@mat3ra/esse 2026.5.18-2 → 2026.5.27-0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/js/esse/JSONSchemasGenerator.d.ts +2 -1
- package/dist/js/esse/JSONSchemasGenerator.js +1 -1
- package/dist/js/esse/JSONSchemasInterface.d.ts +1 -1
- package/dist/js/esse/JSONSchemasInterface.js +1 -1
- package/dist/js/esse/JSONSchemasInterfaceServer.js +3 -2
- package/dist/js/esse/schemaUtils.d.ts +1 -1
- package/dist/js/esse/schemaUtils.js +2 -1
- package/dist/js/esse/server/utils.d.ts +12 -0
- package/dist/js/esse/server/utils.js +68 -0
- package/dist/js/esse/utils.d.ts +0 -11
- package/dist/js/esse/utils.js +3 -60
- package/dist/js/example/job.json +38 -11
- package/dist/js/example/material.json +7 -1
- package/dist/js/example/materials_category/compound_pristine_structures/two_dimensional/interface/configuration.json +35 -5
- package/dist/js/example/materials_category/defective_structures/one_dimensional/grain_boundary_linear/configuration.json +28 -4
- package/dist/js/example/materials_category/defective_structures/two_dimensional/adatom/configuration.json +28 -4
- package/dist/js/example/materials_category/defective_structures/two_dimensional/grain_boundary_planar/configuration.json +35 -5
- package/dist/js/example/materials_category/defective_structures/two_dimensional/island/configuration.json +42 -6
- package/dist/js/example/materials_category/defective_structures/two_dimensional/terrace/configuration.json +42 -6
- package/dist/js/example/materials_category/defective_structures/zero_dimensional/point_defect/base_configuration.json +14 -2
- package/dist/js/example/materials_category/defective_structures/zero_dimensional/point_defect/interstitial.json +14 -2
- package/dist/js/example/materials_category/defective_structures/zero_dimensional/point_defect/substitutional.json +14 -2
- package/dist/js/example/materials_category/defective_structures/zero_dimensional/point_defect/vacancy.json +7 -1
- package/dist/js/example/materials_category/pristine_structures/two_dimensional/nanoribbon.json +21 -3
- package/dist/js/example/materials_category/pristine_structures/two_dimensional/nanotape.json +14 -2
- package/dist/js/example/materials_category/pristine_structures/two_dimensional/slab.json +14 -2
- package/dist/js/example/materials_category/pristine_structures/two_dimensional/slab_strained_supercell.json +14 -2
- package/dist/js/example/materials_category/processed_structures/two_dimensional/passivation/configuration.json +28 -4
- package/dist/js/example/materials_category_components/entities/auxiliary/zero_dimensional/crystal_site.json +7 -1
- package/dist/js/example/materials_category_components/entities/auxiliary/zero_dimensional/point_defect_site.json +7 -1
- package/dist/js/example/materials_category_components/entities/core/three_dimensional/crystal.json +7 -1
- package/dist/js/example/materials_category_components/entities/core/two_dimensional/vacuum.json +7 -1
- package/dist/js/example/materials_category_components/entities/reusable/one_dimensional/crystal_lattice_lines.json +7 -1
- package/dist/js/example/materials_category_components/entities/reusable/one_dimensional/crystal_lattice_lines_unique_repeated.json +7 -1
- package/dist/js/example/materials_category_components/entities/reusable/two_dimensional/slab_stack_configuration.json +28 -4
- package/dist/js/example/materials_category_components/operations/core/combinations/merge.json +14 -2
- package/dist/js/example/materials_category_components/operations/core/combinations/stack.json +14 -2
- package/dist/js/example/materials_category_components/operations/core/modifications/perturb.json +7 -1
- package/dist/js/example/model.json +2 -1
- package/dist/js/example/software/application.json +1 -0
- package/dist/js/example/software/executable.json +3 -4
- package/dist/js/example/software/flavor.json +9 -2
- package/dist/js/example/software/template.json +5 -8
- package/dist/js/example/software_directory/modeling/espresso.json +2 -1
- package/dist/js/example/software_directory/modeling/nwchem.json +3 -1
- package/dist/js/example/software_directory/modeling/unit/execution.json +57 -15
- package/dist/js/example/software_directory/modeling/vasp.json +2 -1
- package/dist/js/example/software_directory/scripting/jupyter_lab.json +2 -1
- package/dist/js/example/software_directory/scripting/python.json +2 -1
- package/dist/js/example/software_directory/scripting/shell.json +2 -1
- package/dist/js/example/software_directory/scripting/unit/execution.json +57 -15
- package/dist/js/example/system/runtime_items.json +14 -0
- package/dist/js/example/workflow/subworkflow.json +32 -10
- package/dist/js/example/workflow/unit/assignment.json +5 -1
- package/dist/js/example/workflow/unit/condition.json +5 -1
- package/dist/js/example/workflow/unit/execution.json +29 -9
- package/dist/js/example/workflow/unit/io/api.json +1 -0
- package/dist/js/example/workflow/unit/io/db_collection.json +5 -0
- package/dist/js/example/workflow/unit/io/db_ids.json +6 -0
- package/dist/js/example/workflow/unit/io/object_storage.json +2 -1
- package/dist/js/example/workflow/unit/io.json +22 -2
- package/dist/js/example/workflow/unit/map.json +5 -1
- package/dist/js/example/workflow/unit/reduce.json +5 -1
- package/dist/js/example/workflow.json +38 -11
- package/dist/js/schema/apse/file/applications/espresso/7.2/pw.x/atomic_species.json +5 -0
- package/dist/js/schema/apse/file/applications/espresso/7.2/pw.x.json +5 -0
- package/dist/js/schema/context_providers_directory/by_application/nwchem_total_energy_context_provider.json +7 -1
- package/dist/js/schema/context_providers_directory/by_application/qe_neb_context_provider.json +164 -6
- package/dist/js/schema/context_providers_directory/by_application/qe_pwx_base_context_provider.json +10 -0
- package/dist/js/schema/context_providers_directory/by_application/qe_pwx_context_provider.json +17 -1
- package/dist/js/schema/context_providers_directory/by_application/vasp_context_provider.json +7 -1
- package/dist/js/schema/context_providers_directory/by_application/vasp_neb_context_provider.json +7 -1
- package/dist/js/schema/context_providers_directory/collinear_magnetization_context_provider.json +14 -0
- package/dist/js/schema/context_providers_directory/non_collinear_magnetization_context_provider.json +7 -0
- package/dist/js/schema/context_providers_directory/points_grid_data_provider.json +23 -6
- package/dist/js/schema/context_providers_directory/points_path_data_provider.json +6 -2
- package/dist/js/schema/context_providers_directory/points_path_data_provider_rendering.json +32 -0
- package/dist/js/schema/core/primitive/linked_list/named_node.json +2 -1
- package/dist/js/schema/core/primitive/linked_list/named_node_in_group.json +2 -1
- package/dist/js/schema/core/primitive/linked_list.json +4 -2
- package/dist/js/schema/in_memory_entity/has_consistency_check_has_metadata_named_defaultable.json +3 -0
- package/dist/js/schema/in_memory_entity/named.json +3 -0
- package/dist/js/schema/in_memory_entity/named_defaultable.json +3 -0
- package/dist/js/schema/in_memory_entity/named_defaultable_has_metadata.json +3 -0
- package/dist/js/schema/in_memory_entity/named_defaultable_runtime_items.json +3 -0
- package/dist/js/schema/job/base.json +133 -132
- package/dist/js/schema/job/compute.json +1 -1
- package/dist/js/schema/job/compute_property.json +182 -0
- package/dist/js/schema/job.json +3829 -4566
- package/dist/js/schema/material/material_properties.json +736 -0
- package/dist/js/schema/material/metadata/boundary_conditions.json +32 -0
- package/dist/js/schema/material/metadata/bulk_properties.json +13 -0
- package/dist/js/schema/material/metadata/slab_properties.json +41 -0
- package/dist/js/schema/material/metadata.json +101 -0
- package/dist/js/schema/material.json +117 -27
- package/dist/js/schema/materials_category/compound_pristine_structures/two_dimensional/interface/configuration.json +1069 -268
- package/dist/js/schema/materials_category/defective_structures/one_dimensional/grain_boundary_linear/configuration.json +1069 -268
- package/dist/js/schema/materials_category/defective_structures/two_dimensional/adatom/configuration.json +464 -108
- package/dist/js/schema/materials_category/defective_structures/two_dimensional/grain_boundary_planar/configuration.json +1069 -268
- package/dist/js/schema/materials_category/defective_structures/two_dimensional/island/configuration.json +698 -164
- package/dist/js/schema/materials_category/defective_structures/two_dimensional/terrace/configuration.json +698 -164
- package/dist/js/schema/materials_category/defective_structures/zero_dimensional/point_defect/base_configuration.json +116 -27
- package/dist/js/schema/materials_category/defective_structures/zero_dimensional/point_defect/interstitial.json +232 -54
- package/dist/js/schema/materials_category/defective_structures/zero_dimensional/point_defect/substitutional.json +232 -54
- package/dist/js/schema/materials_category/defective_structures/zero_dimensional/point_defect/vacancy.json +116 -27
- package/dist/js/schema/materials_category/pristine_structures/three_dimensional/ideal_crystal.json +116 -27
- package/dist/js/schema/materials_category/pristine_structures/two_dimensional/nanoribbon.json +348 -81
- package/dist/js/schema/materials_category/pristine_structures/two_dimensional/nanotape.json +232 -54
- package/dist/js/schema/materials_category/pristine_structures/two_dimensional/slab.json +232 -54
- package/dist/js/schema/materials_category/pristine_structures/two_dimensional/slab_strained_supercell.json +232 -54
- package/dist/js/schema/materials_category/processed_structures/two_dimensional/passivation/configuration.json +233 -54
- package/dist/js/schema/materials_category_components/entities/auxiliary/zero_dimensional/crystal_site.json +116 -27
- package/dist/js/schema/materials_category_components/entities/auxiliary/zero_dimensional/point_defect_site.json +116 -27
- package/dist/js/schema/materials_category_components/entities/auxiliary/zero_dimensional/void_region.json +116 -27
- package/dist/js/schema/materials_category_components/entities/core/three_dimensional/crystal.json +116 -27
- package/dist/js/schema/materials_category_components/entities/core/two_dimensional/vacuum.json +116 -27
- package/dist/js/schema/materials_category_components/entities/reusable/one_dimensional/crystal_lattice_lines.json +116 -27
- package/dist/js/schema/materials_category_components/entities/reusable/one_dimensional/crystal_lattice_lines_unique_repeated.json +116 -27
- package/dist/js/schema/materials_category_components/entities/reusable/three_dimensional/crystal_lattice_base.json +116 -27
- package/dist/js/schema/materials_category_components/entities/reusable/three_dimensional/strained_non_uniform.json +116 -27
- package/dist/js/schema/materials_category_components/entities/reusable/three_dimensional/strained_uniform.json +116 -27
- package/dist/js/schema/materials_category_components/entities/reusable/three_dimensional/supercell.json +116 -27
- package/dist/js/schema/materials_category_components/entities/reusable/two_dimensional/atomic_layers.json +116 -27
- package/dist/js/schema/materials_category_components/entities/reusable/two_dimensional/atomic_layers_unique.json +116 -27
- package/dist/js/schema/materials_category_components/entities/reusable/two_dimensional/atomic_layers_unique_repeated.json +116 -27
- package/dist/js/schema/materials_category_components/entities/reusable/two_dimensional/crystal_lattice_planes.json +116 -27
- package/dist/js/schema/materials_category_components/entities/reusable/two_dimensional/slab_stack_configuration.json +348 -81
- package/dist/js/schema/materials_category_components/operations/core/modifications/perturb.json +117 -27
- package/dist/js/schema/method/categorized_method.json +4 -0
- package/dist/js/schema/method/unit_method.json +3 -0
- package/dist/js/schema/method.json +7 -1
- package/dist/js/schema/methods_directory/legacy/localorbital.json +7 -1
- package/dist/js/schema/methods_directory/legacy/pseudopotential.json +7 -1
- package/dist/js/schema/methods_directory/legacy/regression.json +4 -0
- package/dist/js/schema/methods_directory/legacy/unknown.json +7 -1
- package/dist/js/schema/methods_directory/mathematical/cg.json +2 -1
- package/dist/js/schema/methods_directory/mathematical/davidson.json +2 -1
- package/dist/js/schema/methods_directory/mathematical/regression.json +3 -2
- package/dist/js/schema/methods_directory/physical/ao/dunning.json +2 -1
- package/dist/js/schema/methods_directory/physical/ao/other.json +2 -1
- package/dist/js/schema/methods_directory/physical/ao/pople.json +2 -1
- package/dist/js/schema/methods_directory/physical/psp.json +2 -1
- package/dist/js/schema/methods_directory/physical/pw.json +2 -1
- package/dist/js/schema/methods_directory/physical/smearing.json +2 -1
- package/dist/js/schema/methods_directory/physical/tetrahedron.json +2 -1
- package/dist/js/schema/model/categorized_model.json +5 -0
- package/dist/js/schema/model/model_without_method.json +1 -0
- package/dist/js/schema/model.json +7 -2
- package/dist/js/schema/models_directory/double_hybrid.json +1 -0
- package/dist/js/schema/models_directory/gga.json +1 -0
- package/dist/js/schema/models_directory/gw.json +1 -0
- package/dist/js/schema/models_directory/hybrid.json +1 -0
- package/dist/js/schema/models_directory/lda.json +1 -0
- package/dist/js/schema/models_directory/legacy/any.json +488 -0
- package/dist/js/schema/models_directory/legacy/dft.json +267 -39
- package/dist/js/schema/models_directory/legacy/ml.json +10 -9
- package/dist/js/schema/models_directory/legacy/unknown.json +10 -9
- package/dist/js/schema/models_directory/mgga.json +1 -0
- package/dist/js/schema/models_directory/re.json +1 -0
- package/dist/js/schema/project.json +3 -0
- package/dist/js/schema/properties_directory/non_scalar/workflow.json +3682 -4421
- package/dist/js/schema/property/holder.json +3717 -4456
- package/dist/js/schema/software/application.json +53 -24
- package/dist/js/schema/software/application_properties.json +68 -0
- package/dist/js/schema/software/application_with_build_config.json +52 -23
- package/dist/js/schema/software/executable.json +67 -108
- package/dist/js/schema/software/executable_properties.json +24 -0
- package/dist/js/schema/software/flavor.json +90 -128
- package/dist/js/schema/software/flavor_properties.json +50 -0
- package/dist/js/schema/software/template.json +30 -35
- package/dist/js/schema/software/template_properties.json +44 -0
- package/dist/js/schema/software_directory/modeling/deepmd.json +48 -19
- package/dist/js/schema/software_directory/modeling/lammps.json +47 -18
- package/dist/js/schema/software_directory/modeling/nwchem.json +48 -19
- package/dist/js/schema/software_directory/modeling/unit/execution.json +2019 -455
- package/dist/js/schema/software_directory/modeling/vasp.json +48 -19
- package/dist/js/schema/software_directory/scripting/jupyter_lab.json +48 -19
- package/dist/js/schema/software_directory/scripting/python.json +48 -19
- package/dist/js/schema/software_directory/scripting/shell.json +48 -19
- package/dist/js/schema/software_directory/scripting/unit/execution.json +2019 -455
- package/dist/js/schema/system/bankable.json +4 -0
- package/dist/js/schema/system/creator.json +2 -1
- package/dist/js/schema/system/creator_account.json +3 -0
- package/dist/js/schema/system/in_set.json +3 -0
- package/dist/js/schema/system/name.json +3 -0
- package/dist/js/schema/system/owner.json +2 -1
- package/dist/js/schema/system/path_entity.json +3 -0
- package/dist/js/schema/system/runtime_item.json +17 -0
- package/dist/js/schema/system/runtime_items.json +94 -0
- package/dist/js/schema/workflow/base.json +4591 -39
- package/dist/js/schema/workflow/base_flow.json +1 -1
- package/dist/js/schema/workflow/subworkflow/mixin.json +3919 -0
- package/dist/js/schema/workflow/subworkflow/unit.json +2365 -1560
- package/dist/js/schema/workflow/subworkflow.json +3137 -1852
- package/dist/js/schema/workflow/unit/assertion.json +96 -140
- package/dist/js/schema/workflow/unit/assignment.json +129 -173
- package/dist/js/schema/workflow/unit/base.json +90 -133
- package/dist/js/schema/workflow/unit/condition.json +132 -175
- package/dist/js/schema/workflow/unit/context/_base.json +20 -0
- package/dist/js/schema/workflow/unit/context/_extra_data_material_hash.json +14 -0
- package/dist/js/schema/workflow/unit/context/item/boundaryConditions.json +63 -0
- package/dist/js/schema/workflow/unit/context/item/collinearMagnetization.json +82 -0
- package/dist/js/schema/workflow/unit/context/item/cutoffs.json +38 -0
- package/dist/js/schema/workflow/unit/context/item/dynamics.json +48 -0
- package/dist/js/schema/workflow/unit/context/item/grid.json +100 -0
- package/dist/js/schema/workflow/unit/context/item/hubbard_j.json +59 -0
- package/dist/js/schema/workflow/unit/context/item/hubbard_legacy.json +49 -0
- package/dist/js/schema/workflow/unit/context/item/hubbard_u.json +57 -0
- package/dist/js/schema/workflow/unit/context/item/hubbard_v.json +64 -0
- package/dist/js/schema/workflow/unit/context/item/input.json +712 -0
- package/dist/js/schema/workflow/unit/context/item/mlSettings.json +43 -0
- package/dist/js/schema/workflow/unit/context/item/mlTrainTestSplit.json +37 -0
- package/dist/js/schema/workflow/unit/context/item/neb.json +35 -0
- package/dist/js/schema/workflow/unit/context/item/nonCollinearMagnetization.json +150 -0
- package/dist/js/schema/workflow/unit/context/item/path.json +62 -0
- package/dist/js/schema/workflow/unit/context/item.json +1594 -0
- package/dist/js/schema/workflow/unit/execution.json +1928 -423
- package/dist/js/schema/workflow/unit/input/_input.json +74 -12
- package/dist/js/schema/workflow/unit/input/_inputItem.json +70 -10
- package/dist/js/schema/workflow/unit/input/_inputItemId.json +3 -1
- package/dist/js/schema/workflow/unit/io/api.json +5 -1
- package/dist/js/schema/workflow/unit/io/db_collection.json +24 -0
- package/dist/js/schema/workflow/unit/io/db_ids.json +22 -0
- package/dist/js/schema/workflow/unit/io/object_storage.json +5 -1
- package/dist/js/schema/workflow/unit/io.json +182 -253
- package/dist/js/schema/workflow/unit/map.json +134 -177
- package/dist/js/schema/workflow/unit/mixins/assertion.json +23 -0
- package/dist/js/schema/workflow/unit/mixins/assignment.json +57 -0
- package/dist/js/schema/workflow/unit/mixins/base.json +50 -0
- package/dist/js/schema/workflow/unit/mixins/condition.json +61 -0
- package/dist/js/schema/workflow/unit/mixins/execution.json +1998 -0
- package/dist/js/schema/workflow/unit/mixins/io.json +131 -0
- package/dist/js/schema/workflow/unit/mixins/map.json +60 -0
- package/dist/js/schema/workflow/unit/mixins/processing.json +27 -0
- package/dist/js/schema/workflow/unit/mixins/reduce.json +43 -0
- package/dist/js/schema/workflow/unit/mixins/subworkflow.json +11 -0
- package/dist/js/schema/workflow/unit/reduce.json +117 -160
- package/dist/js/schema/workflow/unit/subworkflow.json +91 -134
- package/dist/js/schema/workflow/unit.json +285 -2477
- package/dist/js/schema/workflow.json +3684 -4422
- package/dist/js/schemas.json +1 -1
- package/dist/js/scripts/compileTs.js +1 -1
- package/dist/js/scripts/setSchemaIds.js +2 -1
- package/dist/js/types.d.ts +27163 -15301
- package/dist/js/types.js +5 -5
- package/dist/js/utils/ajv.js +5 -4
- package/dist/js/utils/common.js +3 -2
- package/dist/js/utils/filesystem.js +3 -2
- package/example/material.json +7 -1
- package/example/model.json +2 -1
- package/example/software/application.json +1 -0
- package/example/software/executable.json +3 -4
- package/example/software/flavor.json +9 -2
- package/example/software/template.json +5 -8
- package/example/software_directory/modeling/espresso.json +2 -1
- package/example/software_directory/modeling/nwchem.json +4 -2
- package/example/software_directory/modeling/unit/execution.json +17 -2
- package/example/software_directory/modeling/vasp.json +2 -1
- package/example/software_directory/scripting/jupyter-lab.json +2 -1
- package/example/software_directory/scripting/python.json +2 -1
- package/example/software_directory/scripting/shell.json +2 -1
- package/example/software_directory/scripting/unit/execution.json +17 -2
- package/example/system/runtime_items.json +14 -0
- package/example/workflow/unit/assignment.json +5 -1
- package/example/workflow/unit/condition.json +5 -1
- package/example/workflow/unit/execution.json +7 -3
- package/example/workflow/unit/io/api.json +1 -0
- package/example/workflow/unit/io/db_collection.json +5 -0
- package/example/workflow/unit/io/db_ids.json +6 -0
- package/example/workflow/unit/io/object_storage.json +2 -1
- package/example/workflow/unit/io.json +9 -29
- package/example/workflow/unit/map.json +5 -1
- package/example/workflow/unit/reduce.json +5 -1
- package/example/workflow.json +6 -1
- package/package.json +2 -1
- package/schema/apse/file/applications/espresso/7.2/pw.x/atomic_species.json +6 -1
- package/schema/context_providers_directory/by_application/nwchem_total_energy_context_provider.json +7 -1
- package/schema/context_providers_directory/by_application/qe_neb_context_provider.json +12 -6
- package/schema/context_providers_directory/by_application/qe_pwx_context_provider.json +10 -1
- package/schema/context_providers_directory/by_application/vasp_context_provider.json +7 -1
- package/schema/context_providers_directory/by_application/vasp_neb_context_provider.json +7 -1
- package/schema/context_providers_directory/collinear_magnetization_context_provider.json +18 -4
- package/schema/context_providers_directory/non_collinear_magnetization_context_provider.json +7 -0
- package/schema/context_providers_directory/points_grid_data_provider.json +24 -7
- package/schema/context_providers_directory/points_path_data_provider.json +7 -3
- package/schema/context_providers_directory/points_path_data_provider_rendering.json +32 -0
- package/schema/job/base.json +4 -5
- package/schema/job/compute.json +1 -1
- package/schema/job/compute_property.json +15 -0
- package/schema/material/material_properties.json +65 -0
- package/schema/material/metadata/boundary_conditions.json +24 -0
- package/schema/material/metadata/bulk_properties.json +13 -0
- package/schema/material/metadata/slab_properties.json +41 -0
- package/schema/material/metadata.json +27 -0
- package/schema/material.json +5 -57
- package/schema/method.json +7 -1
- package/schema/model.json +0 -1
- package/schema/models_directory/legacy/any.json +20 -0
- package/schema/models_directory/legacy/dft.json +63 -12
- package/schema/models_directory/legacy/ml.json +10 -7
- package/schema/models_directory/legacy/unknown.json +10 -7
- package/schema/software/application.json +4 -35
- package/schema/software/application_properties.json +68 -0
- package/schema/software/executable.json +5 -23
- package/schema/software/executable_properties.json +24 -0
- package/schema/software/flavor.json +6 -28
- package/schema/software/flavor_properties.json +33 -0
- package/schema/software/template.json +2 -26
- package/schema/software/template_properties.json +44 -0
- package/schema/system/bankable.json +5 -1
- package/schema/system/creator.json +4 -1
- package/schema/system/creator_account.json +4 -1
- package/schema/system/in_set.json +4 -1
- package/schema/system/name.json +4 -1
- package/schema/system/owner.json +4 -1
- package/schema/system/runtime_item.json +17 -0
- package/schema/system/runtime_items.json +42 -0
- package/schema/workflow/base.json +17 -17
- package/schema/workflow/subworkflow/mixin.json +48 -0
- package/schema/workflow/subworkflow/unit.json +0 -6
- package/schema/workflow/subworkflow.json +4 -31
- package/schema/workflow/unit/assertion.json +2 -16
- package/schema/workflow/unit/assignment.json +2 -34
- package/schema/workflow/unit/base.json +6 -51
- package/schema/workflow/unit/condition.json +2 -38
- package/schema/workflow/unit/context/_base.json +20 -0
- package/schema/workflow/unit/context/_extra_data_material_hash.json +14 -0
- package/schema/workflow/unit/context/item/boundaryConditions.json +27 -0
- package/schema/workflow/unit/context/item/collinearMagnetization.json +27 -0
- package/schema/workflow/unit/context/item/cutoffs.json +20 -0
- package/schema/workflow/unit/context/item/dynamics.json +20 -0
- package/schema/workflow/unit/context/item/grid.json +31 -0
- package/schema/workflow/unit/context/item/hubbard_j.json +20 -0
- package/schema/workflow/unit/context/item/hubbard_legacy.json +20 -0
- package/schema/workflow/unit/context/item/hubbard_u.json +27 -0
- package/schema/workflow/unit/context/item/hubbard_v.json +20 -0
- package/schema/workflow/unit/context/item/input.json +47 -0
- package/schema/workflow/unit/context/item/mlSettings.json +20 -0
- package/schema/workflow/unit/context/item/mlTrainTestSplit.json +20 -0
- package/schema/workflow/unit/context/item/neb.json +20 -0
- package/schema/workflow/unit/context/item/nonCollinearMagnetization.json +27 -0
- package/schema/workflow/unit/context/item/path.json +33 -0
- package/schema/workflow/unit/context/item.json +55 -0
- package/schema/workflow/unit/execution.json +4 -25
- package/schema/workflow/unit/input/_input.json +1 -1
- package/schema/workflow/unit/input/_inputItem.json +9 -9
- package/schema/workflow/unit/input/_inputItemId.json +3 -1
- package/schema/workflow/unit/io/api.json +6 -2
- package/schema/workflow/unit/io/db_collection.json +24 -0
- package/schema/workflow/unit/io/db_ids.json +22 -0
- package/schema/workflow/unit/io/object_storage.json +6 -2
- package/schema/workflow/unit/io.json +2 -39
- package/schema/workflow/unit/map.json +2 -53
- package/schema/workflow/unit/mixins/assertion.json +23 -0
- package/schema/workflow/unit/mixins/assignment.json +42 -0
- package/schema/workflow/unit/mixins/base.json +50 -0
- package/schema/workflow/unit/mixins/condition.json +46 -0
- package/schema/workflow/unit/mixins/execution.json +49 -0
- package/schema/workflow/unit/mixins/io.json +46 -0
- package/schema/workflow/unit/mixins/map.json +61 -0
- package/schema/workflow/unit/{processing.json → mixins/processing.json} +3 -7
- package/schema/workflow/unit/mixins/reduce.json +44 -0
- package/schema/workflow/unit/mixins/subworkflow.json +12 -0
- package/schema/workflow/unit/reduce.json +2 -36
- package/schema/workflow/unit/subworkflow.json +4 -6
- package/schema/workflow/unit.json +1 -19
- package/schema/workflow.json +19 -15
- package/src/html/index.html +2 -1
- package/src/js/esse/JSONSchemasGenerator.ts +2 -1
- package/src/js/esse/JSONSchemasInterface.ts +1 -1
- package/src/js/esse/schemaUtils.ts +1 -1
- package/src/js/esse/server/utils.ts +82 -0
- package/src/js/esse/utils.ts +0 -74
- package/src/js/scripts/compileTs.ts +1 -1
- package/src/js/scripts/setSchemaIds.ts +1 -0
- package/src/js/utils/ajv.ts +1 -1
- package/dist/js/example/workflow/unit/io/db.json +0 -15
- package/dist/js/example/workflow/unit/processing.json +0 -13
- package/dist/js/schema/workflow/unit/io/db.json +0 -40
- package/dist/js/schema/workflow/unit/processing.json +0 -242
- package/example/workflow/unit/io/db.json +0 -15
- package/example/workflow/unit/processing.json +0 -13
- package/schema/workflow/unit/io/db.json +0 -40
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"name": "espresso",
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"shortName": "qe",
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"summary": "Quantum Espresso",
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"build": "GNU",
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"type": "dft"
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"type": "dft",
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"functional": "pbe"
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"name": "espresso",
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"shortName": "qe",
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"summary": "Quantum Espresso",
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"build": "GNU",
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"compute": null,
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"name": "pw.x",
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"applicationName": "pw.x",
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"isDefault": true,
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"flavor": {
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"name": "pw_scf",
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"executableName": "pw.x",
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"applicationName": "pw.x",
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"applicationVersion": "7.0",
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{
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"name": "in.scf",
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"templateId": "dJ7HYz5pQ4AuN5qc9"
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"monitors": [],
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"results": []
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"flowchartId": "execution",
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"applicationName": "pw.x",
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"applicationVersion": "7.0",
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"content": "K_POINTS automatic\n{{nkx}} {{nky}} {{nkz}} 0 0 0",
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"contextProviders": [
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{
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"rendered": "K_POINTS automatic\n2 2 2 0 0 0",
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"status": "idle",
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"type": "execution"
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"type": "execution",
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"context": []
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"workflows": [],
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"_id": "LCthJ6E2QabYCZqf4",
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"flowchartId": "05c362dc27ff1bb98d16fd60",
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"type": "subworkflow",
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"name": "subworkflow unit"
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"name": "subworkflow unit",
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"preProcessors": [],
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"postProcessors": [],
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"monitors": [],
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"results": []
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"ATOMIC_POSITIONS_WITHOUT_CONSTRAINTS",
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"ATOMIC_SPECIES",
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"FUNCTIONAL",
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"CARTESIAN"
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"contextProviderName"
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"properties": {
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"contextProviderName": {
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"type": "string",
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"const": "nwchem-total-energy",
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"description": "Descriminator for AJV validator"
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},
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"CHARGE": {
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"type": "integer",
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"description": "Total charge of the system."
|
package/dist/js/schema/context_providers_directory/by_application/qe_neb_context_provider.json
CHANGED
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@@ -15,7 +15,8 @@
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"CELL_PARAMETERS",
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"FIRST_IMAGE",
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"LAST_IMAGE",
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"INTERMEDIATE_IMAGES"
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"INTERMEDIATE_IMAGES",
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"contextProviderName"
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"properties": {
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"IBRAV": {
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"type": "array",
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"items": {
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"required": [
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"X",
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"Mass_X",
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"PseudoPot_X"
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],
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"additionalProperties": false,
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"properties": {
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"type": "array",
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"items": {
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"required": [
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"X",
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"Mass_X",
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"PseudoPot_X"
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],
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"additionalProperties": false,
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@@ -176,19 +187,166 @@
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"FIRST_IMAGE": {
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"
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"type": "array",
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],
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"additionalProperties": false,
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"properties": {
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"X": {
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"type": "string",
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"description": "label of the atom as specified in ATOMIC_SPECIES"
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},
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"x": {
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"type": "number",
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"description": "atomic positions"
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},
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"y": {
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"type": "number",
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"description": "atomic positions"
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},
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"z": {
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"type": "number",
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"description": "atomic positions"
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},
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"if_pos(1)": {
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"$schema": "http://json-schema.org/draft-07/schema#",
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"title": "integer one or zero",
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"type": "integer",
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},
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"if_pos(2)": {
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"$schema": "http://json-schema.org/draft-07/schema#",
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"title": "integer one or zero",
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},
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"if_pos(3)": {
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"$schema": "http://json-schema.org/draft-07/schema#",
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"title": "integer one or zero",
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"type": "integer",
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"minimum": 0,
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"maximum": 1
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}
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}
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}
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"LAST_IMAGE": {
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"
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"required": [
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"x",
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"y",
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"z"
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],
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"additionalProperties": false,
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"properties": {
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"X": {
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"type": "string",
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"description": "label of the atom as specified in ATOMIC_SPECIES"
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},
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"x": {
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"type": "number",
|
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"description": "atomic positions"
|
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},
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"y": {
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"type": "number",
|
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"description": "atomic positions"
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},
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"z": {
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"type": "number",
|
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"description": "atomic positions"
|
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},
|
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"if_pos(1)": {
|
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"$schema": "http://json-schema.org/draft-07/schema#",
|
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"title": "integer one or zero",
|
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"type": "integer",
|
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"minimum": 0,
|
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"maximum": 1
|
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},
|
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"if_pos(2)": {
|
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"$schema": "http://json-schema.org/draft-07/schema#",
|
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"title": "integer one or zero",
|
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|
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"type": "integer",
|
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|
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"minimum": 0,
|
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|
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"maximum": 1
|
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|
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},
|
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|
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"if_pos(3)": {
|
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|
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"$schema": "http://json-schema.org/draft-07/schema#",
|
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|
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"title": "integer one or zero",
|
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"type": "integer",
|
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"minimum": 0,
|
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|
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"maximum": 1
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}
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}
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|
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}
|
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|
},
|
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291
|
"INTERMEDIATE_IMAGES": {
|
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|
"type": "array",
|
|
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293
|
"description": "Atomic positions blocks (ATOMIC_POSITIONS) for all intermediate NEB images.",
|
|
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|
"items": {
|
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"type": "
|
|
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"type": "array",
|
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"items": {
|
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"type": "object",
|
|
298
|
+
"required": [
|
|
299
|
+
"x",
|
|
300
|
+
"y",
|
|
301
|
+
"z"
|
|
302
|
+
],
|
|
303
|
+
"additionalProperties": false,
|
|
304
|
+
"properties": {
|
|
305
|
+
"X": {
|
|
306
|
+
"type": "string",
|
|
307
|
+
"description": "label of the atom as specified in ATOMIC_SPECIES"
|
|
308
|
+
},
|
|
309
|
+
"x": {
|
|
310
|
+
"type": "number",
|
|
311
|
+
"description": "atomic positions"
|
|
312
|
+
},
|
|
313
|
+
"y": {
|
|
314
|
+
"type": "number",
|
|
315
|
+
"description": "atomic positions"
|
|
316
|
+
},
|
|
317
|
+
"z": {
|
|
318
|
+
"type": "number",
|
|
319
|
+
"description": "atomic positions"
|
|
320
|
+
},
|
|
321
|
+
"if_pos(1)": {
|
|
322
|
+
"$schema": "http://json-schema.org/draft-07/schema#",
|
|
323
|
+
"title": "integer one or zero",
|
|
324
|
+
"type": "integer",
|
|
325
|
+
"minimum": 0,
|
|
326
|
+
"maximum": 1
|
|
327
|
+
},
|
|
328
|
+
"if_pos(2)": {
|
|
329
|
+
"$schema": "http://json-schema.org/draft-07/schema#",
|
|
330
|
+
"title": "integer one or zero",
|
|
331
|
+
"type": "integer",
|
|
332
|
+
"minimum": 0,
|
|
333
|
+
"maximum": 1
|
|
334
|
+
},
|
|
335
|
+
"if_pos(3)": {
|
|
336
|
+
"$schema": "http://json-schema.org/draft-07/schema#",
|
|
337
|
+
"title": "integer one or zero",
|
|
338
|
+
"type": "integer",
|
|
339
|
+
"minimum": 0,
|
|
340
|
+
"maximum": 1
|
|
341
|
+
}
|
|
342
|
+
}
|
|
343
|
+
}
|
|
191
344
|
}
|
|
345
|
+
},
|
|
346
|
+
"contextProviderName": {
|
|
347
|
+
"type": "string",
|
|
348
|
+
"const": "qe-neb",
|
|
349
|
+
"description": "Descriminator for AJV validator"
|
|
192
350
|
}
|
|
193
351
|
}
|
|
194
352
|
}
|
package/dist/js/schema/context_providers_directory/by_application/qe_pwx_base_context_provider.json
CHANGED
|
@@ -20,6 +20,11 @@
|
|
|
20
20
|
"type": "array",
|
|
21
21
|
"items": {
|
|
22
22
|
"type": "object",
|
|
23
|
+
"required": [
|
|
24
|
+
"X",
|
|
25
|
+
"Mass_X",
|
|
26
|
+
"PseudoPot_X"
|
|
27
|
+
],
|
|
23
28
|
"additionalProperties": false,
|
|
24
29
|
"properties": {
|
|
25
30
|
"X": {
|
|
@@ -41,6 +46,11 @@
|
|
|
41
46
|
"type": "array",
|
|
42
47
|
"items": {
|
|
43
48
|
"type": "object",
|
|
49
|
+
"required": [
|
|
50
|
+
"X",
|
|
51
|
+
"Mass_X",
|
|
52
|
+
"PseudoPot_X"
|
|
53
|
+
],
|
|
44
54
|
"additionalProperties": false,
|
|
45
55
|
"properties": {
|
|
46
56
|
"X": {
|
package/dist/js/schema/context_providers_directory/by_application/qe_pwx_context_provider.json
CHANGED
|
@@ -14,7 +14,8 @@
|
|
|
14
14
|
"NTYP_WITH_LABELS",
|
|
15
15
|
"ATOMIC_POSITIONS",
|
|
16
16
|
"ATOMIC_POSITIONS_WITHOUT_CONSTRAINTS",
|
|
17
|
-
"CELL_PARAMETERS"
|
|
17
|
+
"CELL_PARAMETERS",
|
|
18
|
+
"contextProviderName"
|
|
18
19
|
],
|
|
19
20
|
"properties": {
|
|
20
21
|
"IBRAV": {
|
|
@@ -32,6 +33,11 @@
|
|
|
32
33
|
"type": "array",
|
|
33
34
|
"items": {
|
|
34
35
|
"type": "object",
|
|
36
|
+
"required": [
|
|
37
|
+
"X",
|
|
38
|
+
"Mass_X",
|
|
39
|
+
"PseudoPot_X"
|
|
40
|
+
],
|
|
35
41
|
"additionalProperties": false,
|
|
36
42
|
"properties": {
|
|
37
43
|
"X": {
|
|
@@ -53,6 +59,11 @@
|
|
|
53
59
|
"type": "array",
|
|
54
60
|
"items": {
|
|
55
61
|
"type": "object",
|
|
62
|
+
"required": [
|
|
63
|
+
"X",
|
|
64
|
+
"Mass_X",
|
|
65
|
+
"PseudoPot_X"
|
|
66
|
+
],
|
|
56
67
|
"additionalProperties": false,
|
|
57
68
|
"properties": {
|
|
58
69
|
"X": {
|
|
@@ -173,6 +184,11 @@
|
|
|
173
184
|
}
|
|
174
185
|
}
|
|
175
186
|
}
|
|
187
|
+
},
|
|
188
|
+
"contextProviderName": {
|
|
189
|
+
"type": "string",
|
|
190
|
+
"const": "qe-pwx",
|
|
191
|
+
"description": "Descriminator for AJV validator"
|
|
176
192
|
}
|
|
177
193
|
}
|
|
178
194
|
}
|
package/dist/js/schema/context_providers_directory/by_application/vasp_context_provider.json
CHANGED
|
@@ -6,7 +6,8 @@
|
|
|
6
6
|
"type": "object",
|
|
7
7
|
"required": [
|
|
8
8
|
"POSCAR",
|
|
9
|
-
"POSCAR_WITH_CONSTRAINTS"
|
|
9
|
+
"POSCAR_WITH_CONSTRAINTS",
|
|
10
|
+
"contextProviderName"
|
|
10
11
|
],
|
|
11
12
|
"properties": {
|
|
12
13
|
"POSCAR": {
|
|
@@ -16,6 +17,11 @@
|
|
|
16
17
|
"POSCAR_WITH_CONSTRAINTS": {
|
|
17
18
|
"type": "string",
|
|
18
19
|
"description": "POSCAR content for VASP including lattice, atom types, positions and constraints. May differ in how constraints are represented."
|
|
20
|
+
},
|
|
21
|
+
"contextProviderName": {
|
|
22
|
+
"type": "string",
|
|
23
|
+
"const": "vasp",
|
|
24
|
+
"description": "Descriminator for AJV validator"
|
|
19
25
|
}
|
|
20
26
|
}
|
|
21
27
|
}
|
package/dist/js/schema/context_providers_directory/by_application/vasp_neb_context_provider.json
CHANGED
|
@@ -7,7 +7,8 @@
|
|
|
7
7
|
"required": [
|
|
8
8
|
"FIRST_IMAGE",
|
|
9
9
|
"LAST_IMAGE",
|
|
10
|
-
"INTERMEDIATE_IMAGES"
|
|
10
|
+
"INTERMEDIATE_IMAGES",
|
|
11
|
+
"contextProviderName"
|
|
11
12
|
],
|
|
12
13
|
"properties": {
|
|
13
14
|
"FIRST_IMAGE": {
|
|
@@ -24,6 +25,11 @@
|
|
|
24
25
|
"items": {
|
|
25
26
|
"type": "string"
|
|
26
27
|
}
|
|
28
|
+
},
|
|
29
|
+
"contextProviderName": {
|
|
30
|
+
"type": "string",
|
|
31
|
+
"const": "vasp-neb",
|
|
32
|
+
"description": "Descriminator for AJV validator"
|
|
27
33
|
}
|
|
28
34
|
}
|
|
29
35
|
}
|
package/dist/js/schema/context_providers_directory/collinear_magnetization_context_provider.json
CHANGED
|
@@ -4,11 +4,21 @@
|
|
|
4
4
|
"title": "Collinear Magnetization Context Provider Schema",
|
|
5
5
|
"description": "Set starting magnetization, can have values in the range [-1, +1].",
|
|
6
6
|
"type": "object",
|
|
7
|
+
"required": [
|
|
8
|
+
"startingMagnetization",
|
|
9
|
+
"isTotalMagnetization",
|
|
10
|
+
"totalMagnetization"
|
|
11
|
+
],
|
|
7
12
|
"properties": {
|
|
8
13
|
"startingMagnetization": {
|
|
9
14
|
"type": "array",
|
|
10
15
|
"items": {
|
|
11
16
|
"type": "object",
|
|
17
|
+
"required": [
|
|
18
|
+
"atomicSpecies",
|
|
19
|
+
"value",
|
|
20
|
+
"index"
|
|
21
|
+
],
|
|
12
22
|
"properties": {
|
|
13
23
|
"atomicSpecies": {
|
|
14
24
|
"type": "string",
|
|
@@ -19,6 +29,10 @@
|
|
|
19
29
|
"title": "Starting magnetization",
|
|
20
30
|
"minimum": -1,
|
|
21
31
|
"maximum": 1
|
|
32
|
+
},
|
|
33
|
+
"index": {
|
|
34
|
+
"type": "integer",
|
|
35
|
+
"title": "Index"
|
|
22
36
|
}
|
|
23
37
|
}
|
|
24
38
|
}
|
package/dist/js/schema/context_providers_directory/non_collinear_magnetization_context_provider.json
CHANGED
|
@@ -37,6 +37,13 @@
|
|
|
37
37
|
"type": "boolean",
|
|
38
38
|
"title": "Set arbitrary spin angle"
|
|
39
39
|
},
|
|
40
|
+
"isArbitrarySpinDirection": {
|
|
41
|
+
"type": "boolean",
|
|
42
|
+
"title": "Set arbitrary spin direction"
|
|
43
|
+
},
|
|
44
|
+
"lforcet": {
|
|
45
|
+
"type": "boolean"
|
|
46
|
+
},
|
|
40
47
|
"spinAngles": {
|
|
41
48
|
"type": "array",
|
|
42
49
|
"items": {
|
|
@@ -4,14 +4,31 @@
|
|
|
4
4
|
"title": "Points Grid Data Provider Schema",
|
|
5
5
|
"description": "3D grid with shifts for k-point or q-point sampling.",
|
|
6
6
|
"type": "object",
|
|
7
|
+
"required": [
|
|
8
|
+
"dimensions",
|
|
9
|
+
"gridMetricType",
|
|
10
|
+
"gridMetricValue"
|
|
11
|
+
],
|
|
7
12
|
"properties": {
|
|
8
13
|
"dimensions": {
|
|
9
|
-
"
|
|
10
|
-
|
|
11
|
-
|
|
12
|
-
|
|
13
|
-
|
|
14
|
-
|
|
14
|
+
"anyOf": [
|
|
15
|
+
{
|
|
16
|
+
"type": "array",
|
|
17
|
+
"items": {
|
|
18
|
+
"type": "number"
|
|
19
|
+
},
|
|
20
|
+
"minItems": 3,
|
|
21
|
+
"maxItems": 3
|
|
22
|
+
},
|
|
23
|
+
{
|
|
24
|
+
"type": "array",
|
|
25
|
+
"items": {
|
|
26
|
+
"type": "string"
|
|
27
|
+
},
|
|
28
|
+
"minItems": 3,
|
|
29
|
+
"maxItems": 3
|
|
30
|
+
}
|
|
31
|
+
]
|
|
15
32
|
},
|
|
16
33
|
"shifts": {
|
|
17
34
|
"type": "array",
|
|
@@ -2,17 +2,21 @@
|
|
|
2
2
|
"$id": "context-providers-directory/points-path-data-provider",
|
|
3
3
|
"$schema": "http://json-schema.org/draft-07/schema#",
|
|
4
4
|
"title": "Points Path Data Provider Schema",
|
|
5
|
-
"description": "Path in reciprocal space for band structure calculations.",
|
|
5
|
+
"description": "Path in reciprocal space for band structure calculations. User-editable and persisted fields only (coordinates are derived at render time).",
|
|
6
6
|
"type": "array",
|
|
7
7
|
"minItems": 1,
|
|
8
8
|
"items": {
|
|
9
9
|
"type": "object",
|
|
10
|
+
"required": [
|
|
11
|
+
"point",
|
|
12
|
+
"steps"
|
|
13
|
+
],
|
|
10
14
|
"properties": {
|
|
11
15
|
"point": {
|
|
12
16
|
"type": "string"
|
|
13
17
|
},
|
|
14
18
|
"steps": {
|
|
15
|
-
"type": "
|
|
19
|
+
"type": "number"
|
|
16
20
|
}
|
|
17
21
|
}
|
|
18
22
|
}
|
|
@@ -0,0 +1,32 @@
|
|
|
1
|
+
{
|
|
2
|
+
"$id": "context-providers-directory/points-path-data-provider-rendering",
|
|
3
|
+
"$schema": "http://json-schema.org/draft-07/schema#",
|
|
4
|
+
"title": "Points Path Data Provider Rendering Schema",
|
|
5
|
+
"description": "Path in reciprocal space including derived Cartesian/fractional coordinates for template rendering. Not persisted on the context item.",
|
|
6
|
+
"type": "array",
|
|
7
|
+
"minItems": 1,
|
|
8
|
+
"items": {
|
|
9
|
+
"type": "object",
|
|
10
|
+
"required": [
|
|
11
|
+
"point",
|
|
12
|
+
"steps",
|
|
13
|
+
"coordinates"
|
|
14
|
+
],
|
|
15
|
+
"properties": {
|
|
16
|
+
"point": {
|
|
17
|
+
"type": "string"
|
|
18
|
+
},
|
|
19
|
+
"steps": {
|
|
20
|
+
"type": "number"
|
|
21
|
+
},
|
|
22
|
+
"coordinates": {
|
|
23
|
+
"type": "array",
|
|
24
|
+
"items": {
|
|
25
|
+
"type": "number",
|
|
26
|
+
"minItems": 3,
|
|
27
|
+
"maxItems": 3
|
|
28
|
+
}
|
|
29
|
+
}
|
|
30
|
+
}
|
|
31
|
+
}
|
|
32
|
+
}
|