@morscherlab/mint-sdk 1.2.10 → 1.3.0-beta.10

package/dist/types/auth.d.ts

@@ -16,30 +16,3 @@ export interface UserInfo {
     roleObj?: RoleInfo | null;
     isActive: boolean;
 }
-export interface LoginResponse {
-    access_token: string;
-    token_type: string;
-    expires_in: number;
-}
-export interface TokenVerifyResponse {
-    valid: boolean;
-    username: string | null;
-    expires_at: string | null;
-}
-export interface RegisterRequest {
-    username: string;
-    password: string;
-    email?: string;
-    shortname?: string;
-}
-export interface UpdateProfileRequest {
-    email?: string;
-    shortname?: string;
-    current_password?: string;
-    new_password?: string;
-}
-export interface CredentialInfo {
-    credential_id: string;
-    device_name: string | null;
-    created_at: string;
-}

package/dist/types/componentLabTypes.d.ts

@@ -1,7 +1,7 @@
 export type WellPlateFormat = 6 | 12 | 24 | 48 | 54 | 96 | 384;
 export type WellState = 'empty' | 'filled' | 'selected' | 'disabled';
 export type WellPlateSelectionMode = 'none' | 'single' | 'multiple' | 'rectangle' | 'drag';
-export type WellPlateSize = 'sm' | 'md' | 'lg' | 'xl' | 'fill';
+export type WellPlateSize = 'xs' | 'sm' | 'md' | 'lg' | 'xl' | 'fill';
 export type WellShape = 'circle' | 'rounded';
 export interface Well {
     id: string;
@@ -9,6 +9,8 @@ export interface Well {
     col: number;
     state: WellState;
     sampleType?: string;
+    /** Group id (PlateEditor `groups`); colors the well, while `sampleType` sets its marker shape. */
+    group?: string;
     value?: number;
     metadata?: Record<string, unknown>;
 }
@@ -81,13 +83,13 @@ export interface Rack {
     injectionVolume: number;
     wells: Record<string, Partial<Well>>;
 }
-export interface RackSampleDropContext {
-    rack: Rack;
-    rackId: string;
-    wellId: string;
-    event: DragEvent;
+/** PlateEditor `clearConfirm`: text and variant of the Clear confirmation; unset fields keep the defaults. */
+export interface PlateEditorClearConfirm {
+    title?: string;
+    message?: string;
+    confirmLabel?: string;
+    variant?: 'danger' | 'warning' | 'info';
 }
-export type RackSampleDropMapper = (data: WellSampleDropData, context: RackSampleDropContext) => WellEditData | null | undefined;
 export interface SampleType {
     id: string;
     name: string;
@@ -119,6 +121,11 @@ export interface ProtocolStep {
     status: ProtocolStepStatus;
     parameters?: Record<string, unknown>;
     order: number;
+    /**
+     * Percent complete, 0–100. ExperimentTimeline shows it as a 2px bar and a
+     * mono percent on the `in_progress` step only; out-of-range values clamp.
+     */
+    progress?: number;
 }
 export interface SampleGroup {
     name: string;

package/dist/types/componentWorkflowTypes.d.ts

@@ -42,6 +42,12 @@ export interface BatchSummary {
     percent: number;
 }
 export type TimePickerFormat = '12h' | '24h';
+/**
+ * Marks a time slot ("HH:mm") unavailable. Return `false`/nothing for an
+ * available slot, `true` to disable it, or a string to disable it and show
+ * that string inline as the reason (e.g. "Booked · HPLC-02").
+ */
+export type TimeSlotDisabledFn = (time: string) => boolean | string | null | undefined;
 export interface TimeRange {
     start: string;
     end: string;
@@ -146,5 +152,25 @@ export type FitState = 'idle' | 'running' | 'completed' | 'error';
 export interface FitResultSummary {
     label: string;
     value: string | number;
+    /** Icon of a verdict row: success = check, warning = triangle, error = filled circle. Values are never colored. */
     variant?: 'default' | 'success' | 'warning' | 'error';
+    /** Show the result as a verdict (icon + "label value") below the parameter table instead of as a table row. */
+    verdict?: boolean;
+    /** Unit shown in mono after the parameter name, never transformed (e.g. `'nM'`). */
+    unit?: string;
+    /** Preformatted 95% confidence interval (e.g. `'512 – 778'`). The CI column shows when any row has one. */
+    ci?: string;
+}
+/** One fitted series in a multi-series FitPanel. */
+export interface FitSeries {
+    label: string;
+    /** Group color token, `var(--mint-sample-1)` … `var(--mint-sample-8)`. Defaults to the series' position in that palette. */
+    color?: string;
+    results: FitResultSummary[];
+}
+/** Header labels of the FitPanel parameter table. */
+export interface FitColumnLabels {
+    parameter?: string;
+    value?: string;
+    ci?: string;
 }

package/dist/types/components.d.ts

@@ -7,6 +7,8 @@ interface ActionMenuItemBase {
     label: string;
     disabled?: boolean;
     danger?: boolean;
+    /** Set on every item to make the menu a single choice (`menuitemradio`); true marks the current one. */
+    checked?: boolean;
 }
 export type ActionMenuItem = (ActionMenuItemBase & {
     href?: never;
@@ -14,6 +16,8 @@ export type ActionMenuItem = (ActionMenuItemBase & {
 }) | (ActionMenuItemBase & {
     href: string;
     target?: '_self' | '_blank' | '_parent' | '_top';
+    /** Links navigate; only buttons can be single-choice items. */
+    checked?: never;
 });
 export type InputType = 'text' | 'password' | 'email' | 'number' | 'search' | 'tel' | 'url';
 export type ModalSize = 'sm' | 'md' | 'lg' | 'xl' | 'full';
@@ -33,6 +37,12 @@ export interface ModalTab {
     icon?: string | string[];
     /** Rail only — second line under the label; also shown as the pane subtitle. */
     description?: string;
+    /**
+     * Rail only — heading of the section this tab belongs to. A heading (and a
+     * divider after the first section) renders wherever the section changes, so
+     * keep tabs of one section adjacent.
+     */
+    section?: string;
     disabled?: boolean;
 }
 export type AlertType = 'success' | 'error' | 'warning' | 'info';
@@ -140,6 +150,8 @@ export interface TopBarSettingsConfig {
     title?: string;
     tabs?: SettingsTabInput[];
     showAppearance?: boolean;
+    /** List Appearance before the other tabs and open on it. */
+    appearanceFirst?: boolean;
     size?: 'md' | 'lg' | 'xl';
     layout?: SettingsModalLayout;
     /** Schema-driven config — when set, fields auto-render via SDK form components. */
@@ -164,6 +176,8 @@ export interface PillNavItem {
     to?: string;
     href?: string;
     disabled?: boolean;
+    /** Shows a small error-colored dot after the label (e.g. an unacknowledged critical alert). */
+    dot?: boolean;
     children?: PillNavOption[];
 }
 export type PillNavItemInput = (Omit<PillNavItem, 'children'> & {
@@ -179,20 +193,6 @@ export interface PageSelectorItem {
     disabled?: boolean;
 }
 export type PageSelectorItemInput = PageSelectorItem | string;
-export interface PluginSwitcherPlugin {
-    id: string;
-    label: string;
-    color?: string;
-    version?: string;
-    to?: string;
-    href?: string;
-}
-export interface PluginSwitcherInfo {
-    current: PluginSwitcherPlugin;
-    plugins?: PluginSwitcherPlugin[];
-    installHref?: string;
-    installTo?: string;
-}
 export interface AccountMenuItem {
     id: string;
     label: string;
@@ -203,14 +203,24 @@ export interface AccountMenuItem {
     danger?: boolean;
     divider?: boolean;
 }
-export type { WellPlateFormat, WellState, WellPlateSelectionMode, WellPlateSize, WellShape, Well, WellClassValue, WellClassResolver, WellStyleResolver, HeatmapColorScale, HeatmapConfig, SlotPosition, WellExtendedData, WellEditData, WellEditField, WellSampleDropData, WellSampleDropContext, WellSampleDropParser, WellLegendItem, PlateCondition, ColumnCondition, RowCondition, Rack, RackSampleDropContext, RackSampleDropMapper, SampleType, PlateMap, PlateMapEditorState, ProtocolStepType, ProtocolStepStatus, ProtocolStep, SampleGroup, GroupItem, FileUploaderMode, MoleculeData, StorageCondition, ReagentColumn, Reagent, TreeNodeType, BadgeVariant, TreeNode, } from './componentLabTypes';
+export type { WellPlateFormat, WellState, WellPlateSelectionMode, WellPlateSize, WellShape, Well, WellClassValue, WellClassResolver, WellStyleResolver, HeatmapColorScale, HeatmapConfig, SlotPosition, WellExtendedData, WellEditData, WellEditField, WellSampleDropData, WellSampleDropContext, WellSampleDropParser, WellLegendItem, PlateCondition, ColumnCondition, RowCondition, Rack, PlateEditorClearConfirm, SampleType, PlateMap, PlateMapEditorState, ProtocolStepType, ProtocolStepStatus, ProtocolStep, SampleGroup, GroupItem, FileUploaderMode, MoleculeData, StorageCondition, ReagentColumn, Reagent, TreeNodeType, BadgeVariant, TreeNode, } from './componentLabTypes';
 export interface SegmentedOption {
     value: string | number;
     label: string;
     description?: string;
     disabled?: boolean;
+    /** Color token for a swatch before the label, e.g. a group color `var(--mint-sample-2)`. */
+    color?: string;
 }
 export type SegmentedOptionInput = SegmentedOption | OptionPrimitive;
+/** One series in the ChartContainer header legend. */
+export interface ChartLegendItem {
+    label: string;
+    /** Swatch color, e.g. a group token `var(--mint-sample-1)` or a resolved color. */
+    color: string;
+    /** Series is toggled off (rendered dimmed, `aria-pressed="false"`). */
+    hidden?: boolean;
+}
 export type SegmentedControlVariant = 'simple' | 'card';
 export type SegmentedControlSize = 'sm' | 'md' | 'lg';
 export interface MultiSelectOption {
@@ -287,6 +297,18 @@ export interface DataFrameColumn<T = Record<string, unknown>> {
     ellipsis?: boolean;
     /** Custom formatter for cell values */
     formatter?: (value: unknown, row: T, index: number) => string;
+    /**
+     * Unit shown after the header label in its own mono element, never case-transformed
+     * (`'µM'`, `'mL'`, `'m/z'`). Keep it out of `label`.
+     */
+    unit?: string;
+    /**
+     * `'number'` renders cells right-aligned in mono with tabular figures (an explicit
+     * `align` still wins). Default `'text'`.
+     */
+    type?: 'text' | 'number';
+    /** Decimal places for numeric cell values (`toFixed`). Ignored when `formatter` is set. */
+    precision?: number;
 }
 /** Pagination state for table data */
 export interface PaginationState {
@@ -301,7 +323,6 @@ export type SpinnerSize = 'xs' | 'sm' | 'md' | 'lg';
 export type SpinnerVariant = 'primary' | 'cta' | 'muted';
 export type DividerSpacing = 'sm' | 'md' | 'lg';
 export type StatusType = 'success' | 'warning' | 'error' | 'info' | 'muted';
-export type ProgressVariant = 'rail' | 'segmented';
 export type ProgressColor = 'primary' | 'success' | 'warning' | 'error' | 'info';
 export type ProgressSize = 'sm' | 'md' | 'lg';
 export type AvatarSize = 'xs' | 'sm' | 'md' | 'lg' | 'xl';
@@ -327,6 +348,8 @@ export interface SettingsTab extends AccessControlled {
     description?: string;
     /** Optional monospace meta shown right of the tab label — a count, "2 unsaved", etc. */
     meta?: string;
+    /** Rail section heading for this tab when Appearance is shown; defaults to "Plugin". */
+    section?: string;
 }
 export type SettingsTabInput = SettingsTab | string;
 export type SettingsModalLayout = 'horizontal' | 'vertical';
@@ -358,4 +381,4 @@ export interface SettingsModalSchema {
 export type SettingsUserType = Exclude<AccessAudience, 'all'>;
 export type SettingsAudience = AccessAudience;
 export type SettingsAudienceInput = AccessAudienceInput;
-export type { NumberNotation, UnitOption, WizardStep, WizardStepState, AuditEntryType, AuditEntry, BatchItemStatus, BatchItem, BatchSummary, TimePickerFormat, TimeRange, ScheduleView, ScheduleEventStatus, ScheduleEvent, ScheduleBlockedSlot, ScheduleSlotContext, ScheduleEventCreateContext, ScheduleEventUpdateContext, SummarySectionItem, SummarySection, SummaryData, ResourceStatus, ResourceSpec, ExperimentStatus, DatePreset, ExperimentSortField, ExperimentTypeOption, ExperimentSummary, ExperimentListResponse, ExperimentFilters, FitState, FitResultSummary, } from './componentWorkflowTypes';
+export type { NumberNotation, UnitOption, WizardStep, WizardStepState, AuditEntryType, AuditEntry, BatchItemStatus, BatchItem, BatchSummary, TimePickerFormat, TimeSlotDisabledFn, TimeRange, ScheduleView, ScheduleEventStatus, ScheduleEvent, ScheduleBlockedSlot, ScheduleSlotContext, ScheduleEventCreateContext, ScheduleEventUpdateContext, SummarySectionItem, SummarySection, SummaryData, ResourceStatus, ResourceSpec, ExperimentStatus, DatePreset, ExperimentSortField, ExperimentTypeOption, ExperimentSummary, ExperimentListResponse, ExperimentFilters, FitState, FitResultSummary, FitSeries, FitColumnLabels, } from './componentWorkflowTypes';

package/dist/types/fileBrowserTypes.d.ts

@@ -75,3 +75,16 @@ export interface FileBrowserLocation {
     mount_id: string;
     path: string;
 }
+/** Several directory levels in one response, parents before children. */
+export interface FileDirectoryTree {
+    listings?: FileDirectoryListing[];
+    /** True when the server's entry budget stopped before the requested depth. */
+    truncated?: boolean;
+}
+/** Entries whose name contains a query, below one directory. */
+export interface FileSearchResult {
+    entries?: FileEntry[];
+    searched_directories?: number;
+    /** True when a directory, result or time budget ended the search early. */
+    truncated?: boolean;
+}

package/dist/types/filePicker.d.ts

@@ -1,12 +1,18 @@
 /** Sources are supplied by the host; the SDK never infers a host filesystem path. */
 export type PickerSource = 'server' | 'localFile';
 export type PickerSelectionMode = 'single-file' | 'multi-file' | 'folder' | 'folder+files';
+/** `list` shows one folder at a time (the default); `tree` adds disclosure triangles. */
+export type PickerView = 'list' | 'tree';
+/** Row order inside each folder; folders always come before files. */
+export type PickerSort = 'newest' | 'oldest' | 'name' | 'name-desc';
 interface PickerNodeBase {
     path: string;
     name: string;
     parentPath?: string | null;
     parentName?: string;
     bytes?: number | null;
+    /** ISO timestamp of the last change, shown in the list and the preview. */
+    modifiedAt?: string | null;
     /** An explicit adapter failure makes a row inert, including its disclosure. */
     unavailableReason?: string;
 }
@@ -34,7 +40,19 @@ export interface PickerRequest {
      */
     refresh?: true;
 }
+/** What a search found before a server or walk limit stopped it. */
+export interface PickerSearchResult {
+    nodes: PickerNode[];
+    truncated: boolean;
+}
 export interface PickerAdapter {
+    /**
+     * `listRoot()` returns mount points. FilePicker then shows them as header
+     * sources and opens the first reachable one instead of listing the root.
+     */
+    mounts?: boolean;
+    /** The path of the mount holding `path`, so an initial folder inside a mount can name it. */
+    mountOf?(path: string): string | undefined;
     /** Discard cached and pending results on close, source changes, or refresh. */
     invalidate?(): void;
     listRoot(request?: PickerRequest): Promise<PickerNode[]>;
@@ -42,7 +60,7 @@ export interface PickerAdapter {
     search(query: string, scope: {
         path: string;
         recursive: boolean;
-    }, request?: PickerRequest): Promise<PickerNode[]>;
+    }, request?: PickerRequest): Promise<PickerNode[] | PickerSearchResult>;
 }
 export interface PickerCapability {
     /** Case-insensitive suffixes, including compound extensions such as mzML.gz. */

package/dist/types/generated-ui.d.ts

@@ -41,6 +41,19 @@ export interface PluginJobPathInput {
     rootName?: string;
     signal?: AbortSignal;
 }
+/**
+ * An existing file-backed analysis artifact chosen for a `Path` field. Only
+ * the database ids reach the plugin; it resolves, re-authorizes, and copies
+ * the file into job staging when the job is submitted.
+ */
+export interface PluginJobArtifactPathInput {
+    kind: 'artifact-path';
+    experimentId: number;
+    artifactId: number;
+    name: string;
+    signal?: AbortSignal;
+}
+export type PluginJobPathSelection = PluginJobPathInput | PluginJobArtifactPathInput;
 export interface PluginJobPathUpload {
     token: string;
     kind: 'file' | 'directory';

package/dist/types/index.d.ts

@@ -1,14 +1,14 @@
-export type { ContainerDirection, ButtonVariant, ButtonSize, ActionMenuItem, InputType, ModalSize, ModalVariant, ModalLayout, ModalTab, AlertType, Toast, ToastAction, ToastOptions, TabItem, TabItemInput, OptionPrimitive, SelectOption, SelectOptionInput, RadioOption, RadioOptionInput, FormFieldProps, SectionCardAccent, SectionCardDivider, SidebarBadgeTone, SidebarToolSection, SidebarToolSectionAction, CollapsibleState, TopBarVariant, TopBarSettingsConfig, PillNavOption, PillNavOptionInput, PillNavItem, PillNavItemInput, PageSelectorItem, PageSelectorItemInput, PluginSwitcherPlugin, PluginSwitcherInfo, AccountMenuItem, WellPlateFormat, WellState, WellPlateSelectionMode, WellPlateSize, WellShape, Well, WellClassValue, WellClassResolver, WellStyleResolver, HeatmapColorScale, HeatmapConfig, SlotPosition, WellExtendedData, WellEditData, WellEditField, WellSampleDropData, WellSampleDropContext, WellSampleDropParser, WellLegendItem, PlateCondition, ColumnCondition, RowCondition, Rack, RackSampleDropContext, RackSampleDropMapper, SampleType, PlateMap, PlateMapEditorState, ProtocolStepType, ProtocolStepStatus, ProtocolStep, SampleGroup, GroupItem, FileUploaderMode, SegmentedOption, SegmentedOptionInput, SegmentedControlVariant, SegmentedControlSize, MultiSelectOption, MultiSelectOptionInput, MultiSelectSize, PillVariant, PillColor, PillSize, CalendarSelectionMode, CalendarMarker, CalendarDayContext, SortDirection, SortState, DataFrameColumn, PaginationState, SpinnerSize, SpinnerVariant, DividerSpacing, StatusType, ProgressVariant, ProgressSize, AvatarSize, EmptyStateColor, EmptyStateSize, BreadcrumbItem, BreadcrumbItemInput, TooltipPosition, ConfirmVariant, SettingsTab, SettingsTabInput, SettingsModalLayout, SettingsGroup, SettingsModalSchema, SettingsUserType, SettingsAudience, SettingsAudienceInput, NumberNotation, UnitOption, WizardStep, WizardStepState, AuditEntryType, AuditEntry, BatchItemStatus, BatchItem, BatchSummary, TimePickerFormat, TimeRange, ScheduleView, ScheduleEventStatus, ScheduleEvent, ScheduleBlockedSlot, ScheduleSlotContext, ScheduleEventCreateContext, ScheduleEventUpdateContext, SummarySectionItem, SummarySection, SummaryData, ResourceStatus, ResourceSpec, MoleculeData, ExperimentStatus, DatePreset, ExperimentSortField, ExperimentTypeOption, ExperimentSummary, ExperimentListResponse, ExperimentFilters, FitState, FitResultSummary, StorageCondition, ReagentColumn, Reagent, TreeNodeType, BadgeVariant, TreeNode, } from './components';
+export type { ContainerDirection, ButtonVariant, ButtonSize, ActionMenuItem, InputType, ModalSize, ModalVariant, ModalLayout, ModalTab, AlertType, Toast, ToastAction, ToastOptions, TabItem, TabItemInput, OptionPrimitive, SelectOption, SelectOptionInput, RadioOption, RadioOptionInput, FormFieldProps, SectionCardAccent, SectionCardDivider, SidebarBadgeTone, SidebarToolSection, SidebarToolSectionAction, CollapsibleState, TopBarVariant, TopBarSettingsConfig, PillNavOption, PillNavOptionInput, PillNavItem, PillNavItemInput, PageSelectorItem, PageSelectorItemInput, AccountMenuItem, WellPlateFormat, WellState, WellPlateSelectionMode, WellPlateSize, WellShape, Well, WellClassValue, WellClassResolver, WellStyleResolver, HeatmapColorScale, HeatmapConfig, SlotPosition, WellExtendedData, WellEditData, WellEditField, WellSampleDropData, WellSampleDropContext, WellSampleDropParser, WellLegendItem, PlateCondition, ColumnCondition, RowCondition, Rack, PlateEditorClearConfirm, SampleType, PlateMap, PlateMapEditorState, ProtocolStepType, ProtocolStepStatus, ProtocolStep, SampleGroup, GroupItem, FileUploaderMode, SegmentedOption, SegmentedOptionInput, ChartLegendItem, SegmentedControlVariant, SegmentedControlSize, MultiSelectOption, MultiSelectOptionInput, MultiSelectSize, PillVariant, PillColor, PillSize, CalendarSelectionMode, CalendarMarker, CalendarDayContext, SortDirection, SortState, DataFrameColumn, PaginationState, SpinnerSize, SpinnerVariant, DividerSpacing, StatusType, ProgressSize, AvatarSize, EmptyStateColor, EmptyStateSize, BreadcrumbItem, BreadcrumbItemInput, TooltipPosition, ConfirmVariant, SettingsTab, SettingsTabInput, SettingsModalLayout, SettingsGroup, SettingsModalSchema, SettingsUserType, SettingsAudience, SettingsAudienceInput, NumberNotation, UnitOption, WizardStep, WizardStepState, AuditEntryType, AuditEntry, BatchItemStatus, BatchItem, BatchSummary, TimePickerFormat, TimeSlotDisabledFn, TimeRange, ScheduleView, ScheduleEventStatus, ScheduleEvent, ScheduleBlockedSlot, ScheduleSlotContext, ScheduleEventCreateContext, ScheduleEventUpdateContext, SummarySectionItem, SummarySection, SummaryData, ResourceStatus, ResourceSpec, MoleculeData, ExperimentStatus, DatePreset, ExperimentSortField, ExperimentTypeOption, ExperimentSummary, ExperimentListResponse, ExperimentFilters, FitState, FitResultSummary, FitSeries, FitColumnLabels, StorageCondition, ReagentColumn, Reagent, TreeNodeType, BadgeVariant, TreeNode, } from './components';
 export type * from './generated-ui';
 export type { AnalysisArtifactStatus, AnalysisArtifactStatusFilter, AnalysisArtifactSummary, AnalysisArtifactDetail, AnalysisArtifactListResponse, AnalysisArtifactTarget, AnalysisArtifactMetadataUpdate, ArtifactSaveMode, ArtifactFileSource, JsonArtifactSavePayload, FileArtifactCreatePayload, FileArtifactUpdatePayload, HandlerFileArtifactCreatePayload, HandlerFileArtifactUpdatePayload, ArtifactSavePayload, HandlerArtifactSavePayload, ArtifactSaveDialogPayload, ArtifactSaveResult, ArtifactSaveHandler, HandlerArtifactSaveHandler, ArtifactSaveDialogHandler, } from './analysisArtifactTypes';
 export { ANALYSIS_FILE_ARTIFACT_SCHEMA } from './analysisArtifactTypes';
-export type { FileBrowserLocation, FileBrowserSortKey, FileDirectoryListing, FileEntry, FileEntryKind, FilePathCrumb, FileSelection, ServerMount, } from './fileBrowserTypes';
+export type { FileBrowserLocation, FileBrowserSortKey, FileDirectoryListing, FileDirectoryTree, FileEntry, FileEntryKind, FilePathCrumb, FileSearchResult, FileSelection, ServerMount, } from './fileBrowserTypes';
 export type { JobListPayload, JobProgress, JobSnapshotPayload, JobState, JobStateInput, JobStatus, JobStreamData, } from './jobs';
-export type { InstrumentAlert, InstrumentAlertBody, InstrumentAlertLevel, InstrumentState, InstrumentStatus, SampleInfo, SampleInfo as InstrumentSampleInfo, SequenceProgress, } from './instrument';
+export type { InstrumentAlert, InstrumentAlertLevel, InstrumentAlertList, InstrumentBadgeState, InstrumentLiveProgress, InstrumentLiveStatus, InstrumentState, InstrumentStatus, InstrumentStatusReporter, SampleInfo, SampleInfo as InstrumentSampleInfo, SequenceProgress, } from './instrument';
 export type { LcmsContainerType, LcmsPolarity, LcmsSequenceItem, LcmsSequenceTableColumn, } from '../lcms';
 export type { AccessAudience, AccessAudienceInput, AccessPolicy, AccessControlled, PermissionUser, RoleInfo, } from '../permissions';
 export type { FormFieldType, FieldCondition, FieldValidation, FormFieldSchema, FormOptionInput, FormSectionSchema, FormStepSchema, FormSchema, FieldEnhancement, FormEnhancements, UseFormBuilderReturn, } from './form-builder';
 export type { OutlierAction, InputMode, OutlierInfo, ColumnInfo, MetadataRow, AutoGroupResult, ParsedCsvData, } from './auto-group';
-export type { AuthConfig, UserInfo, LoginResponse, TokenVerifyResponse, RegisterRequest, UpdateProfileRequest, CredentialInfo, } from './auth';
+export type { AuthConfig, UserInfo, } from './auth';
 export type { PluginInfo, PluginNavItem, PluginSettings, PluginSettingField, PlatformContext, PlatformContextOptions, PlatformEventType, PlatformEvent, ThemeMode, ColorPalette, TableDensity, UserSummary, } from './platform';
 export type * from './filePicker';

package/dist/types/index.js

@@ -1,2 +1,2 @@
-import { t as ANALYSIS_FILE_ARTIFACT_SCHEMA } from "../analysisArtifactTypes-DQ0MjwHZ.js";
+import { t as ANALYSIS_FILE_ARTIFACT_SCHEMA } from "../analysisArtifactTypes-Cy3D0Ipg.js";
 export { ANALYSIS_FILE_ARTIFACT_SCHEMA };

package/dist/types/instrument.d.ts

@@ -19,6 +19,7 @@ export interface SequenceProgress {
     estimated_finish_time?: string | Date | null;
     sample_durations?: readonly number[];
 }
+/** @deprecated Scheduled for removal in MINT 1.4; instrument monitor types move to the mld-ms plugins. */
 export interface InstrumentStatus {
     instrument_id: string;
     instrument_name?: string | null;
@@ -35,23 +36,50 @@ export interface InstrumentStatus {
     current_raw_file?: string | null;
     method_elapsed_pct?: number | null;
 }
-export interface InstrumentAlertBody {
-    source?: string | null;
-    event?: string | null;
-    detail: string;
-    code?: number | null;
-    raw_file?: string | null;
+/** A state the platform derives for an instrument: its reported state, `never` (no report yet) or `inactive`. */
+export type InstrumentBadgeState = InstrumentState | 'never' | 'inactive';
+/** Sequence progress in a live status report; `sample_durations` covers the current sequence only. */
+export type InstrumentLiveProgress = SequenceProgress & {
+    elapsed_seconds: number;
+    sample_durations: number[];
+};
+/** The plugin that reported a live status, resolved from the plugin registry at read time. */
+export interface InstrumentStatusReporter {
+    name: string;
+    display_name: string;
+    route_prefix: string;
+    serves_instrument_alerts: boolean;
 }
+/** Latest live snapshot the platform holds for one instrument (`InstrumentRecord.live_status`). */
+export interface InstrumentLiveStatus {
+    instrument_id: string;
+    /** `disconnected` once `last_seen` is older than 60 s. */
+    state: InstrumentState;
+    active_method?: string | null;
+    current_sample?: SampleInfo | null;
+    sequence_progress?: InstrumentLiveProgress | null;
+    has_unacknowledged_alerts: boolean;
+    has_unacknowledged_critical: boolean;
+    /** Server receive time of the latest report (ISO 8601). */
+    last_seen: string;
+    /** When the state last changed (ISO 8601). */
+    state_since: string;
+    reported_by: string;
+    /** Null when the reporting plugin is not loaded. */
+    reporter: InstrumentStatusReporter | null;
+}
+/** An alert served by the reporting plugin at `{route_prefix}/api/instruments/{id}/alerts`. */
 export interface InstrumentAlert {
-    id?: string;
-    event_key: string;
+    id: string;
     instrument_id: string;
-    instrument_name?: string | null;
     level: InstrumentAlertLevel;
-    rule?: string;
-    message?: string | null;
-    body?: InstrumentAlertBody | null;
-    context?: Record<string, unknown>;
-    timestamp?: string | Date;
-    acknowledged?: boolean;
+    message: string;
+    timestamp: string;
+    acknowledged: boolean;
+    acknowledged_by?: string | null;
+    acknowledged_at?: string | null;
+}
+export interface InstrumentAlertList {
+    alerts: InstrumentAlert[];
+    total: number;
 }

package/dist/types/platform.d.ts

@@ -2,6 +2,8 @@ import { RoleInfo } from '../permissions';
 export interface PluginInfo {
     id: string;
     name: string;
+    /** Name to show in the UI; the platform falls back to the plugin ID. Absent before MINT 1.3. */
+    display_name?: string;
     version: string;
     plugin_type?: string;
     description?: string;

package/dist/utils/color.d.ts

@@ -5,7 +5,12 @@ import { SlotPosition } from '../types/componentLabTypes';
  */
 export declare const SAMPLE_COLOR_SCALE: readonly string[];
 /**
- * Slot-position colors shared by `PlateMapEditor` and `RackEditor`.
+ * Group palette as CSS tokens (3a): groups always take `--mint-sample-1` …
+ * `--mint-sample-8`; the 9th (gray) stays out of the group cycle.
+ */
+export declare const SAMPLE_GROUP_TOKENS: readonly string[];
+/**
+ * Slot-position colors (R/G/B/Y rack positions).
  * Mirrors `--mint-slot-r`, `--mint-slot-g`, `--mint-slot-b`, `--mint-slot-y`.
  */
 export declare const SLOT_COLORS: Record<SlotPosition, string>;

package/dist/utils/formModelSync.d.ts

@@ -3,3 +3,4 @@ export declare function recordValuesEqualForKeys(left: Record<string, unknown>,
 export declare function pickRecordKeys(source: Record<string, unknown>, keys: readonly string[]): Record<string, unknown>;
 export declare function pickExistingRecordKeys(source: Record<string, unknown>, keys: readonly string[]): Record<string, unknown>;
 export declare function formSchemaFieldNames(schema: FormSchema): string[];
+export declare function valuesEqual(left: unknown, right: unknown): boolean;

package/dist/utils/plotlyTemplate.d.ts

@@ -0,0 +1,3 @@
+import { Template } from 'plotly.js-dist-min';
+/** Resolve tokens from `element` (default: `<html>`), falling back to `<html>` for detached elements. */
+export declare function mintPlotlyTemplate(element?: Element): Template;

package/dist/utils/rack.d.ts

@@ -1,6 +1,9 @@
 import { Rack, SlotPosition, WellEditData, WellPlateFormat } from '../types';
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export type LcmsPlateType = '96well' | '54vial';
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export type LcmsControlSampleType = 'blank' | 'qc' | 'iqc';
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export interface LcmsPlateCell {
     row: string;
     column: number;
@@ -11,6 +14,7 @@ export interface LcmsPlateCell {
     custom_method?: string | null;
     slot?: SlotPosition | null;
 }
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export interface LcmsPlateCellsToRackOptions {
     rackId?: string;
     rackName?: string;
@@ -19,27 +23,39 @@ export interface LcmsPlateCellsToRackOptions {
     slot?: SlotPosition;
     injectionVolume?: number;
 }
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export interface LcmsPlateCellsToRacksOptions extends Omit<LcmsPlateCellsToRackOptions, 'rackId' | 'rackName' | 'slot'> {
     defaultSlot?: SlotPosition;
     rackId?: (slot: SlotPosition, index: number) => string;
     rackName?: (slot: SlotPosition, index: number) => string;
 }
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare const LCMS_DEFAULT_CONTROL_POSITIONS: Record<LcmsPlateType, Record<LcmsControlSampleType, {
     row: string;
     column: number;
 }>>;
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function lcmsPlateTypeToRackFormat(plateType: LcmsPlateType): WellPlateFormat;
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function rackFormatToLcmsPlateType(format: WellPlateFormat): LcmsPlateType;
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function lcmsWellId(row: string, column: number): string;
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function parseLcmsWellId(wellId: string): {
     row: string;
     column: number;
 };
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function lcmsPlateCellsToRack(cells: LcmsPlateCell[], options?: LcmsPlateCellsToRackOptions): Rack;
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function lcmsPlateCellsToRacks(cells: LcmsPlateCell[], options?: LcmsPlateCellsToRacksOptions): Rack[];
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function rackToLcmsPlateCells(rack: Rack): LcmsPlateCell[];
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function racksToLcmsPlateCells(racks: Rack[]): LcmsPlateCell[];
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function getLcmsDefaultControlWellId(plateType: LcmsPlateType, sampleType: LcmsControlSampleType): string;
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function createLcmsControlWellEditData(sampleType: LcmsControlSampleType, options?: {
     wellId?: string;
     plateType?: LcmsPlateType;

package/dist/utils/sampleTypeMarker.d.ts

@@ -0,0 +1,23 @@
+/**
+ * Sample-type marker (SDK control refresh 3a): color encodes the group, shape
+ * encodes the type.
+ *
+ * - sample: group fill (28% tint) + 1px group outline
+ * - blank:  dashed hollow ring, no group color
+ * - qc:     neutral solid ring + "Q"
+ * - iqc:    group fill + "i"
+ *
+ * `groupColor` must be a group token, `var(--mint-sample-1)` … `var(--mint-sample-8)`.
+ * The caller owns geometry (size, radius, glyph font); this returns colors only.
+ */
+export type SampleMarkerType = 'sample' | 'blank' | 'qc' | 'iqc';
+export interface SampleTypeMarker {
+    style: {
+        background: string;
+        border: string;
+        color: string;
+    };
+    glyph: 'Q' | 'i' | null;
+}
+/** `type` is matched case-insensitively; anything unrecognised renders as a sample. */
+export declare function sampleTypeMarker(type: SampleMarkerType | (string & {}), groupColor: string): SampleTypeMarker;