@nfdi4plants/arctrl 3.0.0-beta.4 → 3.0.0-beta.6

package/dist/ts/ts/Core/Value.js

@@ -1,10 +1,11 @@
 import { tryParse } from '../../node_modules/@fable-org/fable-library-js/Int32.js';
 import { Union, FSharpRef, toString } from '../../node_modules/@fable-org/fable-library-js/Types.js';
 import { tryParse as tryParse$1 } from '../../node_modules/@fable-org/fable-library-js/Double.js';
-import { OntologyAnnotation } from './OntologyAnnotation.js';
+import { OntologyAnnotation, OntologyAnnotation_$reflection } from './OntologyAnnotation.js';
 import { defaultArg, unwrap, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
 import { int32ToString } from '../../node_modules/@fable-org/fable-library-js/Util.js';
 import { toText, printf } from '../../node_modules/@fable-org/fable-library-js/String.js';
+import { union_type, int32_type, float64_type, string_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
 
 function Value_Ontology(Item) {
   return new Value(0, [Item]);
@@ -127,7 +128,7 @@ class Value extends Union {
     const this$ = this;
     if (this$.tag === /* Ontology */
     0) {
-      this$.fields[0];
+      const oa = this$.fields[0];
       return true;
     } else {
       return false;
@@ -190,5 +191,8 @@ class Value extends Union {
     }
   }
 }
+function Value_$reflection() {
+  return union_type("ARCtrl.Value", [], Value, () => [[["Item", OntologyAnnotation_$reflection()]], [["Item", int32_type]], [["Item", float64_type]], [["Item", string_type]]]);
+}
 
-export { Value, Value_Float, Value_Int, Value_Name, Value_Ontology };
+export { Value, Value_$reflection, Value_Float, Value_Int, Value_Name, Value_Ontology };

package/dist/ts/ts/CrossAsync.js

@@ -2,6 +2,9 @@ import { PromiseBuilder__Run_212F1D4B, PromiseBuilder__Delay_62FBFDE1 } from './
 import { promise } from './fable_modules/Fable.Promise.3.2.0/PromiseImpl.fs.js';
 import { append } from '../node_modules/@fable-org/fable-library-js/Array.js';
 import { getEnumerator } from '../node_modules/@fable-org/fable-library-js/Util.js';
+import { awaitPromise } from '../node_modules/@fable-org/fable-library-js/Async.js';
+import { FSharpResult$2_Ok, FSharpResult$2_Error } from '../node_modules/@fable-org/fable-library-js/Result.js';
+import { toString } from '../node_modules/@fable-org/fable-library-js/Types.js';
 
 function startSequential(starterF, tasks) {
   const loop = (en) => PromiseBuilder__Run_212F1D4B(promise, PromiseBuilder__Delay_62FBFDE1(promise, () => en["System.Collections.IEnumerator.MoveNext"]() ? starterF(en["System.Collections.Generic.IEnumerator`1.get_Current"]()).then((_arg) => loop(en).then((_arg_1) => Promise.resolve(append([_arg], _arg_1)))) : Promise.resolve([])));
@@ -13,8 +16,15 @@ function all(tasks) {
 function map(f, v) {
   return PromiseBuilder__Run_212F1D4B(promise, PromiseBuilder__Delay_62FBFDE1(promise, () => v.then((_arg) => Promise.resolve(f(_arg)))));
 }
+function asAsync(v) {
+  return awaitPromise(v);
+}
 function catchWith(f, p) {
   return p.catch(f);
 }
+function catchAsResult(p) {
+  const pr_1 = p.then(FSharpResult$2_Ok);
+  return pr_1.catch((e) => FSharpResult$2_Error(toString(e)));
+}
 
-export { all, catchWith, map, startSequential };
+export { all, asAsync, catchAsResult, catchWith, map, startSequential };

package/dist/ts/ts/FileSystem/Commit.js

@@ -0,0 +1,18 @@
+import { Record } from '../../node_modules/@fable-org/fable-library-js/Types.js';
+import { record_type, string_type, class_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
+
+class Commit extends Record {
+  constructor(Hash, UserName, UserEmail, Date$, Message) {
+    super();
+    this.Hash = Hash;
+    this.UserName = UserName;
+    this.UserEmail = UserEmail;
+    this.Date = Date$;
+    this.Message = Message;
+  }
+}
+function Commit_$reflection() {
+  return record_type("ARCtrl.FileSystem.Commit", [], Commit, () => [["Hash", string_type], ["UserName", string_type], ["UserEmail", string_type], ["Date", class_type("System.DateTime")], ["Message", string_type]]);
+}
+
+export { Commit, Commit_$reflection };

package/dist/ts/ts/FileSystem/FileSystem.js

@@ -1,7 +1,9 @@
 import { defaultArg } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { Record } from '../../node_modules/@fable-org/fable-library-js/Types.js';
-import { FileSystemTree } from './FileSystemTree.js';
+import { Commit_$reflection } from './Commit.js';
+import { FileSystemTree, FileSystemTree_$reflection } from './FileSystemTree.js';
 import { append, map } from '../../node_modules/@fable-org/fable-library-js/Array.js';
+import { Record } from '../../node_modules/@fable-org/fable-library-js/Types.js';
+import { record_type, array_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
 
 class FileSystem extends Record {
   constructor(Tree, History) {
@@ -44,5 +46,8 @@ class FileSystem extends Record {
     });
   }
 }
+function FileSystem_$reflection() {
+  return record_type("ARCtrl.FileSystem.FileSystem", [], FileSystem, () => [["Tree", FileSystemTree_$reflection()], ["History", array_type(Commit_$reflection())]]);
+}
 
-export { FileSystem };
+export { FileSystem, FileSystem_$reflection };

package/dist/ts/ts/FileSystem/FileSystemTree.d.ts

@@ -46,6 +46,7 @@ export declare class FileSystemTree<Tag extends keyof FileSystemTree_$cases> ext
     static createWorkflowFolder(workflowName: string, hasDataMap?: boolean): FileSystemTree_$union;
     static createRunFolder(runName: string, hasDataMap?: boolean): FileSystemTree_$union;
     static createInvestigationFile(): FileSystemTree_$union;
+    static createLicenseFile(): FileSystemTree_$union;
     static createAssaysFolder(assays: FileSystemTree_$union[]): FileSystemTree_$union;
     static createStudiesFolder(studies: FileSystemTree_$union[]): FileSystemTree_$union;
     static createWorkflowsFolder(workflows: FileSystemTree_$union[]): FileSystemTree_$union;

package/dist/ts/ts/FileSystem/FileSystemTree.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"FileSystemTree.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/FileSystem/FileSystemTree.ts"],"names":[],"mappings":"AAAA,OAAO,EAAU,MAAM,EAAc,MAAM,uCAAuC,CAAC;AAQnF,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAuC,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAE1G,MAAM,MAAM,qBAAqB,GAC3B,cAAc,CAAC,CAAC,CAAC,GACjB,cAAc,CAAC,CAAC,CAAC,CAAA;AAEvB,MAAM,MAAM,qBAAqB,GAAG;IAChC,CAAC,EAAE,CAAC,MAAM,EAAE,CAAC,MAAM,CAAC,CAAC,CAAC;IACtB,CAAC,EAAE,CAAC,QAAQ,EAAE,CAAC,MAAM,EAAE,qBAAqB,EAAE,CAAC,CAAC,CAAA;CACnD,CAAA;AAED,wBAAgB,mBAAmB,CAAC,IAAI,EAAE,MAAM,qBAE/C;AAED,wBAAgB,qBAAqB,CAAC,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,qBAAqB,EAAE,qBAEpF;AAED,qBAAa,cAAc,CAAC,GAAG,SAAS,MAAM,qBAAqB,CAAE,SAAQ,KAAK,CAAC,GAAG,EAAE,qBAAqB,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;IACtG,QAAQ,CAAC,GAAG,EAAE,GAAG;IAAE,QAAQ,CAAC,MAAM,EAAE,qBAAqB,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;gBAAxD,GAAG,EAAE,GAAG,EAAW,MAAM,EAAE,qBAAqB,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;IAG7E,KAAK;IAGL,IAAI,IAAI,IAAI,MAAM,CAUjB;IACD,IAAI,QAAQ,IAAI,OAAO,CAGtB;IACD,IAAI,MAAM,IAAI,OAAO,CAGpB;IACD,MAAM,KAAK,SAAS,IAAI,MAAM,CAE7B;IACD,MAAM,CAAC,UAAU,CAAC,IAAI,EAAE,MAAM,GAAG,qBAAqB;IAGtD,MAAM,CAAC,YAAY,CAAC,IAAI,EAAE,MAAM,EAAE,QAAQ,CAAC,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAG5F,MAAM,CAAC,gBAAgB,CAAC,QAAQ,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAGjF,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAAC,qBAAqB,CAAC;IAI9D,MAAM,CAAC,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAGxG,qBAAqB,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO;IAU5C,MAAM,CAAC,qBAAqB,CAAC,IAAI,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,OAAO,CAAC;IAGtF,UAAU,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAAC,qBAAqB,CAAC;IAmCvD,OAAO,CAAC,IAAI,EAAE,MAAM,GAAG,qBAAqB;IAM5C,MAAM,CAAC,OAAO,CAAC,IAAI,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,qBAAqB,CAAC;IAGtF,MAAM,CAAC,aAAa,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,qBAAqB;IA0B5D,WAAW,CAAC,UAAU,CAAC,EAAE,OAAO,GAAG,MAAM,EAAE;IAgC3C,MAAM,CAAC,WAAW,CAAC,UAAU,CAAC,EAAE,OAAO,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,EAAE,CAAC;IAGrF,WAAW,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,MAAM,CAAC,qBAAqB,CAAC;IAkBlF,MAAM,CAAC,WAAW,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAG5H,aAAa,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,MAAM,CAAC,qBAAqB,CAAC;IAmBpF,MAAM,CAAC,aAAa,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAG9H,MAAM,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,MAAM,CAAC,qBAAqB,CAAC;IA+B7E,MAAM,CAAC,MAAM,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAGvH,KAAK,CAAC,QAAQ,EAAE,qBAAqB,GAAG,qBAAqB;IAS7D,IAAI,IAAI,qBAAqB;IAI7B,MAAM,CAAC,iBAAiB,IAAI,qBAAqB;IAGjD,MAAM,CAAC,gBAAgB,IAAI,qBAAqB;IAGhD,MAAM,CAAC,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,qBAAqB;IAG7D,MAAM,CAAC,iBAAiB,CAAC,SAAS,EAAE,MAAM,EAAE,UAAU,CAAC,EAAE,OAAO,GAAG,qBAAqB;IAcxF,MAAM,CAAC,iBAAiB,CAAC,SAAS,EAAE,MAAM,EAAE,UAAU,CAAC,EAAE,OAAO,GAAG,qBAAqB;IAcxF,MAAM,CAAC,oBAAoB,CAAC,YAAY,EAAE,MAAM,EAAE,UAAU,CAAC,EAAE,OAAO,GAAG,qBAAqB;IAY9F,MAAM,CAAC,eAAe,CAAC,OAAO,EAAE,MAAM,EAAE,UAAU,CAAC,EAAE,OAAO,GAAG,qBAAqB;IAYpF,MAAM,CAAC,uBAAuB,IAAI,qBAAqB;IAGvD,MAAM,CAAC,iBAAiB,IAAI,qBAAqB;IAGjD,MAAM,CAAC,kBAAkB,CAAC,MAAM,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAGjF,MAAM,CAAC,mBAAmB,CAAC,OAAO,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAGnF,MAAM,CAAC,qBAAqB,CAAC,SAAS,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAGvF,MAAM,CAAC,gBAAgB,CAAC,IAAI,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;CAGhF;AAED,wBAAgB,0BAA0B,IAAI,QAAQ,CAErD"}

package/dist/ts/ts/FileSystem/FileSystemTree.js

@@ -1,11 +1,12 @@
 import { defaultArg, unwrap } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { tryFind, map, append, item, tryPick, head, tail, choose, equalsWith } from '../../node_modules/@fable-org/fable-library-js/Array.js';
+import { tryFind, item, tryPick, head, tail, map, equalsWith, choose, append as append$1 } from '../../node_modules/@fable-org/fable-library-js/Array.js';
 import { split, combineMany } from './Path.js';
-import { toArray, delay, append as append$1, singleton } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
-import { Array_distinct, Array_groupBy } from '../../node_modules/@fable-org/fable-library-js/Seq2.js';
-import { curry2, arrayHash, stringHash } from '../../node_modules/@fable-org/fable-library-js/Util.js';
-import { empty, cons, toArray as toArray$1, reverse } from '../../node_modules/@fable-org/fable-library-js/List.js';
+import { toArray, delay, append, singleton } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { Array_groupBy, Array_distinct } from '../../node_modules/@fable-org/fable-library-js/Seq2.js';
+import { stringHash, arrayHash, curry2 } from '../../node_modules/@fable-org/fable-library-js/Util.js';
+import { cons, toArray as toArray$1, reverse, empty } from '../../node_modules/@fable-org/fable-library-js/List.js';
 import { Union } from '../../node_modules/@fable-org/fable-library-js/Types.js';
+import { union_type, string_type, array_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
 
 function FileSystemTree_File(name) {
   return new FileSystemTree(0, [name]);
@@ -110,7 +111,7 @@ class FileSystemTree extends Union {
   AddFile(path) {
     const this$ = this;
     const existingPaths = this$.ToFilePaths();
-    const filePaths = toArray(delay(() => append$1(singleton(path), delay(() => existingPaths))));
+    const filePaths = toArray(delay(() => append(singleton(path), delay(() => existingPaths))));
     return FileSystemTree.fromFilePaths(filePaths);
   }
   static addFile(path) {
@@ -132,7 +133,7 @@ class FileSystemTree extends Union {
       if (parent.tag === /* Folder */
       1) {
         const name_1 = parent.fields[0];
-        return FileSystemTree.createFolder(name_1, toArray(delay(() => append$1(files, delay(() => folders)))));
+        return FileSystemTree.createFolder(name_1, toArray(delay(() => append(files, delay(() => folders)))));
       } else {
         return parent;
       }
@@ -251,7 +252,7 @@ class FileSystemTree extends Union {
   Union(otherFST) {
     let array_1;
     const this$ = this;
-    const paths = Array_distinct((array_1 = this$.ToFilePaths(), append(otherFST.ToFilePaths(), array_1)), {
+    const paths = Array_distinct((array_1 = this$.ToFilePaths(), append$1(otherFST.ToFilePaths(), array_1)), {
       Equals: (x, y) => x === y,
       GetHashCode: stringHash
     });
@@ -322,18 +323,24 @@ class FileSystemTree extends Union {
   static createInvestigationFile() {
     return FileSystemTree.createFile("isa.investigation.xlsx");
   }
+  static createLicenseFile() {
+    return FileSystemTree.createFile("LICENSE");
+  }
   static createAssaysFolder(assays) {
-    return FileSystemTree.createFolder("assays", append([FileSystemTree.createGitKeepFile()], assays));
+    return FileSystemTree.createFolder("assays", append$1([FileSystemTree.createGitKeepFile()], assays));
   }
   static createStudiesFolder(studies) {
-    return FileSystemTree.createFolder("studies", append([FileSystemTree.createGitKeepFile()], studies));
+    return FileSystemTree.createFolder("studies", append$1([FileSystemTree.createGitKeepFile()], studies));
   }
   static createWorkflowsFolder(workflows) {
-    return FileSystemTree.createFolder("workflows", append([FileSystemTree.createGitKeepFile()], workflows));
+    return FileSystemTree.createFolder("workflows", append$1([FileSystemTree.createGitKeepFile()], workflows));
   }
   static createRunsFolder(runs) {
-    return FileSystemTree.createFolder("runs", append([FileSystemTree.createGitKeepFile()], runs));
+    return FileSystemTree.createFolder("runs", append$1([FileSystemTree.createGitKeepFile()], runs));
   }
 }
+function FileSystemTree_$reflection() {
+  return union_type("ARCtrl.FileSystem.FileSystemTree", [], FileSystemTree, () => [[["name", string_type]], [["name", string_type], ["children", array_type(FileSystemTree_$reflection())]]]);
+}
 
-export { FileSystemTree, FileSystemTree_File, FileSystemTree_Folder };
+export { FileSystemTree, FileSystemTree_$reflection, FileSystemTree_File, FileSystemTree_Folder };

package/dist/ts/ts/FileSystem/Path.d.ts

@@ -1,4 +1,6 @@
+import { FSharpList } from '@fable-org/fable-library-js/List.js';
 export declare const seperators: string[];
+export declare const alternativeLICENSEFileNames: FSharpList<string>;
 export declare function split(path: string): string[];
 export declare function combine(path1: string, path2: string): string;
 export declare function combineMany(paths: string[]): string;

package/dist/ts/ts/FileSystem/Path.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Path.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/FileSystem/Path.ts"],"names":[],"mappings":"AAIA,eAAO,MAAM,UAAU,EAAE,MAAM,EAAgB,CAAC;AAEhD,wBAAgB,KAAK,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,EAAE,CAU5C;AAED,wBAAgB,OAAO,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,GAAG,MAAM,CAE5D;AAED,wBAAgB,WAAW,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,MAAM,CAYnD;AAED,wBAAgB,WAAW,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAEhD;AAED;;GAEG;AACH,wBAAgB,MAAM,CAAC,QAAQ,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,GAAG,OAAO,CAE9D;AAED,wBAAgB,kBAAkB,CAAC,eAAe,EAAE,MAAM,GAAG,MAAM,CAElE;AAED,wBAAgB,kBAAkB,CAAC,eAAe,EAAE,MAAM,GAAG,MAAM,CAElE;AAED,wBAAgB,qBAAqB,CAAC,kBAAkB,EAAE,MAAM,GAAG,MAAM,CAExE;AAED,wBAAgB,gBAAgB,CAAC,aAAa,EAAE,MAAM,GAAG,MAAM,CAE9D"}
+{"version":3,"file":"Path.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/FileSystem/Path.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAK1E,eAAO,MAAM,UAAU,EAAE,MAAM,EAAgB,CAAC;AAEhD,eAAO,MAAM,2BAA2B,EAAE,UAAU,CAAC,MAAM,CAAyD,CAAC;AAErH,wBAAgB,KAAK,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,EAAE,CAU5C;AAED,wBAAgB,OAAO,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,GAAG,MAAM,CAE5D;AAED,wBAAgB,WAAW,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,MAAM,CAYnD;AAED,wBAAgB,WAAW,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAEhD;AAED;;GAEG;AACH,wBAAgB,MAAM,CAAC,QAAQ,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,GAAG,OAAO,CAE9D;AAED,wBAAgB,kBAAkB,CAAC,eAAe,EAAE,MAAM,GAAG,MAAM,CAElE;AAED,wBAAgB,kBAAkB,CAAC,eAAe,EAAE,MAAM,GAAG,MAAM,CAElE;AAED,wBAAgB,qBAAqB,CAAC,kBAAkB,EAAE,MAAM,GAAG,MAAM,CAExE;AAED,wBAAgB,gBAAgB,CAAC,aAAa,EAAE,MAAM,GAAG,MAAM,CAE9D"}

package/dist/ts/ts/FileSystem/Path.js

@@ -1,7 +1,9 @@
-import { join, split as split$1, trimEnd, trimStart, trim } from '../../node_modules/@fable-org/fable-library-js/String.js';
-import { mapIndexed } from '../../node_modules/@fable-org/fable-library-js/Array.js';
+import { ofArray } from '../../node_modules/@fable-org/fable-library-js/List.js';
+import { split as split$1, trimEnd, trimStart, join, trim } from '../../node_modules/@fable-org/fable-library-js/String.js';
+import { mapIndexed, last } from '../../node_modules/@fable-org/fable-library-js/Array.js';
 
 const seperators = ["/", "\\"];
+const alternativeLICENSEFileNames = ofArray(["LICENSE.txt", "LICENSE.md", "LICENSE.rst"]);
 function split(path) {
   const array = split$1(path, seperators, void 0, 3);
   return array.filter((p) => {
@@ -26,11 +28,23 @@ function combineMany(paths) {
     }
   }, paths));
 }
+function getFileName(path) {
+  return last(split(path));
+}
+function isFile(fileName, path) {
+  return getFileName(path) === fileName;
+}
 function getAssayFolderPath(assayIdentifier) {
   return combine("assays", assayIdentifier);
 }
 function getStudyFolderPath(studyIdentifier) {
   return combine("studies", studyIdentifier);
 }
+function getWorkflowFolderPath(workflowIdentifier) {
+  return combine("workflows", workflowIdentifier);
+}
+function getRunFolderPath(runIdentifier) {
+  return combine("runs", runIdentifier);
+}
 
-export { combine, combineMany, getAssayFolderPath, getStudyFolderPath, seperators, split };
+export { alternativeLICENSEFileNames, combine, combineMany, getAssayFolderPath, getFileName, getRunFolderPath, getStudyFolderPath, getWorkflowFolderPath, isFile, seperators, split };

package/dist/ts/ts/Json/Assay.d.ts

@@ -11,7 +11,7 @@ export declare const decoder: Decoder$1<ArcAssay>;
 export declare function encoderCompressed(stringTable: IMap<string, int32>, oaTable: IMap<OntologyAnnotation, int32>, cellTable: IMap<CompositeCell_$union, int32>, assay: ArcAssay): IEncodable;
 export declare function decoderCompressed(stringTable: string[], oaTable: OntologyAnnotation[], cellTable: CompositeCell_$union[]): Decoder$1<ArcAssay>;
 export declare function ROCrate_genID(a: ArcAssay): string;
-export declare function ROCrate_encoder(studyName: Option<string>, a: ArcAssay): IEncodable;
+export declare function ROCrate_encoder(assayName: Option<string>, a: ArcAssay): IEncodable;
 export declare const ROCrate_decoder: Decoder$1<ArcAssay>;
 export declare function ISAJson_encoder(studyName: Option<string>, idMap: Option<IMap<string, IEncodable>>, a: ArcAssay): IEncodable;
 export declare const ISAJson_allowedFields: FSharpList<string>;

package/dist/ts/ts/Json/Assay.js

@@ -1,26 +1,26 @@
-import { ofArray, choose, singleton, empty } from '../../node_modules/@fable-org/fable-library-js/List.js';
-import { defaultArg, bind, map, value, unwrap } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { choose, ofArray, singleton, empty } from '../../node_modules/@fable-org/fable-library-js/List.js';
+import { map, unwrap, defaultArg, value, bind } from '../../node_modules/@fable-org/fable-library-js/Option.js';
 import { tryInclude, tryIncludeSeq, tryIncludeList } from './Encode.js';
-import { OntologyAnnotation_ISAJson_decoder, OntologyAnnotation_decoder, OntologyAnnotation_ROCrate_decoderPropertyValue, OntologyAnnotation_ROCrate_decoderDefinedTerm, OntologyAnnotation_encoder, OntologyAnnotation_ROCrate_encoderPropertyValue, OntologyAnnotation_ROCrate_encoderDefinedTerm, OntologyAnnotation_ISAJson_encoder } from './OntologyAnnotation.js';
-import { decoder as decoder$2, decoderCompressed as decoderCompressed$2, encoder as encoder$1, encoderCompressed as encoderCompressed$2 } from './DataMap/DataMap.js';
-import { decoder as decoder$1, decoderCompressed as decoderCompressed$1, encoder as encoder$2, encoderCompressed as encoderCompressed$1 } from './Table/ArcTable.js';
-import { decoder as decoder$3, ROCrate_decoder as ROCrate_decoder$2, encoder as encoder$3, ROCrate_encoder as ROCrate_encoder$1 } from './Person.js';
-import { ISAJson_decoder as ISAJson_decoder$2, decoder as decoder$4, ROCrate_decoder as ROCrate_decoder$3, encoder as encoder$4, ROCrate_encoder as ROCrate_encoder$3, ISAJson_encoder as ISAJson_encoder$3 } from './Comment.js';
+import { OntologyAnnotation_encoder, OntologyAnnotation_decoder, OntologyAnnotation_ROCrate_encoderPropertyValue, OntologyAnnotation_ROCrate_encoderDefinedTerm, OntologyAnnotation_ROCrate_decoderPropertyValue, OntologyAnnotation_ROCrate_decoderDefinedTerm, OntologyAnnotation_ISAJson_encoder, OntologyAnnotation_ISAJson_decoder } from './OntologyAnnotation.js';
+import { encoder as encoder$1, decoder as decoder$2, encoderCompressed as encoderCompressed$2, decoderCompressed as decoderCompressed$2 } from './DataMap/DataMap.js';
+import { encoder as encoder$2, decoder as decoder$1, encoderCompressed as encoderCompressed$1, decoderCompressed as decoderCompressed$1 } from './Table/ArcTable.js';
+import { encoder as encoder$3, decoder as decoder$3, ROCrate_encoder as ROCrate_encoder$1, ROCrate_decoder as ROCrate_decoder$2 } from './Person.js';
+import { encoder as encoder$4, decoder as decoder$4, ROCrate_encoder as ROCrate_encoder$4, ROCrate_decoder as ROCrate_decoder$3, ISAJson_encoder as ISAJson_encoder$3, ISAJson_decoder as ISAJson_decoder$2 } from './Comment.js';
 import { Comment$ } from '../Core/Comment.js';
-import { tryPick, length, map as map$2, toList, delay, append, empty as empty$1, singleton as singleton$1 } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { map as map$1, toList, delay, append, empty as empty$1, singleton as singleton$1, tryPick, length } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { ArcAssay } from '../Core/ArcTypes.js';
-import { string, list, resizeArray, map as map$1, object } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
+import { object, string, resizeArray, list as list$1, map as map$2 } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 import { replace } from '../../node_modules/@fable-org/fable-library-js/String.js';
-import { createMissingIdentifier, Assay_tryIdentifierFromFileName, Assay_fileNameFromIdentifier } from '../Core/Helper/Identifier.js';
-import { ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D, JsonTypes_decomposeTechnologyPlatform, ARCtrl_ArcTables__ArcTables_GetProcesses, JsonTypes_composeTechnologyPlatform } from '../Core/Conversion.js';
+import { Assay_fileNameFromIdentifier, createMissingIdentifier, Assay_tryIdentifierFromFileName } from '../Core/Helper/Identifier.js';
+import { ARCtrl_ArcTables__ArcTables_GetProcesses, ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D, JsonTypes_composeTechnologyPlatform, JsonTypes_decomposeTechnologyPlatform } from '../Core/Conversion.js';
 import { getData, getUnits, getCharacteristics } from '../Core/Process/ProcessSequence.js';
-import { list as list$1 } from '../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
-import { ISAJson_encoder as ISAJson_encoder$1, ROCrate_encoder as ROCrate_encoder$4 } from './Data.js';
-import { ISAJson_decoder as ISAJson_decoder$1, ROCrate_decoder as ROCrate_decoder$1, ROCrate_encoder as ROCrate_encoder$2, ISAJson_encoder as ISAJson_encoder$2 } from './Process/Process.js';
+import { list } from '../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
+import { ROCrate_encoder as ROCrate_encoder$2, ISAJson_encoder as ISAJson_encoder$1 } from './Data.js';
+import { ROCrate_encoder as ROCrate_encoder$3, ROCrate_decoder as ROCrate_decoder$1, ISAJson_encoder as ISAJson_encoder$2, ISAJson_decoder as ISAJson_decoder$1 } from './Process/Process.js';
 import { context_jsonvalue } from './context/rocrate/isa_assay_context.js';
 import { encoder as encoder$5 } from './Process/MaterialAttribute.js';
 import { encoder as encoder$6 } from './Process/AssayMaterials.js';
-import { ResizeArray_filter, Option_fromValueWithDefault } from '../Core/Helper/Collections.js';
+import { Option_fromValueWithDefault, ResizeArray_filter } from '../Core/Helper/Collections.js';
 import { encode } from './IDTable.js';
 import { Decode_objectNoAdditionalProperties } from './Decode.js';
 
@@ -41,7 +41,7 @@ function encoder(assay) {
   }), assay.Description), tryInclude("MeasurementType", OntologyAnnotation_encoder, assay.MeasurementType), tryInclude("TechnologyType", OntologyAnnotation_encoder, assay.TechnologyType), tryInclude("TechnologyPlatform", OntologyAnnotation_encoder, assay.TechnologyPlatform), tryInclude("DataMap", encoder$1, assay.DataMap), tryIncludeSeq("Tables", encoder$2, assay.Tables), tryIncludeSeq("Performers", encoder$3, assay.Performers), tryIncludeSeq("Comments", encoder$4, assay.Comments)]));
   return {
     Encode(helpers_3) {
-      const arg = map$2((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
+      const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
       return helpers_3.encodeObject(arg);
     }
   };
@@ -67,7 +67,7 @@ function encoderCompressed(stringTable, oaTable, cellTable, assay) {
   }), assay.Description), tryInclude("MeasurementType", OntologyAnnotation_encoder, assay.MeasurementType), tryInclude("TechnologyType", OntologyAnnotation_encoder, assay.TechnologyType), tryInclude("TechnologyPlatform", OntologyAnnotation_encoder, assay.TechnologyPlatform), tryIncludeSeq("Tables", (table) => encoderCompressed$1(stringTable, oaTable, cellTable, table), assay.Tables), tryInclude("DataMap", (dm) => encoderCompressed$2(stringTable, oaTable, cellTable, dm), assay.DataMap), tryIncludeSeq("Performers", encoder$3, assay.Performers), tryIncludeSeq("Comments", encoder$4, assay.Comments)]));
   return {
     Encode(helpers_3) {
-      const arg = map$2((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
+      const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
       return helpers_3.encodeObject(arg);
     }
   };
@@ -75,7 +75,7 @@ function encoderCompressed(stringTable, oaTable, cellTable, assay) {
 function decoderCompressed(stringTable, oaTable, cellTable) {
   return object((get$) => {
     let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8, arg_19, objectArg_9;
-    return ArcAssay.create((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("MeasurementType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("TechnologyType", OntologyAnnotation_decoder))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("TechnologyPlatform", OntologyAnnotation_decoder))), unwrap((arg_13 = resizeArray(decoderCompressed$1(stringTable, oaTable, cellTable)), objectArg_6 = get$.Optional, objectArg_6.Field("Tables", arg_13))), unwrap((arg_15 = decoderCompressed$2(), objectArg_7 = get$.Optional, objectArg_7.Field("DataMap", arg_15))), unwrap((arg_17 = resizeArray(decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("Performers", arg_17))), unwrap((arg_19 = resizeArray(decoder$4), objectArg_9 = get$.Optional, objectArg_9.Field("Comments", arg_19))));
+    return ArcAssay.create((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("MeasurementType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("TechnologyType", OntologyAnnotation_decoder))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("TechnologyPlatform", OntologyAnnotation_decoder))), unwrap((arg_13 = resizeArray(decoderCompressed$1(stringTable, oaTable, cellTable)), objectArg_6 = get$.Optional, objectArg_6.Field("Tables", arg_13))), unwrap((arg_15 = decoderCompressed$2(stringTable, oaTable, cellTable), objectArg_7 = get$.Optional, objectArg_7.Field("DataMap", arg_15))), unwrap((arg_17 = resizeArray(decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("Performers", arg_17))), unwrap((arg_19 = resizeArray(decoder$4), objectArg_9 = get$.Optional, objectArg_9.Field("Comments", arg_19))));
   });
 }
 function ROCrate_genID(a) {
@@ -86,8 +86,8 @@ function ROCrate_genID(a) {
     return `assays/${replace(matchValue, " ", "_")}/`;
   }
 }
-function ROCrate_encoder(studyName, a) {
-  let value, value_3, assayName;
+function ROCrate_encoder(assayName, a) {
+  let value, value_3, assayName_1;
   const fileName = Assay_fileNameFromIdentifier(a.Identifier);
   const processes = ARCtrl_ArcTables__ArcTables_GetProcesses(a);
   const dataFiles = getData(processes);
@@ -95,7 +95,7 @@ function ROCrate_encoder(studyName, a) {
     Encode(helpers) {
       return helpers.encodeString(value);
     }
-  })], ["@type", list$1(singleton({
+  })], ["@type", list(singleton({
     Encode(helpers_1) {
       return helpers_1.encodeString("Assay");
     }
@@ -119,10 +119,10 @@ function ROCrate_encoder(studyName, a) {
     Encode(helpers_6) {
       return helpers_6.encodeString(value_7);
     }
-  }), a.Description), tryInclude("measurementType", OntologyAnnotation_ROCrate_encoderPropertyValue, a.MeasurementType), tryInclude("technologyType", OntologyAnnotation_ROCrate_encoderDefinedTerm, a.TechnologyType), tryInclude("technologyPlatform", OntologyAnnotation_ROCrate_encoderDefinedTerm, a.TechnologyPlatform), tryIncludeSeq("performers", ROCrate_encoder$1, a.Performers), tryIncludeList("dataFiles", ROCrate_encoder$4, dataFiles), tryIncludeList("processSequence", (assayName = a.Identifier, (oa_5) => ROCrate_encoder$2(studyName, assayName, oa_5)), processes), tryIncludeSeq("comments", ROCrate_encoder$3, a.Comments), ["@context", context_jsonvalue]]));
+  }), a.Description), tryInclude("measurementType", OntologyAnnotation_ROCrate_encoderPropertyValue, a.MeasurementType), tryInclude("technologyType", OntologyAnnotation_ROCrate_encoderDefinedTerm, a.TechnologyType), tryInclude("technologyPlatform", OntologyAnnotation_ROCrate_encoderDefinedTerm, a.TechnologyPlatform), tryIncludeSeq("performers", ROCrate_encoder$1, a.Performers), tryIncludeList("dataFiles", ROCrate_encoder$2, dataFiles), tryIncludeList("processSequence", (assayName_1 = a.Identifier, (oa_5) => ROCrate_encoder$3(assayName, assayName_1, oa_5)), processes), tryIncludeSeq("comments", ROCrate_encoder$4, a.Comments), ["@context", context_jsonvalue]]));
   return {
     Encode(helpers_7) {
-      const arg = map$2((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_7)], values_1);
+      const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_7)], values_1);
       return helpers_7.encodeObject(arg);
     }
   };
@@ -133,7 +133,7 @@ const ROCrate_decoder = object((get$) => {
   const tables = map((arg_4) => {
     const a = ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D(arg_4);
     return a.Tables;
-  }, (arg_3 = list(ROCrate_decoder$1), objectArg_1 = get$.Optional, objectArg_1.Field("processSequence", arg_3)));
+  }, (arg_3 = list$1(ROCrate_decoder$1), objectArg_1 = get$.Optional, objectArg_1.Field("processSequence", arg_3)));
   return new ArcAssay(identifier, unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("title", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("description", string))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("measurementType", OntologyAnnotation_ROCrate_decoderPropertyValue))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("technologyType", OntologyAnnotation_ROCrate_decoderDefinedTerm))), unwrap((objectArg_6 = get$.Optional, objectArg_6.Field("technologyPlatform", OntologyAnnotation_ROCrate_decoderDefinedTerm))), unwrap(tables), void 0, unwrap((arg_16 = resizeArray(ROCrate_decoder$2), objectArg_7 = get$.Optional, objectArg_7.Field("performers", arg_16))), unwrap((arg_18 = resizeArray(ROCrate_decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("comments", arg_18))));
 });
 function ISAJson_encoder(studyName, idMap, a) {
@@ -145,7 +145,7 @@ function ISAJson_encoder(studyName, idMap, a) {
     const encodedCharacteristics = tryIncludeList("characteristicCategories", (value_1) => encoder$5(idMap, value_1), getCharacteristics(processes));
     const encodedMaterials = tryInclude("materials", (ps) => encoder$6(idMap, ps), Option_fromValueWithDefault(empty(), processes));
     const encocedDataFiles = tryIncludeList("dataFiles", (oa_1) => ISAJson_encoder$1(idMap, oa_1), getData(processes));
-    getUnits(processes);
+    const units = getUnits(processes);
     const comments = toList(delay(() => append(a_1.Comments.length > 0 ? a_1.Comments : empty$1(), delay(() => append(a_1.Title != null ? singleton$1(Comment$.create("title", value(a_1.Title))) : empty$1(), delay(() => a_1.Description != null ? singleton$1(Comment$.create("description", value(a_1.Description))) : empty$1()))))));
     const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["filename", {
       Encode(helpers) {
@@ -162,7 +162,7 @@ function ISAJson_encoder(studyName, idMap, a) {
     }), map(JsonTypes_composeTechnologyPlatform, a_1.TechnologyPlatform)), encocedDataFiles, encodedMaterials, encodedCharacteristics, encodedUnits, tryIncludeList("processSequence", (assayName = a_1.Identifier, (oa_4) => ISAJson_encoder$2(studyName, assayName, idMap, oa_4)), processes), tryIncludeSeq("comments", (comment) => ISAJson_encoder$3(idMap, comment), comments)]));
     return {
       Encode(helpers_3) {
-        const arg = map$2((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
+        const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
         return helpers_3.encodeObject(arg);
       }
     };
@@ -180,7 +180,7 @@ const ISAJson_decoder = Decode_objectNoAdditionalProperties(ISAJson_allowedField
   const tables = map((arg_4) => {
     const a = ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D(arg_4);
     return a.Tables;
-  }, (arg_3 = list(ISAJson_decoder$1), objectArg_1 = get$.Optional, objectArg_1.Field("processSequence", arg_3)));
+  }, (arg_3 = list$1(ISAJson_decoder$1), objectArg_1 = get$.Optional, objectArg_1.Field("processSequence", arg_3)));
   let comments;
   const arg_6 = resizeArray(ISAJson_decoder$2);
   const objectArg_2 = get$.Optional;
@@ -215,7 +215,7 @@ const ISAJson_decoder = Decode_objectNoAdditionalProperties(ISAJson_allowedField
       return matchValue;
     }
   }, comments);
-  return new ArcAssay(identifier, unwrap(title), unwrap(description), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("measurementType", OntologyAnnotation_ISAJson_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("technologyType", OntologyAnnotation_ISAJson_decoder))), unwrap((arg_12 = map$1(JsonTypes_decomposeTechnologyPlatform, string), objectArg_5 = get$.Optional, objectArg_5.Field("technologyPlatform", arg_12))), unwrap(tables), void 0, void 0, unwrap(comments_1));
+  return new ArcAssay(identifier, unwrap(title), unwrap(description), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("measurementType", OntologyAnnotation_ISAJson_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("technologyType", OntologyAnnotation_ISAJson_decoder))), unwrap((arg_12 = map$2(JsonTypes_decomposeTechnologyPlatform, string), objectArg_5 = get$.Optional, objectArg_5.Field("technologyPlatform", arg_12))), unwrap(tables), void 0, void 0, unwrap(comments_1));
 });
 
 export { ISAJson_allowedFields, ISAJson_decoder, ISAJson_encoder, ROCrate_decoder, ROCrate_encoder, ROCrate_genID, decoder, decoderCompressed, encoder, encoderCompressed };

package/dist/ts/ts/Json/Comment.js

@@ -1,16 +1,16 @@
 import { choose, ofArray } from '../../node_modules/@fable-org/fable-library-js/List.js';
-import { unwrap, map as map$1, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { map, unwrap, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
 import { tryInclude } from './Encode.js';
-import { map as map$2 } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { map as map$1 } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { Comment$ } from '../Core/Comment.js';
-import { object, string, map } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
+import { object, string, map as map$2 } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 import { replace } from '../../node_modules/@fable-org/fable-library-js/String.js';
 import { context_jsonvalue } from './context/rocrate/isa_comment_context.js';
 import { toString } from '../../node_modules/@fable-org/fable-library-js/Types.js';
 import { encode } from './IDTable.js';
 
 function encoder(comment) {
-  const values_1 = choose((tupledArg) => map$1((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([tryInclude("name", (value) => ({
+  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([tryInclude("name", (value) => ({
     Encode(helpers) {
       return helpers.encodeString(value);
     }
@@ -21,7 +21,7 @@ function encoder(comment) {
   }), comment.Value)]));
   return {
     Encode(helpers_2) {
-      const arg = map$2((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_2)], values_1);
+      const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_2)], values_1);
       return helpers_2.encodeObject(arg);
     }
   };
@@ -42,7 +42,7 @@ function ROCrate_genID(c) {
 }
 function ROCrate_encoder(comment) {
   let value;
-  const values_1 = choose((tupledArg) => map$1((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["@id", (value = ROCrate_genID(comment), {
+  const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["@id", (value = ROCrate_genID(comment), {
     Encode(helpers) {
       return helpers.encodeString(value);
     }
@@ -61,7 +61,7 @@ function ROCrate_encoder(comment) {
   }), comment.Value), ["@context", context_jsonvalue]]));
   return {
     Encode(helpers_4) {
-      const arg = map$2((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_4)], values_1);
+      const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_4)], values_1);
       return helpers_4.encodeObject(arg);
     }
   };
@@ -78,10 +78,10 @@ function ROCrate_encoderDisambiguatingDescription(comment) {
     }
   };
 }
-const ROCrate_decoderDisambiguatingDescription = map((s) => Comment$.fromString(s), string);
+const ROCrate_decoderDisambiguatingDescription = map$2((s) => Comment$.fromString(s), string);
 function ISAJson_encoder(idMap, comment) {
   const f = (comment_1) => {
-    const values_1 = choose((tupledArg) => map$1((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([tryInclude("@id", (value) => ({
+    const values_1 = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([tryInclude("@id", (value) => ({
       Encode(helpers) {
         return helpers.encodeString(value);
       }
@@ -96,7 +96,7 @@ function ISAJson_encoder(idMap, comment) {
     }), comment_1.Value)]));
     return {
       Encode(helpers_3) {
-        const arg = map$2((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
+        const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
         return helpers_3.encodeObject(arg);
       }
     };

package/dist/ts/ts/Json/Data.js

@@ -1,13 +1,13 @@
-import { ofArray, choose, singleton } from '../../node_modules/@fable-org/fable-library-js/List.js';
-import { unwrap, map, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { choose, ofArray, singleton } from '../../node_modules/@fable-org/fable-library-js/List.js';
+import { map, unwrap, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
 import { tryInclude, tryIncludeSeq } from './Encode.js';
-import { ROCrate_decoder as ROCrate_decoder$1, ISAJson_decoder as ISAJson_decoder$1, ROCrate_encoder as ROCrate_encoder$1, ISAJson_encoder as ISAJson_encoder$1 } from './DataFile.js';
-import { ROCrate_decoder as ROCrate_decoder$2, ISAJson_decoder as ISAJson_decoder$2, ROCrate_encoder as ROCrate_encoder$2, decoder as decoder$1, encoder as encoder$1, ISAJson_encoder as ISAJson_encoder$2 } from './Comment.js';
+import { ISAJson_encoder as ISAJson_encoder$1, ISAJson_decoder as ISAJson_decoder$1, ROCrate_encoder as ROCrate_encoder$1, ROCrate_decoder as ROCrate_decoder$1 } from './DataFile.js';
+import { encoder as encoder$1, decoder as decoder$1, ROCrate_encoder as ROCrate_encoder$2, ROCrate_decoder as ROCrate_decoder$2, ISAJson_encoder as ISAJson_encoder$2, ISAJson_decoder as ISAJson_decoder$2 } from './Comment.js';
 import { map as map$1 } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { Data } from '../Core/Data.js';
 import { object, string, resizeArray } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
-import { Decode_objectNoAdditionalProperties, Decode_uri } from './Decode.js';
-import { decodeString, encodeString } from './StringTable.js';
+import { Decode_uri, Decode_objectNoAdditionalProperties } from './Decode.js';
+import { encodeString, decodeString } from './StringTable.js';
 import { replace } from '../../node_modules/@fable-org/fable-library-js/String.js';
 import { URIModule_toString } from '../Core/URI.js';
 import { list } from '../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';

package/dist/ts/ts/Json/DataMap/DataContext.js

@@ -1,9 +1,9 @@
 import { choose, ofArray } from '../../../node_modules/@fable-org/fable-library-js/List.js';
-import { unwrap, map } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
-import { decoder as decoder$1, encoder as encoder$1 } from '../Data.js';
+import { map, unwrap } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
+import { encoder as encoder$1, decoder as decoder$1 } from '../Data.js';
 import { tryInclude } from '../Encode.js';
-import { OntologyAnnotation_decoder, OntologyAnnotation_encoder } from '../OntologyAnnotation.js';
-import { DataContext_$ctor_Z780A8A2A, DataContext__get_Explication, DataContext__get_Unit, DataContext__get_ObjectType, DataContext__get_Description, DataContext__get_GeneratedBy, DataContext__get_Label } from '../../Core/DataContext.js';
+import { OntologyAnnotation_encoder, OntologyAnnotation_decoder } from '../OntologyAnnotation.js';
+import { DataContext__get_Explication, DataContext__get_Unit, DataContext__get_ObjectType, DataContext__get_Description, DataContext__get_GeneratedBy, DataContext__get_Label, DataContext_$ctor_Z780A8A2A } from '../../Core/DataContext.js';
 import { map as map$1 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { object, string } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 

package/dist/ts/ts/Json/DataMap/DataMap.js

@@ -1,7 +1,7 @@
 import { seq } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
 import { map } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
-import { decoder as decoder$1, encoder as encoder$1 } from './DataContext.js';
-import { DataMap_$ctor_4E3220A7, DataMap__get_DataContexts } from '../../Core/DataMap.js';
+import { encoder as encoder$1, decoder as decoder$1 } from './DataContext.js';
+import { DataMap__get_DataContexts, DataMap_$ctor_4E3220A7 } from '../../Core/DataMap.js';
 import { object, resizeArray } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 
 function encoder(dm) {

package/dist/ts/ts/Json/Decode.js

@@ -1,9 +1,10 @@
-import { ErrorReason$1_BadPrimitive, ErrorReason$1_BadOneOf, ErrorReason$1_FailMessage } from '../fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js';
-import { Getters$2_$ctor_Z4BE6C149, Getters$2__get_Errors, tuple2, string, int } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
-import { FSharpResult$2_Ok, FSharpResult$2_Error, Result_Map } from '../../node_modules/@fable-org/fable-library-js/Result.js';
+import { ErrorReason$1_FailMessage, ErrorReason$1_BadPrimitive, ErrorReason$1_BadOneOf } from '../fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js';
+import { string, Getters$2_$ctor_Z4BE6C149, Getters$2__get_Errors, tuple2, int } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
+import { FSharpResult$2_Error, FSharpResult$2_Ok, Result_Map } from '../../node_modules/@fable-org/fable-library-js/Result.js';
+import { toText, printf } from '../../node_modules/@fable-org/fable-library-js/String.js';
 import { exists } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
-import { ofSeq, contains } from '../../node_modules/@fable-org/fable-library-js/Set.js';
-import { int32ToString, structuralHash, equals, comparePrimitives } from '../../node_modules/@fable-org/fable-library-js/Util.js';
+import { contains, ofSeq } from '../../node_modules/@fable-org/fable-library-js/Set.js';
+import { comparePrimitives, int32ToString, structuralHash, equals } from '../../node_modules/@fable-org/fable-library-js/Util.js';
 import { isEmpty, length, head, empty, cons, tail } from '../../node_modules/@fable-org/fable-library-js/List.js';
 import { fold } from '../../node_modules/@fable-org/fable-library-js/Array.js';
 import { minValue, tryParse } from '../../node_modules/@fable-org/fable-library-js/Date.js';
@@ -26,7 +27,10 @@ const Decode_uri = {
       return FSharpResult$2_Error(matchValue.fields[0]);
     } else if (Decode_isURI(matchValue.fields[0])) {
       return FSharpResult$2_Ok(matchValue.fields[0]);
-    } else ;
+    } else {
+      const s_3 = matchValue.fields[0];
+      return FSharpResult$2_Error([s_3, ErrorReason$1_FailMessage(toText(printf("Expected URI, got %s"))(s_3))]);
+    }
   }
 };
 function Decode_hasUnknownFields(helpers, knownFields, json) {
@@ -60,7 +64,7 @@ function Decode_noAdditionalProperties(allowedProperties, decoder) {
   });
   return {
     Decode(helpers, value) {
-      Getters$2_$ctor_Z4BE6C149(helpers, value);
+      const getters = Getters$2_$ctor_Z4BE6C149(helpers, value);
       return Decode_hasUnknownFields(helpers, allowedProperties_1, value) ? FSharpResult$2_Error(["Unknown fields in object", ErrorReason$1_BadPrimitive("", value)]) : decoder.Decode(helpers, value);
     }
   };
@@ -113,7 +117,7 @@ function Decode_dictionary(keyDecoder, valueDecoder) {
   return {
     Decode(helpers, value) {
       if (helpers.isArray(value)) {
-        empty();
+        let errors = empty();
         const tokens = helpers.asArray(value);
         const dict = new Dictionary([], {
           Equals: equals,
@@ -147,7 +151,7 @@ function Decode_intDictionary(valueDecoder) {
   return {
     Decode(helpers, value) {
       if (helpers.isArray(value)) {
-        empty();
+        let errors = empty();
         const tokens = helpers.asArray(value);
         const dict = /* @__PURE__ */ new Map([]);
         const decoder = tuple2(int, valueDecoder);
@@ -199,6 +203,7 @@ function Decode_tryOneOf(decoders) {
             } else {
               return FSharpResult$2_Error(["", ErrorReason$1_BadOneOf(errors)]);
             }
+            break;
           }
       };
       return loop(empty(), decoders);