@opentrons/shared-data 0.1.7-alpha.1 → 0.2.0-alpha.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (258) hide show
  1. package/.coveragerc +4 -0
  2. package/.flake8 +31 -0
  3. package/Config.in +11 -0
  4. package/LICENSE +202 -0
  5. package/Makefile +13 -14
  6. package/Makefile-python.mk +134 -0
  7. package/buildroot.mk +35 -0
  8. package/command/index.ts +3 -1
  9. package/command/schemas/13.json +147 -315
  10. package/command/schemas/14.json +7254 -0
  11. package/command/types/index.ts +15 -4
  12. package/command/types/module.ts +24 -4
  13. package/command/types/setup.ts +5 -5
  14. package/command/types/support.ts +1 -0
  15. package/deck/definitions/5/ot2_short_trash.json +37 -0
  16. package/deck/definitions/5/ot2_standard.json +37 -0
  17. package/deck/definitions/5/ot3_standard.json +152 -51
  18. package/deck/schemas/5.json +46 -1
  19. package/labware/definitions/2/appliedbiosystemsmicroamp_384_wellplate_40ul/3.json +4737 -0
  20. package/labware/definitions/2/axygen_96_wellplate_500ul/1.json +1036 -0
  21. package/labware/definitions/2/axygen_96_wellplate_500ul/2.json +1159 -0
  22. package/labware/definitions/2/biorad_384_wellplate_50ul/4.json +4748 -0
  23. package/labware/definitions/2/biorad_96_wellplate_200ul_pcr/4.json +1187 -0
  24. package/labware/definitions/2/corning_12_wellplate_6.9ml_flat/4.json +210 -0
  25. package/labware/definitions/2/corning_24_wellplate_3.4ml_flat/4.json +342 -0
  26. package/labware/definitions/2/corning_48_wellplate_1.6ml_flat/5.json +610 -0
  27. package/labware/definitions/2/corning_6_wellplate_16.8ml_flat/4.json +134 -0
  28. package/labware/definitions/2/corning_96_wellplate_360ul_flat/4.json +1177 -0
  29. package/labware/definitions/2/corning_96_wellplate_360ul_lid/1.json +111 -0
  30. package/labware/definitions/2/ev_resin_tips_flex_96_labware/1.json +1 -1
  31. package/labware/definitions/2/ibidi_96_square_well_plate_300ul/1.json +1105 -0
  32. package/labware/definitions/2/ibidi_96_square_well_plate_300ul/2.json +1216 -0
  33. package/labware/definitions/2/ibidi_96_square_well_plate_300ul_lid/1.json +110 -0
  34. package/labware/definitions/2/nest_12_reservoir_22ml/1.json +232 -0
  35. package/labware/definitions/2/nest_24_wellplate_10.4ml/1.json +386 -0
  36. package/labware/definitions/2/nest_8_reservoir_22ml/1.json +162 -0
  37. package/labware/definitions/2/nest_96_wellplate_100ul_pcr_full_skirt/4.json +1166 -0
  38. package/labware/definitions/2/nest_96_wellplate_200ul_flat/4.json +1145 -0
  39. package/labware/definitions/2/nest_96_wellplate_2ml_deep/4.json +1261 -0
  40. package/labware/definitions/2/opentrons_96_wellplate_200ul_pcr_full_skirt/4.json +1174 -0
  41. package/labware/definitions/2/opentrons_flex_96_filtertiprack_1000ul/1.json +5 -0
  42. package/labware/definitions/2/opentrons_flex_96_filtertiprack_200ul/1.json +5 -0
  43. package/labware/definitions/2/opentrons_flex_96_filtertiprack_20ul/1.json +5 -0
  44. package/labware/definitions/2/opentrons_flex_96_filtertiprack_50ul/1.json +5 -0
  45. package/labware/definitions/2/opentrons_flex_96_tiprack_1000ul/1.json +5 -0
  46. package/labware/definitions/2/opentrons_flex_96_tiprack_200ul/1.json +5 -0
  47. package/labware/definitions/2/opentrons_flex_96_tiprack_20ul/1.json +5 -0
  48. package/labware/definitions/2/opentrons_flex_96_tiprack_50ul/1.json +5 -0
  49. package/labware/definitions/2/opentrons_flex_tiprack_lid/1.json +8 -8
  50. package/labware/definitions/2/opentrons_tough_pcr_auto_sealing_lid/1.json +8 -0
  51. package/labware/definitions/2/opentrons_tough_universal_lid/1.json +16 -1
  52. package/labware/definitions/2/smc_384_read_plate/1.json +4701 -0
  53. package/labware/definitions/2/smc_384_read_plate/2.json +5100 -0
  54. package/labware/definitions/2/thermoscientificnunc_96_wellplate_1300ul/3.json +1141 -0
  55. package/labware/definitions/2/thermoscientificnunc_96_wellplate_2000ul/3.json +1141 -0
  56. package/labware/definitions/2/usascientific_96_wellplate_2.4ml_deep/3.json +1243 -0
  57. package/labware/definitions/3/schema3test_96_well_aluminum_block/999.json +5 -2
  58. package/labware/definitions/3/schema3test_96_wellplate_200ul_pcr_full_skirt/999.json +15 -2
  59. package/labware/definitions/3/schema3test_aluminum_flat_bottom_plate/999.json +70 -0
  60. package/labware/definitions/3/schema3test_flex_96_tiprack_200ul/999.json +5 -9
  61. package/labware/definitions/3/schema3test_flex_96_tiprack_adapter/999.json +70 -0
  62. package/labware/definitions/3/schema3test_flex_tiprack_lid/999.json +146 -0
  63. package/labware/definitions/3/schema3test_tough_pcr_auto_sealing_lid/999.json +162 -0
  64. package/labware/definitions/3/schema3test_universal_flat_adapter/999.json +157 -0
  65. package/labware/fixtures/2/fixture_user_volumes_prototype.json +1137 -0
  66. package/labware/fixtures/3/fixture_2_plate.json +5 -2
  67. package/labware/fixtures/3/fixture_corning_24_plate.json +6 -3
  68. package/labware/fixtures/3/index.ts +4 -0
  69. package/labware/schemas/2.json +36 -1
  70. package/labware/schemas/3.json +57 -5
  71. package/lib/command/index.d.ts +39 -1
  72. package/lib/command/schemas/13.json +147 -315
  73. package/lib/command/schemas/14.json +7254 -0
  74. package/lib/command/types/index.d.ts +11 -3
  75. package/lib/command/types/module.d.ts +19 -6
  76. package/lib/command/types/setup.d.ts +5 -5
  77. package/lib/deck/definitions/5/ot2_short_trash.json +37 -0
  78. package/lib/deck/definitions/5/ot2_standard.json +37 -0
  79. package/lib/deck/definitions/5/ot3_standard.json +152 -51
  80. package/lib/deck/schemas/5.json +46 -1
  81. package/lib/index.mjs +240842 -193770
  82. package/lib/js/constants.d.ts +30 -9
  83. package/lib/js/fixtures.d.ts +77 -2
  84. package/lib/js/getLabware.d.ts +3 -3
  85. package/lib/js/helpers/__tests__/getMaxPushOutVolume.test.d.ts +1 -0
  86. package/lib/js/helpers/__tests__/getStackedItemsOnStartingDeck.test.d.ts +1 -0
  87. package/lib/js/helpers/__tests__/labwareSchemaShims.test.d.ts +1 -0
  88. package/lib/js/helpers/__tests__/pairsFromArray.test.d.ts +1 -0
  89. package/lib/js/helpers/__tests__/vectorMath.test.d.ts +1 -0
  90. package/lib/js/helpers/getFixedTrashLabwareDefinition.d.ts +2 -2
  91. package/lib/js/helpers/getLabwareDefURI.d.ts +3 -0
  92. package/lib/js/helpers/getLabwareDefinitionsByURIForProtocol.d.ts +6 -0
  93. package/lib/js/helpers/getLabwareInfoByLiquidId.d.ts +10 -0
  94. package/lib/js/helpers/getLiquidsByIdForLabware.d.ts +2 -0
  95. package/lib/js/helpers/getLoadedLabwareDefinitionsByUri.d.ts +2 -2
  96. package/lib/js/helpers/getMaxPushOutVolume.d.ts +2 -0
  97. package/lib/js/helpers/getStackedItemsOnStartingDeck.d.ts +50 -0
  98. package/lib/js/helpers/getStandardDeckViewLayerBlockList.d.ts +2 -0
  99. package/lib/js/helpers/getTipTypeFromTipRackDefinition.d.ts +2 -2
  100. package/lib/js/helpers/getWellFillFromLabwareId.d.ts +4 -0
  101. package/lib/js/helpers/getWellNamePerMultiTip.d.ts +3 -3
  102. package/lib/js/helpers/getWellTotalVolume.d.ts +2 -2
  103. package/lib/js/helpers/index.d.ts +22 -14
  104. package/lib/js/helpers/labwareInference.d.ts +3 -3
  105. package/lib/js/helpers/liquidClasses.d.ts +4 -2
  106. package/lib/js/helpers/matrixMath.d.ts +3 -0
  107. package/lib/js/helpers/pairsFromArray.d.ts +8 -0
  108. package/lib/js/helpers/parseProtocolCommands.d.ts +4 -4
  109. package/lib/js/helpers/positionMath.d.ts +127 -0
  110. package/lib/js/helpers/validateCustomLabwareHelper.d.ts +2 -2
  111. package/lib/js/helpers/vectorMath.d.ts +14 -0
  112. package/lib/js/helpers/wellSets.d.ts +4 -4
  113. package/lib/js/labware.d.ts +4 -3
  114. package/lib/js/liquidClasses.d.ts +4 -0
  115. package/lib/js/modules.d.ts +1 -1
  116. package/lib/js/types.d.ts +62 -13
  117. package/lib/labware/definitions/2/appliedbiosystemsmicroamp_384_wellplate_40ul/3.json +4737 -0
  118. package/lib/labware/definitions/2/axygen_96_wellplate_500ul/1.json +1036 -0
  119. package/lib/labware/definitions/2/axygen_96_wellplate_500ul/2.json +1159 -0
  120. package/lib/labware/definitions/2/biorad_384_wellplate_50ul/4.json +4748 -0
  121. package/lib/labware/definitions/2/biorad_96_wellplate_200ul_pcr/4.json +1187 -0
  122. package/lib/labware/definitions/2/corning_12_wellplate_6.9ml_flat/4.json +210 -0
  123. package/lib/labware/definitions/2/corning_24_wellplate_3.4ml_flat/4.json +342 -0
  124. package/lib/labware/definitions/2/corning_48_wellplate_1.6ml_flat/5.json +610 -0
  125. package/lib/labware/definitions/2/corning_6_wellplate_16.8ml_flat/4.json +134 -0
  126. package/lib/labware/definitions/2/corning_96_wellplate_360ul_flat/4.json +1177 -0
  127. package/lib/labware/definitions/2/corning_96_wellplate_360ul_lid/1.json +111 -0
  128. package/lib/labware/definitions/2/ev_resin_tips_flex_96_labware/1.json +1 -1
  129. package/lib/labware/definitions/2/ibidi_96_square_well_plate_300ul/1.json +1105 -0
  130. package/lib/labware/definitions/2/ibidi_96_square_well_plate_300ul/2.json +1216 -0
  131. package/lib/labware/definitions/2/ibidi_96_square_well_plate_300ul_lid/1.json +110 -0
  132. package/lib/labware/definitions/2/nest_12_reservoir_22ml/1.json +232 -0
  133. package/lib/labware/definitions/2/nest_24_wellplate_10.4ml/1.json +386 -0
  134. package/lib/labware/definitions/2/nest_8_reservoir_22ml/1.json +162 -0
  135. package/lib/labware/definitions/2/nest_96_wellplate_100ul_pcr_full_skirt/4.json +1166 -0
  136. package/lib/labware/definitions/2/nest_96_wellplate_200ul_flat/4.json +1145 -0
  137. package/lib/labware/definitions/2/nest_96_wellplate_2ml_deep/4.json +1261 -0
  138. package/lib/labware/definitions/2/opentrons_96_wellplate_200ul_pcr_full_skirt/4.json +1174 -0
  139. package/lib/labware/definitions/2/opentrons_flex_96_filtertiprack_1000ul/1.json +5 -0
  140. package/lib/labware/definitions/2/opentrons_flex_96_filtertiprack_200ul/1.json +5 -0
  141. package/lib/labware/definitions/2/opentrons_flex_96_filtertiprack_20ul/1.json +5 -0
  142. package/lib/labware/definitions/2/opentrons_flex_96_filtertiprack_50ul/1.json +5 -0
  143. package/lib/labware/definitions/2/opentrons_flex_96_tiprack_1000ul/1.json +5 -0
  144. package/lib/labware/definitions/2/opentrons_flex_96_tiprack_200ul/1.json +5 -0
  145. package/lib/labware/definitions/2/opentrons_flex_96_tiprack_20ul/1.json +5 -0
  146. package/lib/labware/definitions/2/opentrons_flex_96_tiprack_50ul/1.json +5 -0
  147. package/lib/labware/definitions/2/opentrons_flex_tiprack_lid/1.json +8 -8
  148. package/lib/labware/definitions/2/opentrons_tough_pcr_auto_sealing_lid/1.json +8 -0
  149. package/lib/labware/definitions/2/opentrons_tough_universal_lid/1.json +16 -1
  150. package/lib/labware/definitions/2/smc_384_read_plate/1.json +4701 -0
  151. package/lib/labware/definitions/2/smc_384_read_plate/2.json +5100 -0
  152. package/lib/labware/definitions/2/thermoscientificnunc_96_wellplate_1300ul/3.json +1141 -0
  153. package/lib/labware/definitions/2/thermoscientificnunc_96_wellplate_2000ul/3.json +1141 -0
  154. package/lib/labware/definitions/2/usascientific_96_wellplate_2.4ml_deep/3.json +1243 -0
  155. package/lib/labware/definitions/3/schema3test_96_well_aluminum_block/999.json +5 -2
  156. package/lib/labware/definitions/3/schema3test_96_wellplate_200ul_pcr_full_skirt/999.json +15 -2
  157. package/lib/labware/definitions/3/schema3test_aluminum_flat_bottom_plate/999.json +70 -0
  158. package/lib/labware/definitions/3/schema3test_flex_96_tiprack_200ul/999.json +5 -9
  159. package/lib/labware/definitions/3/schema3test_flex_96_tiprack_adapter/999.json +70 -0
  160. package/lib/labware/definitions/3/schema3test_flex_tiprack_lid/999.json +146 -0
  161. package/lib/labware/definitions/3/schema3test_tough_pcr_auto_sealing_lid/999.json +162 -0
  162. package/lib/labware/definitions/3/schema3test_universal_flat_adapter/999.json +157 -0
  163. package/lib/labware/fixtures/2/fixture_user_volumes_prototype.json +1137 -0
  164. package/lib/labware/fixtures/3/fixture_2_plate.json +5 -2
  165. package/lib/labware/fixtures/3/fixture_corning_24_plate.json +6 -3
  166. package/lib/labware/fixtures/3/index.d.ts +3 -0
  167. package/lib/labware/schemas/2.json +36 -1
  168. package/lib/labware/schemas/3.json +57 -5
  169. package/lib/liquid-class/definitions/1/{ethanol_80.json → ethanol_80/1.json} +545 -390
  170. package/lib/liquid-class/definitions/1/{glycerol_50.json → glycerol_50/1.json} +370 -215
  171. package/lib/liquid-class/definitions/1/{water.json → water/1.json} +151 -62
  172. package/lib/liquid-class/fixtures/1/fixture_glycerol50.json +1 -0
  173. package/lib/liquid-class/schemas/1.json +6 -0
  174. package/lib/module/definitions/3/absorbanceReaderV1.json +20 -151
  175. package/lib/module/definitions/3/flexStackerModuleV1.json +29 -389
  176. package/lib/module/definitions/3/heaterShakerModuleV1.json +16 -357
  177. package/lib/module/definitions/3/magneticBlockV1.json +18 -149
  178. package/lib/module/definitions/3/magneticModuleV1.json +16 -399
  179. package/lib/module/definitions/3/magneticModuleV2.json +16 -399
  180. package/lib/module/definitions/3/temperatureModuleV1.json +16 -153
  181. package/lib/module/definitions/3/temperatureModuleV2.json +16 -153
  182. package/lib/module/definitions/3/thermocyclerModuleV1.json +16 -1340
  183. package/lib/module/definitions/3/thermocyclerModuleV2.json +18 -3617
  184. package/lib/module/schemas/3.json +109 -12
  185. package/lib/pipette/definitions/1/pipetteModelSpecs.json +336 -0
  186. package/lib/pipette/definitions/2/general/ninety_six_channel/p200/3_2.json +660 -0
  187. package/lib/pipette/definitions/2/geometry/ninety_six_channel/p200/3_2.json +309 -0
  188. package/lib/pipette/definitions/2/liquid/ninety_six_channel/p200/default/3_1.json +28 -18
  189. package/lib/pipette/definitions/2/liquid/ninety_six_channel/p200/default/3_2.json +192 -0
  190. package/lib/protocol/types/schemaV8/index.d.ts +17 -1
  191. package/liquid-class/definitions/1/{ethanol_80.json → ethanol_80/1.json} +545 -390
  192. package/liquid-class/definitions/1/{glycerol_50.json → glycerol_50/1.json} +370 -215
  193. package/liquid-class/definitions/1/{water.json → water/1.json} +151 -62
  194. package/liquid-class/fixtures/1/fixture_glycerol50.json +1 -0
  195. package/liquid-class/schemas/1.json +6 -0
  196. package/module/definitions/3/absorbanceReaderV1.json +20 -151
  197. package/module/definitions/3/flexStackerModuleV1.json +29 -389
  198. package/module/definitions/3/heaterShakerModuleV1.json +16 -357
  199. package/module/definitions/3/magneticBlockV1.json +18 -149
  200. package/module/definitions/3/magneticModuleV1.json +16 -399
  201. package/module/definitions/3/magneticModuleV2.json +16 -399
  202. package/module/definitions/3/temperatureModuleV1.json +16 -153
  203. package/module/definitions/3/temperatureModuleV2.json +16 -153
  204. package/module/definitions/3/thermocyclerModuleV1.json +16 -1340
  205. package/module/definitions/3/thermocyclerModuleV2.json +18 -3617
  206. package/module/schemas/3.json +109 -12
  207. package/mypy.ini +22 -0
  208. package/package.json +1 -1
  209. package/pipette/definitions/1/pipetteModelSpecs.json +336 -0
  210. package/pipette/definitions/2/general/ninety_six_channel/p200/3_2.json +660 -0
  211. package/pipette/definitions/2/geometry/ninety_six_channel/p200/3_2.json +309 -0
  212. package/pipette/definitions/2/liquid/ninety_six_channel/p200/default/3_1.json +28 -18
  213. package/pipette/definitions/2/liquid/ninety_six_channel/p200/default/3_2.json +192 -0
  214. package/protocol/types/schemaV8/index.ts +29 -1
  215. package/pyproject.toml +119 -0
  216. package/pytest.ini +8 -0
  217. package/python_tests/__init__.py +1 -0
  218. package/python_tests/command/test_known_schema_ids.py +9 -0
  219. package/python_tests/conftest.py +108 -0
  220. package/python_tests/deck/__init__.py +0 -0
  221. package/python_tests/deck/test_list_names.py +12 -0
  222. package/python_tests/deck/test_position.py +101 -0
  223. package/python_tests/deck/test_typechecks.py +23 -0
  224. package/python_tests/errors/__init__.py +1 -0
  225. package/python_tests/errors/test_error_completeness.py +19 -0
  226. package/python_tests/errors/test_exceptions.py +74 -0
  227. package/python_tests/gripper/__init__.py +0 -0
  228. package/python_tests/gripper/test_definition.py +30 -0
  229. package/python_tests/gripper/test_load.py +19 -0
  230. package/python_tests/labware/__init__.py +13 -0
  231. package/python_tests/labware/test_typechecks.py +80 -0
  232. package/python_tests/liquid_classes/__init__.py +0 -0
  233. package/python_tests/liquid_classes/test_liquid_class_values.py +59 -0
  234. package/python_tests/liquid_classes/test_load.py +45 -0
  235. package/python_tests/liquid_classes/test_validations.py +192 -0
  236. package/python_tests/module/__init__.py +20 -0
  237. package/python_tests/module/test_load.py +49 -0
  238. package/python_tests/module/test_typechecks.py +26 -0
  239. package/python_tests/pipette/__init__.py +0 -0
  240. package/python_tests/pipette/test_load_data.py +109 -0
  241. package/python_tests/pipette/test_max_flow_rates_per_volume.py +112 -0
  242. package/python_tests/pipette/test_mutable_configurations.py +467 -0
  243. package/python_tests/pipette/test_pipette_definition.py +183 -0
  244. package/python_tests/pipette/test_pipette_load_name_conversions.py +244 -0
  245. package/python_tests/pipette/test_typechecks.py +47 -0
  246. package/python_tests/pipette/test_validate_schema.py +198 -0
  247. package/python_tests/protocol/__init__.py +7 -0
  248. package/python_tests/protocol/test_protocol_schema_v6.py +108 -0
  249. package/python_tests/protocol/test_protocol_schema_v7.py +35 -0
  250. package/python_tests/protocol/test_protocol_schema_v8.py +17 -0
  251. package/python_tests/protocol/test_typechecks.py +30 -0
  252. package/python_tests/robot/__init__.py +0 -0
  253. package/python_tests/robot/test_typechecks.py +13 -0
  254. package/lib/js/cypressUtils.d.ts +0 -1
  255. package/lib/js/helpers/getVectorDifference.d.ts +0 -2
  256. package/lib/js/helpers/getVectorSum.d.ts +0 -2
  257. /package/lib/js/{helpers/__tests__/getVectorDifference.test.d.ts → __tests__/fixtures.test.d.ts} +0 -0
  258. /package/lib/js/helpers/__tests__/{getVectorSum.test.d.ts → getLabwareInfoByLiquidId.test.d.ts} +0 -0
package/labware/definitions/2/ibidi_96_square_well_plate_300ul/2.json ADDED
@@ -0,0 +1,1216 @@
1
+ {
2
+ "brand": { "brand": "ibidi", "brandId": ["89626", "89621"] },
3
+ "wells": {
4
+ "A1": {
5
+ "x": 14.38,
6
+ "y": 74.24,
7
+ "z": 1,
8
+ "depth": 12.9,
9
+ "shape": "rectangular",
10
+ "xDimension": 7.4,
11
+ "yDimension": 7.4,
12
+ "totalLiquidVolume": 300,
13
+ "geometryDefinitionId": "rectangularWell"
14
+ },
15
+ "A2": {
16
+ "x": 23.38,
17
+ "y": 74.24,
18
+ "z": 1,
19
+ "depth": 12.9,
20
+ "shape": "rectangular",
21
+ "xDimension": 7.4,
22
+ "yDimension": 7.4,
23
+ "totalLiquidVolume": 300,
24
+ "geometryDefinitionId": "rectangularWell"
25
+ },
26
+ "A3": {
27
+ "x": 32.38,
28
+ "y": 74.24,
29
+ "z": 1,
30
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