@nfdi4plants/arctrl 3.0.0-beta.4 → 3.0.0-beta.6

package/dist/ts/ts/Json/Process/MaterialAttributeValue.js

@@ -1,18 +1,18 @@
-import { decoder as decoder$2, encoder, genID } from '../PropertyValue.js';
-import { MaterialAttributeValue, MaterialAttributeValue_createAsPV } from '../../Core/Process/MaterialAttributeValue.js';
-import { value, map } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
+import { encoder, decoder, genID } from '../PropertyValue.js';
+import { MaterialAttributeValue_createAsPV, MaterialAttributeValue } from '../../Core/Process/MaterialAttributeValue.js';
+import { map, value } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
 import { choose, ofArray } from '../../../node_modules/@fable-org/fable-library-js/List.js';
 import { tryInclude } from '../Encode.js';
-import { decoder, encoder as encoder$1 } from './MaterialAttribute.js';
-import { decoder as decoder$1, encoder as encoder$2 } from './Value.js';
-import { OntologyAnnotation_ISAJson_decoder, OntologyAnnotation_ISAJson_encoder } from '../OntologyAnnotation.js';
+import { encoder as encoder$1, decoder as decoder$1 } from './MaterialAttribute.js';
+import { encoder as encoder$2, decoder as decoder$2 } from './Value.js';
+import { OntologyAnnotation_ISAJson_encoder, OntologyAnnotation_ISAJson_decoder } from '../OntologyAnnotation.js';
 import { map as map$1 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { encode } from '../IDTable.js';
 import { object } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 import { Decode_uri } from '../Decode.js';
 
 const ROCrate_encoder = encoder;
-const ROCrate_decoder = decoder$2(MaterialAttributeValue_createAsPV);
+const ROCrate_decoder = decoder(MaterialAttributeValue_createAsPV);
 function ISAJson_genID(oa) {
   return genID(oa);
 }
@@ -38,7 +38,7 @@ function ISAJson_encoder(idMap, oa) {
 }
 const ISAJson_decoder = object((get$) => {
   let objectArg, objectArg_1, objectArg_2, objectArg_3;
-  return new MaterialAttributeValue((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("category", decoder)), (objectArg_2 = get$.Optional, objectArg_2.Field("value", decoder$1)), (objectArg_3 = get$.Optional, objectArg_3.Field("unit", OntologyAnnotation_ISAJson_decoder)));
+  return new MaterialAttributeValue((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("category", decoder$1)), (objectArg_2 = get$.Optional, objectArg_2.Field("value", decoder$2)), (objectArg_3 = get$.Optional, objectArg_3.Field("unit", OntologyAnnotation_ISAJson_decoder)));
 });
 
 export { ISAJson_decoder, ISAJson_encoder, ISAJson_genID, ROCrate_decoder, ROCrate_encoder };

package/dist/ts/ts/Json/Process/Process.js

@@ -1,19 +1,19 @@
-import { map, value } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
+import { value, map } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
 import { replace } from '../../../node_modules/@fable-org/fable-library-js/String.js';
 import { URIModule_toString } from '../../Core/URI.js';
 import { Process } from '../../Core/Process/Process.js';
 import { choose, ofArray, singleton } from '../../../node_modules/@fable-org/fable-library-js/List.js';
-import { list as list$1 } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
+import { list } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
 import { tryInclude, tryIncludeListOpt } from '../Encode.js';
-import { ISAJson_decoder as ISAJson_decoder$1, ROCrate_decoder as ROCrate_decoder$1, ROCrate_encoder as ROCrate_encoder$1, ISAJson_encoder as ISAJson_encoder$1 } from './Protocol.js';
-import { ISAJson_decoder as ISAJson_decoder$2, ROCrate_decoder as ROCrate_decoder$2, ROCrate_encoder as ROCrate_encoder$2, ISAJson_encoder as ISAJson_encoder$2 } from './ProcessParameterValue.js';
-import { ROCrate_decodeAuthorListString, ROCrate_encodeAuthorListString } from '../Person.js';
-import { ISAJson_decoder as ISAJson_decoder$3, ROCrate_decoder as ROCrate_decoder$3, ROCrate_encoder as ROCrate_encoder$3, ISAJson_encoder as ISAJson_encoder$3 } from './ProcessInput.js';
-import { ISAJson_decoder as ISAJson_decoder$4, ROCrate_decoder as ROCrate_decoder$4, ROCrate_encoder as ROCrate_encoder$4, ISAJson_encoder as ISAJson_encoder$4 } from './ProcessOutput.js';
-import { ISAJson_decoder as ISAJson_decoder$5, ROCrate_decoder as ROCrate_decoder$5, ROCrate_encoder as ROCrate_encoder$5, ISAJson_encoder as ISAJson_encoder$5 } from '../Comment.js';
+import { ROCrate_encoder as ROCrate_encoder$1, ROCrate_decoder as ROCrate_decoder$1, ISAJson_encoder as ISAJson_encoder$1, ISAJson_decoder as ISAJson_decoder$1 } from './Protocol.js';
+import { ROCrate_encoder as ROCrate_encoder$2, ROCrate_decoder as ROCrate_decoder$2, ISAJson_encoder as ISAJson_encoder$2, ISAJson_decoder as ISAJson_decoder$2 } from './ProcessParameterValue.js';
+import { ROCrate_encodeAuthorListString, ROCrate_decodeAuthorListString } from '../Person.js';
+import { ROCrate_encoder as ROCrate_encoder$3, ROCrate_decoder as ROCrate_decoder$3, ISAJson_encoder as ISAJson_encoder$3, ISAJson_decoder as ISAJson_decoder$3 } from './ProcessInput.js';
+import { ROCrate_encoder as ROCrate_encoder$4, ROCrate_decoder as ROCrate_decoder$4, ISAJson_encoder as ISAJson_encoder$4, ISAJson_decoder as ISAJson_decoder$4 } from './ProcessOutput.js';
+import { ROCrate_encoder as ROCrate_encoder$5, ROCrate_decoder as ROCrate_decoder$5, ISAJson_encoder as ISAJson_encoder$5, ISAJson_decoder as ISAJson_decoder$5 } from '../Comment.js';
 import { context_jsonvalue } from '../context/rocrate/isa_process_context.js';
 import { map as map$1 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
-import { object, string, list } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
+import { object, string, list as list$1 } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 import { Decode_uri } from '../Decode.js';
 import { encode } from '../IDTable.js';
 
@@ -36,7 +36,7 @@ function ROCrate_encoder(studyName, assayName, oa) {
     Encode(helpers) {
       return helpers.encodeString(value);
     }
-  })], ["@type", list$1(singleton({
+  })], ["@type", list(singleton({
     Encode(helpers_1) {
       return helpers_1.encodeString("Process");
     }
@@ -58,7 +58,7 @@ function ROCrate_encoder(studyName, assayName, oa) {
 }
 const ROCrate_decoder = object((get$) => {
   let objectArg, objectArg_1, objectArg_2, arg_7, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8;
-  return new Process((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("name", string)), (objectArg_2 = get$.Optional, objectArg_2.Field("executesProtocol", ROCrate_decoder$1)), (arg_7 = list(ROCrate_decoder$2), objectArg_3 = get$.Optional, objectArg_3.Field("parameterValues", arg_7)), (objectArg_4 = get$.Optional, objectArg_4.Field("performer", ROCrate_decodeAuthorListString)), (objectArg_5 = get$.Optional, objectArg_5.Field("date", string)), void 0, void 0, (arg_13 = list(ROCrate_decoder$3), objectArg_6 = get$.Optional, objectArg_6.Field("inputs", arg_13)), (arg_15 = list(ROCrate_decoder$4), objectArg_7 = get$.Optional, objectArg_7.Field("outputs", arg_15)), (arg_17 = list(ROCrate_decoder$5), objectArg_8 = get$.Optional, objectArg_8.Field("comments", arg_17)));
+  return new Process((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("name", string)), (objectArg_2 = get$.Optional, objectArg_2.Field("executesProtocol", ROCrate_decoder$1)), (arg_7 = list$1(ROCrate_decoder$2), objectArg_3 = get$.Optional, objectArg_3.Field("parameterValues", arg_7)), (objectArg_4 = get$.Optional, objectArg_4.Field("performer", ROCrate_decodeAuthorListString)), (objectArg_5 = get$.Optional, objectArg_5.Field("date", string)), void 0, void 0, (arg_13 = list$1(ROCrate_decoder$3), objectArg_6 = get$.Optional, objectArg_6.Field("inputs", arg_13)), (arg_15 = list$1(ROCrate_decoder$4), objectArg_7 = get$.Optional, objectArg_7.Field("outputs", arg_15)), (arg_17 = list$1(ROCrate_decoder$5), objectArg_8 = get$.Optional, objectArg_8.Field("comments", arg_17)));
 });
 function ISAJson_encoder(studyName, assayName, idMap, oa) {
   const f = (oa_1) => {
@@ -95,7 +95,7 @@ function ISAJson_encoder(studyName, assayName, idMap, oa) {
 const ISAJson_decoder = (() => {
   const decode = () => object((get$) => {
     let objectArg, objectArg_1, objectArg_2, arg_7, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8, arg_19, objectArg_9, arg_21, objectArg_10;
-    return new Process((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("name", string)), (objectArg_2 = get$.Optional, objectArg_2.Field("executesProtocol", ISAJson_decoder$1)), (arg_7 = list(ISAJson_decoder$2), objectArg_3 = get$.Optional, objectArg_3.Field("parameterValues", arg_7)), (objectArg_4 = get$.Optional, objectArg_4.Field("performer", string)), (objectArg_5 = get$.Optional, objectArg_5.Field("date", string)), (arg_13 = decode(), objectArg_6 = get$.Optional, objectArg_6.Field("previousProcess", arg_13)), (arg_15 = decode(), objectArg_7 = get$.Optional, objectArg_7.Field("nextProcess", arg_15)), (arg_17 = list(ISAJson_decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("inputs", arg_17)), (arg_19 = list(ISAJson_decoder$4), objectArg_9 = get$.Optional, objectArg_9.Field("outputs", arg_19)), (arg_21 = list(ISAJson_decoder$5), objectArg_10 = get$.Optional, objectArg_10.Field("comments", arg_21)));
+    return new Process((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("name", string)), (objectArg_2 = get$.Optional, objectArg_2.Field("executesProtocol", ISAJson_decoder$1)), (arg_7 = list$1(ISAJson_decoder$2), objectArg_3 = get$.Optional, objectArg_3.Field("parameterValues", arg_7)), (objectArg_4 = get$.Optional, objectArg_4.Field("performer", string)), (objectArg_5 = get$.Optional, objectArg_5.Field("date", string)), (arg_13 = decode(), objectArg_6 = get$.Optional, objectArg_6.Field("previousProcess", arg_13)), (arg_15 = decode(), objectArg_7 = get$.Optional, objectArg_7.Field("nextProcess", arg_15)), (arg_17 = list$1(ISAJson_decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("inputs", arg_17)), (arg_19 = list$1(ISAJson_decoder$4), objectArg_9 = get$.Optional, objectArg_9.Field("outputs", arg_19)), (arg_21 = list$1(ISAJson_decoder$5), objectArg_10 = get$.Optional, objectArg_10.Field("comments", arg_21)));
   });
   return decode();
 })();

package/dist/ts/ts/Json/Process/ProcessInput.js

@@ -1,7 +1,7 @@
-import { ROCrate_decoder as ROCrate_decoder$1, ISAJson_decoder as ISAJson_decoder$2, ROCrate_encoder as ROCrate_encoder$4, ISAJson_encoder as ISAJson_encoder$4 } from './Sample.js';
-import { ROCrate_decoder as ROCrate_decoder$3, ISAJson_decoder as ISAJson_decoder$3, ROCrate_encoder as ROCrate_encoder$3, ISAJson_encoder as ISAJson_encoder$3 } from '../Data.js';
-import { ROCrate_decoder as ROCrate_decoder$4, ISAJson_decoder as ISAJson_decoder$4, ROCrate_encoder as ROCrate_encoder$2, ISAJson_encoder as ISAJson_encoder$2 } from './Material.js';
-import { ROCrate_decoder as ROCrate_decoder$2, ISAJson_decoder as ISAJson_decoder$1, ROCrate_encoder as ROCrate_encoder$1, ISAJson_encoder as ISAJson_encoder$1 } from './Source.js';
+import { ROCrate_encoder as ROCrate_encoder$4, ROCrate_decoder as ROCrate_decoder$1, ISAJson_encoder as ISAJson_encoder$4, ISAJson_decoder as ISAJson_decoder$2 } from './Sample.js';
+import { ROCrate_encoder as ROCrate_encoder$3, ROCrate_decoder as ROCrate_decoder$3, ISAJson_encoder as ISAJson_encoder$3, ISAJson_decoder as ISAJson_decoder$3 } from '../Data.js';
+import { ROCrate_encoder as ROCrate_encoder$2, ROCrate_decoder as ROCrate_decoder$4, ISAJson_encoder as ISAJson_encoder$2, ISAJson_decoder as ISAJson_decoder$4 } from './Material.js';
+import { ROCrate_encoder as ROCrate_encoder$1, ROCrate_decoder as ROCrate_decoder$2, ISAJson_encoder as ISAJson_encoder$1, ISAJson_decoder as ISAJson_decoder$1 } from './Source.js';
 import { ProcessInput_Sample, ProcessInput_Source, ProcessInput_Data, ProcessInput_Material } from '../../Core/Process/ProcessInput.js';
 import { oneOf, map } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 import { ofArray } from '../../../node_modules/@fable-org/fable-library-js/List.js';

package/dist/ts/ts/Json/Process/ProcessOutput.js

@@ -1,6 +1,6 @@
-import { ROCrate_decoder as ROCrate_decoder$2, ISAJson_decoder as ISAJson_decoder$2, ROCrate_encoder as ROCrate_encoder$3, ISAJson_encoder as ISAJson_encoder$3 } from '../Data.js';
-import { ROCrate_decoder as ROCrate_decoder$3, ISAJson_decoder as ISAJson_decoder$3, ROCrate_encoder as ROCrate_encoder$2, ISAJson_encoder as ISAJson_encoder$2 } from './Material.js';
-import { ROCrate_decoder as ROCrate_decoder$1, ISAJson_decoder as ISAJson_decoder$1, ROCrate_encoder as ROCrate_encoder$1, ISAJson_encoder as ISAJson_encoder$1 } from './Sample.js';
+import { ROCrate_encoder as ROCrate_encoder$3, ROCrate_decoder as ROCrate_decoder$2, ISAJson_encoder as ISAJson_encoder$3, ISAJson_decoder as ISAJson_decoder$2 } from '../Data.js';
+import { ROCrate_encoder as ROCrate_encoder$2, ROCrate_decoder as ROCrate_decoder$3, ISAJson_encoder as ISAJson_encoder$2, ISAJson_decoder as ISAJson_decoder$3 } from './Material.js';
+import { ROCrate_encoder as ROCrate_encoder$1, ROCrate_decoder as ROCrate_decoder$1, ISAJson_encoder as ISAJson_encoder$1, ISAJson_decoder as ISAJson_decoder$1 } from './Sample.js';
 import { ProcessOutput_Sample, ProcessOutput_Data, ProcessOutput_Material } from '../../Core/Process/ProcessOutput.js';
 import { oneOf, map } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 import { ofArray } from '../../../node_modules/@fable-org/fable-library-js/List.js';

package/dist/ts/ts/Json/Process/ProcessParameterValue.js

@@ -1,18 +1,21 @@
-import { decoder as decoder$2, encoder } from '../PropertyValue.js';
+import { encoder, decoder } from '../PropertyValue.js';
 import { ProcessParameterValue } from '../../Core/Process/ProcessParameterValue.js';
 import { map } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
 import { choose, ofArray } from '../../../node_modules/@fable-org/fable-library-js/List.js';
 import { tryInclude } from '../Encode.js';
-import { decoder, encoder as encoder$1 } from './ProtocolParameter.js';
-import { decoder as decoder$1, encoder as encoder$2 } from './Value.js';
-import { OntologyAnnotation_ISAJson_decoder, OntologyAnnotation_ISAJson_encoder } from '../OntologyAnnotation.js';
+import { ISAJson_encoder as ISAJson_encoder$1, ISAJson_decoder as ISAJson_decoder$1 } from './ProtocolParameter.js';
+import { encoder as encoder$1, decoder as decoder$1 } from './Value.js';
+import { OntologyAnnotation_ISAJson_encoder, OntologyAnnotation_ISAJson_decoder } from '../OntologyAnnotation.js';
 import { map as map$1 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { object } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 
 const ROCrate_encoder = encoder;
-const ROCrate_decoder = decoder$2((alternateName, measurementMethod, description, category, value, unit) => ProcessParameterValue.createAsPV(alternateName, measurementMethod, description, category, value, unit));
+const ROCrate_decoder = decoder((alternateName, measurementMethod, description, category, value, unit) => ProcessParameterValue.createAsPV(alternateName, measurementMethod, description, category, value, unit));
+function ISAJson_genID(oa) {
+  throw new Error("Not implemented");
+}
 function ISAJson_encoder(idMap, oa) {
-  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([tryInclude("category", (value) => encoder$1(idMap, value), oa.Category), tryInclude("value", (value_1) => encoder$2(idMap, value_1), oa.Value), tryInclude("unit", (oa_1) => OntologyAnnotation_ISAJson_encoder(idMap, oa_1), oa.Unit)]));
+  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([tryInclude("category", (value) => ISAJson_encoder$1(idMap, value), oa.Category), tryInclude("value", (value_1) => encoder$1(idMap, value_1), oa.Value), tryInclude("unit", (oa_1) => OntologyAnnotation_ISAJson_encoder(idMap, oa_1), oa.Unit)]));
   return {
     Encode(helpers) {
       const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers)], values_1);
@@ -22,7 +25,7 @@ function ISAJson_encoder(idMap, oa) {
 }
 const ISAJson_decoder = object((get$) => {
   let objectArg, objectArg_1, objectArg_2;
-  return new ProcessParameterValue((objectArg = get$.Optional, objectArg.Field("category", decoder)), (objectArg_1 = get$.Optional, objectArg_1.Field("value", decoder$1)), (objectArg_2 = get$.Optional, objectArg_2.Field("unit", OntologyAnnotation_ISAJson_decoder)));
+  return new ProcessParameterValue((objectArg = get$.Optional, objectArg.Field("category", ISAJson_decoder$1)), (objectArg_1 = get$.Optional, objectArg_1.Field("value", decoder$1)), (objectArg_2 = get$.Optional, objectArg_2.Field("unit", OntologyAnnotation_ISAJson_decoder)));
 });
 
-export { ISAJson_decoder, ISAJson_encoder, ROCrate_decoder, ROCrate_encoder };
+export { ISAJson_decoder, ISAJson_encoder, ISAJson_genID, ROCrate_decoder, ROCrate_encoder };

package/dist/ts/ts/Json/Process/Protocol.js

@@ -1,18 +1,18 @@
-import { defaultArg, map, value } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
+import { value, map, defaultArg } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
 import { replace } from '../../../node_modules/@fable-org/fable-library-js/String.js';
 import { Protocol } from '../../Core/Process/Protocol.js';
-import { append, empty, choose, ofArray, singleton } from '../../../node_modules/@fable-org/fable-library-js/List.js';
-import { list as list$1 } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
+import { choose, ofArray, singleton, empty, append } from '../../../node_modules/@fable-org/fable-library-js/List.js';
+import { list } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
 import { tryInclude, tryIncludeListOpt } from '../Encode.js';
-import { OntologyAnnotation_ISAJson_decoder, OntologyAnnotation_ROCrate_decoderDefinedTerm, OntologyAnnotation_ROCrate_encoderDefinedTerm, OntologyAnnotation_ISAJson_encoder } from '../OntologyAnnotation.js';
-import { ISAJson_decoder as ISAJson_decoder$1, ROCrate_decoder as ROCrate_decoder$1, ROCrate_encoder as ROCrate_encoder$1, ISAJson_encoder as ISAJson_encoder$1 } from './Component.js';
-import { ISAJson_decoder as ISAJson_decoder$2, ROCrate_decoder as ROCrate_decoder$2, ROCrate_encoder as ROCrate_encoder$2, ISAJson_encoder as ISAJson_encoder$2 } from '../Comment.js';
+import { OntologyAnnotation_ROCrate_encoderDefinedTerm, OntologyAnnotation_ROCrate_decoderDefinedTerm, OntologyAnnotation_ISAJson_encoder, OntologyAnnotation_ISAJson_decoder } from '../OntologyAnnotation.js';
+import { ROCrate_encoder as ROCrate_encoder$1, ROCrate_decoder as ROCrate_decoder$1, ISAJson_encoder as ISAJson_encoder$2, ISAJson_decoder as ISAJson_decoder$2 } from './Component.js';
+import { ROCrate_encoder as ROCrate_encoder$2, ROCrate_decoder as ROCrate_decoder$2, ISAJson_encoder as ISAJson_encoder$3, ISAJson_decoder as ISAJson_decoder$3 } from '../Comment.js';
 import { context_jsonvalue } from '../context/rocrate/isa_protocol_context.js';
 import { map as map$1 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
-import { object, string, list } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
+import { object, list as list$1, string } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 import { Option_fromValueWithDefault } from '../../Core/Helper/Collections.js';
 import { Decode_uri } from '../Decode.js';
-import { decoder, encoder } from './ProtocolParameter.js';
+import { ISAJson_encoder as ISAJson_encoder$1, ISAJson_decoder as ISAJson_decoder$1 } from './ProtocolParameter.js';
 import { encode } from '../IDTable.js';
 
 function ROCrate_genID(studyName, assayName, processName, p) {
@@ -89,7 +89,7 @@ function ROCrate_encoder(studyName, assayName, processName, oa) {
     Encode(helpers) {
       return helpers.encodeString(value);
     }
-  })], ["@type", list$1(singleton({
+  })], ["@type", list(singleton({
     Encode(helpers_1) {
       return helpers_1.encodeString("Protocol");
     }
@@ -119,8 +119,8 @@ function ROCrate_encoder(studyName, assayName, processName, oa) {
 }
 const ROCrate_decoder = object((get$) => {
   let list_3, list_1, arg_1, objectArg, arg_3, objectArg_1, arg_5, objectArg_2, objectArg_3, objectArg_4, objectArg_5, objectArg_6, objectArg_7, objectArg_8, arg_19, objectArg_9;
-  const components = Option_fromValueWithDefault(empty(), (list_3 = (list_1 = defaultArg((arg_1 = list(ROCrate_decoder$1), objectArg = get$.Optional, objectArg.Field("components", arg_1)), empty()), append(defaultArg((arg_3 = list(ROCrate_decoder$1), objectArg_1 = get$.Optional, objectArg_1.Field("reagents", arg_3)), empty()), list_1)), append(defaultArg((arg_5 = list(ROCrate_decoder$1), objectArg_2 = get$.Optional, objectArg_2.Field("computationalTools", arg_5)), empty()), list_3)));
-  return new Protocol((objectArg_3 = get$.Optional, objectArg_3.Field("@id", Decode_uri)), (objectArg_4 = get$.Optional, objectArg_4.Field("name", string)), (objectArg_5 = get$.Optional, objectArg_5.Field("protocolType", OntologyAnnotation_ROCrate_decoderDefinedTerm)), (objectArg_6 = get$.Optional, objectArg_6.Field("description", string)), (objectArg_7 = get$.Optional, objectArg_7.Field("uri", Decode_uri)), (objectArg_8 = get$.Optional, objectArg_8.Field("version", string)), void 0, components, (arg_19 = list(ROCrate_decoder$2), objectArg_9 = get$.Optional, objectArg_9.Field("comments", arg_19)));
+  const components = Option_fromValueWithDefault(empty(), (list_3 = (list_1 = defaultArg((arg_1 = list$1(ROCrate_decoder$1), objectArg = get$.Optional, objectArg.Field("components", arg_1)), empty()), append(defaultArg((arg_3 = list$1(ROCrate_decoder$1), objectArg_1 = get$.Optional, objectArg_1.Field("reagents", arg_3)), empty()), list_1)), append(defaultArg((arg_5 = list$1(ROCrate_decoder$1), objectArg_2 = get$.Optional, objectArg_2.Field("computationalTools", arg_5)), empty()), list_3)));
+  return new Protocol((objectArg_3 = get$.Optional, objectArg_3.Field("@id", Decode_uri)), (objectArg_4 = get$.Optional, objectArg_4.Field("name", string)), (objectArg_5 = get$.Optional, objectArg_5.Field("protocolType", OntologyAnnotation_ROCrate_decoderDefinedTerm)), (objectArg_6 = get$.Optional, objectArg_6.Field("description", string)), (objectArg_7 = get$.Optional, objectArg_7.Field("uri", Decode_uri)), (objectArg_8 = get$.Optional, objectArg_8.Field("version", string)), void 0, components, (arg_19 = list$1(ROCrate_decoder$2), objectArg_9 = get$.Optional, objectArg_9.Field("comments", arg_19)));
 });
 function ISAJson_encoder(studyName, assayName, processName, idMap, oa) {
   const f = (oa_1) => {
@@ -144,7 +144,7 @@ function ISAJson_encoder(studyName, assayName, processName, idMap, oa) {
       Encode(helpers_4) {
         return helpers_4.encodeString(value_8);
       }
-    }), oa_1.Version), tryIncludeListOpt("parameters", (value_10) => encoder(idMap, value_10), oa_1.Parameters), tryIncludeListOpt("components", (c) => ISAJson_encoder$1(idMap, c), oa_1.Components), tryIncludeListOpt("comments", (comment) => ISAJson_encoder$2(idMap, comment), oa_1.Comments)]));
+    }), oa_1.Version), tryIncludeListOpt("parameters", (value_10) => ISAJson_encoder$1(idMap, value_10), oa_1.Parameters), tryIncludeListOpt("components", (c) => ISAJson_encoder$2(idMap, c), oa_1.Components), tryIncludeListOpt("comments", (comment) => ISAJson_encoder$3(idMap, comment), oa_1.Comments)]));
     return {
       Encode(helpers_5) {
         const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_5)], values_1);
@@ -160,7 +160,7 @@ function ISAJson_encoder(studyName, assayName, processName, idMap, oa) {
 }
 const ISAJson_decoder = object((get$) => {
   let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8;
-  return new Protocol((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("name", string)), (objectArg_2 = get$.Optional, objectArg_2.Field("protocolType", OntologyAnnotation_ISAJson_decoder)), (objectArg_3 = get$.Optional, objectArg_3.Field("description", string)), (objectArg_4 = get$.Optional, objectArg_4.Field("uri", Decode_uri)), (objectArg_5 = get$.Optional, objectArg_5.Field("version", string)), (arg_13 = list(decoder), objectArg_6 = get$.Optional, objectArg_6.Field("parameters", arg_13)), (arg_15 = list(ISAJson_decoder$1), objectArg_7 = get$.Optional, objectArg_7.Field("components", arg_15)), (arg_17 = list(ISAJson_decoder$2), objectArg_8 = get$.Optional, objectArg_8.Field("comments", arg_17)));
+  return new Protocol((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("name", string)), (objectArg_2 = get$.Optional, objectArg_2.Field("protocolType", OntologyAnnotation_ISAJson_decoder)), (objectArg_3 = get$.Optional, objectArg_3.Field("description", string)), (objectArg_4 = get$.Optional, objectArg_4.Field("uri", Decode_uri)), (objectArg_5 = get$.Optional, objectArg_5.Field("version", string)), (arg_13 = list$1(ISAJson_decoder$1), objectArg_6 = get$.Optional, objectArg_6.Field("parameters", arg_13)), (arg_15 = list$1(ISAJson_decoder$2), objectArg_7 = get$.Optional, objectArg_7.Field("components", arg_15)), (arg_17 = list$1(ISAJson_decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("comments", arg_17)));
 });
 
 export { ISAJson_decoder, ISAJson_encoder, ROCrate_decoder, ROCrate_encoder, ROCrate_genID };

package/dist/ts/ts/Json/Process/ProtocolParameter.d.ts

@@ -2,7 +2,9 @@ import { Option } from '@fable-org/fable-library-js/Option.js';
 import { ProtocolParameter } from '../../Core/Process/ProtocolParameter.js';
 import { Decoder$1, IEncodable } from '../../fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js';
 import { IMap } from '@fable-org/fable-library-js/Util.js';
-export declare function genID(p: ProtocolParameter): string;
-export declare function encoder(idMap: Option<IMap<string, IEncodable>>, value: ProtocolParameter): IEncodable;
+export declare function encoder(value: ProtocolParameter): IEncodable;
 export declare const decoder: Decoder$1<ProtocolParameter>;
+export declare function ISAJson_genID(p: ProtocolParameter): string;
+export declare function ISAJson_encoder(idMap: Option<IMap<string, IEncodable>>, value: ProtocolParameter): IEncodable;
+export declare const ISAJson_decoder: Decoder$1<ProtocolParameter>;
 //# sourceMappingURL=ProtocolParameter.d.ts.map

package/dist/ts/ts/Json/Process/ProtocolParameter.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"ProtocolParameter.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Json/Process/ProtocolParameter.ts"],"names":[],"mappings":"AAAA,OAAO,EAAyB,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAGtF,OAAO,EAAE,iBAAiB,EAAE,MAAM,yCAAyC,CAAC;AAE5E,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,uDAAuD,CAAC;AAIjH,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAG3D,wBAAgB,KAAK,CAAC,CAAC,EAAE,iBAAiB,GAAG,MAAM,CAQlD;AAED,wBAAgB,OAAO,CAAC,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC,EAAE,KAAK,EAAE,iBAAiB,GAAG,UAAU,CAoBrG;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,iBAAiB,CAG/C,CAAC"}
+{"version":3,"file":"ProtocolParameter.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Json/Process/ProtocolParameter.ts"],"names":[],"mappings":"AACA,OAAO,EAA0C,MAAM,EAAc,MAAM,uCAAuC,CAAC;AAEnH,OAAO,EAAE,iBAAiB,EAAE,MAAM,yCAAyC,CAAC;AAC5E,OAAO,EAAqB,SAAS,EAAE,UAAU,EAAE,MAAM,uDAAuD,CAAC;AAOjH,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAE3D,wBAAgB,OAAO,CAAC,KAAK,EAAE,iBAAiB,GAAG,UAAU,CAE5D;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,iBAAiB,CAGnB,CAAC;AAE/B,wBAAgB,aAAa,CAAC,CAAC,EAAE,iBAAiB,GAAG,MAAM,CAQ1D;AAED,wBAAgB,eAAe,CAAC,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC,EAAE,KAAK,EAAE,iBAAiB,GAAG,UAAU,CAoB7G;AAED,eAAO,MAAM,eAAe,EAAE,SAAS,CAAC,iBAAiB,CAGvD,CAAC"}

package/dist/ts/ts/Json/Process/ProtocolParameter.js

@@ -1,13 +1,22 @@
-import { value, map } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
-import { OntologyAnnotation_ISAJson_decoder, OntologyAnnotation_ISAJson_encoder, OntologyAnnotation_ROCrate_genID } from '../OntologyAnnotation.js';
+import { OntologyAnnotation_encoder, OntologyAnnotation_decoder, OntologyAnnotation_ROCrate_genID, OntologyAnnotation_ISAJson_encoder, OntologyAnnotation_ISAJson_decoder } from '../OntologyAnnotation.js';
+import { defaultArg, unwrap, value, map as map$1 } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
+import { OntologyAnnotation } from '../../Core/OntologyAnnotation.js';
 import { ProtocolParameter } from '../../Core/Process/ProtocolParameter.js';
+import { map, object } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
+import { Option_fromValueWithDefault } from '../../Core/Helper/Collections.js';
 import { choose, ofArray } from '../../../node_modules/@fable-org/fable-library-js/List.js';
 import { tryInclude } from '../Encode.js';
-import { map as map$1 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { map as map$2 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { encode } from '../IDTable.js';
-import { object } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 
-function genID(p) {
+function encoder(value) {
+  return OntologyAnnotation_encoder(defaultArg(value.ParameterName, new OntologyAnnotation()));
+}
+const decoder = map((oa) => {
+  const oa_1 = Option_fromValueWithDefault(new OntologyAnnotation(), oa);
+  return ProtocolParameter.create(void 0, unwrap(oa_1));
+}, OntologyAnnotation_decoder);
+function ISAJson_genID(p) {
   const matchValue = p.ParameterName;
   if (matchValue == null) {
     return "#EmptyProtocolParameter";
@@ -15,29 +24,29 @@ function genID(p) {
     return `#ProtocolParameter/${OntologyAnnotation_ROCrate_genID(value(matchValue))}`;
   }
 }
-function encoder(idMap, value$1) {
+function ISAJson_encoder(idMap, value$1) {
   const f = (value_1) => {
-    const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([tryInclude("@id", (value_2) => ({
+    const values_1 = choose((tupledArg) => map$1((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([tryInclude("@id", (value_2) => ({
       Encode(helpers) {
         return helpers.encodeString(value_2);
       }
-    }), genID(value_1)), tryInclude("parameterName", (oa) => OntologyAnnotation_ISAJson_encoder(idMap, oa), value_1.ParameterName)]));
+    }), ISAJson_genID(value_1)), tryInclude("parameterName", (oa) => OntologyAnnotation_ISAJson_encoder(idMap, oa), value_1.ParameterName)]));
     return {
       Encode(helpers_1) {
-        const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_1)], values_1);
+        const arg = map$2((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_1)], values_1);
         return helpers_1.encodeObject(arg);
       }
     };
   };
   if (idMap != null) {
-    return encode(genID, f, value$1, value(idMap));
+    return encode(ISAJson_genID, f, value$1, value(idMap));
   } else {
     return f(value$1);
   }
 }
-const decoder = object((get$) => {
+const ISAJson_decoder = object((get$) => {
   let objectArg;
   return new ProtocolParameter(void 0, (objectArg = get$.Optional, objectArg.Field("parameterName", OntologyAnnotation_ISAJson_decoder)));
 });
 
-export { decoder, encoder, genID };
+export { ISAJson_decoder, ISAJson_encoder, ISAJson_genID, decoder, encoder };

package/dist/ts/ts/Json/Process/Sample.js

@@ -1,18 +1,18 @@
 import { value, defaultArg, map as map$1 } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
 import { replace } from '../../../node_modules/@fable-org/fable-library-js/String.js';
 import { Sample } from '../../Core/Process/Sample.js';
-import { ofArray, isEmpty, head, tail, choose, empty, map, append, singleton } from '../../../node_modules/@fable-org/fable-library-js/List.js';
-import { ISAJson_decoder as ISAJson_decoder$1, ROCrate_decoder as ROCrate_decoder$3, ROCrate_encoder as ROCrate_encoder$1, ISAJson_encoder as ISAJson_encoder$1 } from './MaterialAttributeValue.js';
-import { ISAJson_decoder as ISAJson_decoder$2, ROCrate_decoder as ROCrate_decoder$2, ROCrate_encoder as ROCrate_encoder$2, ISAJson_encoder as ISAJson_encoder$2 } from './FactorValue.js';
-import { list as list$1 } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
+import { map, empty, append, choose, ofArray, singleton, isEmpty, head, tail } from '../../../node_modules/@fable-org/fable-library-js/List.js';
+import { ROCrate_encoder as ROCrate_encoder$1, ROCrate_decoder as ROCrate_decoder$2, ISAJson_encoder as ISAJson_encoder$1, ISAJson_decoder as ISAJson_decoder$1 } from './MaterialAttributeValue.js';
+import { ROCrate_encoder as ROCrate_encoder$2, ROCrate_decoder as ROCrate_decoder$1, ISAJson_encoder as ISAJson_encoder$2, ISAJson_decoder as ISAJson_decoder$2 } from './FactorValue.js';
+import { list } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
 import { tryInclude, tryIncludeList, tryIncludeListOpt } from '../Encode.js';
 import { context_jsonvalue } from '../context/rocrate/isa_sample_context.js';
 import { map as map$2 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
-import { string, list, object, unit } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
+import { string, object, unit, list as list$1 } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 import { FSharpResult$2_Error, FSharpResult$2_Ok } from '../../../node_modules/@fable-org/fable-library-js/Result.js';
-import { Decode_objectNoAdditionalProperties, Decode_uri } from '../Decode.js';
+import { Decode_uri, Decode_objectNoAdditionalProperties } from '../Decode.js';
 import { Option_fromValueWithDefault } from '../../Core/Helper/Collections.js';
-import { ISAJson_decoder as ISAJson_decoder$3, ROCrate_decoder as ROCrate_decoder$1, ISAJson_encoder as ISAJson_encoder$3 } from './Source.js';
+import { ROCrate_decoder as ROCrate_decoder$3, ISAJson_encoder as ISAJson_encoder$3, ISAJson_decoder as ISAJson_decoder$3 } from './Source.js';
 import { encode } from '../IDTable.js';
 
 function ROCrate_genID(s) {
@@ -37,7 +37,7 @@ function ROCrate_encoder(oa) {
     Encode(helpers) {
       return helpers.encodeString(value_2);
     }
-  })], ["@type", list$1(singleton({
+  })], ["@type", list(singleton({
     Encode(helpers_1) {
       return helpers_1.encodeString("Sample");
     }
@@ -62,11 +62,11 @@ const ROCrate_additionalPropertyDecoder = {
     let matchValue;
     if ((s.hasProperty("additionalType", json) ? (matchValue = string.Decode(s, s.getProperty("additionalType", json)), matchValue.tag === /* Ok */
     0 ? matchValue.fields[0] : "") : "") === "FactorValue") {
-      const matchValue_1 = ROCrate_decoder$2.Decode(s, json);
+      const matchValue_1 = ROCrate_decoder$1.Decode(s, json);
       return matchValue_1.tag === /* Error */
       1 ? FSharpResult$2_Error(matchValue_1.fields[0]) : FSharpResult$2_Ok([void 0, matchValue_1.fields[0]]);
     } else {
-      const matchValue_2 = ROCrate_decoder$3.Decode(s, json);
+      const matchValue_2 = ROCrate_decoder$2.Decode(s, json);
       return matchValue_2.tag === /* Error */
       1 ? FSharpResult$2_Error(matchValue_2.fields[0]) : FSharpResult$2_Ok([matchValue_2.fields[0], void 0]);
     }
@@ -93,7 +93,7 @@ const ROCrate_decoder = object((get$) => {
     }
   }
   let matchValue_1;
-  const arg_5 = list(string);
+  const arg_5 = list$1(string);
   const objectArg_2 = get$.Optional;
   matchValue_1 = objectArg_2.Field("@type", arg_5);
   let matchResult_1;
@@ -120,7 +120,7 @@ const ROCrate_decoder = object((get$) => {
     }
   }
   let additionalProperties;
-  const arg_9 = list(ROCrate_additionalPropertyDecoder);
+  const arg_9 = list$1(ROCrate_additionalPropertyDecoder);
   const objectArg_4 = get$.Optional;
   additionalProperties = objectArg_4.Field("additionalProperties", arg_9);
   let patternInput;
@@ -130,7 +130,7 @@ const ROCrate_decoder = object((get$) => {
   } else {
     patternInput = [void 0, void 0];
   }
-  return new Sample((objectArg_5 = get$.Optional, objectArg_5.Field("@id", Decode_uri)), (objectArg_6 = get$.Optional, objectArg_6.Field("name", string)), patternInput[0], patternInput[1], (arg_15 = list(ROCrate_decoder$1), objectArg_7 = get$.Optional, objectArg_7.Field("derivesFrom", arg_15)));
+  return new Sample((objectArg_5 = get$.Optional, objectArg_5.Field("@id", Decode_uri)), (objectArg_6 = get$.Optional, objectArg_6.Field("name", string)), patternInput[0], patternInput[1], (arg_15 = list$1(ROCrate_decoder$3), objectArg_7 = get$.Optional, objectArg_7.Field("derivesFrom", arg_15)));
 });
 function ISAJson_encoder(idMap, oa) {
   const f = (oa_1) => {
@@ -159,7 +159,7 @@ function ISAJson_encoder(idMap, oa) {
 const ISAJson_allowedFields = ofArray(["@id", "name", "characteristics", "factorValues", "derivesFrom", "@type", "@context"]);
 const ISAJson_decoder = Decode_objectNoAdditionalProperties(ISAJson_allowedFields, (get$) => {
   let objectArg, objectArg_1, arg_5, objectArg_2, arg_7, objectArg_3, arg_9, objectArg_4;
-  return new Sample((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("name", string)), (arg_5 = list(ISAJson_decoder$1), objectArg_2 = get$.Optional, objectArg_2.Field("characteristics", arg_5)), (arg_7 = list(ISAJson_decoder$2), objectArg_3 = get$.Optional, objectArg_3.Field("factorValues", arg_7)), (arg_9 = list(ISAJson_decoder$3), objectArg_4 = get$.Optional, objectArg_4.Field("derivesFrom", arg_9)));
+  return new Sample((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("name", string)), (arg_5 = list$1(ISAJson_decoder$1), objectArg_2 = get$.Optional, objectArg_2.Field("characteristics", arg_5)), (arg_7 = list$1(ISAJson_decoder$2), objectArg_3 = get$.Optional, objectArg_3.Field("factorValues", arg_7)), (arg_9 = list$1(ISAJson_decoder$3), objectArg_4 = get$.Optional, objectArg_4.Field("derivesFrom", arg_9)));
 });
 
 export { ISAJson_allowedFields, ISAJson_decoder, ISAJson_encoder, ROCrate_additionalPropertyDecoder, ROCrate_decoder, ROCrate_encoder, ROCrate_genID };

package/dist/ts/ts/Json/Process/Source.js

@@ -2,14 +2,14 @@ import { value, map } from '../../../node_modules/@fable-org/fable-library-js/Op
 import { replace } from '../../../node_modules/@fable-org/fable-library-js/String.js';
 import { URIModule_toString } from '../../Core/URI.js';
 import { Source } from '../../Core/Process/Source.js';
-import { ofArray, isEmpty, head, tail, choose, singleton } from '../../../node_modules/@fable-org/fable-library-js/List.js';
-import { list as list$1 } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
+import { choose, ofArray, singleton, isEmpty, head, tail } from '../../../node_modules/@fable-org/fable-library-js/List.js';
+import { list } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
 import { tryInclude, tryIncludeListOpt } from '../Encode.js';
-import { ISAJson_decoder as ISAJson_decoder$1, ROCrate_decoder as ROCrate_decoder$1, ROCrate_encoder as ROCrate_encoder$1, ISAJson_encoder as ISAJson_encoder$1 } from './MaterialAttributeValue.js';
+import { ROCrate_encoder as ROCrate_encoder$1, ROCrate_decoder as ROCrate_decoder$1, ISAJson_encoder as ISAJson_encoder$1, ISAJson_decoder as ISAJson_decoder$1 } from './MaterialAttributeValue.js';
 import { context_jsonvalue } from '../context/rocrate/isa_source_context.js';
 import { map as map$1 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
-import { string, list, object, unit } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
-import { Decode_objectNoAdditionalProperties, Decode_uri } from '../Decode.js';
+import { object, unit, list as list$1, string } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
+import { Decode_uri, Decode_objectNoAdditionalProperties } from '../Decode.js';
 import { encode } from '../IDTable.js';
 
 function ROCrate_genID(s) {
@@ -31,7 +31,7 @@ function ROCrate_encoder(oa) {
     Encode(helpers) {
       return helpers.encodeString(value);
     }
-  })], ["@type", list$1(singleton({
+  })], ["@type", list(singleton({
     Encode(helpers_1) {
       return helpers_1.encodeString("Source");
     }
@@ -72,7 +72,7 @@ const ROCrate_decoder = object((get$) => {
     }
   }
   let matchValue_1;
-  const arg_5 = list(string);
+  const arg_5 = list$1(string);
   const objectArg_2 = get$.Optional;
   matchValue_1 = objectArg_2.Field("@type", arg_5);
   let matchResult_1;
@@ -98,7 +98,7 @@ const ROCrate_decoder = object((get$) => {
       break;
     }
   }
-  return new Source((objectArg_4 = get$.Optional, objectArg_4.Field("@id", Decode_uri)), (objectArg_5 = get$.Optional, objectArg_5.Field("name", string)), (arg_13 = list(ROCrate_decoder$1), objectArg_6 = get$.Optional, objectArg_6.Field("characteristics", arg_13)));
+  return new Source((objectArg_4 = get$.Optional, objectArg_4.Field("@id", Decode_uri)), (objectArg_5 = get$.Optional, objectArg_5.Field("name", string)), (arg_13 = list$1(ROCrate_decoder$1), objectArg_6 = get$.Optional, objectArg_6.Field("characteristics", arg_13)));
 });
 function ISAJson_encoder(idMap, oa) {
   const f = (oa_1) => {
@@ -127,7 +127,7 @@ function ISAJson_encoder(idMap, oa) {
 const ISAJson_allowedFields = ofArray(["@id", "name", "characteristics", "@type", "@context"]);
 const ISAJson_decoder = Decode_objectNoAdditionalProperties(ISAJson_allowedFields, (get$) => {
   let objectArg, objectArg_1, arg_5, objectArg_2;
-  return new Source((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("name", string)), (arg_5 = list(ISAJson_decoder$1), objectArg_2 = get$.Optional, objectArg_2.Field("characteristics", arg_5)));
+  return new Source((objectArg = get$.Optional, objectArg.Field("@id", Decode_uri)), (objectArg_1 = get$.Optional, objectArg_1.Field("name", string)), (arg_5 = list$1(ISAJson_decoder$1), objectArg_2 = get$.Optional, objectArg_2.Field("characteristics", arg_5)));
 });
 
 export { ISAJson_allowedFields, ISAJson_decoder, ISAJson_encoder, ROCrate_decoder, ROCrate_encoder, ROCrate_genID };

package/dist/ts/ts/Json/Process/Value.js

@@ -1,4 +1,4 @@
-import { OntologyAnnotation_ISAJson_decoder, OntologyAnnotation_ISAJson_encoder } from '../OntologyAnnotation.js';
+import { OntologyAnnotation_ISAJson_encoder, OntologyAnnotation_ISAJson_decoder } from '../OntologyAnnotation.js';
 import { Value_Int, Value_Float, Value_Ontology, Value_Name } from '../../Core/Value.js';
 import { oneOf, map, int, float, string } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 import { ofArray } from '../../../node_modules/@fable-org/fable-library-js/List.js';

package/dist/ts/ts/Json/PropertyValue.js

@@ -1,4 +1,4 @@
-import { value, unwrap, map } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { value, map, unwrap } from '../../node_modules/@fable-org/fable-library-js/Option.js';
 import { OntologyAnnotation } from '../Core/OntologyAnnotation.js';
 import { Value } from '../Core/Value.js';
 import { choose, ofArray } from '../../node_modules/@fable-org/fable-library-js/List.js';

package/dist/ts/ts/Json/Publication.js

@@ -1,14 +1,14 @@
-import { ofArray, choose } from '../../node_modules/@fable-org/fable-library-js/List.js';
-import { unwrap, map, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { choose, ofArray } from '../../node_modules/@fable-org/fable-library-js/List.js';
+import { map, unwrap, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
 import { tryInclude, tryIncludeSeq } from './Encode.js';
-import { OntologyAnnotation_decoder, OntologyAnnotation_ROCrate_decoderDefinedTerm, OntologyAnnotation_encoder, OntologyAnnotation_ROCrate_encoderDefinedTerm } from './OntologyAnnotation.js';
-import { decoder as decoder$1, ROCrate_decoderDisambiguatingDescription, encoder as encoder$1, ROCrate_encoderDisambiguatingDescription, ISAJson_encoder as ISAJson_encoder$1 } from './Comment.js';
+import { OntologyAnnotation_encoder, OntologyAnnotation_decoder, OntologyAnnotation_ROCrate_encoderDefinedTerm, OntologyAnnotation_ROCrate_decoderDefinedTerm } from './OntologyAnnotation.js';
+import { encoder as encoder$1, decoder as decoder$1, ROCrate_encoderDisambiguatingDescription, ROCrate_decoderDisambiguatingDescription, ISAJson_encoder as ISAJson_encoder$1 } from './Comment.js';
 import { map as map$1 } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { Publication } from '../Core/Publication.js';
 import { object, string, resizeArray } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
-import { Decode_noAdditionalProperties, Decode_uri } from './Decode.js';
+import { Decode_uri, Decode_noAdditionalProperties } from './Decode.js';
 import { replace } from '../../node_modules/@fable-org/fable-library-js/String.js';
-import { ROCrate_decodeAuthorListString, ROCrate_encodeAuthorListString } from './Person.js';
+import { ROCrate_encodeAuthorListString, ROCrate_decodeAuthorListString } from './Person.js';
 import { context_jsonvalue } from './context/rocrate/isa_publication_context.js';
 
 function encoder(oa) {

package/dist/ts/ts/Json/ROCrate/LDContext.js

@@ -109,6 +109,7 @@ function encoder(ctx_mut) {
           }
         }
       }
+      break;
     }
 }
 

package/dist/ts/ts/Json/ROCrate/LDGraph.js

@@ -1,10 +1,10 @@
 import { choose, isEmpty, length, head } from '../../../node_modules/@fable-org/fable-library-js/List.js';
 import { map, unwrap } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
 import { ErrorReason$1_BadOneOf, ErrorReason$1_BadPrimitive } from '../../fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js';
-import { toList, delay, map as map$1, append, singleton, collect, empty } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { toList, delay, append, singleton, collect, empty, map as map$1 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { tryInclude } from '../Encode.js';
-import { decoder as decoder$1, encoder as encoder$1 } from './LDContext.js';
-import { genericDecoder, decoder as decoder$2, genericEncoder, encoder as encoder$2 } from './LDNode.js';
+import { encoder as encoder$1, decoder as decoder$1 } from './LDContext.js';
+import { genericEncoder, encoder as encoder$2, decoder as decoder$2, genericDecoder } from './LDNode.js';
 import { seq } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
 import { LDGraph } from '../../ROCrate/LDObject.js';
 import { Getters$2_$ctor_Z4BE6C149, string, resizeArray, Getters$2__get_Errors } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';