
1300
+ pattern fills. The fill argument to gpar() accepts a list of
1301
+ gradients and/or patterns and the functions linearGradient(),
1302
+ radialGradient(), and pattern() have a new group argument.
1303
+
1304
+ Points grobs (data symbols) can now also have a pattern fill.
1305
+
1306
+ The grobCoords() function now returns a more informative and
1307
+ complex result.
1308
+
1309
+ * The grid package has new functions for drawing isolated groups:
1310
+ grid.group(), grid.define(), and grid.use(). These functions add
1311
+ compositing operators and affine transformations to R's graphics
1312
+ capabilities.
1313
+
1314
+ The grid package also has new functions for stroking and filling
1315
+ paths: grid.stroke(), grid.fill(), and grid.fillStroke().
1316
+
1317
+ A new function as.path() allows the user to specify the fill rule
1318
+ for a path that is to be used for clipping, stroking, or filling;
1319
+ available options are "winding" and "evenodd". A new function
1320
+ as.mask() allows the user to specify the type of a mask;
1321
+ available options are "alpha" and "luminance".
1322
+
1323
+ These new features are only supported so far (at most) on the
1324
+ Cairo-based graphics devices and on the pdf() device.
1325
+
1326
+ * dev.capabilities() reports on device support for the new
1327
+ features.
1328
+
1329
+ * par() now warns about unnamed non-character arguments to prevent
1330
+ misuse such as {usr <- par("usr"); par(usr)}.
1331
+
1332
+ WINDOWS:
1333
+
1334
+ * R uses UTF-8 as the native encoding on recent Windows systems (at
1335
+ least Windows 10 version 1903, Windows Server 2022 or Windows
1336
+ Server 1903). As a part of this change, R uses UCRT as the C
1337
+ runtime. UCRT should be installed manually on systems older than
1338
+ Windows 10 or Windows Server 2016 before installing R.
1339
+
1340
+ * The default personal library on Windows, folder R\win-library\x.y
1341
+ where x.y stands for R release x.y.z, is now a subdirectory of
1342
+ Local Application Data directory (usually a hidden directory
1343
+ C:\Users\username\AppData\Local). Use shell.exec(.libPaths()[1])
1344
+ from R to open the personal library in Explorer when it is first
1345
+ in the list (PR#17842).
1346
+
1347
+ * R uses a new 64-bit Tcl/Tk bundle. The previous 32-bit/64-bit
1348
+ bundle had a different layout and can no longer be used.
1349
+
1350
+ * Make files and installer scripts for Windows have been tailored
1351
+ to Rtools42, the newly recommended 64-bit gcc 10.3 MinGW-W64 UCRT
1352
+ toolchain.
1353
+
1354
+ * Rtools42 by default uses the Windows security features ASLR and
1355
+ DEP; hence CRAN builds of R and packages also do.
1356
+
1357
+ * R now supports files Makevars.ucrt, Makefile.ucrt, configure.ucrt
1358
+ and cleanup.ucrt in packages, which are used in preference to the
1359
+ .win variants. This allows keeping the .win files around to
1360
+ support older versions of R. This feature will be removed in the
1361
+ future once support for older versions of R would no longer be
1362
+ needed.
1363
+
1364
+ * R.version gains a new field crt (only on Windows) to denote the C
1365
+ runtime. The value is "ucrt".
1366
+
1367
+ * On Windows, download.file(method = "auto") and url(method =
1368
+ "default") now follow Unix in using "libcurl" for all except
1369
+ file:// URIs.
1370
+
1371
+ * Rtools42 includes an unpatched Msys2 build of GNU tar. Paths
1372
+ including drive letters can be made to work by adding
1373
+ --force-local to environment variable TAR_OPTIONS. (Rtools40 and
1374
+ earlier included a patched version which defaulted to this
1375
+ option.)
1376
+
1377
+ * Installer builds of R automatically find the Rtools42 software
1378
+ collection as well as the compiler toolchain. No PATH setting is
1379
+ required from the user.
1380
+
1381
+ * The default installation directory of R for a user-only
1382
+ installation has been changed to the User Program Files directory
1383
+ (usually a hidden directory
1384
+ C:\Users\username\AppData\Local\Programs) to follow Windows
1385
+ conventions. Use shell.exec(R.home()) from R to open the R
1386
+ installation directory in Explorer (PR#17842).
1387
+
1388
+ * R now supports installation-time patching of packages. Patches
1389
+ may be installed from a supplied URL or a local directory or
1390
+ disabled. Patches are included into the installed packages for
1391
+ reference. This experimental feature may be removed in the
1392
+ future.
1393
+
1394
+ * libcurl is now required for building from source.
1395
+
1396
+ * The clipboard connection now works also with text in other than
1397
+ the current native encoding (PR#18267, with Hiroaki Yutani).
1398
+ Text is always pasted to the clipboard in UTF16-LE and the
1399
+ encoding argument is ignored.
1400
+
1401
+ * The internal case-changing functions are now used by default on
1402
+ Windows - this circumvents problems (for example with E acute) of
1403
+ the UCRT Windows' runtime.
1404
+
1405
+ * R on Windows now uses the system memory allocator. Doug Lea's
1406
+ allocator was used since R 1.2.0 to mitigate performance
1407
+ limitations seen with system allocators on earlier versions of
1408
+ Windows.
1409
+
1410
+ * memory.limit() and memory.size() are now stubs on Windows (as on
1411
+ Unix-alikes).
1412
+
1413
+ * Applications embedding R on Windows can now use additional
1414
+ callbacks, which have so far only been available only on Unix
1415
+ (PR#18286).
1416
+
1417
+ INSTALLATION:
1418
+
1419
+ * Facilities for accessing ftp:// sites are no longer tested
1420
+ (except _pro tem_ for curlGetHeaders()) as modern browsers have
1421
+ removed support.
1422
+
1423
+ * R can now be built with DEFS = -DSTRICT_R_HEADERS .
1424
+
1425
+ PACKAGE INSTALLATION:
1426
+
1427
+ * R CMD INSTALL no longer tangles vignettes. This completes an R
1428
+ CMD build change in R 3.0.0 and affects packages built before R
1429
+ 3.0.2. Such packages should be re-made with R CMD build to have
1430
+ the tangled R code of vignettes shipped with the tarball.
1431
+
1432
+ * USE_FC_LEN_T will become the default: this uses the correct
1433
+ prototypes for Fortran BLAS/LAPACK routines called from C/C++,
1434
+ and requires adjustment of most such calls - see 'Writing R
1435
+ Extensions' ?6.6.1. (This has been supported since R 3.6.2.)
1436
+
1437
+ * Package installation speed for packages installed with
1438
+ keep.source has been improved. This resolve the issue reported by
1439
+ Ofek Shilon in PR#18236.
1440
+
1441
+ UTILITIES:
1442
+
1443
+ * R CMD check can optionally report files/directories left behind
1444
+ in home, /tmp (even though TMPDIR is set) and other directories.
1445
+ See the "R Internals" manual for details.
1446
+
1447
+ * R CMD check now reports byte-compilation errors during
1448
+ installation. These are not usually fatal but may result in
1449
+ parts of the package not being byte-compiled.
1450
+
1451
+ * _R_CHECK_DEPENDS_ONLY_ can be applied selectively to examples,
1452
+ tests and/or vignettes in R CMD check: see the "R Internals"
1453
+ manual.
1454
+
1455
+ * _R_CHECK_SRC_MINUS_W_IMPLICIT_ now defaults to true: recent
1456
+ versions of Apple clang on macOS have made implicit function
1457
+ declarations in C into a compilation error.
1458
+
1459
+ * R CMD check --as-cran makes use of the environment variable
1460
+ AUTORECONF. See the "R Internals" manual ?8 for further details.
1461
+
1462
+ * R CMD check --use-valgrind also uses valgrind when re-building
1463
+ vignettes as some non-Sweave vignettes unhelpfully comment out
1464
+ all their code when R CMD check runs vignettes.
1465
+
1466
+ * Errors in re-building vignettes (unless there are LaTeX errors)
1467
+ are reported by R CMD check as ERROR rather than WARNING when
1468
+ running vignettes has been skipped (as it frequently is in CRAN
1469
+ checks and by --as-cran).
1470
+
1471
+ * R CMD Rd2pdf gains a --quiet option that is used by R CMD build
1472
+ when building the PDF package manual.
1473
+
1474
+ * R CMD Rd2pdf now always runs LaTeX in batch mode, consistent with
1475
+ Texinfo >= 6.7. The --batch option is ignored.
1476
+
1477
+ * R CMD build and R CMD check now include the Rd file name and line
1478
+ numbers in the error message of an \Sexpr evaluation failure.
1479
+
1480
+ * For packages using the \doi Rd macro (now an install-time \Sexpr)
1481
+ but no other dynamic Rd content, R CMD build now produces a
1482
+ smaller tarball and is considerably faster - skipping temporary
1483
+ package installation.
1484
+
1485
+ * R CMD check can optionally (but included in --as-cran) validate
1486
+ the HTML produced from the packages .Rd files. See
1487
+ <https://blog.r-project.org/2022/04/08/enhancements-to-html-documentation/>:
1488
+ this needs a fairly recent version of HTML Tidy to be available.
1489
+
1490
+ C-LEVEL FACILITIES:
1491
+
1492
+ * The non-API header R_ext/R-ftp-http.h is no longer provided, as
1493
+ the entry points it covered are now all defunct.
1494
+
1495
+ * A number of non-API declarations and macro definitions have been
1496
+ moved from the installed header Rinternals.h to the internal
1497
+ header Defn.h. Packages that only use entry points and
1498
+ definitions documented to be part of the API as specified in
1499
+ 'Writing R Extensions' ?6 should not be affected.
1500
+
1501
+ * The macro USE_RINTERNALS no longer has any effect when compiling
1502
+ package code. Packages which also use R_NO_REMAP will need to
1503
+ ensure that the remapped names are used for calls to API
1504
+ functions that were formerly also made available as macros.
1505
+
1506
+ * The deprecated legacy S-compatibility macros PROBLEM, MESSAGE,
1507
+ ERROR, WARN, WARNING, RECOVER, ... are no longer defined in
1508
+ R_exts/RS.h (included by R.h). Replace these by calls to
1509
+ Rf_error and Rf_warning (defined in header R_ext/Error.h included
1510
+ by R.h).
1511
+
1512
+ Header R_ext/RS.h no longer includes R_ext/Error.h.
1513
+
1514
+ * Header R_ext/Constants.h (included by R.h) when included from C++
1515
+ now includes the C++ header cfloat rather than the C header
1516
+ float.h (now possible as C++11 is required).
1517
+
1518
+ * The legacy S-compatibility macros DOUBLE_* in R_ext/Constants.h
1519
+ (included by R.h) are deprecated.
1520
+
1521
+ * The deprecated S-compatibility macros SINGLE_* in
1522
+ R_ext/Constants.h (included by R.h) have been removed.
1523
+
1524
+ * R_Calloc, R_Free and R_Realloc are preferred to their unprefixed
1525
+ forms and error messages now use the prefix. These forms were
1526
+ introduced in R 3.4.0 and are available even when
1527
+ STRICT_R_HEADERS is defined.
1528
+
1529
+ * rmultinom has been documented in 'Writing R Extensions' ?6 so is
1530
+ now part of the R API.
1531
+
1532
+ * Similarly, Rtanpi, called from R level tanpi() is now part of the
1533
+ R API.
1534
+
1535
+ * The long-deprecated, undocumented and non-API entry point call_R
1536
+ is no longer declared in R_ext/RS.h (included by R.h).
1537
+
1538
+ * The header S.h which has been unsupported since Jan 2016 has been
1539
+ removed. Use R.h instead.
1540
+
1541
+ DEPRECATED AND DEFUNCT:
1542
+
1543
+ * The (non-default and deprecated) method = "internal" for
1544
+ download.file() and url() no longer supports http:// nor ftp://
1545
+ URIs. (It is used only for file:// URIs.)
1546
+
1547
+ On Windows, download.file(method = "wininet") no longer supports
1548
+ ftp:// URIs. (It is no longer the default method, which is
1549
+ "libcurl" and does.)
1550
+
1551
+ On Windows, the deprecated method = "wininet" now gives a warning
1552
+ for http:// and https:// URIs for both download.file() and url().
1553
+ (It is no longer the default method.)
1554
+
1555
+ * On Windows, the command-line option --max-mem-size and
1556
+ environment variable R_MAX_MEM_SIZE are defunct. The memory
1557
+ allocation limit was important for 32-bit builds, but these are
1558
+ no longer supported.
1559
+
1560
+ * default.stringsAsFactors() is now formally deprecated, where that
1561
+ was only mentioned on its regular help page, previously. So it
1562
+ now gives a warning if called.
1563
+
1564
+ * unix.time() is defunct now; it had been deprecated since R 3.4.0.
1565
+
1566
+ BUG FIXES:
1567
+
1568
+ * Setting digits = 0 in format(), print.default() (and hence
1569
+ typically print()) or options() is again invalid. Its behaviour
1570
+ was platform-dependent, and it is unclear what "zero significant
1571
+ digits" should mean (PR#18098).
1572
+
1573
+ * Messages from C code in the cairo section of package grDevices
1574
+ are now also offered for translation, thanks to Michael Chirico's
1575
+ PR#18123.
1576
+
1577
+ * mean(x) with finite x now is finite also without "long.double"
1578
+ capability.
1579
+
1580
+ * R CMD Rd2pdf no longer leaves an empty build directory behind
1581
+ when it aborts due to an already existing output file. (Thanks
1582
+ to Sebastian Meyer's PR#18141.)
1583
+
1584
+ * density(x, weights = w, na.rm = TRUE) when anyNA(x) is true, now
1585
+ removes weights "in parallel" to x, fixing PR#18151, reported by
1586
+ Matthias Gondan. Additionally, it gets a subdensity option.
1587
+
1588
+ * Conversion of \Sexpr[]{<expR>} to LaTeX or HTML no longer
1589
+ produces long blocks of empty lines when <expR> itself contains
1590
+ several lines all producing empty output. Thanks to a report and
1591
+ patch by Ivan Krylov posted to R-devel.
1592
+
1593
+ * R CMD build no longer fails if a package vignette uses child
1594
+ documents and inst/doc exists. (Thanks to Sebastian Meyer's
1595
+ PR#18156.)
1596
+
1597
+ * When an R documentation ('help' source) file man/foo.Rd in a
1598
+ package has \donttest{..} examples with a syntax error, it is now
1599
+ signalled as ERROR and with correct line numbers relating to the
1600
+ *-Ex.R file, thanks to Duncan Murdoch and Sebastian Meyer's
1601
+ reports and patch proposals in PR#17501.
1602
+
1603
+ * Improved determination of the correct translation domain in
1604
+ non-base packages, addressing the combination of PR#18092 and
1605
+ PR#17998 (#c6) with reports and _augmented_ patch #2904 by
1606
+ Suharto Anggono.
1607
+
1608
+ Note that "R-base" is no longer the default domain e.g., for
1609
+ top-level calls to gettext(); rather translation needs explicit
1610
+ domain = * specification in such cases.
1611
+
1612
+ * identical(attrib.as.set=FALSE) now works correctly with data
1613
+ frames with default row names (Thanks to Charlie Gao's PR#18179).
1614
+
1615
+ * txtProgressBar() now enforces a non-zero width for argument char,
1616
+ without which no progress can be visible.
1617
+
1618
+ * dimnames(table(d)) is more consistent in the case where d is a
1619
+ list with a single component, thanks to Thomas Soeiro's report to
1620
+ R-devel.
1621
+
1622
+ Further, table(d1, d2) now gives an error when d1 and d2 are data
1623
+ frames as suggested by Thomas in PR#18224.
1624
+
1625
+ * Fix for drawing semi-transparent lines and fills on the native
1626
+ Windows graphics device (PR#18219 and PR#16694). Thanks to Nick
1627
+ Ray for helpful diagnosis on Bugzilla.
1628
+
1629
+ * The deparser now wraps sub-expressions such as if(A) .. with
1630
+ parentheses when needed; thanks to Duncan Murdoch's PR#18232 and
1631
+ Lionel Henry's patches there.
1632
+
1633
+ * remove.packages() no longer tries to uninstall Priority: base
1634
+ packages, thanks to a report and suggestions by Colin Fay in
1635
+ PR#18227.
1636
+
1637
+ * win.metafile() now has xpinch and ypinch arguments so that the
1638
+ user can override Windows' (potentially wrong) guess at device
1639
+ dimensions.
1640
+
1641
+ * x[i] and x[[i]] for non-integer i should now behave in all cases
1642
+ as always documented: the index used is equivalent to
1643
+ as.integer(i) unless that would overflow where trunc(i) is used
1644
+ instead; thanks to Suharto Anggono's report and patch proposals
1645
+ in PR#17977.
1646
+
1647
+ * asOneSidedFormula() now associates the resulting formula with the
1648
+ global environment rather than the evaluation environment created
1649
+ for the call.
1650
+
1651
+ * <bibentry>$name now matches the field name case-insensitively,
1652
+ consistent with bibentry() creation and the replacement method.
1653
+
1654
+ * cbind() failed to detect some length mismatches with a mixture of
1655
+ time-series and non-time-series inputs.
1656
+
1657
+ * The default LaTeX style file Sweave.sty used by the RweaveLatex
1658
+ driver no longer loads the obsolete ae package; thanks to a
1659
+ report by Thomas Soeiro in PR#18271. Furthermore, it now skips
1660
+ \usepackage[T1]{fontenc} for engines other than pdfTeX (if
1661
+ detected) or if the new [nofontenc] option is used.
1662
+
1663
+ * smooth.spline() now stores its logical cv argument more safely,
1664
+ fixing a rare bug when printing, and also stores n.
1665
+
1666
+ * smooth.spline(x,y,*) now computes the cv.crit statistic
1667
+ correctly, also when is.unsorted(x), fixing PR#18294.
1668
+
1669
+ * The data.frame method of rbind() now warns when binding
1670
+ not-wholly-recycling vectors, by analogy to the default method
1671
+ (for matrices).
1672
+
1673
+ * setAs() finds the correct class for name to when multiple
1674
+ packages define a class with that name. Thanks to Gabor Csardi
1675
+ for the report.
1676
+
1677
+ * Fix for detaching a package when two classes of the same name are
1678
+ present in method signatures for the same generic. Thanks to
1679
+ Gabor Csardi for the report.
1680
+
1681
+ * match.arg("", c("", "a", "B")) gives a better error message, in
1682
+ part from PR#17959, thanks to Elin Waring.
1683
+
1684
+ * R CMD Sweave --clean no longer removes pre-existing files or
1685
+ subdirectories (PR#18242).
1686
+
1687
+ * The quartz() device no longer splits polylines into subpaths.
1688
+ That has caused narrowly-spaced lines with many points to always
1689
+ look solid even when dashed line type was used due to dash phase
1690
+ restarts.
1691
+
1692
+ * Deparsing constructs such as quote(1 + `!`(2) + 3) works again as
1693
+ before R 3.5.0, thanks to the report and patch in PR#18284 by
1694
+ Suharto Anggono.
1695
+
1696
+ * as.list(f) for a factor f now keeps names(f), fixing PR#18309.
1697
+
1698
+ * qbeta(.001, .9, .009) and analogous qf() calls now return a
1699
+ correct value instead of NaN or wrongly 1, all with a warning;
1700
+ thanks to the report by Ludger Goeminne in PR#18302.
1701
+
1702
+ * plot.lm() failed to produce the plot of residuals vs. factor
1703
+ levels (i.e., which=5 when leverages are constant) for models
1704
+ with character predictors (PR#17840).
1705
+
1706
+ * interaction.plot(..., xtick = TRUE) misplaced the x-axis line
1707
+ (PR#18305).
1708
+
1709
+ * Not strictly fixing a bug, format()ing and print()ing of
1710
+ non-finite Date and POSIXt values NaN and +/-Inf no longer show
1711
+ as NA but the respective string, e.g., Inf, for consistency with
1712
+ numeric vector's behaviour, fulfilling the wish of PR#18308.
1713
+
1714
+ * R CMD check no longer runs test scripts generated from
1715
+ corresponding .Rin files twice and now signals an ERROR if
1716
+ processing an .Rin script fails.
1717
+
1718
+ * tools::Rd2txt() used for plain-text help pages now renders \hrefs
1719
+ (if tools::Rd2txt_options(showURLs = TRUE)) and \urls with
1720
+ percent-encoding and standards-compliant delimiting style (angle
1721
+ brackets and no URL: prefix). \email is now rendered with a
1722
+ mailto: prefix.
1723
+
1724
+ CHANGES IN R 4.1.3:
1725
+
1726
+ NEW FEATURES:
1727
+
1728
+ * The default version of Bioconductor has been changed to 3.14.
1729
+ (This is used by setRepositories and the menus in GUIs.)
1730
+
1731
+ UTILITIES:
1732
+
1733
+ * R CMD check --as-cran has a workaround for a bug in versions of
1734
+ file up to at least 5.41 which mis-identify DBF files last
1735
+ changed in 2022 as executables.
1736
+
1737
+ C-LEVEL FACILITIES:
1738
+
1739
+ * The legacy S-compatibility macros SINGLE_* in R_ext/Constants.h
1740
+ (included by R.h) are deprecated and will be removed in R 4.2.0.
1741
+
1742
+ BUG FIXES:
1743
+
1744
+ * Initialization of self-starting nls() models with initialization
1745
+ functions following the pre-R-4.1.0 API (without the ...
1746
+ argument) works again for now, with a deprecation warning.
1747
+
1748
+ * Fixed quoting of ~autodetect~ in Java setting defaults to avoid
1749
+ inadvertent user lookup due to leading ~, reported in PR#18231 by
1750
+ Harold Gutch.
1751
+
1752
+ * substr(., start, stop) <- v now treats _negative_ stop values
1753
+ correctly. Reported with a patch in PR#18228 by Brodie Gaslam.
1754
+
1755
+ * Subscripting an array x without dimnames by a
1756
+ length(dim(x))-column character matrix gave "random" non-sense,
1757
+ now an error; reported in PR#18244 by Mikael Jagan.
1758
+
1759
+ * ...names() now matches names(list(...)) closely, fixing PR#18247.
1760
+
1761
+ * all.equal(*, scale = s) now works as intended when length(s) > 1,
1762
+ partly thanks to Michael Chirico's PR#18272.
1763
+
1764
+ * print(x) for long vectors x now also works for named atomic
1765
+ vectors or lists and prints the correct number when reaching the
1766
+ getOption("max.print") limit; partly thanks to a report and
1767
+ proposal by Hugh Parsonage to the R-devel list.
1768
+
1769
+ * all.equal(<selfStart>, *) no longer signals a deprecation
1770
+ warning.
1771
+
1772
+ * reformulate(*, response=r) gives a helpful error message now when
1773
+ length(r) > 1, thanks to Bill Dunlap's PR#18281.
1774
+
1775
+ * Modifying globalCallingHandlers inside withCallingHandlers() now
1776
+ works or fails correctly, thanks to Henrik Bengtsson's PR#18257.
1777
+
1778
+ * hist(<Date>, breaks = "days") and hist(<POSIXt>, breaks = "secs")
1779
+ no longer fail for inputs of length 1.
1780
+
1781
+ * qbeta(.001, .9, .009) and similar cases now converge correctly
1782
+ thanks to Ben Bolker's report in PR#17746.
1783
+
1784
+ * window(x, start, end) no longer wrongly signals "'start' cannot
1785
+ be after 'end'", fixing PR#17527 and PR#18291.
1786
+
1787
+ * data() now checks that its (rarely used) list argument is a
1788
+ character vector - a couple of packages passed other types and
1789
+ gave incorrect results.
1790
+
1791
+ * which() now checks its arr.ind argument is TRUE rather coercing
1792
+ to logical and taking the first element - which gave incorrect
1793
+ results in package code.
1794
+
1795
+ * model.weights() and model.offset() more carefully extract their
1796
+ model components, thanks to Ben Bolker and Tim Taylor's R-devel
1797
+ post.
1798
+
1799
+ * list.files(recursive = TRUE) now shows all broken symlinks
1800
+ (previously, some of them may have been omitted, PR#18296).
1801
+
1802
+ CHANGES IN R 4.1.2:
1803
+
1804
+ C-LEVEL FACILITIES:
1805
+
1806
+ * The workaround in headers R.h and Rmath.h (using namespace std;)
1807
+ for the Oracle Developer Studio compiler is no longer needed now
1808
+ C++11 is required so has been removed. A couple more usages of
1809
+ log() (which should have been std::log()) with an int argument
1810
+ are reported on Solaris.
1811
+
1812
+ * The undocumented limit of 4095 bytes on messages from the
1813
+ S-compatibility macros PROBLEM and MESSAGE is now documented and
1814
+ longer messages will be silently truncated rather than
1815
+ potentially causing segfaults.
1816
+
1817
+ * If the R_NO_SEGV_HANDLER environment variable is non-empty, the
1818
+ signal handler for SEGV/ILL/BUS signals (which offers recovery
1819
+ user interface) is not set. This allows more reliable debugging
1820
+ of crashes that involve the console.
1821
+
1822
+ DEPRECATED AND DEFUNCT:
1823
+
1824
+ * The legacy S-compatibility macros PROBLEM, MESSAGE, ERROR, WARN,
1825
+ WARNING, RECOVER, ... are deprecated and will be hidden in R
1826
+ 4.2.0. R's native interface of Rf_error and Rf_warning has long
1827
+ been preferred.
1828
+
1829
+ BUG FIXES:
1830
+
1831
+ * .mapply(F, dots, .) no longer segfaults when dots is not a list
1832
+ and uses match.fun(F) as always documented; reported by Andrew
1833
+ Simmons in PR#18164.
1834
+
1835
+ * hist(<Date>, ...) and hist(<POSIXt>, ...) no longer pass
1836
+ arguments for rect() (such as col and density) to axis().
1837
+ (Thanks to Sebastian Meyer's PR#18171.)
1838
+
1839
+ * \Sexpr{ch} now preserves Encoding(ch). (Thanks to report and
1840
+ patch by Jeroen Ooms in PR#18152.)
1841
+
1842
+ * Setting the RNG to "Marsaglia-Multicarry" e.g., by RNGkind(), now
1843
+ warns in more places, thanks to Andr? Gillibert's report and
1844
+ patch in PR#18168.
1845
+
1846
+ * gray(numeric(), alpha=1/2) no longer segfaults, fixing PR#18183,
1847
+ reported by Till Krenz.
1848
+
1849
+ * Fixed dnbinom(x, size=<very_small>, .., log=TRUE) regression,
1850
+ reported by Martin Morgan.
1851
+
1852
+ * as.Date.POSIXlt(x) now keeps names(x), thanks to Davis Vaughan's
1853
+ report and patch in PR#18188.
1854
+
1855
+ * model.response() now strips an "AsIs" class typically, thanks to
1856
+ Duncan Murdoch's report and other discussants in PR#18190.
1857
+
1858
+ * try() is considerably faster in case of an error and long call,
1859
+ as e.g., from some do.call(). Thanks to Alexander Kaever's
1860
+ suggestion posted to R-devel.
1861
+
1862
+ * qqline(y = <object>) such as y=I(.), now works, see also
1863
+ PR#18190.
1864
+
1865
+ * Non-integer mgp par() settings are now handled correctly in
1866
+ axis() and mtext(), thanks to Mikael Jagan and Duncan Murdoch's
1867
+ report and suggestion in PR#18194.
1868
+
1869
+ * formatC(x) returns length zero character() now, rather than ""
1870
+ when x is of length zero, as documented, thanks to Davis
1871
+ Vaughan's post to R-devel.
1872
+
1873
+ * removeSource(fn) now retains (other) attributes(fn).
1874
+
1875
+ CHANGES IN R 4.1.1:
1876
+
1877
+ NEW FEATURES:
1878
+
1879
+ * require(pkg, quietly = TRUE) is quieter and in particular does
1880
+ not warn if the package is not found.
1881
+
1882
+ DEPRECATED AND DEFUNCT:
1883
+
1884
+ * Use of ftp:// URIs should be regarded as deprecated, with
1885
+ on-going support confined to method = "libcurl" and not routinely
1886
+ tested. (Nowadays no major browser supports them.)
1887
+
1888
+ * The non-default method = "internal" is deprecated for http:// and
1889
+ ftp:// URIs for both download.file and url.
1890
+
1891
+ * On Windows, method = "wininet" is deprecated for http://,
1892
+ https:// and ftp:// URIs for both download.file and url. (A
1893
+ warning is only given for ftp://.)
1894
+
1895
+ For ftp:// URIs the default method is now "libcurl" if available
1896
+ (which it is on CRAN builds).
1897
+
1898
+ method = "wininet" remains the default for http:// and https://
1899
+ URIs but if libcurl is available, using method = "libcurl" is
1900
+ preferred.
1901
+
1902
+ INSTALLATION:
1903
+
1904
+ * make check now works also without a LaTeX installation. (Thanks
1905
+ to Sebastian Meyer's PR#18103.)
1906
+
1907
+ BUG FIXES:
1908
+
1909
+ * make check-devel works again in an R build configured with
1910
+ --without-recommended-packages.
1911
+
1912
+ * qnbinom(p, size, mu) for large size/mu is correct now in a range
1913
+ of cases (PR#18095); similarly for the (size, prob)
1914
+ parametrization of the negative binomial. Also qpois() and
1915
+ qbinom() are better and or faster for extreme cases. The
1916
+ underlying C code has been modularized and is common to all four
1917
+ cases of discrete distributions.
1918
+
1919
+ * gap.axis is now part of the axis() arguments which are passed
1920
+ from bxp(), and hence boxplot(). (Thanks to Martin Smith's
1921
+ report and suggestions in PR#18109.)
1922
+
1923
+ * .First and .Last can again be set from the site profile.
1924
+
1925
+ * seq.int(from, to, *) and seq.default(..) now work better in large
1926
+ range cases where from-to is infinite where the two boundaries
1927
+ are finite.
1928
+
1929
+ * all.equal(x,y) now returns TRUE correctly also when several
1930
+ entries of abs(x) and abs(y) are close to .Machine$double.xmax,
1931
+ the largest finite numeric.
1932
+
1933
+ * model.frame() now clears the object bit when removing the class
1934
+ attribute of a value via na.action (PR#18100).
1935
+
1936
+ * charClass() now works with multi-character strings on Windows
1937
+ (PR#18104, fixed by Bill Dunlap).
1938
+
1939
+ * encodeString() on Solaris now works again in Latin-1 encoding on
1940
+ characters represented differently in UTF-8. Support for
1941
+ surrogate pairs on Solaris has been improved.
1942
+
1943
+ * file.show() on Windows now works with non-ASCII path names
1944
+ representable in the current native encoding (PR#18132).
1945
+
1946
+ * Embedded R on Windows can now find R home directory via the
1947
+ registry even when installed only for the current user
1948
+ (PR#18135).
1949
+
1950
+ * pretty(x) with finite x now returns finite values also in the
1951
+ case where the extreme x values are close in size to the maximal
1952
+ representable number .Machine$double.xmax.
1953
+
1954
+ Also, it's been tweaked for very small ranges and when a boundary
1955
+ is close (or equal) to zero; e.g., pretty(c(0,1e-317)) no longer
1956
+ has negative numbers, currently still warning about a very small
1957
+ range, and pretty(2^-(1024 - 2^-1/(c(24,10)))) is more accurate.
1958
+
1959
+ * The error message for not finding vignette files when weaving has
1960
+ correct file sizes now. (Thanks to Sebastian Meyer's PR#18154.)
1961
+
1962
+ * dnbinom(20, <large>, 1) now correctly gives 0, and similar cases
1963
+ are more accurate with underflow precaution. (Reported by
1964
+ Francisco Vera Alcivar in PR#18072.)
1965
+
1966
+ CHANGES IN R 4.1.0:
1967
+
1968
+ FUTURE DIRECTIONS:
1969
+
1970
+ * It is planned that the 4.1.x series will be the last to support
1971
+ 32-bit Windows, with production of binary packages for that
1972
+ series continuing until early 2023.
1973
+
1974
+ SIGNIFICANT USER-VISIBLE CHANGES:
1975
+
1976
+ * Data set esoph in package datasets now provides the correct
1977
+ numbers of controls; previously it had the numbers of cases added
1978
+ to these. (Reported by Alexander Fowler in PR#17964.)
1979
+
1980
+ NEW FEATURES:
1981
+
1982
+ * www.omegahat.net is no longer one of the repositories known by
1983
+ default to setRepositories(). (Nowadays it only provides source
1984
+ packages and is often unavailable.)
1985
+
1986
+ * Function package_dependencies() (in package tools) can now use
1987
+ different dependency types for direct and recursive dependencies.
1988
+
1989
+ * The checking of the size of tarball in R CMD check --as-cran
1990
+ <pkg> may be tweaked via the new environment variable
1991
+ _R_CHECK_CRAN_INCOMING_TARBALL_THRESHOLD_, as suggested in
1992
+ PR#17777 by Jan Gorecki.
1993
+
1994
+ * Using c() to combine a factor with other factors now gives a
1995
+ factor, an ordered factor when combining ordered factors with
1996
+ identical levels.
1997
+
1998
+ * apply() gains a simplify argument to allow disabling of
1999
+ simplification of results.
2000
+
2001
+ * The format() method for class "ftable" gets a new option justify.
2002
+ (Suggested by Thomas Soeiro.)
2003
+
2004
+ * New ...names() utility. (Proposed by Neal Fultz in PR#17705.)
2005
+
2006
+ * type.convert() now warns when its as.is argument is not
2007
+ specified, as the help file always said it _should_. In that
2008
+ case, the default is changed to TRUE in line with its change in
2009
+ read.table() (related to stringsAsFactors) in R 4.0.0.
2010
+
2011
+ * When printing list arrays, classed objects are now shown _via_
2012
+ their format() value if this is a short enough character string,
2013
+ or by giving the first elements of their class vector and their
2014
+ length.
2015
+
2016
+ * capabilities() gets new entry "Rprof" which is TRUE when R has
2017
+ been configured with the equivalent of --enable-R-profiling (as
2018
+ it is by default). (Related to Michael Orlitzky's report
2019
+ PR#17836.)
2020
+
2021
+ * str(xS4) now also shows extraneous attributes of an S4 object
2022
+ xS4.
2023
+
2024
+ * Rudimentary support for vi-style tags in rtags() and R CMD rtags
2025
+ has been added. (Based on a patch from Neal Fultz in PR#17214.)
2026
+
2027
+ * checkRdContents() is now exported from tools; it and also
2028
+ checkDocFiles() have a new option chkInternal allowing to check
2029
+ Rd files marked with keyword "internal" as well. The latter can
2030
+ be activated for R CMD check via environment variable
2031
+ _R_CHECK_RD_INTERNAL_TOO_.
2032
+
2033
+ * New functions numToBits() and numToInts() extend the raw
2034
+ conversion utilities to (double precision) numeric.
2035
+
2036
+ * Functions URLencode() and URLdecode() in package utils now work
2037
+ on vectors of URIs. (Based on patch from Bob Rudis submitted
2038
+ with PR#17873.)
2039
+
2040
+ * path.expand() can expand ~user on most Unix-alikes even when
2041
+ readline is not in use. It tries harder to expand ~, for example
2042
+ should environment variable HOME be unset.
2043
+
2044
+ * For HTML help (both dynamic and static), Rd file links to help
2045
+ pages in external packages are now treated as references to
2046
+ topics rather than file names, and fall back to a file link only
2047
+ if the topic is not found in the target package. The earlier rule
2048
+ which prioritized file names over topics can be restored by
2049
+ setting the environment variable _R_HELP_LINKS_TO_TOPICS_ to a
2050
+ false value.
2051
+
2052
+ * c() now removes NULL arguments before dispatching to methods,
2053
+ thus simplifying the implementation of c() methods, _but_ for
2054
+ back compatibility keeps NULL when it is the first argument.
2055
+ (From a report and patch proposal by Lionel Henry in PR#17900.)
2056
+
2057
+ * Vectorize()'s result function's environment no longer keeps
2058
+ unneeded objects.
2059
+
2060
+ * Function ...elt() now propagates visibility consistently with
2061
+ ..n. (Thanks to Lionel Henry's PR#17905.)
2062
+
2063
+ * capture.output() no longer uses non-standard evaluation to
2064
+ evaluate its arguments. This makes evaluation of functions like
2065
+ parent.frame() more consistent. (Thanks to Lionel Henry's
2066
+ PR#17907.)
2067
+
2068
+ * packBits(bits, type="double") now works as inverse of
2069
+ numToBits(). (Thanks to Bill Dunlap's proposal in PR#17914.)
2070
+
2071
+ * curlGetHeaders() has two new arguments, timeout to specify the
2072
+ timeout for that call (overriding getOption("timeout")) and TLS
2073
+ to specify the minimum TLS protocol version to be used for
2074
+ https:// URIs (_inter alia_ providing a means to check for sites
2075
+ using deprecated TLS versions 1.0 and 1.1).
2076
+
2077
+ * For nls(), an optional constant scaleOffset may be added to the
2078
+ denominator of the relative offset convergence test for cases
2079
+ where the fit of a model is expected to be exact, thanks to a
2080
+ proposal by John Nash. nls(*, trace=TRUE) now also shows the
2081
+ convergence criterion.
2082
+
2083
+ * Numeric differentiation _via_ numericDeriv() gets new optional
2084
+ arguments eps and central, the latter for taking central divided
2085
+ differences. The latter can be activated for nls() via
2086
+ nls.control(nDcentral = TRUE).
2087
+
2088
+ * nls() now passes the trace and control arguments to getInitial(),
2089
+ notably for all self-starting models, so these can also be fit in
2090
+ zero-noise situations via a scaleOffset. For this reason, the
2091
+ initial function of a selfStart model must now have ... in its
2092
+ argument list.
2093
+
2094
+ * bquote(splice = TRUE) can now splice expression vectors with
2095
+ attributes: this makes it possible to splice the result of
2096
+ parse(keep.source = TRUE). (Report and patch provided by Lionel
2097
+ Henry in PR#17869.)
2098
+
2099
+ * textConnection() gets an optional name argument.
2100
+
2101
+ * get(), exists(), and get0() now signal an error if the first
2102
+ argument has length greater than 1. Previously additional
2103
+ elements were silently ignored. (Suggested by Antoine Fabri on
2104
+ R-devel.)
2105
+
2106
+ * R now provides a shorthand notation for creating functions, e.g.
2107
+ \(x) x + 1 is parsed as function(x) x + 1.
2108
+
2109
+ * R now provides a simple native forward pipe syntax |>. The
2110
+ simple form of the forward pipe inserts the left-hand side as the
2111
+ first argument in the right-hand side call. The pipe
2112
+ implementation as a syntax transformation was motivated by
2113
+ suggestions from Jim Hester and Lionel Henry.
2114
+
2115
+ * all.equal(f, g) for functions now by default also compares their
2116
+ environment(.)s, notably via new all.equal method for class
2117
+ function. Comparison of nls() fits, e.g., may now need
2118
+ all.equal(m1, m2, check.environment = FALSE).
2119
+
2120
+ * .libPaths() gets a new option include.site, allowing to _not_
2121
+ include the site library. (Thanks to Dario Strbenac's suggestion
2122
+ and Gabe Becker's PR#18016.)
2123
+
2124
+ * Lithuanian translations are now available. (Thanks to Rimantas
2125
+ ?akauskas.)
2126
+
2127
+ * names() now works for DOTSXP objects. On the other hand, in
2128
+ R-lang, the R language manual, we now warn against relying on the
2129
+ structure or even existence of such dot-dot-dot objects.
2130
+
2131
+ * all.equal() no longer gives an error on DOTSXP objects.
2132
+
2133
+ * capabilities("cairo") now applies only to the file-based devices
2134
+ as it is now possible (if very unusual) to build R with Cairo
2135
+ support for those but not for X11().
2136
+
2137
+ * There is optional support for tracing the progress of
2138
+ loadNamespace() - see its help.
2139
+
2140
+ * (Not Windows.) l10n_info() reports an additional element, the
2141
+ name of the encoding as reported by the OS (which may differ from
2142
+ the encoding part (if any) of the result from
2143
+ Sys.getlocale("LC_CTYPE")).
2144
+
2145
+ * New function gregexec() which generalizes regexec() to find _all_
2146
+ disjoint matches and all substrings corresponding to
2147
+ parenthesized subexpressions of the given regular expression.
2148
+ (Contributed by Brodie Gaslam.)
2149
+
2150
+ * New function charClass() in package utils to query the
2151
+ wide-character classification functions in use (such as
2152
+ iswprint).
2153
+
2154
+ * The names of quantile()'s result no longer depend on the global
2155
+ getOption("digits"), but quantile() gets a new optional argument
2156
+ digits = 7 instead.
2157
+
2158
+ * grep(), sub(), regexp and variants work considerably faster for
2159
+ long factors with few levels. (Thanks to Michael Chirico's
2160
+ PR#18063.)
2161
+
2162
+ * Provide grouping of x11() graphics windows within a window
2163
+ manager such as Gnome or Unity; thanks to a patch by Ivan Krylov
2164
+ posted to R-devel.
2165
+
2166
+ * The split() method for class data.frame now allows the f argument
2167
+ to be specified as a formula.
2168
+
2169
+ * sprintf now warns on arguments unused by the format string.
2170
+
2171
+ * New palettes "Rocket" and "Mako" for hcl.colors() (approximating
2172
+ palettes of the same name from the viridisLite package).
2173
+
2174
+ Contributed by Achim Zeileis.
2175
+
2176
+ * The base environment and its namespace are now locked (so one can
2177
+ no longer add bindings to these or remove from these).
2178
+
2179
+ * Rterm handling of multi-byte characters has been improved,
2180
+ allowing use of such characters when supported by the current
2181
+ locale.
2182
+
2183
+ * Rterm now accepts ALT+ +xxxxxxxx sequences to enter Unicode
2184
+ characters as hex digits.
2185
+
2186
+ * Environment variable LC_ALL on Windows now takes precedence over
2187
+ LC_CTYPE and variables for other supported categories, matching
2188
+ the POSIX behaviour.
2189
+
2190
+ * duplicated() and anyDuplicated() are now optimized for integer
2191
+ and real vectors that are known to be sorted via the ALTREP
2192
+ framework. Contributed by Gabriel Becker via PR#17993.
2193
+
2194
+ GRAPHICS:
2195
+
2196
+ * The graphics engine version, R_GE_version, has been bumped to 14
2197
+ and so packages that provide graphics devices should be
2198
+ reinstalled.
2199
+
2200
+ * Graphics devices should now specify deviceVersion to indicate
2201
+ what version of the graphics engine they support.
2202
+
2203
+ * Graphics devices can now specify deviceClip. If TRUE, the
2204
+ graphics engine will never perform any clipping of output itself.
2205
+
2206
+ The clipping that the graphics engine does perform (for both
2207
+ canClip = TRUE and canClip = FALSE) has been improved to avoid
2208
+ producing unnecessary artifacts in clipped output.
2209
+
2210
+ * The grid package now allows gpar(fill) to be a linearGradient(),
2211
+ a radialGradient(), or a pattern(). The viewport(clip) can now
2212
+ also be a grob, which defines a clipping path, and there is a new
2213
+ viewport(mask) that can also be a grob, which defines a mask.
2214
+
2215
+ These new features are only supported so far on the Cairo-based
2216
+ graphics devices and on the pdf() device.
2217
+
2218
+ * (Not Windows.) A warning is given when a Cairo-based type is
2219
+ specified for a png(), jpeg(), tiff() or bmp() device but Cairo
2220
+ is unsupported (so type = "Xlib" is tried instead).
2221
+
2222
+ * grSoftVersion() now reports the versions of FreeType and
2223
+ FontConfig if they are used directly (not _via_ Pango), as is
2224
+ most commonly done on macOS.
2225
+
2226
+ C-LEVEL FACILITIES:
2227
+
2228
+ * The _standalone_ libRmath math library and R's C API now provide
2229
+ log1pexp() again as documented, and gain log1mexp().
2230
+
2231
+ INSTALLATION on a UNIX-ALIKE:
2232
+
2233
+ * configure checks for a program pkgconf if program pkg-config is
2234
+ not found. These are now only looked for on the path (like
2235
+ almost all other programs) so if needed specify a full path to
2236
+ the command in PKG_CONFIG, for example in file config.site.
2237
+
2238
+ * C99 function iswblank is required - it was last seen missing ca
2239
+ 2003 so the workaround has been removed.
2240
+
2241
+ * There are new configure options --with-internal-iswxxxxx,
2242
+ --with-internal-towlower and --with-internal-wcwidth which allows
2243
+ the system functions for wide-character classification,
2244
+ case-switching and width (wcwidth and wcswidth) to be replaced by
2245
+ internal ones. The first has long been used on macOS, AIX (and
2246
+ Windows) but this enables it to be unselected there and selected
2247
+ for other platforms (it is the new default on Solaris). The
2248
+ second is new in this version of R and is selected by default on
2249
+ macOS and Solaris. The third has long been the default and
2250
+ remains so as it contains customizations for East Asian
2251
+ languages.
2252
+
2253
+ System versions of these functions are often minimally
2254
+ implemented (sometimes only for ASCII characters) and may not
2255
+ cover the full range of Unicode points: for example Solaris (and
2256
+ Windows) only cover the Basic Multilingual Plane.
2257
+
2258
+ * Cairo installations without X11 are more likely to be detected by
2259
+ configure, when the file-based Cairo graphics devices will be
2260
+ available but not X11(type = "cairo").
2261
+
2262
+ * There is a new configure option --with-static-cairo which is the
2263
+ default on macOS. This should be used when only static cairo
2264
+ (and where relevant, Pango) libraries are available.
2265
+
2266
+ * Cairo-based graphics devices on platforms without Pango but with
2267
+ FreeType/FontConfig will make use of the latter for font
2268
+ selection.
2269
+
2270
+ LINK-TIME OPTIMIZATION on a UNIX-ALIKE:
2271
+
2272
+ * Configuring with flag --enable-lto=R now also uses LTO when
2273
+ installing the recommended packages.
2274
+
2275
+ * R CMD INSTALL and R CMD SHLIB have a new flag --use-LTO to use
2276
+ LTO when compiling code, for use with R configured with
2277
+ --enable-lto=R. For R configured with --enable-lto, they have
2278
+ the new flag --no-use-LTO.
2279
+
2280
+ Packages can opt in or out of LTO compilation _via_ a UseLTO
2281
+ field in the DESCRIPTION file. (As usual this can be overridden
2282
+ by the command-line flags.)
2283
+
2284
+ BUILDING R on Windows:
2285
+
2286
+ * for GCC >= 8, FC_LEN_T is defined in config.h and hence character
2287
+ lengths are passed from C to Fortran in _inter alia_ BLAS and
2288
+ LAPACK calls.
2289
+
2290
+ * There is a new text file src/gnuwin32/README.compilation, which
2291
+ outlines how C/Fortran code compilation is organized and
2292
+ documents new features:
2293
+
2294
+ * R can be built with Link-Time Optimization with a suitable
2295
+ compiler - doing so with GCC 9.2 showed several
2296
+ inconsistencies which have been corrected.
2297
+
2298
+ * There is support for cross-compiling the C and Fortran code
2299
+ in R and standard packages on suitable (Linux) platforms.
2300
+ This is mainly intended to allow developers to test later
2301
+ versions of compilers - for example using GCC 9.2 or 10.x has
2302
+ detected issues that GCC 8.3 in Rtools40 does not.
2303
+
2304
+ * There is experimental support for cross-building R packages
2305
+ with C, C++ and/or Fortran code.
2306
+
2307
+ * The R installer can now be optionally built to support a single
2308
+ architecture (only 64-bit or only 32-bit).
2309
+
2310
+ PACKAGE INSTALLATION:
2311
+
2312
+ * The default C++ standard has been changed to C++14 where
2313
+ available (which it is on all currently checked platforms): if
2314
+ not (as before) C++11 is used if available otherwise C++ is not
2315
+ supported.
2316
+
2317
+ Packages which specify C++11 will still be installed using C++11.
2318
+
2319
+ C++14 compilers may give deprecation warnings, most often for
2320
+ std::random_shuffle (deprecated in C++14 and removed in C++17).
2321
+ Either specify C++11 (see 'Writing R Extensions') or modernize
2322
+ the code and if needed specify C++14. The latter has been
2323
+ supported since R 3.4.0 so the package's DESCRIPTION would need
2324
+ to include something like
2325
+
2326
+ Depends: R (>= 3.4)
2327
+
2328
+ PACKAGE INSTALLATION on Windows:
2329
+
2330
+ * R CMD INSTALL and R CMD SHLIB make use of their flag --use-LTO
2331
+ when the LTO_OPT make macro is set in file etc/${R_ARCH}/Makeconf
2332
+ or in a personal/site Makevars file. (For details see 'Writing R
2333
+ Extensions' ?4.5.)
2334
+
2335
+ This provides a valuable check on code consistency. It does work
2336
+ with GCC 8.3 as in Rtools40, but that does not detect everything
2337
+ the CRAN checks with current GCC do.
2338
+
2339
+ PACKAGE INSTALLATION on macOS:
2340
+
2341
+ * The default personal library directory on builds with
2342
+ --enable-aqua (including CRAN builds) now differs by CPU type,
2343
+ one of
2344
+
2345
+ ~/Library/R/x86_64/x.y/library
2346
+ ~/Library/R/arm64/x.y/library
2347
+
2348
+ This uses the CPU type R (and hence the packages) were built for,
2349
+ so when a x86_64 build of R is run under Rosetta emulation on an
2350
+ arm64 Mac, the first is used.
2351
+
2352
+ UTILITIES:
2353
+
2354
+ * R CMD check can now scan package functions for bogus return
2355
+ statements, which were possibly intended as return() calls (wish
2356
+ of PR#17180, patch by Sebastian Meyer). This check can be
2357
+ activated via the new environment variable
2358
+ _R_CHECK_BOGUS_RETURN_, true for --as-cran.
2359
+
2360
+ * R CMD build omits tarballs and binaries of previous builds from
2361
+ the top-level package directory. (PR#17828, patch by Sebastian
2362
+ Meyer.)
2363
+
2364
+ * R CMD check now runs sanity checks on the use of LazyData, for
2365
+ example that a data directory is present and that
2366
+ LazyDataCompression is not specified without LazyData and has a
2367
+ documented value. For packages with large LazyData databases
2368
+ without specifying LazyDataCompression, there is a reference to
2369
+ the code given in 'Writing R Extensions' ?1.1.6 to test the
2370
+ choice of compression (as in all the CRAN packages tested a
2371
+ non-default method was preferred).
2372
+
2373
+ * R CMD build removes LazyData and LazyDataCompression fields from
2374
+ the DESCRIPTION file of packages without a data directory.
2375
+
2376
+ ENCODING-RELATED CHANGES:
2377
+
2378
+ * The parser now treats \Unnnnnnnn escapes larger than the upper
2379
+ limit for Unicode points (\U10FFFF) as an error as they cannot be
2380
+ represented by valid UTF-8.
2381
+
2382
+ Where such escapes are used for outputting non-printable
2383
+ (including unassigned) characters, 6 hex digits are used (rather
2384
+ than 8 with leading zeros). For clarity, braces are used, for
2385
+ example \U{0effff}.
2386
+
2387
+ * The parser now looks for non-ASCII spaces on Solaris (as
2388
+ previously on most other OSes).
2389
+
2390
+ * There are warnings (including from the parser) on the use of
2391
+ unpaired surrogate Unicode points such as \uD834. (These cannot
2392
+ be converted to valid UTF-8.)
2393
+
2394
+ * Functions nchar(), tolower(), toupper() and chartr() and those
2395
+ using regular expressions have more support for inputs with a
2396
+ marked Latin-1 encoding.
2397
+
2398
+ * The character-classification functions used (by default) to
2399
+ replace the system iswxxxxx functions on Windows, macOS and AIX
2400
+ have been updated to Unicode 13.0.0.
2401
+
2402
+ The character-width tables have been updated to include new
2403
+ assignments in Unicode 13.0.0. This included treating all
2404
+ control characters as having zero width.
2405
+
2406
+ * The code for evaluating default (extended) regular expressions
2407
+ now uses the same character-classification functions as the rest
2408
+ of R (previously they differed on Windows, macOS and AIX).
2409
+
2410
+ * There is a build-time option to replace the system's
2411
+ wide-character wctrans C function by tables shipped with R: use
2412
+ configure option --with-internal-towlower or (on Windows)
2413
+ -DUSE_RI18N_CASE in CFLAGS when building R. This may be needed
2414
+ to allow tolower() and toupper() to work with Unicode characters
2415
+ beyond the Basic Multilingual Plane where not supported by system
2416
+ functions (e.g. on Solaris where it is the new default).
2417
+
2418
+ * R is more careful when truncating UTF-8 and other multi-byte
2419
+ strings that are too long to be printed, passed to the system or
2420
+ libraries or placed into an internal buffer. Truncation will no
2421
+ longer produce incomplete multibyte characters.
2422
+
2423
+ DEPRECATED AND DEFUNCT:
2424
+
2425
+ * Function plclust() from the package stats and
2426
+ package.dependencies(), pkgDepends(), getDepList(),
2427
+ installFoundDepends(), and vignetteDepends() from package tools
2428
+ are defunct.
2429
+
2430
+ * Defunct functions checkNEWS() and readNEWS() from package tools
2431
+ and CRAN.packages() from utils have been removed.
2432
+
2433
+ * R CMD config CXXCPP is defunct (it was deprecated in R 3.6.2).
2434
+
2435
+ * parallel::detectCores() drops support for Irix (retired in 2013).
2436
+
2437
+ * The LINPACK argument to chol.default(), chol2inv(),
2438
+ solve.default() and svd() has been defunct since R 3.1.0. It was
2439
+ silently ignored up to R 4.0.3 but now gives an error.
2440
+
2441
+ * Subsetting/indexing, such as ddd[*] or ddd$x on a DOTSXP
2442
+ (dot-dot-dot) object ddd has been disabled; it worked by accident
2443
+ only and was undocumented.
2444
+
2445
+ BUG FIXES:
2446
+
2447
+ * Many more C-level allocations (mainly by malloc and strdup) are
2448
+ checked for success with suitable alternative actions.
2449
+
2450
+ * Bug fix for replayPlot(); this was turning off graphics engine
2451
+ display list recording if a recorded plot was replayed in the
2452
+ same session. The impact of the bug became visible if resize the
2453
+ device after replay OR if attempted another savePlot() after
2454
+ replay (empty display list means empty screen on resize or empty
2455
+ saved plot).
2456
+
2457
+ * R CMD check etc now warn when a package exports non-existing S4
2458
+ classes or methods, also in case of no "methods" presence.
2459
+ (Reported by Alex Bertram; reproducible example and patch by
2460
+ Sebastian Meyer in PR#16662.)
2461
+
2462
+ * boxplot() now also accepts calls for labels such as ylab, the
2463
+ same as plot(). (Reported by Marius Hofert.)
2464
+
2465
+ * The help page for xtabs() now correctly states that addNA is
2466
+ setting na.action = na.pass among others. (Reported as PR#17770
2467
+ by Thomas Soeiro.)
2468
+
2469
+ * The R CMD check <pkg> gives a longer and more comprehensible
2470
+ message when DESCRIPTION misses dependencies, e.g., in Imports:.
2471
+ (Thanks to the contributors of PR#17179.)
2472
+
2473
+ * update.default() now calls the generic update() on the formula to
2474
+ work correctly for models with extended formulas. (As reported
2475
+ and suggested by Neal Fultz in PR#17865.)
2476
+
2477
+ * The horizontal position of leaves in a dendrogram is now correct
2478
+ also with center = FALSE. (PR#14938, patch from Sebastian
2479
+ Meyer.)
2480
+
2481
+ * all.equal.POSIXt() no longer warns about and subsequently ignores
2482
+ inconsistent "tzone" attributes, but describes the difference in
2483
+ its return value (PR#17277). This check can be disabled _via_
2484
+ the new argument check.tzone = FALSE as suggested by Sebastian
2485
+ Meyer.
2486
+
2487
+ * as.POSIXct() now populates the "tzone" attribute from its tz
2488
+ argument when x is a logical vector consisting entirely of NA
2489
+ values.
2490
+
2491
+ * x[[2^31]] <- v now works. (Thanks to the report and patch by
2492
+ Suharto Anggono in PR#17330.)
2493
+
2494
+ * In log-scale graphics, axis() ticks and label positions are now
2495
+ computed more carefully and symmetrically in their range,
2496
+ typically providing _more_ ticks, fulfilling wishes in PR#17936.
2497
+ The change really corresponds to an improved axisTicks() (package
2498
+ grDevices), potentially influencing grid and lattice, for
2499
+ example.
2500
+
2501
+ * qnorm(<very large negative>, log.p=TRUE) is now correct to at
2502
+ least five digits where it was catastrophically wrong,
2503
+ previously.
2504
+
2505
+ * sum(df) and similar "Summary"- and "Math"-group member functions
2506
+ now work for data frames df with logical columns, notably also of
2507
+ zero rows. (Reported to R-devel by Martin "b706".)
2508
+
2509
+ * unsplit() had trouble with tibbles due to unsound use of rep(NA,
2510
+ len)-indexing, which should use NA_integer_ (Reported to R-devel
2511
+ by Mario Annau.)
2512
+
2513
+ * pnorm(x, log.p = TRUE) underflows to -Inf slightly later.
2514
+
2515
+ * show(<hidden S4 generic>) prints better and without quotes for
2516
+ non-hidden S4 generics.
2517
+
2518
+ * read.table() and relatives treated an "NA" column name as missing
2519
+ when check.names = FALSE PR#18007.
2520
+
2521
+ * Parsing strings containing UTF-16 surrogate pairs such as
2522
+ "\uD834\uDD1E" works better on some (uncommon) platforms.
2523
+ sprintf("%X", utf8ToInt("\uD834\uDD1E")) should now give "1D11E"
2524
+ on all platforms.
2525
+
2526
+ * identical(x,y) is no longer true for differing DOTSXP objects,
2527
+ fixing PR#18032.
2528
+
2529
+ * str() now works correctly for DOTSXP and related exotics, even
2530
+ when these are doomed.
2531
+
2532
+ Additionally, it no longer fails for lists with a class and
2533
+ "irregular" method definitions such that e.g. lapply(*) will
2534
+ necessarily fail, as currently for different igraph objects.
2535
+
2536
+ * Message translation domains, e.g., for errors and warnings, are
2537
+ now correctly determined also when e.g., a base function is
2538
+ called from "top-level" function (i.e., defined in globalenv()),
2539
+ thanks to a patch from Joris Goosen fixing PR#17998.
2540
+
2541
+ * Too long lines in environment files (e.g., Renviron) no longer
2542
+ crash R. This limit has been increased to 100,000 bytes.
2543
+ (PR#18001.)
2544
+
2545
+ * There is a further workaround for FreeType giving incorrect
2546
+ italic font faces with cairo-based graphics devices on macOS.
2547
+
2548
+ * add_datalist(*, force = TRUE) (from package tools) now actually
2549
+ updates an existing data/datalist file for new content. (Thanks
2550
+ to a report and patch by Sebastian Meyer in PR#18048.)
2551
+
2552
+ * cut.Date() and cut.POSIXt() could produce an empty last interval
2553
+ for breaks = "months" or breaks = "years". (Reported as PR#18053
2554
+ by Christopher Carbone.)
2555
+
2556
+ * Detection of the encoding of 'regular' macOS locales such as
2557
+ en_US (which is UTF-8) had been broken by a macOS change:
2558
+ fortunately these are now rarely used with en_US.UTF-8 being
2559
+ preferred.
2560
+
2561
+ * sub() and gsub(pattern, repl, x, *) now keep attributes of x such
2562
+ as names() also when pattern is NA (PR#18079).
2563
+
2564
+ * Time differences ("difftime" objects) get a replacement and a
2565
+ rep() method to keep "units" consistent. (Thanks to a report and
2566
+ patch by Nicolas Bennett in PR#18066.)
2567
+
2568
+ * The \RdOpts macro, setting defaults for \Sexpr options in an Rd
2569
+ file, had been ineffective since R 2.12.0: it now works again.
2570
+ (Thanks to a report and patch by Sebastian Meyer in PR#18073.)
2571
+
2572
+ * mclapply and pvec no longer accidentally terminate parallel
2573
+ processes started before by mcparallel or related calls in
2574
+ package parallel (PR#18078).
2575
+
2576
+ * grep and other functions for evaluating (extended) regular
2577
+ expressions handle in Unicode also strings not explicitly flagged
2578
+ UTF-8, but flagged native when running in UTF-8 locale.
2579
+
2580
+ * Fixed a crash in fifo implementation on Windows (PR#18031).
2581
+
2582
+ * Binary mode in fifo on Windows is now properly detected from
2583
+ argument open (PR#15600, PR#18031).
2584
+
2585
+ CHANGES IN R 4.0.5:
2586
+
2587
+ BUG FIXES:
2588
+
2589
+ * The change to the internal table in R 4.0.4 for iswprint has been
2590
+ reverted: it contained some errors in printability of 'East
2591
+ Asian' characters.
2592
+
2593
+ * For packages using LazyData, R CMD build ignored the
2594
+ --resave-data option and the BuildResaveData field of the
2595
+ DESCRIPTION file (in R versions 4.0.0 to 4.0.4).
2596
+
2597
+ CHANGES IN R 4.0.4:
2598
+
2599
+ NEW FEATURES:
2600
+
2601
+ * File share/texmf/tex/latex/jss.cls has been updated to work with
2602
+ LaTeX versions since Oct 2020.
2603
+
2604
+ * Unicode character width tables (as used by nchar(, type = "w"))
2605
+ have been updated to Unicode 12.1 by Brodie Gaslam (PR#17781),
2606
+ including many emoji.
2607
+
2608
+ * The internal table for iswprint (used on Windows, macOS and AIX)
2609
+ has been updated to include many recent Unicode characters.
2610
+
2611
+ INSTALLATION on a UNIX-ALIKE:
2612
+
2613
+ * If an external BLAS is specified by --with-blas=foo or _via_
2614
+ environment variable BLAS_LIBS is not found, this is now a
2615
+ configuration error. The previous behaviour was not clear from
2616
+ the documentation: it was to continue the search as if
2617
+ --with-blas=yes was specified.
2618
+
2619
+ BUG FIXES:
2620
+
2621
+ * all.equal(x,y) now "sees" the two different NAs in factors,
2622
+ thanks to Bill Dunlap and others in PR#17897.
2623
+
2624
+ * (~ NULL)[1] and similar formula subsetting now works, thanks to a
2625
+ report and patch by Henrik Bengtsson in PR#17935. Additionally,
2626
+ subsetting leaving an empty formula now works too, thanks to
2627
+ suggestions by Suharto Anggono.
2628
+
2629
+ * .traceback(n) keeps source references again, as before R 4.0.0,
2630
+ fixing a regression; introduced by the PR#17580, reported
2631
+ including two patch proposals by Brodie Gaslam.
2632
+
2633
+ * unlist(plst, recursive=FALSE) no longer drops content for
2634
+ pairlists with list components, thanks to the report and patch by
2635
+ Suharto Anggono in PR#17950.
2636
+
2637
+ * iconvlist() now also works on MUSL based (Linux) systems, from a
2638
+ report and patch suggestion by Wesley Chan in PR#17970.
2639
+
2640
+ * round() and signif() no longer tolerate wrong argument names,
2641
+ notably in 1-argument calls; reported by Shane Mueller on R-devel
2642
+ (mailing list); later reported as PR#17976.
2643
+
2644
+ * .Machine has longdouble.* elements only if
2645
+ capabilities("long.double") is true, as documented. (Previously
2646
+ they were included if the platform had long double identical to
2647
+ double, as ARM does.)
2648
+
2649
+ * p.adjust(numeric(), n=0) now works, fixing PR#18002.
2650
+
2651
+ * identical(x,y) no longer prints "Unknown Type .." for typeof(x)
2652
+ == "..." objects.
2653
+
2654
+ * Fix (auto-)print()ing of named complex vectors, see PR#17868 and
2655
+ PR#18019.
2656
+
2657
+ * all.equal(<language>, <...>) now works, fixing PR#18029.
2658
+
2659
+ * as.data.frame.list(L, row.names=NULL) now behaves in line with
2660
+ data.frame(), disregarding names of components of L, fixing
2661
+ PR#18034, reported by Kevin Tappe.
2662
+
2663
+ * checkRdaFiles(ff)$version is now correct also when ff contains
2664
+ files of different versions, thanks to a report and patch from
2665
+ Sebastian Meyer in PR#18041.
2666
+
2667
+ * macOS: Quartz device live drawing could fail (no plot is shown)
2668
+ if the system changes the drawing context after view update
2669
+ (often the case since macOS Big Sur). System log may show
2670
+ "CGContextDelegateCreateForContext: invalid context" error.
2671
+
2672
+ CHANGES IN R 4.0.3:
2673
+
2674
+ NEW FEATURES:
2675
+
2676
+ * On platforms using configure option --with-internal-tzcode,
2677
+ additional values "internal" and (on macOS only) "macOS" are
2678
+ accepted for the environment variable TZDIR. (See ?TZDIR.)
2679
+
2680
+ On macOS, "macOS" is used by default if the system timezone
2681
+ database is a newer version than that in the R installation.
2682
+
2683
+ * When install.packages(type = "source") fails to find a package in
2684
+ a repository it mentions package versions which are excluded by
2685
+ their R version requirement and links to hints on why a package
2686
+ might not be found.
2687
+
2688
+ * The default value for options("timeout") can be set from
2689
+ environment variable R_DEFAULT_INTERNET_TIMEOUT, still defaulting
2690
+ to 60 (seconds) if that is not set or invalid.
2691
+
2692
+ This may be needed when child R processes are doing downloads,
2693
+ for example during the installation of source packages which
2694
+ download jars or other forms of data.
2695
+
2696
+ LINK-TIME OPTIMIZATION on a UNIX-ALIKE:
2697
+
2698
+ * There is now support for parallelized Link-Time Optimization
2699
+ (LTO) with GCC and for 'thin' LTO with clang _via_ setting the
2700
+ LTO macro.
2701
+
2702
+ * There is support for setting a different LTO flag for the Fortran
2703
+ compiler, including to empty when mixing clang and gfortran (as
2704
+ on macOS). See file config.site.
2705
+
2706
+ * There is a new LTO_LD macro to set linker options for LTO
2707
+ compilation, for example to select an alternative linker or to
2708
+ parallelize thin LTO.
2709
+
2710
+ DEPRECATED AND DEFUNCT:
2711
+
2712
+ * The LINPACK argument to chol.default(), chol2inv(),
2713
+ solve.default() and svd() has been defunct since R 3.1.0. Using
2714
+ it now gives a warning which will become an error in R 4.1.0.
2715
+
2716
+ BUG FIXES:
2717
+
2718
+ * The code mitigating stack overflow with PCRE regexps on very long
2719
+ strings is enabled for PCRE2 < 10.30 also when JIT is enabled,
2720
+ since stack overflows have been seen in that case.
2721
+
2722
+ * Fix to correctly show the group labels in dotchart() (which where
2723
+ lost in the ylab improvement for R 4.0.0).
2724
+
2725
+ * addmargins(*, ..) now also works when fn() is a local function,
2726
+ thanks to bug report and patch PR#17124 from Alex Bertram.
2727
+
2728
+ * rank(x) and hence sort(x) now work when x is an object (as per
2729
+ is.object(x)) of type "raw" _and_ provides a valid `[` method,
2730
+ e.g., for gmp::as.bigz(.) numbers.
2731
+
2732
+ * chisq.test(*, simulate.p.value=TRUE) and r2dtable() now work
2733
+ correctly for large table entries (in the millions). Reported by
2734
+ Sebastian Meyer and investigated by more helpers in PR#16184.
2735
+
2736
+ * Low-level socket read/write operations have been fixed to
2737
+ correctly signal communication errors. Previously, such errors
2738
+ could lead to a segfault due to invalid memory access. Reported
2739
+ and debugged by Dmitriy Selivanov in PR#17850.
2740
+
2741
+ * quantile(x, pr) works more consistently for pr values slightly
2742
+ outside [0,1], thanks to Suharto Anggono's PR#17891.
2743
+
2744
+ Further, quantile(x, prN, names=FALSE) now works even when prN
2745
+ contains NAs, thanks to Anggono's PR#17892. Ditto for ordered
2746
+ factors or Date objects when type = 1 or 3, thanks to PR#17899.
2747
+
2748
+ * Libcurl-based internet access, including curlGetHeaders(), was
2749
+ not respecting the "timeout" option. If this causes
2750
+ unanticipated timeouts, consider increasing the default by
2751
+ setting R_DEFAULT_INTERNET_TIMEOUT.
2752
+
2753
+ * as.Date(<char>) now also works with an initial "", thanks to
2754
+ Michael Chirico's PR#17909.
2755
+
2756
+ * isS3stdGeneric(f) now detects an S3 generic also when it is
2757
+ trace()d, thanks to Gabe Becker's PR#17917.
2758
+
2759
+ * R_allocLD() has been fixed to return memory aligned for long
2760
+ double type PR#16534.
2761
+
2762
+ * fisher.test() no longer segfaults when called again after its
2763
+ internal stack has been exceeded PR#17904.
2764
+
2765
+ * Accessing a long vector represented by a compact integer sequence
2766
+ no longer segfaults (reported and debugged by Hugh Parsonage).
2767
+
2768
+ * duplicated() now works also for strings with multiple encodings
2769
+ inside a single vector PR#17809.
2770
+
2771
+ * phyper(11, 15, 0, 12, log.p=TRUE) no longer gives NaN; reported
2772
+ as PR#17271 by Alexey Stukalov.
2773
+
2774
+ * Fix incorrect calculation in logLik.nls() PR#16100, patch from
2775
+ Sebastian Meyer.
2776
+
2777
+ * A very old bug could cause a segfault in model.matrix() when
2778
+ terms involved logical variables. Part of PR#17879.
2779
+
2780
+ * model.frame.default() allowed data = 1, leading to involuntary
2781
+ variable capture (rest of PR#17879).
2782
+
2783
+ * tar() no longer skips non-directory files, thanks to a patch by
2784
+ Sebastian Meyer, fixing the remaining part of PR#16716.
2785
+
2786
+ CHANGES IN R 4.0.2:
2787
+
2788
+ UTILITIES:
2789
+
2790
+ * R CMD check skips vignette re-building (with a warning) if the
2791
+ VignetteBuilder package(s) are not available.
2792
+
2793
+ BUG FIXES:
2794
+
2795
+ * Paths with non-ASCII characters caused problems for package
2796
+ loading on Windows PR#17833.
2797
+
2798
+ * Using tcltk widgets no longer crashes R on Windows.
2799
+
2800
+ * source(*, echo=TRUE) no longer fails in some cases with empty
2801
+ lines; reported by Bill Dunlap in PR#17769.
2802
+
2803
+ * on.exit() now correctly matches named arguments, thanks to
2804
+ PR#17815 (including patch) by Brodie Gaslam.
2805
+
2806
+ * regexpr(*, perl=TRUE) no longer returns incorrect positions into
2807
+ text containing characters outside of the Unicode Basic
2808
+ Multilingual Plane on Windows.
2809
+
2810
+ CHANGES IN R 4.0.1:
2811
+
2812
+ NEW FEATURES:
2813
+
2814
+ * paste() and paste0() gain a new optional argument recycle0. When
2815
+ set to true, zero-length arguments are recycled leading to
2816
+ character(0) after the sep-concatenation, i.e., to the empty
2817
+ string "" if collapse is a string and to the zero-length value
2818
+ character(0) when collapse = NULL.
2819
+
2820
+ A package whose code uses this should depend on R (>= 4.0.1).
2821
+
2822
+ * The summary(<warnings>) method now maps the counts correctly to
2823
+ the warning messages.
2824
+
2825
+ BUG FIXES:
2826
+
2827
+ * aov(frml, ...) now also works where the formula deparses to more
2828
+ than 500 characters, thanks to a report and patch proposal by Jan
2829
+ Hauffa.
2830
+
2831
+ * Fix a dozen places (code, examples) as Sys.setlocale() returns
2832
+ the new rather than the previous setting.
2833
+
2834
+ * Fix for adding two complex grid units via sum(). Thanks to Gu
2835
+ Zuguang for the report and Thomas Lin Pedersen for the patch.
2836
+
2837
+ * Fix parallel::mclapply(..., mc.preschedule=FALSE) to handle raw
2838
+ vector results correctly. PR#17779
2839
+
2840
+ * Computing the base value, i.e., 2, "everywhere", now uses
2841
+ FLT_RADIX, as the original machar code looped indefinitely on the
2842
+ ppc64 architecture for the longdouble case.
2843
+
2844
+ * In R 4.0.0, sort.list(x) when is.object(x) was true, e.g., for x
2845
+ <- I(letters), was accidentally using method = "radix".
2846
+ Consequently, e.g., merge(<data.frame>) was much slower than
2847
+ previously; reported in PR#17794.
2848
+
2849
+ * plot(y ~ x, ylab = quote(y[i])) now works, as e.g., for xlab;
2850
+ related to PR#10525.
2851
+
2852
+ * parallel::detect.cores(all.tests = TRUE) tries a matching OS name
2853
+ before the other tests (which were intended only for unknown
2854
+ OSes).
2855
+
2856
+ * Parse data for raw strings is now recorded correctly. Reported by
2857
+ Gabor Csardi.
2858
+
2859
+ CHANGES IN R 4.0.0:
2860
+
2861
+ SIGNIFICANT USER-VISIBLE CHANGES:
2862
+
2863
+ * Packages need to be (re-)installed under this version (4.0.0) of
2864
+ R.
2865
+
2866
+ * matrix objects now also inherit from class "array", so e.g.,
2867
+ class(diag(1)) is c("matrix", "array"). This invalidates code
2868
+ incorrectly assuming that class(matrix_obj)) has length one.
2869
+
2870
+ S3 methods for class "array" are now dispatched for matrix
2871
+ objects.
2872
+
2873
+ * There is a new syntax for specifying _raw_ character constants
2874
+ similar to the one used in C++: r"(...)" with ... any character
2875
+ sequence not containing the sequence )". This makes it easier to
2876
+ write strings that contain backslashes or both single and double
2877
+ quotes. For more details see ?Quotes.
2878
+
2879
+ * R now uses a stringsAsFactors = FALSE default, and hence by
2880
+ default no longer converts strings to factors in calls to
2881
+ data.frame() and read.table().
2882
+
2883
+ A large number of packages relied on the previous behaviour and
2884
+ so have needed/will need updating.
2885
+
2886
+ * The plot() S3 generic function is now in package base rather than
2887
+ package graphics, as it is reasonable to have methods that do not
2888
+ use the graphics package. The generic is currently re-exported
2889
+ from the graphics namespace to allow packages importing it from
2890
+ there to continue working, but this may change in future.
2891
+
2892
+ Packages which define S4 generics for plot() should be
2893
+ re-installed and package code using such generics from other
2894
+ packages needs to ensure that they are imported rather than rely
2895
+ on their being looked for on the search path (as in a namespace,
2896
+ the base namespace has precedence over the search path).
2897
+
2898
+ REFERENCE COUNTING:
2899
+
2900
+ * Reference counting is now used instead of the NAMED mechanism for
2901
+ determining when objects can be safely mutated in base C code.
2902
+ This reduces the need for copying in some cases and should allow
2903
+ further optimizations in the future. It should help make the
2904
+ internal code easier to maintain.
2905
+
2906
+ This change is expected to have almost no impact on packages
2907
+ using supported coding practices in their C/C++ code.
2908
+
2909
+ MIGRATION TO PCRE2:
2910
+
2911
+ * This version of R is built against the PCRE2 library for
2912
+ Perl-like regular expressions, if available. (On non-Windows
2913
+ platforms PCRE1 can optionally be used if PCRE2 is not available
2914
+ at build time.) The version of PCRE in use can be obtained _via_
2915
+ extSoftVersion(): PCRE1 (formerly known as 'PCRE') has versions
2916
+ <= 8, PCRE2 versions >= 10.
2917
+
2918
+ * Making PCRE2 available when building R from source is strongly
2919
+ recommended (preferably version 10.30 or later) as PCRE1 is no
2920
+ longer developed: version 8.44 is 'likely to be the final
2921
+ release'.
2922
+
2923
+ * PCRE2 reports errors for some regular expressions that were
2924
+ accepted by PCRE1. A hyphen now has to be escaped in a character
2925
+ class to be interpreted as a literal (unless first or last in the
2926
+ class definition). \R, \B and \X are no longer allowed in
2927
+ character classes (PCRE1 treated these as literals).
2928
+
2929
+ * Option PCRE_study is no longer used with PCRE2, and is reported
2930
+ as FALSE when that is in use.
2931
+
2932
+ NEW FEATURES:
2933
+
2934
+ * assertError() and assertWarning() (in package tools) can now
2935
+ check for _specific_ error or warning classes _via_ the new
2936
+ optional second argument classes (which is not back compatible
2937
+ with previous use of an unnamed second argument).
2938
+
2939
+ * DF2formula(), the utility for the data frame method of formula(),
2940
+ now works without parsing and explicit evaluation, starting from
2941
+ Suharto Anggono's suggestion in PR#17555.
2942
+
2943
+ * approxfun() and approx() gain a new argument na.rm defaulting to
2944
+ true. If set to false, missing y values now propagate into the
2945
+ interpolated values.
2946
+
2947
+ * Long vectors are now supported as the seq argument of a for()
2948
+ loop.
2949
+
2950
+ * str(x) gets a new deparse.lines option with a default to speed it
2951
+ up when x is a large call object.
2952
+
2953
+ * The internal traceback object produced when an error is signalled
2954
+ (.Traceback), now contains the calls rather than the _deparse()d_
2955
+ calls, deferring the deparsing to the user-level functions
2956
+ .traceback() and traceback(). This fulfils the wish of PR#17580,
2957
+ reported including two patch proposals by Brodie Gaslam.
2958
+
2959
+ * data.matrix() now converts character columns to factors and from
2960
+ this to integers.
2961
+
2962
+ * package.skeleton() now explicitly lists all exports in the
2963
+ NAMESPACE file.
2964
+
2965
+ * New function .S3method() to register S3 methods in R scripts.
2966
+
2967
+ * file.path() has some support for file paths not in the session
2968
+ encoding, e.g. with UTF-8 inputs in a non-UTF-8 locale the output
2969
+ is marked as UTF-8.
2970
+
2971
+ * Most functions with file-path inputs will give an explicit error
2972
+ if a file-path input in a marked encoding cannot be translated
2973
+ (to the native encoding or in some cases on Windows to UTF-8),
2974
+ rather than translate to a different file path using escapes.
2975
+ Some (such as dir.exists(), file.exists(), file.access(),
2976
+ file.info(), list.files(), normalizePath() and path.expand())
2977
+ treat this like any other non-existent file, often with a
2978
+ warning.
2979
+
2980
+ * There is a new help document accessed by help("file path
2981
+ encoding") detailing how file paths with marked encodings are
2982
+ handled.
2983
+
2984
+ * New function list2DF() for creating data frames from lists of
2985
+ variables.
2986
+
2987
+ * iconv() has a new option sub = "Unicode" to translate UTF-8 input
2988
+ invalid in the to encoding using <U+xxxx> escapes.
2989
+
2990
+ * There is a new function infoRDS() providing information about the
2991
+ serialization format of a serialized object.
2992
+
2993
+ * S3 method lookup now by default skips the elements of the search
2994
+ path between the global and base environments.
2995
+
2996
+ * Added an argument add_datalist(*, small.size = 0) to allow the
2997
+ creation of a data/datalist file even when the total size of the
2998
+ data sets is small.
2999
+
3000
+ * The backquote function bquote() has a new argument splice to
3001
+ enable splicing a computed list of values into an expression,
3002
+ like ,@ in LISP's backquote.
3003
+
3004
+ * The formula interface to t.test() and wilcox.test() has been
3005
+ extended to handle one-sample and paired tests.
3006
+
3007
+ * The palette() function has a new default set of colours (which
3008
+ are less saturated and have better accessibility properties).
3009
+ There are also some new built-in palettes, which are listed by
3010
+ the new palette.pals() function. These include the old default
3011
+ palette under the name "R3". Finally, the new palette.colors()
3012
+ function allows a subset of colours to be selected from any of
3013
+ the built-in palettes.
3014
+
3015
+ * n2mfrow() gains an option asp = 1 to specify the aspect ratio,
3016
+ fulfilling the wish and extending the proposal of Michael Chirico
3017
+ in PR#17648.
3018
+
3019
+ * For head(x, n) and tail() the default and other S3 methods
3020
+ notably for _vector_ n, e.g. to get a "corner" of a matrix, has
3021
+ been extended to array's of higher dimension thanks to the patch
3022
+ proposal by Gabe Becker in PR#17652. Consequently, optional
3023
+ argument addrownums is deprecated and replaced by the (more
3024
+ general) argument keepnums. An invalid second argument n now
3025
+ leads to typically more easily readable error messages.
3026
+
3027
+ * New function .class2() provides the full character vector of
3028
+ class names used for S3 method dispatch.
3029
+
3030
+ * Printing methods(..) now uses a new format() method.
3031
+
3032
+ * sort.list(x) now works for non-atomic objects x and method =
3033
+ "auto" (the default) or "radix" in cases order(x) works,
3034
+ typically via a xtfrm() method.
3035
+
3036
+ * Where they are available, writeBin() allows long vectors.
3037
+
3038
+ * New function deparse1() produces one string, wrapping deparse(),
3039
+ to be used typically in deparse1(substitute(*)), e.g., to fix
3040
+ PR#17671.
3041
+
3042
+ * wilcox.test() enhancements: In the (non-paired) two-sample case,
3043
+ Inf values are treated as very large for robustness consistency.
3044
+ If exact computations are used, the result now has "exact" in the
3045
+ method element of its return value. New arguments tol.root and
3046
+ digits.rank where the latter may be used for stability to treat
3047
+ very close numbers as ties.
3048
+
3049
+ * readBin() and writeBin() now report an error for an invalid
3050
+ endian value. The affected code needs to be fixed with care as
3051
+ the old undocumented behavior was to swap endian-ness in such
3052
+ cases.
3053
+
3054
+ * sequence() is now an S3 generic with an internally implemented
3055
+ default method, and gains arguments to generate more complex
3056
+ sequences. Based on code from the S4Vectors Bioconductor package
3057
+ and the advice of Herv? Pag?s.
3058
+
3059
+ * print()'s default method and many other methods (by calling the
3060
+ default eventually and passing ...) now make use of a new
3061
+ optional width argument, avoiding the need for the user to set
3062
+ and reset options("width").
3063
+
3064
+ * memDecompress() supports the RFC 1952 format (e.g. in-memory
3065
+ copies of gzip-compressed files) as well as RFC 1950.
3066
+
3067
+ * memCompress() and memDecompress() support long raw vectors for
3068
+ types "gzip" and "zx".
3069
+
3070
+ * sweep() and slice.index() can now use names of dimnames for their
3071
+ MARGIN argument (apply has had this for almost a decade).
3072
+
3073
+ * New function proportions() and marginSums(). These should replace
3074
+ the unfortunately named prop.table() and margin.table(). They are
3075
+ drop-in replacements, but also add named-margin functionality.
3076
+ The old function names are retained as aliases for
3077
+ back-compatibility.
3078
+
3079
+ * Functions rbinom(), rgeom(), rhyper(), rpois(), rnbinom(),
3080
+ rsignrank() and rwilcox() which have returned integer since R
3081
+ 3.0.0 and hence NA when the numbers would have been outside the
3082
+ integer range, now return double vectors (without NAs, typically)
3083
+ in these cases.
3084
+
3085
+ * matplot(x,y) (and hence matlines() and matpoints()) now call the
3086
+ corresponding methods of plot() and lines(), e.g, when x is a
3087
+ "Date" or "POSIXct" object; prompted by Spencer Graves'
3088
+ suggestion.
3089
+
3090
+ * stopifnot() now allows customizing error messages via argument
3091
+ names, thanks to a patch proposal by Neal Fultz in PR#17688.
3092
+
3093
+ * unlink() gains a new argument expand to disable wildcard and
3094
+ tilde expansion. Elements of x of value "~" are now ignored.
3095
+
3096
+ * mle() in the stats4 package has had its interface extended so
3097
+ that arguments to the negative log-likelihood function can be one
3098
+ or more vectors, with similar conventions applying to bounds,
3099
+ start values, and parameter values to be kept fixed. This
3100
+ required a minor extension to class "mle", so saved objects from
3101
+ earlier versions may need to be recomputed.
3102
+
3103
+ * The default for pdf() is now useDingbats = FALSE.
3104
+
3105
+ * The default fill colour for hist() and boxplot() is now col =
3106
+ "lightgray".
3107
+
3108
+ * The default order of the levels on the y-axis for spineplot() and
3109
+ cdplot() has been reversed.
3110
+
3111
+ * If the R_ALWAYS_INSTALL_TESTS environment variable is set to a
3112
+ true value, R CMD INSTALL behaves as if the --install-tests
3113
+ option is always specified. Thanks to Reinhold Koch for the
3114
+ suggestion.
3115
+
3116
+ * New function R_user_dir() in package tools suggests paths
3117
+ appropriate for storing R-related user-specific data,
3118
+ configuration and cache files.
3119
+
3120
+ * capabilities() gains a new logical option Xchk to avoid warnings
3121
+ about X11-related capabilities.
3122
+
3123
+ * The internal implementation of grid units has changed, but the
3124
+ only visible effects at user-level should be
3125
+
3126
+ * a slightly different print format for some units (especially
3127
+ unit arithmetic),
3128
+
3129
+ * faster performance (for unit operations) and
3130
+
3131
+ * two new functions unitType() and unit.psum().
3132
+
3133
+ Based on code contributed by Thomas Lin Pedersen.
3134
+
3135
+ * When internal dispatch for rep.int() and rep_len() fails, there
3136
+ is an attempt to dispatch on the equivalent call to rep().
3137
+
3138
+ * Object .Machine now contains new longdouble.* entries (when R
3139
+ uses long doubles internally).
3140
+
3141
+ * news() has been enhanced to cover the news on R 3.x and 2.x.
3142
+
3143
+ * For consistency, N <- NULL; N[[1]] <- val now turns N into a list
3144
+ also when val) has length one. This enables dimnames(r1)[[1]] <-
3145
+ "R1" for a 1-row matrix r1, fixing PR#17719 reported by Serguei
3146
+ Sokol.
3147
+
3148
+ * deparse(..), dump(..), and dput(x, control = "all") now include
3149
+ control option "digits17" which typically ensures 1:1
3150
+ invertibility. New option control = "exact" ensures numeric
3151
+ exact invertibility via "hexNumeric".
3152
+
3153
+ * When loading data sets via read.table(), data() now uses
3154
+ LC_COLLATE=C to ensure locale-independent results for possible
3155
+ string-to-factor conversions.
3156
+
3157
+ * A server socket connection, a new connection type representing a
3158
+ listening server socket, is created via serverSocket() and can
3159
+ accept multiple socket connections via socketAccept().
3160
+
3161
+ * New function socketTimeout() changes the connection timeout of a
3162
+ socket connection.
3163
+
3164
+ * The time needed to start a homogeneous PSOCK cluster on localhost
3165
+ with many nodes has been significantly reduced (package
3166
+ parallel).
3167
+
3168
+ * New globalCallingHandlers() function to establish global
3169
+ condition handlers. This allows registering default handlers for
3170
+ specific condition classes. Developed in collaboration with
3171
+ Lionel Henry.
3172
+
3173
+ * New function tryInvokeRestart() to invoke a specified restart if
3174
+ one is available and return without signaling an error if no such
3175
+ restart is found. Contributed by Lionel Henry in PR#17598.
3176
+
3177
+ * str(x) now shows the length of attributes in some cases for a
3178
+ data frame x.
3179
+
3180
+ * Rprof() gains a new argument filter.callframes to request that
3181
+ intervening call frames due to lazy evaluation or explicit eval()
3182
+ calls be omitted from the recorded profile data. Contributed by
3183
+ Lionel Henry in PR#17595.
3184
+
3185
+ * The handling of ${FOO-bar} and ${FOO:-bar} in Renviron files now
3186
+ follows POSIX shells (at least on a Unix-alike), so the first
3187
+ treats empty environment variables as set and the second does
3188
+ not. Previously both ignored empty variables. There are several
3189
+ uses of the first form in etc/Renviron.
3190
+
3191
+ * New classes argument for suppressWarnings() and
3192
+ suppressMessages() to selectively suppress only warnings or
3193
+ messages that inherit from particular classes. Based on patch
3194
+ from Lionel Henry submitted with PR#17619.
3195
+
3196
+ * New function activeBindingFunction() retrieves the function of an
3197
+ active binding.
3198
+
3199
+ * New "cairoFT" and "pango" components in the output of
3200
+ grSoftVersion().
3201
+
3202
+ * New argument symbolfamily in cairo-based graphics devices and new
3203
+ function cairoSymbolFont() that can be used to provide the value
3204
+ for that argument.
3205
+
3206
+ Windows:
3207
+
3208
+ * Rterm now works also when invoked from MSYS2 terminals. Line
3209
+ editing is possible when command winpty is installed.
3210
+
3211
+ * normalizePath() now resolves symbolic links and normalizes case
3212
+ of long names of path elements in case-insensitive folders
3213
+ (PR#17165).
3214
+
3215
+ * md5sum() supports UTF-8 file names with characters that cannot be
3216
+ translated to the native encoding (PR#17633).
3217
+
3218
+ * Rterm gains a new option --workspace to specify the workspace to
3219
+ be restored. This allows equals to be part of the name when
3220
+ opening _via_ Windows file associations (reported by Christian
3221
+ Asseburg).
3222
+
3223
+ * Rterm now accepts ALT+xxx sequences also with NumLock on. Tilde
3224
+ can be pasted with an Italian keyboard (PR#17679).
3225
+
3226
+ * R falls back to copying when junction creation fails during
3227
+ package checking (patch from Duncan Murdoch).
3228
+
3229
+ DEPRECATED AND DEFUNCT:
3230
+
3231
+ * Make macro F77_VISIBILITY has been removed and replaced by
3232
+ F_VISIBILITY.
3233
+
3234
+ * Make macros F77, FCPIFCPLAGS and SHLIB_OPENMP_FCFLAGS have been
3235
+ removed and replaced by FC, FPICFLAGS and SHLIB_OPENMP_FFLAGS
3236
+ respectively. (Most make programs will set F77 to the value of
3237
+ FC, which is set for package compilation. But portable code
3238
+ should not rely on this.)
3239
+
3240
+ * The deprecated support for specifying C++98 for package
3241
+ installation has been removed.
3242
+
3243
+ * R CMD config no longer knows about the unused settings F77 and
3244
+ FCPIFCPLAGS, nor CXX98 and similar.
3245
+
3246
+ * Either PCRE2 or PCRE1 >= 8.32 (Nov 2012) is required: the
3247
+ deprecated provision for 8.20-8.31 has been removed.
3248
+
3249
+ * Defunct functions mem.limits(), .readRDS(), .saveRDS(),
3250
+ .find.package(), and .path.package() from package base and
3251
+ allGenerics(), getAccess(), getAllMethods(), getClassName(),
3252
+ getClassPackage(), getExtends(), getProperties(), getPrototype(),
3253
+ getSubclasses(), getVirtual(), mlistMetaName(),
3254
+ removeMethodsObject(), seemsS4Object(), traceOff(), and traceOn()
3255
+ from methods have been removed.
3256
+
3257
+ C-LEVEL FACILITIES:
3258
+
3259
+ * installChar is now remapped in Rinternals.h to installTrChar, of
3260
+ which it has been a wrapper since R 3.6.0. Neither are part of
3261
+ the API, but packages using installChar can replace it if they
3262
+ depend on R >= 3.6.2.
3263
+
3264
+ * Header R_ext/Print.h defines R_USE_C99_IN_CXX and hence exposes
3265
+ Rvprintf and REvprintf if used with a C++11 (or later) compiler.
3266
+
3267
+ * There are new Fortran subroutines dblepr1, realpr1 and intpr1 to
3268
+ print a scalar variable (gfortran 10 enforces the distinction
3269
+ between scalars and length-one arrays). Also labelpr to print
3270
+ just a label.
3271
+
3272
+ * R_withCallingErrorHandler is now available for establishing a
3273
+ calling handler in C code for conditions inheriting from class
3274
+ error.
3275
+
3276
+ INSTALLATION on a UNIX-ALIKE:
3277
+
3278
+ * User-set DEFS (e.g., in config.site) is now used for compiling
3279
+ packages (including base packages).
3280
+
3281
+ * There is a new variant option --enable-lto=check for checking
3282
+ consistency of BLAS/LAPACK/LINPACK calls - see 'Writing R
3283
+ Extensions'.
3284
+
3285
+ * A C++ compiler default is set only if the C++11 standard is
3286
+ supported: it no longer falls back to C++98.
3287
+
3288
+ * PCRE2 is used if available. To make use of PCRE1 if PCRE2 is
3289
+ unavailable, configure with option --with-pcre1.
3290
+
3291
+ * The minimum required version of libcurl is now 7.28.0 (Oct 2012).
3292
+
3293
+ * New make target distcheck checks
3294
+
3295
+ * R can be rebuilt from the tarball created by make dist,
3296
+
3297
+ * the build from the tarball passes make check-all,
3298
+
3299
+ * the build installs and uninstalls,
3300
+
3301
+ * the source files are properly cleaned by make distclean.
3302
+
3303
+ UTILITIES:
3304
+
3305
+ * R --help now mentions the option --no-echo (renamed from --slave)
3306
+ and its previously undocumented short form -s.
3307
+
3308
+ * R CMD check now optionally checks configure and cleanup scripts
3309
+ for non-Bourne-shell code ('bashisms').
3310
+
3311
+ * R CMD check --as-cran now runs \donttest examples (which are run
3312
+ by example()) instead of instructing the tester to do so. This
3313
+ can be temporarily circumvented during development by setting
3314
+ environment variable _R_CHECK_DONTTEST_EXAMPLES_ to a false
3315
+ value.
3316
+
3317
+ PACKAGE INSTALLATION:
3318
+
3319
+ * There is the beginnings of support for the recently approved
3320
+ C++20 standard, specified analogously to C++14 and C++17. There
3321
+ is currently only limited support for this in compilers, with
3322
+ flags such as -std=c++20 and -std=c++2a. For the time being the
3323
+ configure test is of accepting one of these flags and compiling
3324
+ C++17 code.
3325
+
3326
+ BUG FIXES:
3327
+
3328
+ * formula(x) with length(x) > 1 character vectors, is deprecated
3329
+ now. Such use has been rare, and has 'worked' as expected in
3330
+ some cases only. In other cases, wrong x have silently been
3331
+ truncated, not detecting previous errors.
3332
+
3333
+ * Long-standing issue where the X11 device could lose events
3334
+ shortly after startup has been addressed (PR#16702).
3335
+
3336
+ * The data.frame method for rbind() no longer drops <NA> levels
3337
+ from factor columns by default (PR#17562).
3338
+
3339
+ * available.packages() and hence install.packages() now pass their
3340
+ ... argument to download.file(), fulfilling the wish of PR#17532;
3341
+ subsequently, available.packages() gets new argument quiet,
3342
+ solving PR#17573.
3343
+
3344
+ * stopifnot() gets new argument exprObject to allow an R object of
3345
+ class expression (or other 'language') to work more consistently,
3346
+ thanks to suggestions by Suharto Anggono.
3347
+
3348
+ * conformMethod() now works correctly in cases containing a "&&
3349
+ logic" bug, reported by Henrik Bengtsson. It now creates methods
3350
+ with "missing" entries in the signature. Consequently,
3351
+ rematchDefinition() is amended to use appropriate .local() calls
3352
+ with named arguments where needed.
3353
+
3354
+ * format.default(*, scientific = FALSE) now corresponds to a
3355
+ practically most extreme options(scipen = n) setting rather than
3356
+ arbitrary n = 100.
3357
+
3358
+ * format(as.symbol("foo")) now works (returning "foo").
3359
+
3360
+ * postscript(.., title = *) now signals an error when the title
3361
+ string contains a character which would produce corrupt
3362
+ PostScript, thanks to PR#17607 by Daisuko Ogawa.
3363
+
3364
+ * Certain Ops (notably comparison such as ==) now also work for
3365
+ 0-length data frames, after reports by Hilmar Berger.
3366
+
3367
+ * methods(class = class(glm(..))) now warns more usefully and only
3368
+ once.
3369
+
3370
+ * write.dcf() no longer mangles field names (PR#17589).
3371
+
3372
+ * Primitive replacement functions no longer mutate a referenced
3373
+ first argument when used outside of a complex assignment context.
3374
+
3375
+ * A better error message for contour(*, levels = Inf).
3376
+
3377
+ * The return value of contourLines() is no longer invisible().
3378
+
3379
+ * The Fortran code for calculating the coefficients component in
3380
+ lm.influence() was very inefficient. It has (for now) been
3381
+ replaced with much faster R code (PR#17624).
3382
+
3383
+ * cm.colors(n) _etc_ no longer append the code for alpha = 1, "FF",
3384
+ to all colors. Hence all eight *.colors() functions and
3385
+ rainbow() behave consistently and have the same non-explicit
3386
+ default (PR#17659).
3387
+
3388
+ * dnorm had a problematic corner case with sd == -Inf or negative
3389
+ sd which was not flagged as an error in all cases. Thanks to
3390
+ Stephen D. Weigand for reporting and Wang Jiefei for analyzing
3391
+ this; similar change has been made in dlnorm().
3392
+
3393
+ * The optional iter.smooth argument of plot.lm(), (the plot()
3394
+ method for lm and glm fits) now defaults to 0 for all glm fits.
3395
+ Especially for binary observations with high or low fitted
3396
+ probabilities, this effectively deleted all observations of 1 or
3397
+ 0. Also, the type of residuals used in the glm case has been
3398
+ switched to "pearson" since deviance residuals do not in general
3399
+ have approximately zero mean.
3400
+
3401
+ * In plot.lm, Cook's distance was computed from unweighted
3402
+ residuals, leading to inconsistencies. Replaced with usual
3403
+ weighted version. (PR#16056)
3404
+
3405
+ * Time-series ts(*, start, end, frequency) with fractional
3406
+ frequency are supported more consistently; thanks to a report
3407
+ from Johann Kleinbub and analysis and patch by Duncan Murdoch in
3408
+ PR#17669.
3409
+
3410
+ * In case of errors mcmapply() now preserves attributes of returned
3411
+ "try-error" objects and avoids simplification, overriding
3412
+ SIMPLIFY to FALSE. (PR#17653)
3413
+
3414
+ * as.difftime() gets new optional tz = "UTC" argument which should
3415
+ fix behaviour during daylight-savings-changeover days, fixing
3416
+ PR#16764, thanks to proposals and analysis by Johannes Ranke and
3417
+ Kirill M?ller.
3418
+
3419
+ * round() does a better job of rounding _"to nearest"_ by
3420
+ _measuring_ and _"to even"_; thanks to a careful algorithm
3421
+ originally prompted by the report from Adam Wheeler and then
3422
+ others, in PR#17668.
3423
+ round(x, dig) for _negative_ digits is much more rational now,
3424
+ notably for large |dig|.
3425
+
3426
+ * Inheritance information on S4 classes is maintained more
3427
+ consistently, particularly in the case of class unions (in part
3428
+ due to PR#17596 and a report from Ezra Tucker).
3429
+
3430
+ * is() behaves more robustly when its argument class2 is a
3431
+ classRepresentation object.
3432
+
3433
+ * The warning message when attempting to export an nonexistent
3434
+ class is now more readable; thanks to Thierry Onkelinx for
3435
+ recognizing the problem.
3436
+
3437
+ * choose() misbehaved in corner cases where it switched n - k for k
3438
+ and n was only _nearly_ integer (report from Erik Scott Wright).
3439
+
3440
+ * mle() in the stats4 package had problems combining use of box
3441
+ constraints and fixed starting values (in particular, confidence
3442
+ intervals were affected).
3443
+
3444
+ * Operator ? now has lower precedence than = to work as documented,
3445
+ so = behaves like <- in help expressions (PR#16710).
3446
+
3447
+ * smoothEnds(x) now returns integer type in _both_ cases when x is
3448
+ integer, thanks to a report and proposal by Bill Dunlap PR#17693.
3449
+
3450
+ * The methods package does a better job of tracking inheritance
3451
+ relationships across packages.
3452
+
3453
+ * norm(diag(c(1, NA)), "2") now works.
3454
+
3455
+ * subset() had problems with 0-col dataframes (reported by Bill
3456
+ Dunlap, PR#17721).
3457
+
3458
+ * Several cases of integer overflow detected by the 'undefined
3459
+ behaviour sanitizer' of clang 10 have been circumvented. One in
3460
+ rhyper() may change the generated value for large input values.
3461
+
3462
+ * dotchart() now places the y-axis label (ylab) much better, not
3463
+ overplotting labels, thanks to a report and suggestion by Alexey
3464
+ Shipunov.
3465
+
3466
+ * A rare C-level array overflow in chull() has been worked around.
3467
+
3468
+ * Some invalid specifications of the day-of-the-year (_via_ %j,
3469
+ e.g. day 366 in 2017) or week plus day-of-the-week are now
3470
+ detected by strptime(). They now return NA but give a warning as
3471
+ they may have given random results or corrupted memory in earlier
3472
+ versions of R.
3473
+
3474
+ * socketConnection(server = FALSE) now respects the connection
3475
+ timeout also on Linux.
3476
+
3477
+ * socketConnection(server = FALSE) no longer leaks a connection
3478
+ that is available right away without waiting (e.g. on localhost).
3479
+
3480
+ * Socket connections are now robust against spurious readability
3481
+ and spurious availability of an incoming connection.
3482
+
3483
+ * blocking = FALSE is now respected also on the server side of a
3484
+ socket connection, allowing non-blocking read operations.
3485
+
3486
+ * anova.glm() and anova.glmlist() computed incorrect score (Rao)
3487
+ tests in no-intercept cases. (Andr? Gillibert, PR#17735)
3488
+
3489
+ * summaryRprof() now should work correctly for the Rprof(*,
3490
+ memory.profiling=TRUE) case with small chunk size (and "tseries"
3491
+ or similar) thanks to a patch proposal by Benjamin Tyner, in
3492
+ PR#15886.
3493
+
3494
+ * xgettext() ignores strings passed to ngettext(), since the latter
3495
+ is handled by xngettext(). Thanks to Daniele Medri for the report
3496
+ and all the recent work he has done on the Italian translations.
3497
+
3498
+ * data(package = "P") for P in base and stats no longer reports the
3499
+ data sets from package datasets (which it did for back
3500
+ compatibility for 16 years), fixing PR#17730.
3501
+
3502
+ * x[[Inf]] (returning NULL) no longer leads to undefined behavior,
3503
+ thanks to a report by Kirill M?ller in PR#17756. Further,
3504
+ x[[-Inf]] and x[[-n]] now give more helpful error messages.
3505
+
3506
+ * Gamma() family sometimes had trouble storing link name PR#15891
3507
+
3508
+ BUG FIXES (Windows):
3509
+
3510
+ * Sys.glob() now supports all characters from the Unicode Basic
3511
+ Multilingual Plane, no longer corrupting some (less commonly
3512
+ used) characters (PR#17638).
3513
+
3514
+ * Rterm now correctly displays multi-byte-coded characters
3515
+ representable in the current native encoding (at least on Windows
3516
+ 10 they were sometimes omitted, PR#17632).
3517
+
3518
+ * scan() issues with UTF-8 data when running in a DBCS locale have
3519
+ been resolved (PR#16520, PR#16584).
3520
+
3521
+ * Rterm now accepts enhanced/arrow keys also with ConPTY.
3522
+
3523
+ * R can now be started _via_ the launcher icon in a user documents
3524
+ directory whose path is not representable in the system encoding.
3525
+
3526
+ * socketConnection(server = FALSE) now returns instantly also on
3527
+ Windows when connection failure is signalled.
3528
+
3529
+ * Problems with UTF-16 surrogate pairs have been fixed in several
3530
+ functions, including tolower() and toupper() (PR#17645).
3531
+
3532
+ CHANGES in previous versions:
3533
+
3534
+ * Older news can be found in text format in files NEWS.0, NEWS.1,
3535
+ NEWS.2 and NEWS.3 in the doc directory. News in HTML format for R
3536
+ versions 3.x and from 2.10.0 to 2.15.3 are available at
3537
+ doc/html/NEWS.3.html and doc/html/NEWS.2.html.
3538
+