@nfdi4plants/arctrl 3.0.0-beta.4 → 3.0.0-beta.6

package/dist/ts/ts/Conversion.js

@@ -1,42 +1,43 @@
 import { fromString } from './fable_modules/Thoth.Json.JavaScript.0.4.1/Decode.fs.js';
 import { Decode_datetime } from './Json/Decode.js';
-import { toText, printf, join, toFail } from '../node_modules/@fable-org/fable-library-js/String.js';
-import { unwrap, map, value, bind, defaultArg } from '../node_modules/@fable-org/fable-library-js/Option.js';
-import { toString as toString$1 } from './fable_modules/Thoth.Json.JavaScript.0.4.1/Encode.fs.js';
+import { toText, printf, toFail, join } from '../node_modules/@fable-org/fable-library-js/String.js';
+import { value, unwrap, map, defaultArg, bind } from '../node_modules/@fable-org/fable-library-js/Option.js';
+import { toString } from './fable_modules/Thoth.Json.JavaScript.0.4.1/Encode.fs.js';
 import { dateTime } from './Json/Encode.js';
 import { tryParse, parse } from '../node_modules/@fable-org/fable-library-js/Int32.js';
-import { toString, FSharpRef } from '../node_modules/@fable-org/fable-library-js/Types.js';
+import { FSharpRef, toString as toString$1 } from '../node_modules/@fable-org/fable-library-js/Types.js';
 import { LDRef, LDNode } from './ROCrate/LDObject.js';
-import { getEnumerator, disposeSafe, int32ToString, comparePrimitives, stringHash } from '../node_modules/@fable-org/fable-library-js/Util.js';
+import { int32ToString, stringHash, comparePrimitives, getEnumerator, disposeSafe, safeHash, equals } from '../node_modules/@fable-org/fable-library-js/Util.js';
+import { class_type } from '../node_modules/@fable-org/fable-library-js/Reflection.js';
 import { LDComment } from './ROCrate/Generic/Comment.js';
 import { Comment$ } from './Core/Comment.js';
 import { OntologyAnnotation } from './Core/OntologyAnnotation.js';
-import { Option_fromSeq, ResizeArray_map, ResizeArray_singleton, ResizeArray_appendSingleton, Option_fromValueWithDefault, ResizeArray_append, ResizeArray_filter, ResizeArray_distinct, ResizeArray_collect, ResizeArray_choose, ResizeArray_groupBy, ResizeArray_tryFind, ResizeArray_tryPick, ResizeArray_create, ResizeArray_zip } from './Core/Helper/Collections.js';
+import { Option_fromValueWithDefault, Option_fromSeq, ResizeArray_map, ResizeArray_singleton, ResizeArray_create, ResizeArray_zip, ResizeArray_appendSingleton, ResizeArray_tryPick, ResizeArray_distinct, ResizeArray_append, ResizeArray_choose, ResizeArray_collect, ResizeArray_filter, ResizeArray_tryFind, ResizeArray_groupBy } from './Core/Helper/Collections.js';
 import { LDDefinedTerm } from './ROCrate/Generic/DefinedTerm.js';
 import { LDPropertyValue } from './ROCrate/Generic/PropertyValue.js';
-import { DataAux_pathAndSelectorFromName, Data } from './Core/Data.js';
-import { CompositeCell_FreeText, CompositeCell_Term, CompositeCell_Unitized, CompositeCell_Data } from './Core/Table/CompositeCell.js';
-import { CompositeHeader_Comment, CompositeHeader_Parameter, CompositeHeader_Component, CompositeHeader_Characteristic, CompositeHeader_Factor, CompositeHeader_ProtocolREF, CompositeHeader_Input, IOType_Source, IOType_Material, IOType_Sample, IOType_Data, IOType_FreeText, CompositeHeader_ProtocolDescription, CompositeHeader_ProtocolUri, CompositeHeader_ProtocolVersion, CompositeHeader_ProtocolType, CompositeHeader_Output } from './Core/Table/CompositeHeader.js';
+import { Data, DataAux_pathAndSelectorFromName } from './Core/Data.js';
+import { CompositeCell_Term, CompositeCell_Unitized, CompositeCell_FreeText, CompositeCell_Data } from './Core/Table/CompositeCell.js';
+import { CompositeHeader_Component, CompositeHeader_Parameter, CompositeHeader_Factor, CompositeHeader_Characteristic, CompositeHeader_Input, IOType_Source, IOType_Material, IOType_Sample, IOType_Data, IOType_FreeText, CompositeHeader_Output, CompositeHeader_ProtocolREF, CompositeHeader_ProtocolDescription, CompositeHeader_ProtocolUri, CompositeHeader_ProtocolVersion, CompositeHeader_ProtocolType, CompositeHeader_Comment } from './Core/Table/CompositeHeader.js';
 import { DataFile__get_AsString, DataFile_fromString_Z721C83C5 } from './Core/DataFile.js';
 import { LDFile } from './ROCrate/Generic/File.js';
 import { LDDataset } from './ROCrate/Generic/Dataset.js';
-import { map as map$3 } from '../node_modules/@fable-org/fable-library-js/Array.js';
+import { map as map$1 } from '../node_modules/@fable-org/fable-library-js/Array.js';
 import { combine } from './FileSystem/Path.js';
 import { DataContext__get_Explication, DataContext__get_Unit, DataContext__get_ObjectType, DataContext__get_GeneratedBy, DataContext__get_Description, DataContext__get_Label, DataContext_$ctor_Z780A8A2A } from './Core/DataContext.js';
 import { LDSample } from './ROCrate/Generic/Sample.js';
 import { ActivePatterns_$007CRegex$007C_$007C } from './Core/Helper/Regex.js';
 import { LDLabProtocol } from './ROCrate/Generic/LabProtocol.js';
-import { Unchecked_alignByHeaders, Unchecked_tryGetCellAt, getEmptyCellForHeader } from './Core/Table/ArcTableAux.js';
+import { Unchecked_tryGetCellAt, getEmptyCellForHeader, Unchecked_alignByHeaders } from './Core/Table/ArcTableAux.js';
 import { ArcTable } from './Core/Table/ArcTable.js';
 import { LDPerson } from './ROCrate/Generic/Person.js';
-import { toList, delay, isEmpty, filter, map as map$2, indexed, tryPick, choose as choose$1, append, empty as empty$1, singleton as singleton$1 } from '../node_modules/@fable-org/fable-library-js/Seq.js';
-import { ofSeq, collect, map as map$1, singleton, empty, sortBy, choose, length } from '../node_modules/@fable-org/fable-library-js/List.js';
+import { indexed, toList, filter, tryPick, choose as choose$1, map as map$2, delay, append, empty as empty$1, singleton, fold, zip, isEmpty } from '../node_modules/@fable-org/fable-library-js/Seq.js';
+import { choose, length, empty, map as map$3, sortBy, singleton as singleton$1, initialize, collect, ofSeq } from '../node_modules/@fable-org/fable-library-js/List.js';
 import { LDLabProcess } from './ROCrate/Generic/LabProcess.js';
-import { List_groupBy } from '../node_modules/@fable-org/fable-library-js/Seq2.js';
+import { List_groupBy, List_distinct } from '../node_modules/@fable-org/fable-library-js/Seq2.js';
 import { createMissingIdentifier } from './Core/Helper/Identifier.js';
 import { rangeDouble } from '../node_modules/@fable-org/fable-library-js/Range.js';
 import { ArcTables } from './Core/Table/ArcTables.js';
-import { DataMap_init, DataMap__get_DataContexts, DataMap_$ctor_4E3220A7 } from './Core/DataMap.js';
+import { DataMap__get_DataContexts, DataMap_$ctor_4E3220A7, DataMap_init } from './Core/DataMap.js';
 import { LDOrganization } from './ROCrate/Generic/Organization.js';
 import { decoder, encoder } from './Json/ROCrate/LDNode.js';
 import { Person } from './Core/Person.js';
@@ -60,7 +61,7 @@ function DateTime_tryFromString(s) {
   }
 }
 function DateTime_toString(d) {
-  return toString$1(0, dateTime(d));
+  return toString(0, dateTime(d));
 }
 function ColumnIndex_tryInt(str) {
   let matchValue;
@@ -98,9 +99,22 @@ function ColumnIndex_tryGetIndex(node) {
 function ColumnIndex_setIndex(node, index) {
   node.SetProperty(ColumnIndex_orderName, int32ToString(index));
 }
+function ARCtrl_ROCrate_LDNode__LDNode_GetColumnIndex(this$) {
+  return value(ColumnIndex_tryGetIndex(this$));
+}
+function ARCtrl_ROCrate_LDNode__LDNode_TryGetColumnIndex(this$) {
+  return ColumnIndex_tryGetIndex(this$);
+}
 function ARCtrl_ROCrate_LDNode__LDNode_SetColumnIndex_Z524259A4(this$, index) {
   ColumnIndex_setIndex(this$, index);
 }
+class BaseTypes {
+  constructor() {
+  }
+}
+function BaseTypes_$reflection() {
+  return class_type("ARCtrl.Conversion.BaseTypes", void 0, BaseTypes);
+}
 function BaseTypes_composeComment_Z13201A7E(comment) {
   let name;
   const matchValue = comment.Name;
@@ -149,7 +163,7 @@ function BaseTypes_valuesOfCell_Z436420FE(value) {
     case /* Term */
     0:
       if (term = value.fields[0], term.isEmpty()) {
-        value.fields[0];
+        const term_2 = value.fields[0];
         return [void 0, void 0, void 0, void 0];
       } else if (term_1 = value.fields[0], term_1.TANInfo != null) {
         const term_3 = value.fields[0];
@@ -167,7 +181,7 @@ function BaseTypes_valuesOfCell_Z436420FE(value) {
     }
     case /* Data */
     3: {
-      value.fields[0];
+      const data = value.fields[0];
       throw new Error("Data cell should not be parsed to isa value");
     }
     default:
@@ -256,7 +270,7 @@ function BaseTypes_composeFile_6CE21C7D(d, fs) {
         const file = createFile();
         file.SchemaType = [LDFile.schemaType, LDDataset.schemaType];
         let subFiles;
-        const collection = map$3((fp) => {
+        const collection = map$1((fp) => {
           const fullPath = combine(d.NameText, fp);
           return LDFile.create(fullPath, fullPath);
         }, fs_2.ToFilePaths(true));
@@ -284,7 +298,7 @@ function BaseTypes_composeFragmentDescriptor_Z4C0BEF62(dc) {
   const id = LDPropertyValue.genIdFragmentDescriptor(dc.NameText);
   const patternInput = defaultArg(map((e) => [e.Name, Option_fromValueWithDefault("", e.TermAccessionAndOntobeeUrlIfShort)], DataContext__get_Explication(dc)), [void 0, void 0]);
   const patternInput_1 = defaultArg(map((u) => [u.Name, Option_fromValueWithDefault("", u.TermAccessionAndOntobeeUrlIfShort)], DataContext__get_Unit(dc)), [void 0, void 0]);
-  const disambiguatingDescriptions = Option_fromSeq(ResizeArray_map(toString, dc.Comments));
+  const disambiguatingDescriptions = Option_fromSeq(ResizeArray_map(toString$1, dc.Comments));
   const dataFragment = BaseTypes_composeFile_6CE21C7D(dc);
   const pattern = map(BaseTypes_composeDefinedTerm_ZDED3A0F, DataContext__get_ObjectType(dc));
   dataFragment.SetProperty(LDFile.about, new LDRef(id));
@@ -495,6 +509,34 @@ function BaseTypes_decomposeProcessOutput_Z2F770004(pn, context) {
     return [CompositeHeader_Output(IOType_FreeText(n.SchemaType[0])), CompositeCell_FreeText(LDSample.getNameAsString(n, unwrap(context)))];
   }
 }
+function BaseTypes_composeTechnologyPlatform_ZDED3A0F(tp) {
+  const matchValue = tp.TANInfo;
+  if (matchValue == null) {
+    return `${tp.NameText}`;
+  } else {
+    return `${tp.NameText} (${tp.TermAccessionShort})`;
+  }
+}
+function BaseTypes_decomposeTechnologyPlatform_Z721C83C5(name) {
+  const activePatternResult = ActivePatterns_$007CRegex$007C_$007C("^(?<value>.+) \\((?<ontology>[^(]*:[^)]*)\\)$", name);
+  if (activePatternResult != null) {
+    const r = value(activePatternResult);
+    let oa;
+    const tan = r.groups && r.groups.ontology || "";
+    oa = OntologyAnnotation.fromTermAnnotation(tan);
+    const v = r.groups && r.groups.value || "";
+    return OntologyAnnotation.create(v, unwrap(oa.TermSourceREF), unwrap(oa.TermAccessionNumber));
+  } else {
+    return OntologyAnnotation.create(name);
+  }
+}
+class ProcessConversion {
+  constructor() {
+  }
+}
+function ProcessConversion_$reflection() {
+  return class_type("ARCtrl.Conversion.ProcessConversion", void 0, ProcessConversion);
+}
 function ProcessConversion_tryGetProtocolType_Z6839B9E8(pv, graph, context) {
   const matchValue = LDLabProtocol.tryGetIntendedUseAsDefinedTerm(pv, unwrap(graph), unwrap(context));
   if (matchValue == null) {
@@ -524,7 +566,7 @@ function ProcessConversion_decomposeProcessName_Z721C83C5(name) {
 function ProcessConversion_tryComponentGetter(generalI, valueI, valueHeader) {
   if (valueHeader.tag === /* Component */
   0) {
-    valueHeader.fields[0];
+    const oa = valueHeader.fields[0];
     return (table) => (i) => {
       let matchValue;
       const c = BaseTypes_composeComponent(valueHeader, (matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values), matchValue == null ? getEmptyCellForHeader(valueHeader, void 0) : value(matchValue)));
@@ -538,7 +580,7 @@ function ProcessConversion_tryComponentGetter(generalI, valueI, valueHeader) {
 function ProcessConversion_tryParameterGetter(generalI, valueI, valueHeader) {
   if (valueHeader.tag === /* Parameter */
   3) {
-    valueHeader.fields[0];
+    const oa = valueHeader.fields[0];
     return (table) => (i) => {
       let matchValue;
       const p = BaseTypes_composeParameterValue(valueHeader, (matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values), matchValue == null ? getEmptyCellForHeader(valueHeader, void 0) : value(matchValue)));
@@ -552,7 +594,7 @@ function ProcessConversion_tryParameterGetter(generalI, valueI, valueHeader) {
 function ProcessConversion_tryFactorGetter(generalI, valueI, valueHeader) {
   if (valueHeader.tag === /* Factor */
   2) {
-    valueHeader.fields[0];
+    const oa = valueHeader.fields[0];
     return (table) => (i) => {
       let matchValue;
       const f = BaseTypes_composeFactorValue(valueHeader, (matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values), matchValue == null ? getEmptyCellForHeader(valueHeader, void 0) : value(matchValue)));
@@ -566,7 +608,7 @@ function ProcessConversion_tryFactorGetter(generalI, valueI, valueHeader) {
 function ProcessConversion_tryCharacteristicGetter(generalI, valueI, valueHeader) {
   if (valueHeader.tag === /* Characteristic */
   1) {
-    valueHeader.fields[0];
+    const oa = valueHeader.fields[0];
     return (table) => (i) => {
       let matchValue;
       const c = BaseTypes_composeCharacteristicValue(valueHeader, (matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values), matchValue == null ? getEmptyCellForHeader(valueHeader, void 0) : value(matchValue)));
@@ -655,7 +697,7 @@ function ProcessConversion_tryGetProtocolVersionGetter(generalI, header) {
 function ProcessConversion_tryGetInputGetter(generalI, header, fs) {
   if (header.tag === /* Input */
   11) {
-    header.fields[0];
+    const io = header.fields[0];
     return (table) => (i) => {
       let matchValue;
       return BaseTypes_composeProcessInput(header, (matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values), matchValue == null ? getEmptyCellForHeader(header, void 0) : value(matchValue)), fs);
@@ -667,7 +709,7 @@ function ProcessConversion_tryGetInputGetter(generalI, header, fs) {
 function ProcessConversion_tryGetOutputGetter(generalI, header, fs) {
   if (header.tag === /* Output */
   12) {
-    header.fields[0];
+    const io = header.fields[0];
     return (table) => (i) => {
       let matchValue;
       return BaseTypes_composeProcessOutput(header, (matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values), matchValue == null ? getEmptyCellForHeader(header, void 0) : value(matchValue)), fs);
@@ -682,7 +724,7 @@ function ProcessConversion_tryGetCommentGetter(generalI, header) {
     const c = header.fields[0];
     return (table) => (i) => {
       let matchValue, cell;
-      return toString((matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values), matchValue == null ? new Comment$(c) : (cell = value(matchValue), new Comment$(c, cell.AsFreeText))));
+      return toString$1((matchValue = Unchecked_tryGetCellAt(generalI, i, table.Values), matchValue == null ? new Comment$(c) : (cell = value(matchValue), new Comment$(c, cell.AsFreeText))));
     };
   } else {
     return void 0;
@@ -778,9 +820,9 @@ function ProcessConversion_getProcessGetter(assayName, studyName, processNameRoo
   }
   return (table_6) => (i_6) => {
     const pn = table_6.RowCount === 1 ? processNameRoot : ProcessConversion_composeProcessName(processNameRoot, i_6);
-    const paramvalues = map((collection_4) => Array.from(collection_4), Option_fromValueWithDefault(empty(), map$1((f_4) => f_4(table_6)(i_6), parameterValueGetters)));
-    const comments = map((collection_5) => Array.from(collection_5), Option_fromValueWithDefault(empty(), map$1((f_5) => f_5(table_6)(i_6), commentGetters)));
-    const components = map((collection_6) => Array.from(collection_6), Option_fromValueWithDefault(empty(), map$1((f_6) => f_6(table_6)(i_6), componentGetters)));
+    const paramvalues = map((collection_4) => Array.from(collection_4), Option_fromValueWithDefault(empty(), map$3((f_4) => f_4(table_6)(i_6), parameterValueGetters)));
+    const comments = map((collection_5) => Array.from(collection_5), Option_fromValueWithDefault(empty(), map$3((f_5) => f_5(table_6)(i_6), commentGetters)));
+    const components = map((collection_6) => Array.from(collection_6), Option_fromValueWithDefault(empty(), map$3((f_6) => f_6(table_6)(i_6), componentGetters)));
     const id = LDLabProcess.genId(processNameRoot, unwrap(assayName), unwrap(studyName)) + `_${i_6}`;
     let protocol;
     const name = map((f_7) => f_7(table_6)(i_6), protocolREFGetter);
@@ -860,18 +902,18 @@ function ProcessConversion_processToRows_Z6839B9E8(p, graph, context) {
     const prot_1 = value(matchValue_1);
     protVals = toList(delay(() => {
       let matchValue_2;
-      return append((matchValue_2 = LDLabProtocol.tryGetNameAsString(prot_1, unwrap(context)), matchValue_2 == null ? empty$1() : singleton$1([CompositeHeader_ProtocolREF(), CompositeCell_FreeText(value(matchValue_2))])), delay(() => {
+      return append((matchValue_2 = LDLabProtocol.tryGetNameAsString(prot_1, unwrap(context)), matchValue_2 == null ? empty$1() : singleton([CompositeHeader_ProtocolREF(), CompositeCell_FreeText(value(matchValue_2))])), delay(() => {
         let matchValue_3;
-        return append((matchValue_3 = LDLabProtocol.tryGetDescriptionAsString(prot_1, unwrap(context)), matchValue_3 == null ? empty$1() : singleton$1([CompositeHeader_ProtocolDescription(), CompositeCell_FreeText(value(matchValue_3))])), delay(() => {
+        return append((matchValue_3 = LDLabProtocol.tryGetDescriptionAsString(prot_1, unwrap(context)), matchValue_3 == null ? empty$1() : singleton([CompositeHeader_ProtocolDescription(), CompositeCell_FreeText(value(matchValue_3))])), delay(() => {
           let matchValue_4;
-          return append((matchValue_4 = LDLabProtocol.tryGetUrl(prot_1, unwrap(context)), matchValue_4 == null ? empty$1() : singleton$1([CompositeHeader_ProtocolUri(), CompositeCell_FreeText(value(matchValue_4))])), delay(() => {
+          return append((matchValue_4 = LDLabProtocol.tryGetUrl(prot_1, unwrap(context)), matchValue_4 == null ? empty$1() : singleton([CompositeHeader_ProtocolUri(), CompositeCell_FreeText(value(matchValue_4))])), delay(() => {
             let matchValue_5;
-            return append((matchValue_5 = LDLabProtocol.tryGetVersionAsString(prot_1, unwrap(context)), matchValue_5 == null ? empty$1() : singleton$1([CompositeHeader_ProtocolVersion(), CompositeCell_FreeText(value(matchValue_5))])), delay(() => {
+            return append((matchValue_5 = LDLabProtocol.tryGetVersionAsString(prot_1, unwrap(context)), matchValue_5 == null ? empty$1() : singleton([CompositeHeader_ProtocolVersion(), CompositeCell_FreeText(value(matchValue_5))])), delay(() => {
               const matchValue_6 = ProcessConversion_tryGetProtocolType_Z6839B9E8(prot_1, unwrap(graph), unwrap(context));
               if (matchValue_6 == null) {
                 return empty$1();
               } else {
-                return singleton$1([CompositeHeader_ProtocolType(), CompositeCell_Term(value(matchValue_6))]);
+                return singleton([CompositeHeader_ProtocolType(), CompositeCell_Term(value(matchValue_6))]);
               }
             }));
           }));
@@ -889,7 +931,7 @@ function ProcessConversion_processToRows_Z6839B9E8(p, graph, context) {
   const outputs_1 = patternInput[1];
   const inputs_1 = patternInput[0];
   if (inputs_1.length === 0 && outputs_1.length === 0) {
-    const vals = map$1((tuple_1) => tuple_1[0], sortBy((arg) => defaultArg(arg[1], 1e4), toList(delay(() => append(components, delay(() => pvs)))), {
+    const vals = map$3((tuple_1) => tuple_1[0], sortBy((arg) => defaultArg(arg[1], 1e4), toList(delay(() => append(components, delay(() => pvs)))), {
       Compare: comparePrimitives
     }));
     return ResizeArray_singleton(toList(delay(() => append(protVals, delay(() => append(vals, delay(() => comments)))))));
@@ -911,37 +953,219 @@ function ProcessConversion_processToRows_Z6839B9E8(p, graph, context) {
         const o_1 = value(o);
         factors = ResizeArray_map((fv) => [BaseTypes_decomposeFactorValue_Z2F770004(fv, unwrap(context)), ColumnIndex_tryGetIndex(fv)], LDSample.getFactors(o_1, unwrap(graph), unwrap(context)));
       }
-      const vals_1 = map$1((tuple_3) => tuple_3[0], sortBy((arg_1) => defaultArg(arg_1[1], 1e4), toList(delay(() => append(chars, delay(() => append(components, delay(() => append(pvs, delay(() => factors)))))))), {
+      const vals_1 = map$3((tuple_3) => tuple_3[0], sortBy((arg_1) => defaultArg(arg_1[1], 1e4), toList(delay(() => append(chars, delay(() => append(components, delay(() => append(pvs, delay(() => factors)))))))), {
         Compare: comparePrimitives
       }));
-      return toList(delay(() => append(i != null ? singleton$1(BaseTypes_decomposeProcessInput_Z2F770004(value(i), unwrap(context))) : empty$1(), delay(() => append(protVals, delay(() => append(vals_1, delay(() => append(comments, delay(() => o != null ? singleton$1(BaseTypes_decomposeProcessOutput_Z2F770004(value(o), unwrap(context))) : empty$1()))))))))));
+      return toList(delay(() => append(i != null ? singleton(BaseTypes_decomposeProcessInput_Z2F770004(value(i), unwrap(context))) : empty$1(), delay(() => append(protVals, delay(() => append(vals_1, delay(() => append(comments, delay(() => o != null ? singleton(BaseTypes_decomposeProcessOutput_Z2F770004(value(o), unwrap(context))) : empty$1()))))))))));
     }, ResizeArray_zip(inputs_1, outputs_1));
   }
 }
+function CompositeRow_toProtocol(tableName, row) {
+  return fold((p, hc) => {
+    let matchResult, oa, v, v_1, v_2, v_3;
+    switch (hc[0].tag) {
+      case /* ProtocolType */
+      4: {
+        if (hc[1].tag === /* Term */
+        0) {
+          matchResult = 0;
+          oa = hc[1].fields[0];
+        } else {
+          matchResult = 6;
+        }
+        break;
+      }
+      case /* ProtocolVersion */
+      7: {
+        if (hc[1].tag === /* FreeText */
+        1) {
+          matchResult = 1;
+          v = hc[1].fields[0];
+        } else {
+          matchResult = 6;
+        }
+        break;
+      }
+      case /* ProtocolUri */
+      6: {
+        if (hc[1].tag === /* FreeText */
+        1) {
+          matchResult = 2;
+          v_1 = hc[1].fields[0];
+        } else {
+          matchResult = 6;
+        }
+        break;
+      }
+      case /* ProtocolDescription */
+      5: {
+        if (hc[1].tag === /* FreeText */
+        1) {
+          matchResult = 3;
+          v_2 = hc[1].fields[0];
+        } else {
+          matchResult = 6;
+        }
+        break;
+      }
+      case /* ProtocolREF */
+      8: {
+        if (hc[1].tag === /* FreeText */
+        1) {
+          matchResult = 4;
+          v_3 = hc[1].fields[0];
+        } else {
+          matchResult = 6;
+        }
+        break;
+      }
+      case /* Component */
+      0: {
+        switch (hc[1].tag) {
+          case /* Term */
+          0:
+          case /* Unitized */
+          2: {
+            matchResult = 5;
+            break;
+          }
+          default:
+            matchResult = 6;
+        }
+        break;
+      }
+      default:
+        matchResult = 6;
+    }
+    switch (matchResult) {
+      case 0: {
+        LDLabProtocol.setIntendedUseAsDefinedTerm(p, BaseTypes_composeDefinedTerm_ZDED3A0F(oa));
+        break;
+      }
+      case 1: {
+        LDLabProtocol.setVersionAsString(p, v);
+        break;
+      }
+      case 2: {
+        LDLabProtocol.setUrl(p, v_1);
+        break;
+      }
+      case 3: {
+        LDLabProtocol.setDescriptionAsString(p, v_2);
+        break;
+      }
+      case 4: {
+        LDLabProtocol.setNameAsString(p, v_3);
+        break;
+      }
+      case 5: {
+        const newC = ResizeArray_appendSingleton(BaseTypes_composeComponent(hc[0], hc[1]), LDLabProtocol.getLabEquipments(p));
+        LDLabProtocol.setLabEquipments(p, newC);
+        break;
+      }
+    }
+    return p;
+  }, LDLabProtocol.create(tableName, tableName), row);
+}
+function ARCtrl_ArcTable__ArcTable_fromProtocol_Static_Z6839B9E8(p, graph, context) {
+  const name = LDLabProtocol.getNameAsString(p, unwrap(context));
+  const t = ArcTable.init(name);
+  let enumerator = getEnumerator(LDLabProtocol.getComponents(p, unwrap(graph), unwrap(context)));
+  try {
+    while (enumerator["System.Collections.IEnumerator.MoveNext"]()) {
+      const c = enumerator["System.Collections.Generic.IEnumerator`1.get_Current"]();
+      const patternInput = BaseTypes_decomposeComponent_Z2F770004(c, unwrap(context));
+      t.AddColumn(patternInput[0], ResizeArray_singleton(patternInput[1]), unwrap(ARCtrl_ROCrate_LDNode__LDNode_TryGetColumnIndex(c)));
+    }
+  } finally {
+    disposeSafe(enumerator);
+  }
+  map((d) => {
+    t.AddProtocolDescriptionColumn(ResizeArray_singleton(d));
+  }, LDLabProtocol.tryGetDescriptionAsString(p, unwrap(context)));
+  map((d_1) => {
+    t.AddProtocolVersionColumn(ResizeArray_singleton(d_1));
+  }, LDLabProtocol.tryGetVersionAsString(p, unwrap(context)));
+  map((d_2) => {
+    t.AddProtocolTypeColumn(ResizeArray_singleton(d_2));
+  }, ProcessConversion_tryGetProtocolType_Z6839B9E8(p, void 0, unwrap(context)));
+  map((d_3) => {
+    t.AddProtocolUriColumn(ResizeArray_singleton(d_3));
+  }, LDLabProtocol.tryGetUrl(p, unwrap(context)));
+  t.AddProtocolNameColumn(ResizeArray_singleton(name));
+  return t;
+}
+function ARCtrl_ArcTable__ArcTable_GetProtocols(this$) {
+  let source;
+  if (this$.RowCount === 0) {
+    return singleton$1((source = this$.Headers, fold((p, h) => {
+      if (h.tag === /* Component */
+      0) {
+        const oa = h.fields[0];
+        const matchValue = oa.NameText;
+        const matchValue_1 = oa.TermAccessionOntobeeUrl;
+        const newC = ResizeArray_appendSingleton(LDPropertyValue.createComponent(matchValue, "Empty Component Value", void 0, matchValue_1), LDLabProtocol.getLabEquipments(p));
+        LDLabProtocol.setLabEquipments(p, newC);
+      }
+      return p;
+    }, LDLabProtocol.create(createMissingIdentifier(), this$.Name), source)));
+  } else {
+    return List_distinct(initialize(this$.RowCount, (i) => {
+      let row;
+      const source_2 = this$.GetRow(i, true);
+      row = zip(this$.Headers, source_2);
+      return CompositeRow_toProtocol(this$.Name, row);
+    }), {
+      Equals: equals,
+      GetHashCode: safeHash
+    });
+  }
+}
 function ARCtrl_ArcTable__ArcTable_GetProcesses_5E660E5C(this$, assayName, studyName, fs) {
   if (this$.RowCount === 0) {
-    return singleton(LDLabProcess.create(this$.Name));
+    return singleton$1(LDLabProcess.create(this$.Name));
   } else {
     const getter = ProcessConversion_getProcessGetter(assayName, studyName, this$.Name, this$.Headers, fs);
     return toList(delay(() => map$2((i) => getter(this$)(i), rangeDouble(0, 1, this$.RowCount - 1))));
   }
 }
+function ARCtrl_ArcTable__ArcTable_fromProcesses_Static_Z3575FB5F(name, ps, graph, context) {
+  const tupledArg = Unchecked_alignByHeaders(true, collect((p) => ofSeq(ProcessConversion_processToRows_Z6839B9E8(p, unwrap(graph), unwrap(context))), ps));
+  return ArcTable.fromArcTableValues(name, tupledArg[0], tupledArg[1]);
+}
 function ARCtrl_ArcTables__ArcTables_GetProcesses_5E660E5C(this$, assayName, studyName, fs) {
   return collect((t) => ARCtrl_ArcTable__ArcTable_GetProcesses_5E660E5C(t, unwrap(assayName), unwrap(studyName), unwrap(fs)), toList(this$.Tables));
 }
 function ARCtrl_ArcTables__ArcTables_fromProcesses_Static_Z27F0B586(ps, graph, context) {
   let collection;
-  return new ArcTables((collection = map$1((tupledArg) => {
+  return new ArcTables((collection = map$3((tupledArg) => {
     const tupledArg_1 = Unchecked_alignByHeaders(true, collect((p) => ofSeq(ProcessConversion_processToRows_Z6839B9E8(p, unwrap(graph), unwrap(context))), tupledArg[1]));
     return ArcTable.fromArcTableValues(tupledArg[0], tupledArg_1[0], tupledArg_1[1]);
   }, ProcessConversion_groupProcesses_Z27F0B586(ps, unwrap(graph), unwrap(context))), Array.from(collection)));
 }
+class DatamapConversion {
+  constructor() {
+  }
+}
+function DatamapConversion_$reflection() {
+  return class_type("ARCtrl.Conversion.DatamapConversion", void 0, DatamapConversion);
+}
 function DatamapConversion_composeFragmentDescriptors_Z8923FA3(datamap) {
   return ResizeArray_map(BaseTypes_composeFragmentDescriptor_Z4C0BEF62, DataMap__get_DataContexts(datamap));
 }
 function DatamapConversion_decomposeFragmentDescriptors_Z6E59645F(fragmentDescriptors, graph, context) {
   return DataMap_$ctor_4E3220A7(ResizeArray_map((fd) => BaseTypes_decomposeFragmentDescriptor_Z6839B9E8(fd, unwrap(graph), unwrap(context)), fragmentDescriptors));
 }
+class PersonConversion {
+  constructor() {
+  }
+}
+function PersonConversion_$reflection() {
+  return class_type("ARCtrl.Conversion.PersonConversion", void 0, PersonConversion);
+}
+function PersonConversion_get_orcidKey() {
+  return "ORCID";
+}
 function PersonConversion_composeAffiliation_Z721C83C5(affiliation) {
   let arg;
   try {
@@ -960,7 +1184,7 @@ function PersonConversion_decomposeAffiliation_Z2F770004(affiliation, context) {
   if (isEmpty(filter((n) => n !== LDOrganization.name, affiliation.GetPropertyNames(unwrap(context))))) {
     return LDOrganization.getNameAsString(affiliation, unwrap(context));
   } else {
-    return toString$1(0, encoder(affiliation));
+    return toString(0, encoder(affiliation));
   }
 }
 function PersonConversion_composeAddress_Z721C83C5(address) {
@@ -979,7 +1203,7 @@ function PersonConversion_decomposeAddress_4E60E31B(address) {
   if (typeof address === "string") {
     return address;
   } else if (address instanceof LDNode) {
-    return toString$1(0, encoder(address));
+    return toString(0, encoder(address));
   } else {
     throw new Error("Address must be a string or a Json.LDNode");
   }
@@ -993,7 +1217,7 @@ function PersonConversion_composePerson_Z64D846DC(person) {
     givenName = value(matchValue);
   }
   const jobTitles = Option_fromSeq(ResizeArray_map(BaseTypes_composeDefinedTerm_ZDED3A0F, person.Roles));
-  const disambiguatingDescriptions = Option_fromSeq(ResizeArray_map(toString, person.Comments));
+  const disambiguatingDescriptions = Option_fromSeq(ResizeArray_map(toString$1, person.Comments));
   const address_1 = map(PersonConversion_composeAddress_Z721C83C5, person.Address);
   const affiliation_1 = map(PersonConversion_composeAffiliation_Z721C83C5, person.Affiliation);
   return LDPerson.create(givenName, unwrap(person.ORCID), void 0, unwrap(affiliation_1), unwrap(person.EMail), unwrap(person.LastName), void 0, unwrap(jobTitles), unwrap(person.MidInitials), address_1, unwrap(disambiguatingDescriptions), unwrap(person.Fax), unwrap(person.Phone));
@@ -1013,6 +1237,13 @@ function PersonConversion_decomposePerson_Z6839B9E8(person, graph, context) {
   const affiliation = map((a_3) => PersonConversion_decomposeAffiliation_Z2F770004(a_3, unwrap(context)), LDPerson.tryGetAffiliation(person, unwrap(graph), unwrap(context)));
   return Person.create(unwrap(orcid), unwrap(LDPerson.tryGetFamilyNameAsString(person, unwrap(context))), LDPerson.getGivenNameAsString(person, unwrap(context)), unwrap(LDPerson.tryGetAdditionalNameAsString(person, unwrap(context))), unwrap(LDPerson.tryGetEmailAsString(person, unwrap(context))), unwrap(LDPerson.tryGetTelephoneAsString(person, unwrap(context))), unwrap(LDPerson.tryGetFaxNumberAsString(person, unwrap(context))), unwrap(address), unwrap(affiliation), roles, comments);
 }
+class ScholarlyArticleConversion {
+  constructor() {
+  }
+}
+function ScholarlyArticleConversion_$reflection() {
+  return class_type("ARCtrl.Conversion.ScholarlyArticleConversion", void 0, ScholarlyArticleConversion);
+}
 function ScholarlyArticleConversion_composeAuthor_Z721C83C5(author) {
   let arg;
   try {
@@ -1048,7 +1279,7 @@ function ScholarlyArticleConversion_splitAuthors_Z721C83C5(a) {
         }
         default:
           if (c === "," && bracketCount === 0) {
-            void authors.push(toString(sb));
+            void authors.push(toString$1(sb));
             StringBuilder__Clear(sb);
           } else {
             StringBuilder__Append_244C7CD6(sb, c);
@@ -1058,7 +1289,7 @@ function ScholarlyArticleConversion_splitAuthors_Z721C83C5(a) {
   } finally {
     disposeSafe(enumerator);
   }
-  void authors.push(toString(sb));
+  void authors.push(toString$1(sb));
   return authors;
 }
 function ScholarlyArticleConversion_composeAuthors_Z721C83C5(authors) {
@@ -1069,7 +1300,7 @@ function ScholarlyArticleConversion_decomposeAuthor_Z2F770004(author, context) {
   if (isEmpty(filter((n) => n !== LDPerson.givenName, author.GetPropertyNames(unwrap(context))))) {
     return LDPerson.getGivenNameAsString(author, unwrap(context));
   } else {
-    return toString$1(0, encoder(author));
+    return toString(0, encoder(author));
   }
 }
 function ScholarlyArticleConversion_decomposeAuthors_1AAAE9A5(authors, context) {
@@ -1085,7 +1316,7 @@ function ScholarlyArticleConversion_composeScholarlyArticle_D324A6D(publication)
   }
   const authors_1 = map(ScholarlyArticleConversion_composeAuthors_Z721C83C5, publication.Authors);
   const comments = Option_fromSeq(ResizeArray_map(BaseTypes_composeComment_Z13201A7E, publication.Comments));
-  const identifiers = Array.from(toList(delay(() => append(publication.DOI != null && value(publication.DOI) !== "" ? singleton$1(LDPropertyValue.createDOI(value(publication.DOI))) : empty$1(), delay(() => publication.PubMedID != null && value(publication.PubMedID) !== "" ? singleton$1(LDPropertyValue.createPubMedID(value(publication.PubMedID))) : empty$1())))));
+  const identifiers = Array.from(toList(delay(() => append(publication.DOI != null && value(publication.DOI) !== "" ? singleton(LDPropertyValue.createDOI(value(publication.DOI))) : empty$1(), delay(() => publication.PubMedID != null && value(publication.PubMedID) !== "" ? singleton(LDPropertyValue.createPubMedID(value(publication.PubMedID))) : empty$1())))));
   const status = map(BaseTypes_composeDefinedTerm_ZDED3A0F, publication.Status);
   return LDScholarlyArticle.create(title, identifiers, void 0, unwrap(authors_1), void 0, unwrap(status), unwrap(comments));
 }
@@ -1103,6 +1334,13 @@ function ScholarlyArticleConversion_decomposeScholarlyArticle_Z6839B9E8(sa, grap
   pubMedID = _arg_1 == null ? LDScholarlyArticle.tryGetUrlAsString(sa, unwrap(context)) : value(_arg_1);
   return Publication.create(unwrap(pubMedID), unwrap(doi), unwrap(authors), title, unwrap(status), comments);
 }
+class AssayConversion {
+  constructor() {
+  }
+}
+function AssayConversion_$reflection() {
+  return class_type("ARCtrl.Conversion.AssayConversion", void 0, AssayConversion);
+}
 function AssayConversion_getDataFilesFromProcesses_6BABD1B0(processes, fragmentDescriptors, graph, context) {
   const data = ResizeArray_distinct(ResizeArray_append(ResizeArray_choose((df) => LDPropertyValue.tryGetSubjectOf(df, unwrap(graph), unwrap(context)), defaultArg(fragmentDescriptors, [])), ResizeArray_collect((p) => ResizeArray_append(LDLabProcess.getObjectsAsData(p, unwrap(graph), unwrap(context)), LDLabProcess.getResultsAsData(p, unwrap(graph), unwrap(context))), processes)));
   const files = ResizeArray_filter((d) => DataAux_pathAndSelectorFromName(d.Id)[1] == null, data);
@@ -1146,6 +1384,13 @@ function AssayConversion_decomposeAssay_Z6839B9E8(assay, graph, context) {
   const comments = ResizeArray_map((c_1) => BaseTypes_decomposeComment_Z2F770004(c_1, unwrap(context)), LDDataset.getComments(assay, unwrap(graph), unwrap(context)));
   return ArcAssay.create(LDDataset.getIdentifierAsString(assay, unwrap(context)), unwrap(LDDataset.tryGetNameAsString(assay, unwrap(context))), unwrap(LDDataset.tryGetDescriptionAsString(assay, unwrap(context))), unwrap(variableMeasured), unwrap(measurementMethod), unwrap(measurementTechnique), tables.Tables, unwrap(dataMap), perfomers, comments);
 }
+class StudyConversion {
+  constructor() {
+  }
+}
+function StudyConversion_$reflection() {
+  return class_type("ARCtrl.Conversion.StudyConversion", void 0, StudyConversion);
+}
 function StudyConversion_composeStudy_ZFE0E38E(study, fs) {
   let collection;
   const dateCreated = bind(DateTime_tryFromString, study.SubmissionDate);
@@ -1171,6 +1416,13 @@ function StudyConversion_decomposeStudy_Z6839B9E8(study, graph, context) {
   const comments = ResizeArray_map((c_1) => BaseTypes_decomposeComment_Z2F770004(c_1, unwrap(context)), LDDataset.getComments(study, unwrap(graph), unwrap(context)));
   return ArcStudy.create(LDDataset.getIdentifierAsString(study, unwrap(context)), unwrap(LDDataset.tryGetNameAsString(study, unwrap(context))), unwrap(LDDataset.tryGetDescriptionAsString(study, unwrap(context))), unwrap(dateCreated), unwrap(datePublished), publications, creators, void 0, tables.Tables, unwrap(dataMap), void 0, comments);
 }
+class InvestigationConversion {
+  constructor() {
+  }
+}
+function InvestigationConversion_$reflection() {
+  return class_type("ARCtrl.Conversion.InvestigationConversion", void 0, InvestigationConversion);
+}
 function InvestigationConversion_composeInvestigation_5AEC717D(investigation, fs) {
   let b;
   let name;
@@ -1243,5 +1495,26 @@ class TypeExtensions_Conversion {
     return ARCtrl_ArcInvestigation__ArcInvestigation_fromROCrateInvestigation_Static_Z6839B9E8(a, unwrap(graph), unwrap(context));
   }
 }
+function TypeExtensions_Conversion_$reflection() {
+  return class_type("ARCtrl.Conversion.TypeExtensions.Conversion", void 0, TypeExtensions_Conversion);
+}
+function ARCtrl_ROCrate_Dataset__Dataset_toArcAssay_Static_Z6839B9E8(a, graph, context) {
+  return AssayConversion_decomposeAssay_Z6839B9E8(a, unwrap(graph), unwrap(context));
+}
+function ARCtrl_ROCrate_Dataset__Dataset_fromArcAssay_Static_1501C0F8(a) {
+  return AssayConversion_composeAssay_Z5C53FD5C(a);
+}
+function ARCtrl_ROCrate_Dataset__Dataset_toArcStudy_Static_Z6839B9E8(a, graph, context) {
+  return StudyConversion_decomposeStudy_Z6839B9E8(a, unwrap(graph), unwrap(context));
+}
+function ARCtrl_ROCrate_Dataset__Dataset_fromArcStudy_Static_1680536E(a) {
+  return StudyConversion_composeStudy_ZFE0E38E(a);
+}
+function ARCtrl_ROCrate_Dataset__Dataset_toArcInvestigation_Static_Z6839B9E8(a, graph, context) {
+  return InvestigationConversion_decomposeInvestigation_Z6839B9E8(a, unwrap(graph), unwrap(context));
+}
+function ARCtrl_ROCrate_Dataset__Dataset_fromArcInvestigation_Static_Z720BD3FF(a) {
+  return InvestigationConversion_composeInvestigation_5AEC717D(a);
+}
 
-export { ARCtrl_ArcAssay__ArcAssay_ToROCrateAssay_1695DD5C, ARCtrl_ArcAssay__ArcAssay_fromROCrateAssay_Static_Z6839B9E8, ARCtrl_ArcInvestigation__ArcInvestigation_ToROCrateInvestigation_1695DD5C, ARCtrl_ArcInvestigation__ArcInvestigation_fromROCrateInvestigation_Static_Z6839B9E8, ARCtrl_ArcStudy__ArcStudy_ToROCrateStudy_1695DD5C, ARCtrl_ArcStudy__ArcStudy_fromROCrateStudy_Static_Z6839B9E8, ARCtrl_ArcTable__ArcTable_GetProcesses_5E660E5C, ARCtrl_ArcTables__ArcTables_GetProcesses_5E660E5C, ARCtrl_ArcTables__ArcTables_fromProcesses_Static_Z27F0B586, ARCtrl_ROCrate_LDNode__LDNode_SetColumnIndex_Z524259A4, AssayConversion_composeAssay_Z5C53FD5C, AssayConversion_decomposeAssay_Z6839B9E8, AssayConversion_getDataFilesFromProcesses_6BABD1B0, BaseTypes_cellOfPropertyValue_Z2F770004, BaseTypes_composeCharacteristicValue, BaseTypes_composeComment_Z13201A7E, BaseTypes_composeComponent, BaseTypes_composeDefinedTerm_ZDED3A0F, BaseTypes_composeFactorValue, BaseTypes_composeFile_6CE21C7D, BaseTypes_composeFragmentDescriptor_Z4C0BEF62, BaseTypes_composeFreetextMaterialName, BaseTypes_composeParameterValue, BaseTypes_composeProcessInput, BaseTypes_composeProcessOutput, BaseTypes_composePropertyValueFromOA_ZDED3A0F, BaseTypes_decomposeCharacteristicValue_Z2F770004, BaseTypes_decomposeComment_Z2F770004, BaseTypes_decomposeComponent_Z2F770004, BaseTypes_decomposeDefinedTerm_Z2F770004, BaseTypes_decomposeFactorValue_Z2F770004, BaseTypes_decomposeFile_Z2F770004, BaseTypes_decomposeFragmentDescriptor_Z6839B9E8, BaseTypes_decomposeParameterValue_Z2F770004, BaseTypes_decomposeProcessInput_Z2F770004, BaseTypes_decomposeProcessOutput_Z2F770004, BaseTypes_decomposePropertyValueToOA_Z2F770004, BaseTypes_headerOntologyOfPropertyValue_Z2F770004, BaseTypes_ontologyTermFromNameAndID_40457300, BaseTypes_termOfHeader_6CAF647B, BaseTypes_tryOntologyTermFromNameAndID_40457300, BaseTypes_valuesOfCell_Z436420FE, ColumnIndex_orderName, ColumnIndex_setIndex, ColumnIndex_tryGetIndex, DatamapConversion_composeFragmentDescriptors_Z8923FA3, DatamapConversion_decomposeFragmentDescriptors_Z6E59645F, DateTime_toString, DateTime_tryFromString, InvestigationConversion_composeInvestigation_5AEC717D, InvestigationConversion_decomposeInvestigation_Z6839B9E8, PersonConversion_composeAddress_Z721C83C5, PersonConversion_composeAffiliation_Z721C83C5, PersonConversion_composePerson_Z64D846DC, PersonConversion_decomposeAddress_4E60E31B, PersonConversion_decomposeAffiliation_Z2F770004, PersonConversion_decomposePerson_Z6839B9E8, ProcessConversion_composeProcessName, ProcessConversion_decomposeProcessName_Z721C83C5, ProcessConversion_getProcessGetter, ProcessConversion_groupProcesses_Z27F0B586, ProcessConversion_processToRows_Z6839B9E8, ProcessConversion_tryCharacteristicGetter, ProcessConversion_tryComponentGetter, ProcessConversion_tryFactorGetter, ProcessConversion_tryGetCommentGetter, ProcessConversion_tryGetInputGetter, ProcessConversion_tryGetOutputGetter, ProcessConversion_tryGetPerformerGetter, ProcessConversion_tryGetProtocolDescriptionGetter, ProcessConversion_tryGetProtocolREFGetter, ProcessConversion_tryGetProtocolTypeGetter, ProcessConversion_tryGetProtocolType_Z6839B9E8, ProcessConversion_tryGetProtocolURIGetter, ProcessConversion_tryGetProtocolVersionGetter, ProcessConversion_tryParameterGetter, ScholarlyArticleConversion_composeAuthor_Z721C83C5, ScholarlyArticleConversion_composeAuthors_Z721C83C5, ScholarlyArticleConversion_composeScholarlyArticle_D324A6D, ScholarlyArticleConversion_decomposeAuthor_Z2F770004, ScholarlyArticleConversion_decomposeAuthors_1AAAE9A5, ScholarlyArticleConversion_decomposeScholarlyArticle_Z6839B9E8, ScholarlyArticleConversion_splitAuthors_Z721C83C5, StudyConversion_composeStudy_ZFE0E38E, StudyConversion_decomposeStudy_Z6839B9E8, TypeExtensions_Conversion };
+export { ARCtrl_ArcAssay__ArcAssay_ToROCrateAssay_1695DD5C, ARCtrl_ArcAssay__ArcAssay_fromROCrateAssay_Static_Z6839B9E8, ARCtrl_ArcInvestigation__ArcInvestigation_ToROCrateInvestigation_1695DD5C, ARCtrl_ArcInvestigation__ArcInvestigation_fromROCrateInvestigation_Static_Z6839B9E8, ARCtrl_ArcStudy__ArcStudy_ToROCrateStudy_1695DD5C, ARCtrl_ArcStudy__ArcStudy_fromROCrateStudy_Static_Z6839B9E8, ARCtrl_ArcTable__ArcTable_GetProcesses_5E660E5C, ARCtrl_ArcTable__ArcTable_GetProtocols, ARCtrl_ArcTable__ArcTable_fromProcesses_Static_Z3575FB5F, ARCtrl_ArcTable__ArcTable_fromProtocol_Static_Z6839B9E8, ARCtrl_ArcTables__ArcTables_GetProcesses_5E660E5C, ARCtrl_ArcTables__ArcTables_fromProcesses_Static_Z27F0B586, ARCtrl_ROCrate_Dataset__Dataset_fromArcAssay_Static_1501C0F8, ARCtrl_ROCrate_Dataset__Dataset_fromArcInvestigation_Static_Z720BD3FF, ARCtrl_ROCrate_Dataset__Dataset_fromArcStudy_Static_1680536E, ARCtrl_ROCrate_Dataset__Dataset_toArcAssay_Static_Z6839B9E8, ARCtrl_ROCrate_Dataset__Dataset_toArcInvestigation_Static_Z6839B9E8, ARCtrl_ROCrate_Dataset__Dataset_toArcStudy_Static_Z6839B9E8, ARCtrl_ROCrate_LDNode__LDNode_GetColumnIndex, ARCtrl_ROCrate_LDNode__LDNode_SetColumnIndex_Z524259A4, ARCtrl_ROCrate_LDNode__LDNode_TryGetColumnIndex, AssayConversion, AssayConversion_$reflection, AssayConversion_composeAssay_Z5C53FD5C, AssayConversion_decomposeAssay_Z6839B9E8, AssayConversion_getDataFilesFromProcesses_6BABD1B0, BaseTypes, BaseTypes_$reflection, BaseTypes_cellOfPropertyValue_Z2F770004, BaseTypes_composeCharacteristicValue, BaseTypes_composeComment_Z13201A7E, BaseTypes_composeComponent, BaseTypes_composeDefinedTerm_ZDED3A0F, BaseTypes_composeFactorValue, BaseTypes_composeFile_6CE21C7D, BaseTypes_composeFragmentDescriptor_Z4C0BEF62, BaseTypes_composeFreetextMaterialName, BaseTypes_composeParameterValue, BaseTypes_composeProcessInput, BaseTypes_composeProcessOutput, BaseTypes_composePropertyValueFromOA_ZDED3A0F, BaseTypes_composeTechnologyPlatform_ZDED3A0F, BaseTypes_decomposeCharacteristicValue_Z2F770004, BaseTypes_decomposeComment_Z2F770004, BaseTypes_decomposeComponent_Z2F770004, BaseTypes_decomposeDefinedTerm_Z2F770004, BaseTypes_decomposeFactorValue_Z2F770004, BaseTypes_decomposeFile_Z2F770004, BaseTypes_decomposeFragmentDescriptor_Z6839B9E8, BaseTypes_decomposeParameterValue_Z2F770004, BaseTypes_decomposeProcessInput_Z2F770004, BaseTypes_decomposeProcessOutput_Z2F770004, BaseTypes_decomposePropertyValueToOA_Z2F770004, BaseTypes_decomposeTechnologyPlatform_Z721C83C5, BaseTypes_headerOntologyOfPropertyValue_Z2F770004, BaseTypes_ontologyTermFromNameAndID_40457300, BaseTypes_termOfHeader_6CAF647B, BaseTypes_tryOntologyTermFromNameAndID_40457300, BaseTypes_valuesOfCell_Z436420FE, ColumnIndex_orderName, ColumnIndex_setIndex, ColumnIndex_tryGetIndex, CompositeRow_toProtocol, DatamapConversion, DatamapConversion_$reflection, DatamapConversion_composeFragmentDescriptors_Z8923FA3, DatamapConversion_decomposeFragmentDescriptors_Z6E59645F, DateTime_toString, DateTime_tryFromString, InvestigationConversion, InvestigationConversion_$reflection, InvestigationConversion_composeInvestigation_5AEC717D, InvestigationConversion_decomposeInvestigation_Z6839B9E8, PersonConversion, PersonConversion_$reflection, PersonConversion_composeAddress_Z721C83C5, PersonConversion_composeAffiliation_Z721C83C5, PersonConversion_composePerson_Z64D846DC, PersonConversion_decomposeAddress_4E60E31B, PersonConversion_decomposeAffiliation_Z2F770004, PersonConversion_decomposePerson_Z6839B9E8, PersonConversion_get_orcidKey, ProcessConversion, ProcessConversion_$reflection, ProcessConversion_composeProcessName, ProcessConversion_decomposeProcessName_Z721C83C5, ProcessConversion_getProcessGetter, ProcessConversion_groupProcesses_Z27F0B586, ProcessConversion_processToRows_Z6839B9E8, ProcessConversion_tryCharacteristicGetter, ProcessConversion_tryComponentGetter, ProcessConversion_tryFactorGetter, ProcessConversion_tryGetCommentGetter, ProcessConversion_tryGetInputGetter, ProcessConversion_tryGetOutputGetter, ProcessConversion_tryGetPerformerGetter, ProcessConversion_tryGetProtocolDescriptionGetter, ProcessConversion_tryGetProtocolREFGetter, ProcessConversion_tryGetProtocolTypeGetter, ProcessConversion_tryGetProtocolType_Z6839B9E8, ProcessConversion_tryGetProtocolURIGetter, ProcessConversion_tryGetProtocolVersionGetter, ProcessConversion_tryParameterGetter, ScholarlyArticleConversion, ScholarlyArticleConversion_$reflection, ScholarlyArticleConversion_composeAuthor_Z721C83C5, ScholarlyArticleConversion_composeAuthors_Z721C83C5, ScholarlyArticleConversion_composeScholarlyArticle_D324A6D, ScholarlyArticleConversion_decomposeAuthor_Z2F770004, ScholarlyArticleConversion_decomposeAuthors_1AAAE9A5, ScholarlyArticleConversion_decomposeScholarlyArticle_Z6839B9E8, ScholarlyArticleConversion_splitAuthors_Z721C83C5, StudyConversion, StudyConversion_$reflection, StudyConversion_composeStudy_ZFE0E38E, StudyConversion_decomposeStudy_Z6839B9E8, TypeExtensions_Conversion, TypeExtensions_Conversion_$reflection };