@morscherlab/mint-sdk 1.2.10 → 1.3.0-beta.10

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (841) hide show
  1. package/README.md +45 -137
  2. package/dist/ResourcePickerListInternal-CFAw4vTZ.js +605 -0
  3. package/dist/ResourcePickerListInternal-CFAw4vTZ.js.map +1 -0
  4. package/dist/__stories__/experiment-helpers.d.ts +12 -1
  5. package/dist/__tests__/components/ScientificNumber.test.d.ts +1 -0
  6. package/dist/__tests__/components/SequenceInput.test.d.ts +1 -0
  7. package/dist/__tests__/components/Skeleton.test.d.ts +1 -0
  8. package/dist/__tests__/components/SmartGroupFieldRecipe.test.d.ts +1 -0
  9. package/dist/__tests__/components/SmartGroupModal.test.d.ts +1 -0
  10. package/dist/__tests__/components/StepWizard.test.d.ts +1 -0
  11. package/dist/__tests__/components/TimeRangeInput.test.d.ts +1 -0
  12. package/dist/__tests__/components/UnitInput.test.d.ts +1 -0
  13. package/dist/__tests__/components/WellPlate.keyboard.test.d.ts +1 -0
  14. package/dist/__tests__/components/WellPlate.sampleTypeIndicator.test.d.ts +1 -0
  15. package/dist/__tests__/composables/useChemicalFormula.test.d.ts +1 -0
  16. package/dist/__tests__/composables/useRackEditor.test.d.ts +1 -0
  17. package/dist/__tests__/composables/useSequenceUtils.test.d.ts +1 -0
  18. package/dist/__tests__/styles/baseControlsRules.test.d.ts +1 -0
  19. package/dist/__tests__/styles/controlRefreshRules.test.d.ts +1 -0
  20. package/dist/__tests__/styles/darkModeRules.test.d.ts +1 -0
  21. package/dist/__tests__/styles/menusShellRefresh.test.d.ts +1 -0
  22. package/dist/__tests__/templates/templatesDeprecation.test.d.ts +1 -0
  23. package/dist/__tests__/utils/plotlyTemplate.test.d.ts +1 -0
  24. package/dist/__tests__/utils/sampleTypeMarker.test.d.ts +1 -0
  25. package/dist/{analysisArtifactTypes-DQ0MjwHZ.js → analysisArtifactTypes-Cy3D0Ipg.js} +1 -1
  26. package/dist/{analysisArtifactTypes-DQ0MjwHZ.js.map → analysisArtifactTypes-Cy3D0Ipg.js.map} +1 -1
  27. package/dist/components/ActionMenu.vue.d.ts +17 -5
  28. package/dist/components/AdductText.vue.d.ts +3 -2
  29. package/dist/components/AlertBox.vue.d.ts +11 -14
  30. package/dist/components/AppAvatarMenu.vue.d.ts +18 -28
  31. package/dist/components/AppContainer.vue.d.ts +7 -11
  32. package/dist/components/AppLayout.vue.d.ts +11 -13
  33. package/dist/components/AppSidebar.vue.d.ts +30 -28
  34. package/dist/components/AppToastContainer.vue.d.ts +2 -1
  35. package/dist/components/AppTopBar.vue.d.ts +45 -44
  36. package/dist/components/ArtifactSaveDialog.vue.d.ts +3 -2
  37. package/dist/components/ArtifactSelectorModal.vue.d.ts +5 -6
  38. package/dist/components/AuditTrail.vue.d.ts +17 -18
  39. package/dist/components/AutoGroupModal.vue.d.ts +4 -3
  40. package/dist/components/Avatar.vue.d.ts +2 -1
  41. package/dist/components/BaseButton.vue.d.ts +11 -13
  42. package/dist/components/BaseCheckbox.vue.d.ts +7 -1
  43. package/dist/components/BaseInput.vue.d.ts +15 -2
  44. package/dist/components/BaseModal.vue.d.ts +20 -23
  45. package/dist/components/BasePill.vue.d.ts +10 -13
  46. package/dist/components/BaseRadioGroup.vue.d.ts +2 -1
  47. package/dist/components/BaseSelect.vue.d.ts +3 -2
  48. package/dist/components/BaseSlider.vue.d.ts +18 -1
  49. package/dist/components/BaseTabs.vue.d.ts +2 -1
  50. package/dist/components/BaseTextarea.vue.d.ts +2 -1
  51. package/dist/components/BaseToggle.vue.d.ts +2 -1
  52. package/dist/components/BatchProgressList.vue.d.ts +22 -26
  53. package/dist/components/BioTemplateExperimentWorkspaceView.vue.d.ts +7 -14
  54. package/dist/components/BioTemplatePackWorkspaceView.vue.d.ts +6 -13
  55. package/dist/components/BioTemplatePresetWorkspaceView.vue.d.ts +7 -14
  56. package/dist/components/BioTemplateRenderer.vue.d.ts +2 -1
  57. package/dist/components/Breadcrumb.vue.d.ts +13 -16
  58. package/dist/components/Calendar.vue.d.ts +21 -23
  59. package/dist/components/ChartContainer.vue.d.ts +19 -25
  60. package/dist/components/ChemicalFormula.vue.d.ts +7 -11
  61. package/dist/components/CollapsibleCard.vue.d.ts +7 -11
  62. package/dist/components/ComponentBindingRenderer.vue.d.ts +2 -1
  63. package/dist/components/ConcentrationInput.vue.d.ts +2 -1
  64. package/dist/components/ConfirmDialog.vue.d.ts +10 -13
  65. package/dist/components/ControlWorkspaceView.vue.d.ts +9 -18
  66. package/dist/components/DataFrame.vue.d.ts +27 -24
  67. package/dist/components/DatePicker.vue.d.ts +3 -6
  68. package/dist/components/DateTimePicker.vue.d.ts +3 -6
  69. package/dist/components/Divider.vue.d.ts +3 -2
  70. package/dist/components/DoseCalculator.vue.d.ts +2 -1
  71. package/dist/components/DoseCalculatorVolumeField.vue.d.ts +2 -1
  72. package/dist/components/DoseDesignWorkspaceView.vue.d.ts +9 -18
  73. package/dist/components/EmptyState.vue.d.ts +9 -12
  74. package/dist/components/ExperimentCodeBadge.vue.d.ts +2 -1
  75. package/dist/components/ExperimentDataViewer.vue.d.ts +13 -15
  76. package/dist/components/ExperimentPopover.vue.d.ts +3 -5
  77. package/dist/components/ExperimentSelectorModal.vue.d.ts +3 -4
  78. package/dist/components/ExperimentTimeline.vue.d.ts +13 -15
  79. package/dist/components/FilePicker.vue.d.ts +10 -5
  80. package/dist/components/FileUploader.vue.d.ts +8 -16
  81. package/dist/components/FitPanel.vue.d.ts +26 -16
  82. package/dist/components/FormActions.vue.d.ts +2 -1
  83. package/dist/components/FormBuilder.vue.d.ts +54 -250
  84. package/dist/components/FormField.vue.d.ts +14 -16
  85. package/dist/components/FormulaInput.vue.d.ts +2 -1
  86. package/dist/components/GeneratedPathInput.vue.d.ts +6 -5
  87. package/dist/components/GeneratedPlotlyResult.vue.d.ts +2 -1
  88. package/dist/components/GeneratedPluginView.vue.d.ts +2 -1
  89. package/dist/components/GeneratedResultRenderer.vue.d.ts +2 -1
  90. package/dist/components/GroupAssigner.vue.d.ts +2 -1
  91. package/dist/components/IconButton.vue.d.ts +7 -11
  92. package/dist/components/InstrumentStateBadge.vue.d.ts +4 -3
  93. package/dist/components/JobsStatusTray.vue.d.ts +13 -29
  94. package/dist/components/LayoutResizeHandle.vue.d.ts +2 -1
  95. package/dist/components/LoadingSpinner.vue.d.ts +2 -1
  96. package/dist/components/MobileSupportGate.vue.d.ts +5 -13
  97. package/dist/components/MoleculeInput.vue.d.ts +3 -4
  98. package/dist/components/MultiSelect.vue.d.ts +2 -1
  99. package/dist/components/NumberInput.vue.d.ts +2 -1
  100. package/dist/components/PlateEditor.vue.d.ts +147 -0
  101. package/dist/components/PlotlyChart.vue.d.ts +21 -31
  102. package/dist/components/PluginIcon.vue.d.ts +2 -1
  103. package/dist/components/PluginWorkspaceView.props.d.ts +2 -6
  104. package/dist/components/PluginWorkspaceView.vue.d.ts +23 -51
  105. package/dist/components/ProgressBar.vue.d.ts +4 -9
  106. package/dist/components/ProtocolStepEditor.vue.d.ts +7 -5
  107. package/dist/components/ProtocolStepParameterField.vue.d.ts +2 -1
  108. package/dist/components/ReagentEditor.vue.d.ts +2 -1
  109. package/dist/components/ReagentList.presentation.d.ts +2 -1
  110. package/dist/components/ReagentList.vue.d.ts +15 -17
  111. package/dist/components/ResourceCard.vue.d.ts +18 -17
  112. package/dist/components/RuntimeUpdateNotice.vue.d.ts +3 -2
  113. package/dist/components/SampleHierarchyTree.vue.d.ts +21 -15
  114. package/dist/components/SampleLegend.vue.d.ts +2 -1
  115. package/dist/components/SampleSelector.vue.d.ts +15 -21
  116. package/dist/components/SampleSelectorGroupNode.vue.d.ts +2 -1
  117. package/dist/components/SampleSelectorSampleRow.vue.d.ts +2 -5
  118. package/dist/components/ScheduleCalendar.vue.d.ts +34 -36
  119. package/dist/components/ScientificNumber.vue.d.ts +3 -2
  120. package/dist/components/SearchableSelect.vue.d.ts +14 -32
  121. package/dist/components/SecretInput.vue.d.ts +2 -1
  122. package/dist/components/SectionCard.vue.d.ts +13 -14
  123. package/dist/components/SegmentedControl.vue.d.ts +2 -1
  124. package/dist/components/SequenceInput.vue.d.ts +10 -21
  125. package/dist/components/SequenceProgressBar.vue.d.ts +2 -1
  126. package/dist/components/SettingsModal.schema.d.ts +1 -1
  127. package/dist/components/SettingsModal.vue.d.ts +28 -25
  128. package/dist/components/Skeleton.vue.d.ts +2 -1
  129. package/dist/components/SmartGroup.types.d.ts +2 -2
  130. package/dist/components/SmartGroupFieldRecipe.groups.d.ts +2 -0
  131. package/dist/components/SmartGroupFieldRecipe.vue.d.ts +4 -7
  132. package/dist/components/SmartGroupManual.vue.d.ts +3 -2
  133. package/dist/components/SmartGroupModal.vue.d.ts +6 -4
  134. package/dist/components/StatusIndicator.vue.d.ts +2 -1
  135. package/dist/components/StepWizard.vue.d.ts +26 -27
  136. package/dist/components/TagsInput.vue.d.ts +3 -5
  137. package/dist/components/ThemeToggle.vue.d.ts +2 -1
  138. package/dist/components/TimePicker.vue.d.ts +6 -6
  139. package/dist/components/TimeRangeInput.vue.d.ts +9 -2
  140. package/dist/components/Tooltip.vue.d.ts +8 -18
  141. package/dist/components/UnitInput.vue.d.ts +2 -1
  142. package/dist/components/WellPlate.colors.d.ts +2 -4
  143. package/dist/components/WellPlate.rendering.d.ts +7 -1
  144. package/dist/components/WellPlate.sampleDrop.d.ts +2 -0
  145. package/dist/components/WellPlate.vue.d.ts +22 -39
  146. package/dist/components/index.d.ts +34 -31
  147. package/dist/components/index.js +5 -8
  148. package/dist/components/internal/ActionItemInternal.vue.d.ts +11 -13
  149. package/dist/components/internal/AppTopBarPageSelectorInternal.vue.d.ts +14 -23
  150. package/dist/components/internal/AppTopBarPillNavInternal.vue.d.ts +2 -1
  151. package/dist/components/internal/CalendarGridPanelInternal.vue.d.ts +2 -1
  152. package/dist/components/internal/DataStateInternal.vue.d.ts +7 -11
  153. package/dist/components/internal/{FilePickerTreeInternal.vue.d.ts → FilePickerListInternal.vue.d.ts} +9 -6
  154. package/dist/components/internal/FilePickerPreviewInternal.vue.d.ts +4 -3
  155. package/dist/components/internal/FormFieldRendererInternal.vue.d.ts +16 -18
  156. package/dist/components/internal/FormSectionRenderer.vue.d.ts +36 -32
  157. package/dist/components/internal/PlateEditorBindingInternal.vue.d.ts +8 -0
  158. package/dist/components/internal/ResourcePickerListInternal.vue.d.ts +65 -0
  159. package/dist/components/internal/SettingsPaneHeadInternal.vue.d.ts +15 -0
  160. package/dist/components/internal/WellEditPopupInternal.vue.d.ts +12 -4
  161. package/dist/components/internal/WorkspaceControlsInternal.vue.d.ts +6 -13
  162. package/dist/components/internal/WorkspaceShellInternal.vue.d.ts +19 -42
  163. package/dist/components/internal/WorkspaceSidebarInternal.vue.d.ts +9 -19
  164. package/dist/components/internal/filePickerPresentation.d.ts +8 -0
  165. package/dist/components/internal/generatedJobsApi.d.ts +9 -0
  166. package/dist/{components-Bbg_gtzF.js → components-GDDvof8D.js} +7088 -5955
  167. package/dist/components-GDDvof8D.js.map +1 -0
  168. package/dist/composables/controlSchemaTypes.d.ts +4 -43
  169. package/dist/composables/createFilePickerAdapter.d.ts +5 -1
  170. package/dist/composables/filePicker/usePickerNavigation.d.ts +7 -2
  171. package/dist/composables/index.d.ts +2 -13
  172. package/dist/composables/index.js +7 -11
  173. package/dist/composables/pluginWorkspaceModel.d.ts +1 -3
  174. package/dist/composables/useAutoGroup.d.ts +10 -0
  175. package/dist/composables/useBioTemplateComponents.d.ts +15 -3
  176. package/dist/composables/useBioTemplateControls.d.ts +5 -1
  177. package/dist/composables/useBioTemplatePackWorkspace.d.ts +2 -0
  178. package/dist/composables/useBioTemplatePresetWorkspace.d.ts +5 -1
  179. package/dist/composables/useBioTemplateWorkspace.d.ts +5 -1
  180. package/dist/composables/useChemicalFormula.d.ts +2 -1
  181. package/dist/composables/useDropdownState.d.ts +5 -0
  182. package/dist/composables/useExperimentSave.d.ts +5 -1
  183. package/dist/composables/useFileBrowser.d.ts +3 -2
  184. package/dist/composables/useFilePicker.d.ts +25 -13
  185. package/dist/composables/useFocusTrap.d.ts +2 -1
  186. package/dist/composables/useGroupAssignment.d.ts +5 -1
  187. package/dist/composables/useJobsStatusTray.d.ts +5 -5
  188. package/dist/composables/useMenuKeyboard.d.ts +3 -3
  189. package/dist/composables/usePlatformContext.d.ts +3 -0
  190. package/dist/composables/usePluginClient.d.ts +1 -1
  191. package/dist/composables/useRackEditor.d.ts +36 -1
  192. package/dist/composables/useSequenceUtils.d.ts +8 -0
  193. package/dist/composables/useTemplateCollection.d.ts +5 -1
  194. package/dist/composables/workspaceRecipes.d.ts +1 -0
  195. package/dist/composables-D6uqp0UF.js +591 -0
  196. package/dist/composables-D6uqp0UF.js.map +1 -0
  197. package/dist/{errors-BLuqMee5.js → experiment-DgllIc3I.js} +89 -333
  198. package/dist/experiment-DgllIc3I.js.map +1 -0
  199. package/dist/{experiment-utils-CV2Wza3z.js → experiment-utils-DTANyVKV.js} +68 -37
  200. package/dist/experiment-utils-DTANyVKV.js.map +1 -0
  201. package/dist/index.d.ts +2 -0
  202. package/dist/index.js +122 -17
  203. package/dist/index.js.map +1 -1
  204. package/dist/install.js +1 -2
  205. package/dist/install.js.map +1 -1
  206. package/dist/instrument.d.ts +6 -0
  207. package/dist/lcms.d.ts +11 -0
  208. package/dist/permissions.d.ts +2 -47
  209. package/dist/permissions.js +2 -26
  210. package/dist/permissions.js.map +1 -1
  211. package/dist/settings-BLr8lzw6.js +341 -0
  212. package/dist/settings-BLr8lzw6.js.map +1 -0
  213. package/dist/stores/auth.d.ts +2 -150
  214. package/dist/stores/experiment.d.ts +2 -106
  215. package/dist/stores/index.js +2 -2
  216. package/dist/stores/settings.d.ts +2 -44
  217. package/dist/styles.css +8608 -6950
  218. package/dist/tailwind.preset.js.map +1 -1
  219. package/dist/templates/adapters.d.ts +3 -0
  220. package/dist/templates/assayMatrixAdapters.d.ts +8 -1
  221. package/dist/templates/assayMatrixBuilder.d.ts +1 -0
  222. package/dist/templates/builderPresetControls.d.ts +1 -0
  223. package/dist/templates/calibrationCurveAdapters.d.ts +3 -0
  224. package/dist/templates/calibrationCurveBuilder.d.ts +1 -0
  225. package/dist/templates/catalog.d.ts +6 -2
  226. package/dist/templates/componentBindings.d.ts +31 -5
  227. package/dist/templates/componentPlateHelpers.d.ts +7 -1
  228. package/dist/templates/controlSchemas.d.ts +9 -0
  229. package/dist/templates/defaultBioTemplateBuilder.d.ts +1 -0
  230. package/dist/templates/doseResponseAdapters.d.ts +2 -0
  231. package/dist/templates/doseResponseBuilder.d.ts +1 -0
  232. package/dist/templates/elisaAssayCollectionBuilder.d.ts +1 -0
  233. package/dist/templates/flowCytometryAssayCollectionBuilder.d.ts +1 -0
  234. package/dist/templates/flowCytometryPanelBuilder.d.ts +1 -0
  235. package/dist/templates/flowPanelAdapters.d.ts +3 -0
  236. package/dist/templates/index.d.ts +1 -1
  237. package/dist/templates/index.js +2 -3
  238. package/dist/templates/instrumentRunAdapters.d.ts +13 -2
  239. package/dist/templates/instrumentRunBuilder.d.ts +1 -0
  240. package/dist/templates/lcmsBatchCollectionBuilder.d.ts +1 -0
  241. package/dist/templates/packs.d.ts +4 -0
  242. package/dist/templates/plateMapAdapters.d.ts +2 -0
  243. package/dist/templates/plateMapBuilder.d.ts +1 -0
  244. package/dist/templates/presets.d.ts +6 -2
  245. package/dist/templates/protocolAdapters.d.ts +4 -0
  246. package/dist/templates/protocolStepsBuilder.d.ts +1 -0
  247. package/dist/templates/qpcrAdapters.d.ts +4 -0
  248. package/dist/templates/qpcrExpressionCollectionBuilder.d.ts +1 -0
  249. package/dist/templates/qpcrPlateBuilder.d.ts +1 -0
  250. package/dist/templates/reagentAdapters.d.ts +4 -0
  251. package/dist/templates/reagentListBuilder.d.ts +1 -0
  252. package/dist/templates/samplePrepAdapters.d.ts +3 -0
  253. package/dist/templates/samplePrepBuilder.d.ts +1 -0
  254. package/dist/templates/sampleSheetAdapters.d.ts +4 -0
  255. package/dist/templates/sampleSheetBuilder.d.ts +1 -0
  256. package/dist/templates/targetedMetabolomicsCollectionBuilder.d.ts +1 -0
  257. package/dist/templates/templateEnvelopes.d.ts +8 -0
  258. package/dist/templates/templatePackCollectionBuilder.d.ts +1 -0
  259. package/dist/templates/templatePresetCollectionBuilder.d.ts +2 -0
  260. package/dist/templates/templateValidators.d.ts +12 -0
  261. package/dist/templates/timeCourseAdapters.d.ts +4 -0
  262. package/dist/templates/timeCourseBuilder.d.ts +1 -0
  263. package/dist/templates/wellPlateScreenCollectionBuilder.d.ts +1 -0
  264. package/dist/templates/westernBlotAssayCollectionBuilder.d.ts +1 -0
  265. package/dist/templates-BU1pet28.js +12304 -0
  266. package/dist/templates-BU1pet28.js.map +1 -0
  267. package/dist/types/auth.d.ts +0 -27
  268. package/dist/types/componentLabTypes.d.ts +14 -7
  269. package/dist/types/componentWorkflowTypes.d.ts +26 -0
  270. package/dist/types/components.d.ts +40 -17
  271. package/dist/types/fileBrowserTypes.d.ts +13 -0
  272. package/dist/types/filePicker.d.ts +19 -1
  273. package/dist/types/generated-ui.d.ts +13 -0
  274. package/dist/types/index.d.ts +4 -4
  275. package/dist/types/index.js +1 -1
  276. package/dist/types/instrument.d.ts +43 -15
  277. package/dist/types/platform.d.ts +2 -0
  278. package/dist/utils/color.d.ts +6 -1
  279. package/dist/utils/formModelSync.d.ts +1 -0
  280. package/dist/utils/plotlyTemplate.d.ts +3 -0
  281. package/dist/utils/rack.d.ts +16 -0
  282. package/dist/utils/sampleTypeMarker.d.ts +23 -0
  283. package/dist/{validation-ChMyixAf.js → validation-Dmp9Q5W0.js} +3032 -838
  284. package/dist/validation-Dmp9Q5W0.js.map +1 -0
  285. package/package.json +17 -23
  286. package/src/__stories__/experiment-helpers.ts +8 -4
  287. package/src/__tests__/components/ActionMenu.test.ts +66 -0
  288. package/src/__tests__/components/AlertBox.test.ts +21 -0
  289. package/src/__tests__/components/AppAvatarMenu.test.ts +25 -0
  290. package/src/__tests__/components/AppTopBar.test.ts +79 -0
  291. package/src/__tests__/components/AppTopBarPageSelector.test.ts +20 -0
  292. package/src/__tests__/components/AppTopBarPillNav.test.ts +74 -0
  293. package/src/__tests__/components/ArtifactSelectorModal.test.ts +20 -6
  294. package/src/__tests__/components/AuditTrail.test.ts +38 -0
  295. package/src/__tests__/components/BaseCheckbox.test.ts +43 -0
  296. package/src/__tests__/components/BaseInput.test.ts +43 -0
  297. package/src/__tests__/components/BaseModal.test.ts +90 -0
  298. package/src/__tests__/components/BaseRadioGroup.test.ts +8 -0
  299. package/src/__tests__/components/BaseSlider.test.ts +116 -0
  300. package/src/__tests__/components/BaseToggle.test.ts +7 -0
  301. package/src/__tests__/components/BatchProgressList.test.ts +22 -14
  302. package/src/__tests__/components/BioTemplateExperimentWorkspaceView.test.ts +4 -4
  303. package/src/__tests__/components/BioTemplatePackWorkspaceView.test.ts +1 -1
  304. package/src/__tests__/components/BioTemplatePresetWorkspaceView.test.ts +8 -8
  305. package/src/__tests__/components/BioTemplateRenderer.test.ts +2 -2
  306. package/src/__tests__/components/Breadcrumb.test.ts +45 -0
  307. package/src/__tests__/components/CalendarGridPanel.test.ts +14 -0
  308. package/src/__tests__/components/ChartContainer.test.ts +23 -0
  309. package/src/__tests__/components/ChemicalFormula.test.ts +15 -0
  310. package/src/__tests__/components/CollapsibleCard.test.ts +12 -9
  311. package/src/__tests__/components/ComponentBindingRenderer.test.ts +45 -17
  312. package/src/__tests__/components/ConcentrationInput.test.ts +17 -2
  313. package/src/__tests__/components/DataFrame.test.ts +107 -4
  314. package/src/__tests__/components/DataStates.test.ts +0 -16
  315. package/src/__tests__/components/DatePicker.test.ts +10 -0
  316. package/src/__tests__/components/DoseCalculator.test.ts +47 -0
  317. package/src/__tests__/components/DoseCalculatorVolumeField.test.ts +37 -34
  318. package/src/__tests__/components/EmptyState.test.ts +16 -1
  319. package/src/__tests__/components/ExperimentSelectorModal.test.ts +31 -3
  320. package/src/__tests__/components/ExperimentTimeline.test.ts +45 -0
  321. package/src/__tests__/components/FilePicker.state.test.ts +2 -2
  322. package/src/__tests__/components/FilePicker.test.ts +360 -13
  323. package/src/__tests__/components/FileUploader.test.ts +15 -0
  324. package/src/__tests__/components/FitPanel.test.ts +96 -0
  325. package/src/__tests__/components/FormulaInput.test.ts +97 -0
  326. package/src/__tests__/components/GeneratedPathInput.test.ts +168 -41
  327. package/src/__tests__/components/GeneratedPlotlyResult.test.ts +1 -1
  328. package/src/__tests__/components/GeneratedResultRenderer.test.ts +47 -2
  329. package/src/__tests__/components/InstrumentStateBadge.test.ts +50 -0
  330. package/src/__tests__/components/JobsStatusTray.test.ts +27 -0
  331. package/src/__tests__/components/MoleculeInput.test.ts +78 -0
  332. package/src/__tests__/components/MultiSelect.test.ts +6 -0
  333. package/src/__tests__/components/PlateEditor.test.ts +1134 -0
  334. package/src/__tests__/components/PlateEditorBindingInternal.test.ts +64 -0
  335. package/src/__tests__/components/PlotlyChart.test.ts +147 -1
  336. package/src/__tests__/components/ProgressBar.test.ts +18 -0
  337. package/src/__tests__/components/ProtocolStepEditor.test.ts +106 -18
  338. package/src/__tests__/components/ProtocolStepParameterField.test.ts +74 -29
  339. package/src/__tests__/components/ReagentList.presentation.test.ts +10 -5
  340. package/src/__tests__/components/ReagentList.test.ts +23 -0
  341. package/src/__tests__/components/ResourcePickerListInternal.test.ts +141 -0
  342. package/src/__tests__/components/RetiredStyles.test.ts +0 -6
  343. package/src/__tests__/components/SampleHierarchyTree.test.ts +102 -0
  344. package/src/__tests__/components/SampleLegend.test.ts +18 -0
  345. package/src/__tests__/components/SampleSelector.test.ts +92 -1
  346. package/src/__tests__/components/SampleSelectorSampleRow.test.ts +5 -2
  347. package/src/__tests__/components/ScheduleCalendar.test.ts +32 -0
  348. package/src/__tests__/components/ScientificNumber.test.ts +113 -0
  349. package/src/__tests__/components/SearchableSelect.test.ts +21 -0
  350. package/src/__tests__/components/SecretInput.test.ts +6 -0
  351. package/src/__tests__/components/SegmentedControl.test.ts +14 -0
  352. package/src/__tests__/components/SequenceInput.test.ts +81 -0
  353. package/src/__tests__/components/SettingsModal.schema.test.ts +5 -5
  354. package/src/__tests__/components/SettingsModal.test.ts +371 -23
  355. package/src/__tests__/components/Skeleton.test.ts +23 -0
  356. package/src/__tests__/components/SmartGroupFieldRecipe.test.ts +12 -0
  357. package/src/__tests__/components/SmartGroupModal.test.ts +69 -0
  358. package/src/__tests__/components/StepWizard.test.ts +75 -0
  359. package/src/__tests__/components/TagsInput.test.ts +16 -0
  360. package/src/__tests__/components/TimePicker.test.ts +66 -0
  361. package/src/__tests__/components/TimeRangeInput.test.ts +83 -0
  362. package/src/__tests__/components/UnitInput.test.ts +147 -0
  363. package/src/__tests__/components/WellEditPopupInternal.test.ts +434 -2
  364. package/src/__tests__/components/WellPlate.decoration.test.ts +18 -0
  365. package/src/__tests__/components/WellPlate.geometry.test.ts +13 -0
  366. package/src/__tests__/components/WellPlate.interaction.test.ts +213 -0
  367. package/src/__tests__/components/WellPlate.keyboard.test.ts +24 -0
  368. package/src/__tests__/components/WellPlate.rendering.test.ts +38 -19
  369. package/src/__tests__/components/WellPlate.sampleDrop.test.ts +19 -0
  370. package/src/__tests__/components/WellPlate.sampleTypeIndicator.test.ts +58 -0
  371. package/src/__tests__/composables/createFilePickerAdapter.test.ts +114 -1
  372. package/src/__tests__/composables/useBioTemplatePackWorkspace.test.ts +1 -1
  373. package/src/__tests__/composables/useBioTemplateWorkspace.test.ts +1 -1
  374. package/src/__tests__/composables/useChemicalFormula.test.ts +60 -0
  375. package/src/__tests__/composables/useControlSchema.test.ts +15 -5
  376. package/src/__tests__/composables/useDropdownState.test.ts +20 -1
  377. package/src/__tests__/composables/useGeneratedAnalysis.test.ts +52 -0
  378. package/src/__tests__/composables/usePickerNavigation.test.ts +61 -1
  379. package/src/__tests__/composables/usePlatformFilePickerAdapter.test.ts +18 -6
  380. package/src/__tests__/composables/useRackEditor.test.ts +270 -0
  381. package/src/__tests__/composables/useSequenceUtils.test.ts +28 -0
  382. package/src/__tests__/docs/frontendDocsCatalog.test.ts +44 -9
  383. package/src/__tests__/styles/baseControlsRules.test.ts +115 -0
  384. package/src/__tests__/styles/controlRefreshRules.test.ts +218 -0
  385. package/src/__tests__/styles/cssTokens.test.ts +7 -5
  386. package/src/__tests__/styles/darkModeRules.test.ts +47 -0
  387. package/src/__tests__/styles/menusShellRefresh.test.ts +75 -0
  388. package/src/__tests__/templates/templates.test.ts +65 -15
  389. package/src/__tests__/templates/templatesDeprecation.test.ts +78 -0
  390. package/src/__tests__/utils/permissions.test.ts +0 -68
  391. package/src/__tests__/utils/plotlyTemplate.test.ts +69 -0
  392. package/src/__tests__/utils/sampleTypeMarker.test.ts +54 -0
  393. package/src/components/ActionMenu.vue +44 -23
  394. package/src/components/AdductText.story.vue +18 -0
  395. package/src/components/AdductText.vue +7 -1
  396. package/src/components/AlertBox.vue +3 -7
  397. package/src/components/AppAvatarMenu.vue +12 -10
  398. package/src/components/AppSidebar.vue +1 -1
  399. package/src/components/AppTopBar.story.vue +47 -4
  400. package/src/components/AppTopBar.vue +16 -22
  401. package/src/components/ArtifactSelectorModal.story.vue +1 -1
  402. package/src/components/ArtifactSelectorModal.vue +48 -160
  403. package/src/components/AuditTrail.vue +26 -12
  404. package/src/components/AutoGroupModal.vue +1 -1
  405. package/src/components/BaseCheckbox.story.vue +58 -2
  406. package/src/components/BaseCheckbox.vue +21 -3
  407. package/src/components/BaseInput.story.vue +51 -0
  408. package/src/components/BaseInput.vue +62 -1
  409. package/src/components/BaseModal.story.vue +55 -0
  410. package/src/components/BaseModal.vue +83 -50
  411. package/src/components/BaseRadioGroup.vue +1 -1
  412. package/src/components/BaseSlider.story.vue +36 -0
  413. package/src/components/BaseSlider.vue +56 -8
  414. package/src/components/BaseToggle.vue +1 -7
  415. package/src/components/BatchProgressList.vue +50 -52
  416. package/src/components/BioTemplatePresetWorkspaceView.vue +1 -1
  417. package/src/components/Breadcrumb.story.vue +1 -1
  418. package/src/components/Breadcrumb.vue +50 -15
  419. package/src/components/ChartContainer.story.vue +42 -0
  420. package/src/components/ChartContainer.vue +22 -1
  421. package/src/components/ChemicalFormula.story.vue +11 -11
  422. package/src/components/ChemicalFormula.vue +1 -0
  423. package/src/components/CollapsibleCard.vue +12 -32
  424. package/src/components/ComponentBindingRenderer.vue +6 -8
  425. package/src/components/ConcentrationInput.story.vue +1 -1
  426. package/src/components/ConcentrationInput.vue +8 -14
  427. package/src/components/ControlWorkspaceView.vue +1 -1
  428. package/src/components/DataFrame.story.vue +45 -2
  429. package/src/components/DataFrame.vue +28 -13
  430. package/src/components/DatePicker.story.vue +11 -0
  431. package/src/components/DatePicker.vue +5 -5
  432. package/src/components/DateTimePicker.story.vue +1 -1
  433. package/src/components/DateTimePicker.vue +8 -5
  434. package/src/components/Divider.story.vue +1 -1
  435. package/src/components/DoseCalculator.vue +44 -51
  436. package/src/components/DoseCalculatorVolumeField.vue +22 -35
  437. package/src/components/DoseDesignWorkspaceView.vue +1 -1
  438. package/src/components/EmptyState.story.vue +4 -4
  439. package/src/components/EmptyState.vue +4 -2
  440. package/src/components/ExperimentPopover.story.vue +2 -2
  441. package/src/components/ExperimentPopover.vue +6 -4
  442. package/src/components/ExperimentSelectorModal.story.vue +2 -1
  443. package/src/components/ExperimentSelectorModal.vue +91 -261
  444. package/src/components/ExperimentTimeline.story.vue +29 -0
  445. package/src/components/ExperimentTimeline.vue +20 -0
  446. package/src/components/FilePicker.story.vue +65 -10
  447. package/src/components/FilePicker.vue +203 -121
  448. package/src/components/FitPanel.story.vue +72 -6
  449. package/src/components/FitPanel.vue +70 -18
  450. package/src/components/FormField.vue +2 -0
  451. package/src/components/FormulaInput.story.vue +6 -0
  452. package/src/components/FormulaInput.vue +49 -70
  453. package/src/components/GeneratedPathInput.story.vue +121 -8
  454. package/src/components/GeneratedPathInput.vue +155 -86
  455. package/src/components/GeneratedPlotlyResult.vue +1 -1
  456. package/src/components/GeneratedPluginView.vue +4 -4
  457. package/src/components/GeneratedResultRenderer.vue +19 -0
  458. package/src/components/InstrumentStateBadge.story.vue +41 -0
  459. package/src/components/InstrumentStateBadge.vue +24 -14
  460. package/src/components/JobsStatusTray.vue +30 -8
  461. package/src/components/MoleculeInput.vue +12 -7
  462. package/src/components/MultiSelect.vue +3 -3
  463. package/src/components/PlateEditor.story.vue +333 -0
  464. package/src/components/PlateEditor.vue +793 -0
  465. package/src/components/PlotlyChart.story.vue +37 -1
  466. package/src/components/PlotlyChart.vue +86 -16
  467. package/src/components/PluginWorkspaceView.props.ts +1 -7
  468. package/src/components/PluginWorkspaceView.vue +0 -4
  469. package/src/components/ProgressBar.story.vue +0 -30
  470. package/src/components/ProgressBar.vue +3 -53
  471. package/src/components/ProtocolStepEditor.story.vue +8 -0
  472. package/src/components/ProtocolStepEditor.vue +55 -145
  473. package/src/components/ProtocolStepParameterField.vue +55 -93
  474. package/src/components/ReagentList.presentation.ts +7 -6
  475. package/src/components/ReagentList.vue +18 -17
  476. package/src/components/SampleHierarchyTree.story.vue +19 -0
  477. package/src/components/SampleHierarchyTree.vue +47 -14
  478. package/src/components/SampleLegend.vue +12 -4
  479. package/src/components/SampleSelector.story.vue +5 -1
  480. package/src/components/SampleSelector.vue +25 -15
  481. package/src/components/SampleSelectorGroupNode.vue +10 -20
  482. package/src/components/SampleSelectorSampleRow.vue +7 -18
  483. package/src/components/ScheduleCalendar.story.vue +14 -0
  484. package/src/components/ScheduleCalendar.vue +13 -1
  485. package/src/components/ScientificNumber.story.vue +15 -2
  486. package/src/components/ScientificNumber.vue +22 -26
  487. package/src/components/SearchableSelect.vue +14 -9
  488. package/src/components/SecretInput.vue +1 -1
  489. package/src/components/SegmentedControl.story.vue +23 -0
  490. package/src/components/SegmentedControl.vue +6 -1
  491. package/src/components/SequenceInput.story.vue +27 -5
  492. package/src/components/SequenceInput.vue +74 -29
  493. package/src/components/SequenceProgressBar.vue +0 -1
  494. package/src/components/SettingsModal.schema.ts +4 -2
  495. package/src/components/SettingsModal.story.vue +83 -22
  496. package/src/components/SettingsModal.vue +338 -79
  497. package/src/components/Skeleton.vue +6 -35
  498. package/src/components/SmartGroup.types.ts +2 -2
  499. package/src/components/SmartGroupFieldRecipe.groups.ts +4 -1
  500. package/src/components/SmartGroupFieldRecipe.vue +14 -8
  501. package/src/components/SmartGroupManual.vue +14 -11
  502. package/src/components/StepWizard.vue +16 -19
  503. package/src/components/TagsInput.story.vue +16 -11
  504. package/src/components/TagsInput.vue +20 -3
  505. package/src/components/TimePicker.story.vue +38 -3
  506. package/src/components/TimePicker.vue +26 -11
  507. package/src/components/TimeRangeInput.story.vue +50 -1
  508. package/src/components/TimeRangeInput.vue +36 -17
  509. package/src/components/UnitInput.story.vue +1 -1
  510. package/src/components/UnitInput.vue +173 -107
  511. package/src/components/WellPlate.colors.ts +7 -6
  512. package/src/components/WellPlate.geometry.ts +3 -0
  513. package/src/components/WellPlate.interaction.ts +39 -5
  514. package/src/components/WellPlate.rendering.ts +21 -27
  515. package/src/components/WellPlate.sampleDrop.ts +20 -12
  516. package/src/components/WellPlate.story.vue +18 -7
  517. package/src/components/WellPlate.vue +28 -22
  518. package/src/components/index.ts +34 -31
  519. package/src/components/internal/AppTopBarPageSelectorInternal.vue +13 -7
  520. package/src/components/internal/AppTopBarPillNavInternal.vue +12 -7
  521. package/src/components/internal/CalendarGridPanelInternal.vue +1 -1
  522. package/src/components/internal/FilePickerListInternal.vue +318 -0
  523. package/src/components/internal/FilePickerPreviewInternal.vue +54 -52
  524. package/src/components/internal/PlateEditorBindingInternal.vue +37 -0
  525. package/src/components/internal/ResourcePickerListInternal.vue +237 -0
  526. package/src/components/internal/SettingsPaneHeadInternal.vue +41 -0
  527. package/src/components/internal/WellEditPopupInternal.vue +219 -146
  528. package/src/components/internal/WorkspaceShellInternal.vue +0 -6
  529. package/src/components/internal/filePickerPresentation.ts +30 -0
  530. package/src/components/internal/generatedJobsApi.ts +12 -0
  531. package/src/composables/autoGroup/index.ts +3 -0
  532. package/src/composables/controlSchemaAdapters.ts +0 -4
  533. package/src/composables/controlSchemaFormFields.ts +0 -4
  534. package/src/composables/controlSchemaTypes.ts +4 -43
  535. package/src/composables/createFilePickerAdapter.ts +90 -22
  536. package/src/composables/filePicker/localFiles.ts +1 -0
  537. package/src/composables/filePicker/usePickerNavigation.ts +29 -2
  538. package/src/composables/index.ts +2 -71
  539. package/src/composables/pluginWorkspaceModel.ts +0 -3
  540. package/src/composables/useAutoGroup.ts +10 -0
  541. package/src/composables/useBioTemplateComponents.ts +15 -3
  542. package/src/composables/useBioTemplateControls.ts +5 -1
  543. package/src/composables/useBioTemplatePackWorkspace.ts +2 -0
  544. package/src/composables/useBioTemplatePresetWorkspace.ts +5 -1
  545. package/src/composables/useBioTemplateWorkspace.ts +5 -1
  546. package/src/composables/useChemicalFormula.ts +39 -13
  547. package/src/composables/useDropdownState.ts +6 -1
  548. package/src/composables/useExperimentSave.ts +5 -1
  549. package/src/composables/useFileBrowser.ts +3 -2
  550. package/src/composables/useFilePicker.ts +98 -13
  551. package/src/composables/useFocusTrap.ts +9 -6
  552. package/src/composables/useGeneratedAnalysis.ts +38 -0
  553. package/src/composables/useGroupAssignment.ts +5 -1
  554. package/src/composables/useJobsStatusTray.ts +5 -5
  555. package/src/composables/useMenuKeyboard.ts +5 -3
  556. package/src/composables/usePlatformFilePickerAdapter.ts +26 -4
  557. package/src/composables/usePluginClient.ts +1 -1
  558. package/src/composables/usePluginWorkspace.ts +0 -1
  559. package/src/composables/useRackEditor.ts +202 -12
  560. package/src/composables/useSequenceUtils.ts +20 -2
  561. package/src/composables/useTemplateCollection.ts +5 -1
  562. package/src/composables/workspaceRecipes.ts +1 -0
  563. package/src/index.ts +9 -3
  564. package/src/instrument.ts +6 -0
  565. package/src/lcms.ts +11 -0
  566. package/src/permissions.ts +2 -59
  567. package/src/styles/components/action-menu.css +9 -38
  568. package/src/styles/components/adduct-text.css +15 -3
  569. package/src/styles/components/alert-box.css +19 -70
  570. package/src/styles/components/app-avatar-menu.css +22 -57
  571. package/src/styles/components/app-container.css +4 -4
  572. package/src/styles/components/app-layout.css +18 -18
  573. package/src/styles/components/app-page-selector.css +50 -105
  574. package/src/styles/components/app-pill-nav.css +24 -42
  575. package/src/styles/components/app-sidebar.css +2 -2
  576. package/src/styles/components/app-top-bar.css +78 -55
  577. package/src/styles/components/artifact-selector-modal.css +1 -211
  578. package/src/styles/components/audit-trail.css +45 -38
  579. package/src/styles/components/avatar.css +1 -1
  580. package/src/styles/components/batch-progress-list.css +179 -95
  581. package/src/styles/components/breadcrumb.css +34 -15
  582. package/src/styles/components/calendar.css +2 -8
  583. package/src/styles/components/chart-container.css +81 -38
  584. package/src/styles/components/checkbox.css +8 -6
  585. package/src/styles/components/chemical-formula.css +8 -6
  586. package/src/styles/components/collapsible-card.css +6 -46
  587. package/src/styles/components/concentration-input.css +1 -10
  588. package/src/styles/components/dataframe.css +48 -67
  589. package/src/styles/components/date-picker.css +124 -62
  590. package/src/styles/components/datetime-picker.css +81 -47
  591. package/src/styles/components/divider.css +2 -4
  592. package/src/styles/components/dose-calculator.css +9 -135
  593. package/src/styles/components/empty-state.css +26 -35
  594. package/src/styles/components/experiment-code-badge.css +1 -1
  595. package/src/styles/components/experiment-popover.css +16 -83
  596. package/src/styles/components/experiment-selector-modal.css +9 -226
  597. package/src/styles/components/experiment-timeline.css +120 -50
  598. package/src/styles/components/file-picker.css +323 -299
  599. package/src/styles/components/file-uploader.css +4 -6
  600. package/src/styles/components/fit-panel.css +108 -22
  601. package/src/styles/components/form-field.css +6 -4
  602. package/src/styles/components/formula-input.css +121 -48
  603. package/src/styles/components/group-assigner.css +1 -3
  604. package/src/styles/components/icon-button.css +15 -37
  605. package/src/styles/components/input.css +91 -2
  606. package/src/styles/components/instrument-monitor.css +37 -447
  607. package/src/styles/components/jobs-status-tray.css +82 -61
  608. package/src/styles/components/loading-spinner.css +18 -0
  609. package/src/styles/components/mobile-support-gate.css +15 -17
  610. package/src/styles/components/modal.css +44 -33
  611. package/src/styles/components/molecule-input.css +31 -16
  612. package/src/styles/components/multi-select.css +33 -29
  613. package/src/styles/components/number-input.css +1 -1
  614. package/src/styles/components/plate-editor.css +497 -0
  615. package/src/styles/components/popover.css +162 -0
  616. package/src/styles/components/progress-bar.css +1 -70
  617. package/src/styles/components/protocol-step-editor.css +21 -333
  618. package/src/styles/components/radio-group.css +9 -18
  619. package/src/styles/components/reagent-editor.css +3 -7
  620. package/src/styles/components/reagent-list.css +63 -69
  621. package/src/styles/components/resource-card.css +4 -6
  622. package/src/styles/components/resource-picker-list.css +212 -0
  623. package/src/styles/components/sample-hierarchy-tree.css +83 -65
  624. package/src/styles/components/sample-legend.css +18 -7
  625. package/src/styles/components/sample-selector.css +41 -68
  626. package/src/styles/components/schedule-calendar.css +59 -54
  627. package/src/styles/components/scientific-number.css +72 -18
  628. package/src/styles/components/searchable-select.css +17 -26
  629. package/src/styles/components/secret-input.css +20 -23
  630. package/src/styles/components/section-card.css +3 -5
  631. package/src/styles/components/segmented-control.css +14 -1
  632. package/src/styles/components/select.css +19 -8
  633. package/src/styles/components/sequence-input.css +85 -37
  634. package/src/styles/components/sequence-progress-bar.css +18 -37
  635. package/src/styles/components/settings-modal.css +683 -34
  636. package/src/styles/components/skeleton.css +24 -23
  637. package/src/styles/components/slider.css +74 -8
  638. package/src/styles/components/smart-group.css +27 -39
  639. package/src/styles/components/status-indicator.css +1 -1
  640. package/src/styles/components/step-wizard.css +62 -99
  641. package/src/styles/components/tabs.css +2 -6
  642. package/src/styles/components/tags-input.css +64 -54
  643. package/src/styles/components/textarea.css +2 -2
  644. package/src/styles/components/time-picker.css +67 -38
  645. package/src/styles/components/time-range-input.css +16 -18
  646. package/src/styles/components/toast.css +1 -1
  647. package/src/styles/components/toggle.css +21 -31
  648. package/src/styles/components/tooltip.css +13 -15
  649. package/src/styles/components/unit-input.css +86 -36
  650. package/src/styles/components/well-edit-popup.css +111 -189
  651. package/src/styles/components/well-plate.css +7 -7
  652. package/src/styles/index.css +5 -7
  653. package/src/styles/variables.css +35 -7
  654. package/src/templates/adapters.ts +4 -0
  655. package/src/templates/assayMatrixAdapters.ts +8 -1
  656. package/src/templates/assayMatrixBuilder.ts +1 -0
  657. package/src/templates/builderPresetControls.ts +1 -0
  658. package/src/templates/calibrationCurveAdapters.ts +3 -0
  659. package/src/templates/calibrationCurveBuilder.ts +1 -0
  660. package/src/templates/catalog.ts +6 -2
  661. package/src/templates/componentBindingCatalog.ts +1 -1
  662. package/src/templates/componentBindings.ts +31 -5
  663. package/src/templates/componentDoseResponseProps.ts +0 -1
  664. package/src/templates/componentPlateHelpers.ts +22 -1
  665. package/src/templates/componentPlateMapProps.ts +7 -5
  666. package/src/templates/componentQpcrPlateProps.ts +0 -1
  667. package/src/templates/controlSchemas.ts +9 -0
  668. package/src/templates/defaultBioTemplateBuilder.ts +1 -0
  669. package/src/templates/doseResponseAdapters.ts +2 -0
  670. package/src/templates/doseResponseBuilder.ts +1 -0
  671. package/src/templates/elisaAssayCollectionBuilder.ts +1 -0
  672. package/src/templates/flowCytometryAssayCollectionBuilder.ts +1 -0
  673. package/src/templates/flowCytometryPanelBuilder.ts +1 -0
  674. package/src/templates/flowPanelAdapters.ts +3 -0
  675. package/src/templates/index.ts +4 -0
  676. package/src/templates/instrumentRunAdapters.ts +13 -2
  677. package/src/templates/instrumentRunBuilder.ts +1 -0
  678. package/src/templates/lcmsBatchCollectionBuilder.ts +1 -0
  679. package/src/templates/packs.ts +4 -0
  680. package/src/templates/plateMapAdapters.ts +2 -0
  681. package/src/templates/plateMapBuilder.ts +1 -0
  682. package/src/templates/presets.ts +6 -2
  683. package/src/templates/protocolAdapters.ts +4 -0
  684. package/src/templates/protocolStepsBuilder.ts +1 -0
  685. package/src/templates/qpcrAdapters.ts +4 -0
  686. package/src/templates/qpcrExpressionCollectionBuilder.ts +1 -0
  687. package/src/templates/qpcrPlateBuilder.ts +1 -0
  688. package/src/templates/reagentAdapters.ts +4 -0
  689. package/src/templates/reagentListBuilder.ts +1 -0
  690. package/src/templates/samplePrepAdapters.ts +3 -0
  691. package/src/templates/samplePrepBuilder.ts +1 -0
  692. package/src/templates/sampleSheetAdapters.ts +4 -0
  693. package/src/templates/sampleSheetBuilder.ts +1 -0
  694. package/src/templates/targetedMetabolomicsCollectionBuilder.ts +1 -0
  695. package/src/templates/templateEnvelopes.ts +8 -0
  696. package/src/templates/templatePackCollectionBuilder.ts +1 -0
  697. package/src/templates/templatePresetCollectionBuilder.ts +2 -0
  698. package/src/templates/templateValidators.ts +12 -0
  699. package/src/templates/timeCourseAdapters.ts +4 -0
  700. package/src/templates/timeCourseBuilder.ts +1 -0
  701. package/src/templates/wellPlateScreenCollectionBuilder.ts +1 -0
  702. package/src/templates/westernBlotAssayCollectionBuilder.ts +1 -0
  703. package/src/types/auth.ts +0 -37
  704. package/src/types/componentLabTypes.ts +16 -13
  705. package/src/types/componentWorkflowTypes.ts +29 -0
  706. package/src/types/components.ts +43 -20
  707. package/src/types/fileBrowserTypes.ts +15 -0
  708. package/src/types/filePicker.ts +19 -1
  709. package/src/types/generated-ui.ts +15 -0
  710. package/src/types/index.ts +12 -11
  711. package/src/types/instrument.ts +47 -15
  712. package/src/types/platform.ts +2 -0
  713. package/src/utils/color.ts +16 -1
  714. package/src/utils/formModelSync.ts +1 -1
  715. package/src/utils/plotlyTemplate.ts +39 -0
  716. package/src/utils/rack.ts +16 -0
  717. package/src/utils/sampleTypeMarker.ts +44 -0
  718. package/dist/ExperimentPopover-CJdNlCZb.js +0 -451
  719. package/dist/ExperimentPopover-CJdNlCZb.js.map +0 -1
  720. package/dist/ExperimentSelectorModal-DHE9k8TP.js +0 -507
  721. package/dist/ExperimentSelectorModal-DHE9k8TP.js.map +0 -1
  722. package/dist/SettingsModal-DELMkUFR.js +0 -492
  723. package/dist/SettingsModal-DELMkUFR.js.map +0 -1
  724. package/dist/Skeleton-jhF9wUkU.js +0 -485
  725. package/dist/Skeleton-jhF9wUkU.js.map +0 -1
  726. package/dist/__tests__/composables/usePluginConfig.test.d.ts +0 -15
  727. package/dist/chunk-BoAXSpZd.js +0 -33
  728. package/dist/components/AppPluginSwitcher.vue.d.ts +0 -40
  729. package/dist/components/ColorSlider.vue.d.ts +0 -34
  730. package/dist/components/DropdownButton.vue.d.ts +0 -49
  731. package/dist/components/FileBrowserModal.vue.d.ts +0 -99
  732. package/dist/components/InstrumentAlertLog.vue.d.ts +0 -22
  733. package/dist/components/InstrumentStatusCard.vue.d.ts +0 -13
  734. package/dist/components/LcmsSequenceTable.vue.d.ts +0 -54
  735. package/dist/components/PlateMapEditor.vue.d.ts +0 -50
  736. package/dist/components/RackEditor.vue.d.ts +0 -78
  737. package/dist/components/fileBrowserPresentation.d.ts +0 -10
  738. package/dist/components/internal/FileBrowserDialogInternal.vue.d.ts +0 -34
  739. package/dist/components/internal/FileBrowserListingInternal.vue.d.ts +0 -25
  740. package/dist/components/internal/FileBrowserToolbarInternal.vue.d.ts +0 -26
  741. package/dist/components/internal/PlateMapEditorToolbarInternal.vue.d.ts +0 -28
  742. package/dist/components-Bbg_gtzF.js.map +0 -1
  743. package/dist/composables/useAsync.d.ts +0 -132
  744. package/dist/composables/useAuth.d.ts +0 -47
  745. package/dist/composables/useCommandHistory.d.ts +0 -33
  746. package/dist/composables/useOptimisticMutation.d.ts +0 -32
  747. package/dist/composables/usePasskey.d.ts +0 -10
  748. package/dist/composables/usePluginConfig.d.ts +0 -27
  749. package/dist/composables/useResourceCrud.d.ts +0 -44
  750. package/dist/composables/useWellPainting.d.ts +0 -39
  751. package/dist/composables/useWellPlateAdapter.d.ts +0 -40
  752. package/dist/composables/useWellPlateEditor.d.ts +0 -33
  753. package/dist/composables/useWellPlateValidation.d.ts +0 -31
  754. package/dist/composables-BCbYb2lA.js +0 -2356
  755. package/dist/composables-BCbYb2lA.js.map +0 -1
  756. package/dist/errors-BLuqMee5.js.map +0 -1
  757. package/dist/experiment-CVDRAnqp.js +0 -90
  758. package/dist/experiment-CVDRAnqp.js.map +0 -1
  759. package/dist/experiment-utils-CV2Wza3z.js.map +0 -1
  760. package/dist/plotly.min-c2Sez60c.js +0 -180634
  761. package/dist/plotly.min-c2Sez60c.js.map +0 -1
  762. package/dist/templates-NuaNHohp.js +0 -5260
  763. package/dist/templates-NuaNHohp.js.map +0 -1
  764. package/dist/useControlSchema-vLiRPUmj.js +0 -7301
  765. package/dist/useControlSchema-vLiRPUmj.js.map +0 -1
  766. package/dist/useDropdownState-C7hRiVQf.js +0 -63
  767. package/dist/useDropdownState-C7hRiVQf.js.map +0 -1
  768. package/dist/useExperimentSelector-G_CAOFTX.js +0 -328
  769. package/dist/useExperimentSelector-G_CAOFTX.js.map +0 -1
  770. package/dist/useFormBuilder-D37ajgS8.js +0 -729
  771. package/dist/useFormBuilder-D37ajgS8.js.map +0 -1
  772. package/dist/validation-ChMyixAf.js.map +0 -1
  773. package/src/__tests__/components/AppPluginSwitcher.test.ts +0 -44
  774. package/src/__tests__/components/DropdownButton.test.ts +0 -628
  775. package/src/__tests__/components/FileBrowserModal.test.ts +0 -460
  776. package/src/__tests__/components/InstrumentAlertLog.test.ts +0 -59
  777. package/src/__tests__/components/LcmsSequenceTable.test.ts +0 -79
  778. package/src/__tests__/components/PlateMapEditorToolbarInternal.test.ts +0 -54
  779. package/src/__tests__/components/RackEditor.test.ts +0 -169
  780. package/src/__tests__/composables/useAuth.test.ts +0 -233
  781. package/src/__tests__/composables/useCommandHistory.test.ts +0 -43
  782. package/src/__tests__/composables/useOptimisticMutation.test.ts +0 -40
  783. package/src/__tests__/composables/usePluginConfig.test.ts +0 -497
  784. package/src/__tests__/composables/useResourceCrud.test.ts +0 -56
  785. package/src/__tests__/composables/useWellPainting.test.ts +0 -52
  786. package/src/__tests__/composables/useWellPlateAdapter.test.ts +0 -50
  787. package/src/__tests__/composables/useWellPlateValidation.test.ts +0 -42
  788. package/src/components/AppPluginSwitcher.story.vue +0 -87
  789. package/src/components/AppPluginSwitcher.vue +0 -134
  790. package/src/components/ColorSlider.story.vue +0 -120
  791. package/src/components/ColorSlider.vue +0 -160
  792. package/src/components/DropdownButton.story.vue +0 -102
  793. package/src/components/DropdownButton.vue +0 -181
  794. package/src/components/FileBrowserModal.story.vue +0 -203
  795. package/src/components/FileBrowserModal.vue +0 -384
  796. package/src/components/InstrumentAlertLog.vue +0 -187
  797. package/src/components/InstrumentStatusCard.vue +0 -184
  798. package/src/components/LcmsSequenceTable.vue +0 -222
  799. package/src/components/PlateMapEditor.story.vue +0 -92
  800. package/src/components/PlateMapEditor.vue +0 -423
  801. package/src/components/RackEditor.story.vue +0 -100
  802. package/src/components/RackEditor.vue +0 -429
  803. package/src/components/fileBrowserPresentation.ts +0 -39
  804. package/src/components/internal/FileBrowserDialogInternal.vue +0 -75
  805. package/src/components/internal/FileBrowserListingInternal.vue +0 -197
  806. package/src/components/internal/FileBrowserToolbarInternal.vue +0 -136
  807. package/src/components/internal/FilePickerTreeInternal.vue +0 -238
  808. package/src/components/internal/PlateMapEditorToolbarInternal.vue +0 -128
  809. package/src/composables/useAsync.ts +0 -327
  810. package/src/composables/useAuth.ts +0 -458
  811. package/src/composables/useCommandHistory.ts +0 -117
  812. package/src/composables/useOptimisticMutation.ts +0 -97
  813. package/src/composables/usePasskey.ts +0 -216
  814. package/src/composables/usePluginConfig.ts +0 -252
  815. package/src/composables/useResourceCrud.ts +0 -235
  816. package/src/composables/useWellPainting.ts +0 -167
  817. package/src/composables/useWellPlateAdapter.ts +0 -151
  818. package/src/composables/useWellPlateEditor.ts +0 -415
  819. package/src/composables/useWellPlateValidation.ts +0 -89
  820. package/src/plotly-dist.d.ts +0 -3
  821. package/src/styles/components/app-plugin-switcher.css +0 -196
  822. package/src/styles/components/color-slider.css +0 -110
  823. package/src/styles/components/dropdown-button.css +0 -280
  824. package/src/styles/components/file-browser-modal.css +0 -489
  825. package/src/styles/components/lcms-sequence-table.css +0 -204
  826. package/src/styles/components/plate-map-editor.css +0 -464
  827. package/src/styles/components/rack-editor.css +0 -287
  828. /package/dist/__tests__/components/{AppPluginSwitcher.test.d.ts → AlertBox.test.d.ts} +0 -0
  829. /package/dist/__tests__/components/{DropdownButton.test.d.ts → AuditTrail.test.d.ts} +0 -0
  830. /package/dist/__tests__/components/{FileBrowserModal.test.d.ts → BaseCheckbox.test.d.ts} +0 -0
  831. /package/dist/__tests__/components/{InstrumentAlertLog.test.d.ts → BaseSlider.test.d.ts} +0 -0
  832. /package/dist/__tests__/components/{LcmsSequenceTable.test.d.ts → DoseCalculator.test.d.ts} +0 -0
  833. /package/dist/__tests__/components/{PlateMapEditorToolbarInternal.test.d.ts → FileUploader.test.d.ts} +0 -0
  834. /package/dist/__tests__/components/{RackEditor.test.d.ts → FitPanel.test.d.ts} +0 -0
  835. /package/dist/__tests__/{composables/useAuth.test.d.ts → components/FormulaInput.test.d.ts} +0 -0
  836. /package/dist/__tests__/{composables/useCommandHistory.test.d.ts → components/InstrumentStateBadge.test.d.ts} +0 -0
  837. /package/dist/__tests__/{composables/useOptimisticMutation.test.d.ts → components/MoleculeInput.test.d.ts} +0 -0
  838. /package/dist/__tests__/{composables/useResourceCrud.test.d.ts → components/PlateEditor.test.d.ts} +0 -0
  839. /package/dist/__tests__/{composables/useWellPainting.test.d.ts → components/PlateEditorBindingInternal.test.d.ts} +0 -0
  840. /package/dist/__tests__/{composables/useWellPlateAdapter.test.d.ts → components/ResourcePickerListInternal.test.d.ts} +0 -0
  841. /package/dist/__tests__/{composables/useWellPlateValidation.test.d.ts → components/SampleLegend.test.d.ts} +0 -0
@@ -1,5 +1,5 @@
1
1
  import { mount } from '@vue/test-utils'
2
- import { defineComponent } from 'vue'
2
+ import { defineComponent, nextTick } from 'vue'
3
3
  import { describe, expect, it } from 'vitest'
4
4
  import ComponentBindingRenderer from '../../components/ComponentBindingRenderer.vue'
5
5
 
@@ -33,17 +33,15 @@ const DataFrameStub = defineComponent({
33
33
  template: '<div data-test="data-frame" />',
34
34
  })
35
35
 
36
- const PlateMapEditorStub = defineComponent({
37
- name: 'PlateMapEditor',
36
+ const PlateEditorStub = defineComponent({
37
+ name: 'PlateEditor',
38
38
  props: {
39
- modelValue: { type: Object, default: () => ({}) },
40
- showToolbar: { type: Boolean, default: true },
41
- showSidebar: { type: Boolean, default: true },
42
- allowAddPlates: { type: Boolean, default: true },
43
- allowAddSamples: { type: Boolean, default: true },
39
+ modelValue: { type: Array, default: () => [] },
40
+ readonly: { type: Boolean, default: false },
44
41
  size: { type: String, default: undefined },
45
42
  },
46
- template: '<div data-test="plate-map-editor" />',
43
+ emits: ['assign'],
44
+ template: '<div data-test="plate-editor" />',
47
45
  })
48
46
 
49
47
  const ExperimentTimelineStub = defineComponent({
@@ -85,7 +83,7 @@ const globalOptions = {
85
83
  DataFrame: DataFrameStub,
86
84
  DoseCalculator: DoseCalculatorStub,
87
85
  ExperimentTimeline: ExperimentTimelineStub,
88
- PlateMapEditor: PlateMapEditorStub,
86
+ PlateEditor: PlateEditorStub,
89
87
  SampleSelector: SampleSelectorStub,
90
88
  ScheduleCalendar: ScheduleCalendarStub,
91
89
  WellPlate: WellPlateStub,
@@ -138,19 +136,16 @@ describe('ComponentBindingRenderer', () => {
138
136
  props: {
139
137
  binding: {
140
138
  id: 'plate-map',
141
- component: 'PlateMapEditor',
142
- propsObject: { modelValue: { plates: [] } },
139
+ component: 'PlateEditor',
140
+ propsObject: { modelValue: [] },
143
141
  },
144
142
  dense: true,
145
143
  },
146
144
  global: globalOptions,
147
145
  })
148
146
 
149
- expect(wrapper.findComponent(PlateMapEditorStub).props()).toMatchObject({
150
- showToolbar: false,
151
- showSidebar: false,
152
- allowAddPlates: false,
153
- allowAddSamples: false,
147
+ expect(wrapper.findComponent(PlateEditorStub).props()).toMatchObject({
148
+ readonly: true,
154
149
  size: 'md',
155
150
  })
156
151
  })
@@ -275,4 +270,37 @@ describe('ComponentBindingRenderer', () => {
275
270
  enableSmartGroup: false,
276
271
  })
277
272
  })
273
+
274
+ it('should apply PlateEditor intents to its own copy of the plates when not readonly', async () => {
275
+ const plates = [{ id: 'p1', name: 'P1', format: 96, slot: 'R', injectionVolume: 0, wells: {} }]
276
+ const wrapper = mount(ComponentBindingRenderer, {
277
+ props: {
278
+ binding: { id: 'plate-map', component: 'PlateEditor', propsObject: { modelValue: plates } },
279
+ readonly: false,
280
+ },
281
+ global: globalOptions,
282
+ })
283
+
284
+ wrapper.findComponent(PlateEditorStub).vm.$emit('assign', 'p1', ['A1'], 'ctrl')
285
+ await nextTick()
286
+
287
+ expect((wrapper.findComponent(PlateEditorStub).props('modelValue') as Array<{ wells: Record<string, unknown> }>)[0].wells.A1)
288
+ .toMatchObject({ group: 'ctrl' })
289
+ })
290
+
291
+ it('should leave the binding plates untouched when an intent is applied', async () => {
292
+ const plates = [{ id: 'p1', name: 'P1', format: 96, slot: 'R', injectionVolume: 0, wells: {} }]
293
+ const wrapper = mount(ComponentBindingRenderer, {
294
+ props: {
295
+ binding: { id: 'plate-map', component: 'PlateEditor', propsObject: { modelValue: plates } },
296
+ readonly: false,
297
+ },
298
+ global: globalOptions,
299
+ })
300
+
301
+ wrapper.findComponent(PlateEditorStub).vm.$emit('assign', 'p1', ['A1'], 'ctrl')
302
+ await nextTick()
303
+
304
+ expect(plates[0].wells).toEqual({})
305
+ })
278
306
  })
@@ -20,8 +20,8 @@ describe('ConcentrationInput', () => {
20
20
  expect(unitInput.props('modelValue')).toBe(5)
21
21
  expect(unitInput.props('unit')).toBe('µM')
22
22
  expect(unitInput.props('units')).toEqual([
23
- { value: 'nM', label: 'nM', group: undefined },
24
- { value: 'µM', label: 'µM', group: undefined },
23
+ { value: 'nM', label: 'nM', group: undefined, factor: 1e-9 },
24
+ { value: 'µM', label: 'µM', group: undefined, factor: 1e-6 },
25
25
  ])
26
26
 
27
27
  await unitInput.vm.$emit('update:modelValue', 8)
@@ -42,4 +42,19 @@ describe('ConcentrationInput', () => {
42
42
 
43
43
  expect(wrapper.text()).toContain('1 µM')
44
44
  })
45
+
46
+ it('should render the approximation sign as text when a hint is shown', () => {
47
+ const wrapper = mount(ConcentrationInput, { props: { modelValue: { value: 1000, unit: 'nM' } } })
48
+ expect(wrapper.find('.mint-unit-input__hint').text()).toBe('≈ 1 µM')
49
+ })
50
+
51
+ it('should show the nearest-unit hint when the value is 250 µM', () => {
52
+ const wrapper = mount(ConcentrationInput, { props: { modelValue: { value: 250, unit: 'µM' } } })
53
+ expect(wrapper.find('.mint-unit-input__hint').text()).toBe('≈ 0.25 mM')
54
+ })
55
+
56
+ it('should hide the hint when showConversion is false', () => {
57
+ const wrapper = mount(ConcentrationInput, { props: { modelValue: { value: 250, unit: 'µM' }, showConversion: false } })
58
+ expect(wrapper.find('.mint-unit-input__hint').exists()).toBe(false)
59
+ })
45
60
  })
@@ -433,7 +433,7 @@ describe('DataFrame', () => {
433
433
  const wrapper = mount(DataFrame, {
434
434
  props: { data: mockData, columns: mockColumns, selectable: true, rowKey: 'id' },
435
435
  })
436
- const rowCheckboxes = wrapper.findAll('.mint-dataframe__td--checkbox .mint-dataframe__checkbox')
436
+ const rowCheckboxes = wrapper.findAll('.mint-dataframe__td--checkbox .mint-dataframe__checkbox input')
437
437
  await rowCheckboxes[0].trigger('change')
438
438
 
439
439
  expect(wrapper.emitted('update:selectedKeys')).toHaveLength(1)
@@ -451,7 +451,7 @@ describe('DataFrame', () => {
451
451
  selectedKeys: [1],
452
452
  },
453
453
  })
454
- const rowCheckboxes = wrapper.findAll('.mint-dataframe__td--checkbox .mint-dataframe__checkbox')
454
+ const rowCheckboxes = wrapper.findAll('.mint-dataframe__td--checkbox .mint-dataframe__checkbox input')
455
455
  await rowCheckboxes[0].trigger('change')
456
456
 
457
457
  const keys = wrapper.emitted('update:selectedKeys')?.[0]?.[0] as number[]
@@ -462,7 +462,7 @@ describe('DataFrame', () => {
462
462
  const wrapper = mount(DataFrame, {
463
463
  props: { data: mockData, columns: mockColumns, selectable: true, rowKey: 'id' },
464
464
  })
465
- const headerCheckbox = wrapper.find('.mint-dataframe__th--checkbox .mint-dataframe__checkbox')
465
+ const headerCheckbox = wrapper.find('.mint-dataframe__th--checkbox .mint-dataframe__checkbox input')
466
466
  await headerCheckbox.trigger('change')
467
467
 
468
468
  const keys = wrapper.emitted('update:selectedKeys')?.[0]?.[0] as number[]
@@ -482,6 +482,30 @@ describe('DataFrame', () => {
482
482
  const selectedRow = wrapper.find('.mint-dataframe__row--selected')
483
483
  expect(selectedRow.exists()).toBe(true)
484
484
  })
485
+
486
+ it('should render row checkboxes as BaseCheckbox sm when selectable', () => {
487
+ const wrapper = mount(DataFrame, {
488
+ props: { data: mockData, columns: mockColumns, selectable: true, rowKey: 'id' },
489
+ })
490
+ expect(wrapper.find('.mint-dataframe__td--checkbox .mint-checkbox__box--sm').exists()).toBe(true)
491
+ })
492
+
493
+ it('should mark the header checkbox mixed when some rows are selected', () => {
494
+ const wrapper = mount(DataFrame, {
495
+ props: { data: mockData, columns: mockColumns, selectable: true, rowKey: 'id', selectedKeys: [1] },
496
+ })
497
+ const header = wrapper.find('.mint-dataframe__th--checkbox input')
498
+ expect(header.attributes('aria-checked')).toBe('mixed')
499
+ })
500
+
501
+ it('should select all rows when the mixed header checkbox is clicked', async () => {
502
+ const wrapper = mount(DataFrame, {
503
+ props: { data: mockData, columns: mockColumns, selectable: true, rowKey: 'id', selectedKeys: [1] },
504
+ })
505
+ await wrapper.find('.mint-dataframe__th--checkbox input').setValue(true)
506
+ const keys = wrapper.emitted('update:selectedKeys')?.[0]?.[0] as number[]
507
+ expect(keys).toHaveLength(3)
508
+ })
485
509
  })
486
510
 
487
511
  describe('events', () => {
@@ -850,7 +874,7 @@ describe('DataFrame', () => {
850
874
  rowKey: 'id',
851
875
  },
852
876
  })
853
- const checkbox = wrapper.find('.mint-dataframe__td--checkbox .mint-dataframe__checkbox')
877
+ const checkbox = wrapper.find('.mint-dataframe__td--checkbox .mint-dataframe__checkbox input')
854
878
  await checkbox.trigger('click')
855
879
 
856
880
  // Row click should not be emitted
@@ -1084,4 +1108,83 @@ describe('DataFrame', () => {
1084
1108
  expect(wrapper.find('.mint-dataframe__td--lg').exists()).toBe(true)
1085
1109
  })
1086
1110
  })
1111
+
1112
+ describe('column unit, type and precision (2a)', () => {
1113
+ const measureData = [{ id: 1, sample: 'A-01', conc: 12.5, rt: 2.4 }]
1114
+ const measureColumns: DataFrameColumn[] = [
1115
+ { key: 'sample', label: 'Sample' },
1116
+ { key: 'conc', label: 'Conc', unit: 'µM', type: 'number' },
1117
+ { key: 'rt', label: 'RT', unit: 'min', type: 'number', precision: 2 },
1118
+ ]
1119
+ const mountMeasures = () => mount(DataFrame, { props: { data: measureData, columns: measureColumns } })
1120
+
1121
+ it('should render the unit in its own element when a column declares a unit', () => {
1122
+ const header = mountMeasures().findAll('.mint-dataframe__th')[1]
1123
+ expect(header.find('.mint-dataframe__th-unit').text()).toBe('µM')
1124
+ })
1125
+
1126
+ it('should keep the label text free of the unit when a column declares a unit', () => {
1127
+ const header = mountMeasures().findAll('.mint-dataframe__th')[1]
1128
+ expect(header.find('.mint-dataframe__th-label').text()).toBe('Conc')
1129
+ })
1130
+
1131
+ it('should render no unit element when a column has no unit', () => {
1132
+ const header = mountMeasures().findAll('.mint-dataframe__th')[0]
1133
+ expect(header.find('.mint-dataframe__th-unit').exists()).toBe(false)
1134
+ })
1135
+
1136
+ it('should mark cells as numeric when the column type is number', () => {
1137
+ const cell = mountMeasures().findAll('.mint-dataframe__td')[1]
1138
+ expect(cell.classes()).toContain('mint-dataframe__td--number')
1139
+ })
1140
+
1141
+ it('should right-align cells when the column type is number', () => {
1142
+ const cell = mountMeasures().findAll('.mint-dataframe__td')[1]
1143
+ expect(cell.classes()).toContain('mint-dataframe__td--align-right')
1144
+ })
1145
+
1146
+ it('should right-align the header when the column type is number', () => {
1147
+ const header = mountMeasures().findAll('.mint-dataframe__th')[1]
1148
+ expect(header.classes()).toContain('mint-dataframe__th--align-right')
1149
+ })
1150
+
1151
+ it('should keep an explicit align when the column type is number', () => {
1152
+ const wrapper = mount(DataFrame, {
1153
+ props: { data: measureData, columns: [{ key: 'conc', label: 'Conc', type: 'number', align: 'center' }] },
1154
+ })
1155
+ expect(wrapper.find('.mint-dataframe__td').classes()).toContain('mint-dataframe__td--align-center')
1156
+ })
1157
+
1158
+ it('should not mark cells as numeric when the column has no type', () => {
1159
+ const cell = mountMeasures().findAll('.mint-dataframe__td')[0]
1160
+ expect(cell.classes()).not.toContain('mint-dataframe__td--number')
1161
+ })
1162
+
1163
+ it('should format numbers to the given precision when a column declares precision', () => {
1164
+ const cell = mountMeasures().findAll('.mint-dataframe__td')[2]
1165
+ expect(cell.text()).toBe('2.40')
1166
+ })
1167
+
1168
+ it('should leave numbers unformatted when a column declares no precision', () => {
1169
+ const cell = mountMeasures().findAll('.mint-dataframe__td')[1]
1170
+ expect(cell.text()).toBe('12.5')
1171
+ })
1172
+
1173
+ it('should let the formatter win when a column declares both formatter and precision', () => {
1174
+ const wrapper = mount(DataFrame, {
1175
+ props: {
1176
+ data: measureData,
1177
+ columns: [{ key: 'rt', label: 'RT', precision: 2, formatter: (v: unknown) => `~${String(v)}` }],
1178
+ },
1179
+ })
1180
+ expect(wrapper.find('.mint-dataframe__td').text()).toBe('~2.4')
1181
+ })
1182
+
1183
+ it('should leave non-numeric values untouched when a column declares precision', () => {
1184
+ const wrapper = mount(DataFrame, {
1185
+ props: { data: [{ rt: 'n/a' }], columns: [{ key: 'rt', label: 'RT', type: 'number', precision: 2 }] },
1186
+ })
1187
+ expect(wrapper.find('.mint-dataframe__td').text()).toBe('n/a')
1188
+ })
1189
+ })
1087
1190
  })
@@ -3,7 +3,6 @@ import { mount } from '@vue/test-utils'
3
3
  import AuditTrail from '../../components/AuditTrail.vue'
4
4
  import BatchProgressList from '../../components/BatchProgressList.vue'
5
5
  import ExperimentTimeline from '../../components/ExperimentTimeline.vue'
6
- import LcmsSequenceTable from '../../components/LcmsSequenceTable.vue'
7
6
  import ReagentList from '../../components/ReagentList.vue'
8
7
  import SampleHierarchyTree from '../../components/SampleHierarchyTree.vue'
9
8
  import ScheduleCalendar from '../../components/ScheduleCalendar.vue'
@@ -39,21 +38,6 @@ const cases = [
39
38
  filledProps: { modelValue: [{ id: 's1', name: 'Step 1', order: 1, type: 'incubation' }] },
40
39
  contentSelector: '.mint-timeline__step',
41
40
  },
42
- {
43
- name: 'LcmsSequenceTable',
44
- component: LcmsSequenceTable,
45
- emptyProps: { items: [] },
46
- filledProps: {
47
- items: [{
48
- file_name: 'a.raw',
49
- position: 'A1',
50
- sample_type: 'Unknown',
51
- instrument_method: 'm',
52
- injection_volume: 1,
53
- }],
54
- },
55
- contentSelector: '.mint-lcms-sequence-table__scroller',
56
- },
57
41
  {
58
42
  name: 'ReagentList',
59
43
  component: ReagentList,
@@ -118,4 +118,14 @@ describe('DatePicker', () => {
118
118
 
119
119
  wrapper.unmount()
120
120
  })
121
+
122
+ it('should render the calendar on the shared popover surface when opened', async () => {
123
+ const wrapper = mount(DatePicker, { attachTo: document.body })
124
+
125
+ await wrapper.get('input').trigger('click')
126
+
127
+ expect(dropdown()?.classList.contains('mint-popover')).toBe(true)
128
+
129
+ wrapper.unmount()
130
+ })
121
131
  })
@@ -0,0 +1,47 @@
1
+ import { mount } from '@vue/test-utils'
2
+ import { describe, expect, it } from 'vitest'
3
+ import { nextTick } from 'vue'
4
+ import BaseButton from '../../components/BaseButton.vue'
5
+ import BaseInput from '../../components/BaseInput.vue'
6
+ import DoseCalculator from '../../components/DoseCalculator.vue'
7
+
8
+ async function mountSerial(props: Record<string, unknown> = {}) {
9
+ const wrapper = mount(DoseCalculator, { props: { mode: 'serial', ...props } })
10
+ await nextTick()
11
+ return wrapper
12
+ }
13
+
14
+ describe('DoseCalculator (6c)', () => {
15
+ it('should enter the dilution factor in a BaseInput with a × suffix', async () => {
16
+ const wrapper = await mountSerial()
17
+
18
+ expect(wrapper.findAll('.mint-input-group__suffix').map((s) => s.text())).toContain('×')
19
+ })
20
+
21
+ it('should enter the number of dilutions in a BaseInput', async () => {
22
+ const wrapper = await mountSerial()
23
+
24
+ expect(wrapper.findAllComponents(BaseInput).map((i) => i.props('modelValue'))).toContain(8)
25
+ })
26
+
27
+ it('should recalculate when the dilution factor changes', async () => {
28
+ const wrapper = await mountSerial()
29
+
30
+ wrapper.findAllComponents(BaseInput).find((i) => i.props('modelValue') === 3)!.vm.$emit('update:modelValue', 2)
31
+ await nextTick()
32
+
33
+ expect(wrapper.emitted('calculate')?.at(-1)?.[0]).toMatchObject({ steps: expect.any(Array) })
34
+ })
35
+
36
+ it('should apply to wells with a primary BaseButton', async () => {
37
+ const wrapper = await mountSerial({ targetWells: ['A1', 'A2'] })
38
+
39
+ expect(wrapper.findComponent(BaseButton).props('variant')).toBe('primary')
40
+ })
41
+
42
+ it('should size the serial row fields to the 32px control height', async () => {
43
+ const wrapper = await mountSerial()
44
+
45
+ expect(wrapper.findAllComponents(BaseInput).map((i) => i.props('size'))).toEqual(['sm', 'sm'])
46
+ })
47
+ })
@@ -1,53 +1,56 @@
1
1
  import { mount } from '@vue/test-utils'
2
2
  import { describe, expect, it } from 'vitest'
3
3
  import DoseCalculatorVolumeField from '../../components/DoseCalculatorVolumeField.vue'
4
+ import FormField from '../../components/FormField.vue'
5
+ import UnitInput from '../../components/UnitInput.vue'
6
+ import type { VolumeUnit } from '../../composables/useDoseCalculator'
7
+
8
+ const units: VolumeUnit[] = ['µL', 'mL', 'L']
9
+
10
+ function mountField(modelValue = { value: 1, unit: 'mL' as VolumeUnit }) {
11
+ return mount(DoseCalculatorVolumeField, { props: { label: 'Final Volume', modelValue, units } })
12
+ }
4
13
 
5
14
  describe('DoseCalculatorVolumeField', () => {
6
- it('emits value updates while preserving the current unit', async () => {
7
- const wrapper = mount(DoseCalculatorVolumeField, {
8
- props: {
9
- label: 'Final Volume',
10
- modelValue: { value: 1, unit: 'mL' },
11
- units: ['µL', 'mL', 'L'],
12
- },
13
- })
15
+ it('should emit value updates while preserving the current unit', async () => {
16
+ const wrapper = mountField()
14
17
 
15
18
  await wrapper.get('input').setValue('2.5')
16
19
 
17
- expect(wrapper.emitted('update:modelValue')?.at(-1)).toEqual([
18
- { value: 2.5, unit: 'mL' },
19
- ])
20
+ expect(wrapper.emitted('update:modelValue')?.at(-1)).toEqual([{ value: 2.5, unit: 'mL' }])
20
21
  })
21
22
 
22
- it('emits unit updates while preserving the current value', async () => {
23
- const wrapper = mount(DoseCalculatorVolumeField, {
24
- props: {
25
- label: 'Volume per Well',
26
- modelValue: { value: 100, unit: 'µL' },
27
- units: ['µL', 'mL', 'L'],
28
- },
29
- })
23
+ it('should emit unit updates while preserving the current value', () => {
24
+ const wrapper = mountField({ value: 100, unit: 'µL' })
30
25
 
31
- await wrapper.get('select').setValue('mL')
26
+ wrapper.findComponent(UnitInput).vm.$emit('update:unit', 'mL')
32
27
 
33
- expect(wrapper.emitted('update:modelValue')?.at(-1)).toEqual([
34
- { value: 100, unit: 'mL' },
35
- ])
28
+ expect(wrapper.emitted('update:modelValue')?.at(-1)).toEqual([{ value: 100, unit: 'mL' }])
36
29
  })
37
30
 
38
- it('ignores non-numeric value input', async () => {
39
- const wrapper = mount(DoseCalculatorVolumeField, {
40
- props: {
41
- label: 'Final Volume',
42
- modelValue: { value: 1, unit: 'mL' },
43
- units: ['µL', 'mL', 'L'],
44
- },
45
- })
31
+ it('should ignore an emptied value', async () => {
32
+ const wrapper = mountField()
46
33
 
47
- const input = wrapper.get('input')
48
- ;(input.element as HTMLInputElement).value = ''
49
- await input.trigger('input')
34
+ await wrapper.get('input').setValue('')
50
35
 
51
36
  expect(wrapper.emitted('update:modelValue')).toBeUndefined()
52
37
  })
38
+
39
+ it('should offer every volume unit in the UnitInput segment (6c)', () => {
40
+ const wrapper = mountField()
41
+
42
+ expect(wrapper.findComponent(UnitInput).props('units').map((u: { value: string }) => u.value)).toEqual(units)
43
+ })
44
+
45
+ it('should lay the field out as a FormField row (6c)', () => {
46
+ const wrapper = mountField()
47
+
48
+ expect(wrapper.findComponent(FormField).props('layout')).toBe('row')
49
+ })
50
+
51
+ it('should size the volume field to the 32px control height', () => {
52
+ const wrapper = mountField()
53
+
54
+ expect(wrapper.findComponent(UnitInput).props('size')).toBe('sm')
55
+ })
53
56
  })
@@ -13,11 +13,26 @@ describe('EmptyState', () => {
13
13
 
14
14
  const button = wrapper.find('.mint-button')
15
15
  expect(button.exists()).toBe(true)
16
- expect(button.classes()).toContain('mint-button--primary')
16
+ expect(button.classes()).toContain('mint-button--secondary')
17
17
  expect(button.text()).toBe('Create experiment')
18
18
 
19
19
  await button.trigger('click')
20
20
 
21
21
  expect(wrapper.emitted('action')).toHaveLength(1)
22
22
  })
23
+
24
+ it('should wrap default-slot content in the spaced content block', () => {
25
+ const wrapper = mount(EmptyState, {
26
+ props: { title: 'No instruments yet', description: 'Add the lab systems.' },
27
+ slots: { default: '<button class="slot-action">New instrument</button>' },
28
+ })
29
+
30
+ expect(wrapper.find('.mint-empty-state__content .slot-action').exists()).toBe(true)
31
+ })
32
+
33
+ it('should not render the content block without default-slot content', () => {
34
+ const wrapper = mount(EmptyState, { props: { title: 'Empty' } })
35
+
36
+ expect(wrapper.find('.mint-empty-state__content').exists()).toBe(false)
37
+ })
23
38
  })
@@ -104,7 +104,7 @@ describe('ExperimentSelectorModal', () => {
104
104
  experiments.value = [record]
105
105
  const wrapper = mountModal({ modelValue: true })
106
106
 
107
- await wrapper.find('.mint-experiment-selector__row').trigger('click')
107
+ await wrapper.find('.mint-resource-picker__row').trigger('click')
108
108
 
109
109
  const store = useExperimentStore()
110
110
  expect(store.current).toEqual(record)
@@ -115,7 +115,7 @@ describe('ExperimentSelectorModal', () => {
115
115
  experiments.value = [experiment()]
116
116
  const wrapper = mountModal({ modelValue: true })
117
117
 
118
- await wrapper.find('.mint-experiment-selector__row').trigger('click')
118
+ await wrapper.find('.mint-resource-picker__row').trigger('click')
119
119
 
120
120
  expect(wrapper.emitted('select')).toBeUndefined()
121
121
  })
@@ -124,11 +124,39 @@ describe('ExperimentSelectorModal', () => {
124
124
  experiments.value = [experiment()]
125
125
  const wrapper = mountModal({ modelValue: true })
126
126
 
127
- await wrapper.find('.mint-experiment-selector__row').trigger('click')
127
+ await wrapper.find('.mint-resource-picker__row').trigger('click')
128
128
 
129
129
  expect(wrapper.emitted('update:modelValue')).toEqual([[false]])
130
130
  })
131
131
 
132
+ it('should show the experiment code as a pill on the second line', () => {
133
+ experiments.value = [experiment()]
134
+ const wrapper = mountModal({ modelValue: true })
135
+
136
+ expect(wrapper.get('.mint-resource-picker__code').text()).toBe('EXP-007')
137
+ })
138
+
139
+ it('should state the status as text in the right-hand column', () => {
140
+ experiments.value = [experiment()]
141
+ const wrapper = mountModal({ modelValue: true })
142
+
143
+ expect(wrapper.get('.mint-resource-picker__aside').text()).toContain('Ongoing')
144
+ })
145
+
146
+ it('should tint the status with the experiment status variant', () => {
147
+ experiments.value = [experiment()]
148
+ const wrapper = mountModal({ modelValue: true })
149
+
150
+ expect(wrapper.get('.mint-resource-picker__status').classes()).toContain('mint-resource-picker__status--primary')
151
+ })
152
+
153
+ it('should fill the current experiment row', () => {
154
+ experiments.value = [experiment()]
155
+ const wrapper = mountModal({ modelValue: true, currentExperimentId: 7 })
156
+
157
+ expect(wrapper.find('.mint-resource-picker__row--selected').exists()).toBe(true)
158
+ })
159
+
132
160
  it('clears the shared store from the clear-selection footer', async () => {
133
161
  const store = useExperimentStore()
134
162
  store.select(experiment())
@@ -60,4 +60,49 @@ describe('ExperimentTimeline', () => {
60
60
 
61
61
  expect(wrapper.emitted('step-reorder')).toBeUndefined()
62
62
  })
63
+
64
+ describe('step progress (3d)', () => {
65
+ function mountWith(step: Partial<ProtocolStep>) {
66
+ const steps: ProtocolStep[] = [
67
+ { id: 'run', name: 'LC-MS', type: 'incubation', status: 'in_progress', order: 0, ...step },
68
+ ]
69
+ return mount(ExperimentTimeline, { props: { modelValue: steps } })
70
+ }
71
+
72
+ it('should render a progress bar when the in-progress step has progress', () => {
73
+ expect(mountWith({ progress: 35 }).find('[role="progressbar"]').exists()).toBe(true)
74
+ })
75
+
76
+ it('should expose the value on the progress bar when the step has progress', () => {
77
+ expect(mountWith({ progress: 35 }).find('[role="progressbar"]').attributes('aria-valuenow')).toBe('35')
78
+ })
79
+
80
+ it('should size the fill to the percent when the step has progress', () => {
81
+ expect(mountWith({ progress: 35 }).find('.mint-timeline__progress-fill').attributes('style')).toContain('width: 35%')
82
+ })
83
+
84
+ it('should show the percent as text when the step has progress', () => {
85
+ expect(mountWith({ progress: 35 }).find('.mint-timeline__progress-value').text()).toBe('35%')
86
+ })
87
+
88
+ it('should round the percent text when progress is fractional', () => {
89
+ expect(mountWith({ progress: 34.6 }).find('.mint-timeline__progress-value').text()).toBe('35%')
90
+ })
91
+
92
+ it('should clamp the percent when progress exceeds 100', () => {
93
+ expect(mountWith({ progress: 140 }).find('.mint-timeline__progress-value').text()).toBe('100%')
94
+ })
95
+
96
+ it('should clamp the percent when progress is negative', () => {
97
+ expect(mountWith({ progress: -5 }).find('.mint-timeline__progress-value').text()).toBe('0%')
98
+ })
99
+
100
+ it('should render no progress bar when the in-progress step has no progress', () => {
101
+ expect(mountWith({}).find('[role="progressbar"]').exists()).toBe(false)
102
+ })
103
+
104
+ it('should render no progress bar when the step is not in progress', () => {
105
+ expect(mountWith({ status: 'completed', progress: 100 }).find('[role="progressbar"]').exists()).toBe(false)
106
+ })
107
+ })
63
108
  })
@@ -31,7 +31,7 @@ function adapter(): PickerAdapter {
31
31
  }
32
32
  async function setup(data = adapter(), extra: Record<string, unknown> = {}) {
33
33
  const wrapper = mount(FilePicker, {
34
- props: { open: true, adapter: data, ...extra },
34
+ props: { open: true, adapter: data, view: 'tree', ...extra },
35
35
  global: { stubs: { teleport: true } },
36
36
  })
37
37
  await flushPromises()
@@ -131,7 +131,7 @@ it('late server responses cannot overwrite browser source metadata', async () =>
131
131
  }),
132
132
  )
133
133
  const wrapper = await setup(data, { sources: ['server', 'localFile'] })
134
- await wrapper.get('[aria-label="Local files"]').trigger('click')
134
+ await wrapper.findAll('[aria-label="Data source"] button').at(-1)!.trigger('click')
135
135
  await flushPromises()
136
136
  release([folder])
137
137
  await flushPromises()