@jokerized/getresearchdone 0.4.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (711) hide show
  1. package/.claude-plugin/plugin.json +103 -0
  2. package/README.md +211 -0
  3. package/agents/grd-baseline-assessor.md +684 -0
  4. package/agents/grd-code-reviewer.md +300 -0
  5. package/agents/grd-codebase-mapper.md +355 -0
  6. package/agents/grd-critique-agent.md +119 -0
  7. package/agents/grd-debugger.md +519 -0
  8. package/agents/grd-deep-diver.md +737 -0
  9. package/agents/grd-eval-planner.md +913 -0
  10. package/agents/grd-eval-reporter.md +717 -0
  11. package/agents/grd-executor.md +683 -0
  12. package/agents/grd-feasibility-analyst.md +624 -0
  13. package/agents/grd-integration-checker.md +367 -0
  14. package/agents/grd-knowledge-miner.md +81 -0
  15. package/agents/grd-migrator.md +88 -0
  16. package/agents/grd-phase-researcher.md +697 -0
  17. package/agents/grd-plan-checker.md +443 -0
  18. package/agents/grd-planner.md +1532 -0
  19. package/agents/grd-product-owner.md +562 -0
  20. package/agents/grd-project-researcher.md +513 -0
  21. package/agents/grd-research-synthesizer.md +273 -0
  22. package/agents/grd-roadmapper.md +798 -0
  23. package/agents/grd-surveyor.md +566 -0
  24. package/agents/grd-verifier.md +893 -0
  25. package/bin/gd.js +4 -0
  26. package/bin/gd.ts +227 -0
  27. package/bin/grd-manifest.js +4 -0
  28. package/bin/grd-manifest.ts +286 -0
  29. package/bin/grd-mcp-server.js +4 -0
  30. package/bin/grd-mcp-server.ts +124 -0
  31. package/bin/grd-tools.js +4 -0
  32. package/bin/grd-tools.ts +2471 -0
  33. package/bin/postinstall.js +4 -0
  34. package/bin/postinstall.ts +80 -0
  35. package/commands/add-phase.md +123 -0
  36. package/commands/add-todo.md +87 -0
  37. package/commands/assess-baseline.md +289 -0
  38. package/commands/autopilot.md +100 -0
  39. package/commands/autoplan.md +55 -0
  40. package/commands/check-todos.md +87 -0
  41. package/commands/compare-methods.md +262 -0
  42. package/commands/complete-milestone.md +225 -0
  43. package/commands/debug.md +372 -0
  44. package/commands/deep-dive.md +288 -0
  45. package/commands/discover.md +281 -0
  46. package/commands/discuss-phase.md +188 -0
  47. package/commands/discuss.md +55 -0
  48. package/commands/eval-report.md +310 -0
  49. package/commands/evolve.md +79 -0
  50. package/commands/execute-phase.md +1017 -0
  51. package/commands/feasibility.md +292 -0
  52. package/commands/help.md +407 -0
  53. package/commands/init.md +1508 -0
  54. package/commands/insert-phase.md +113 -0
  55. package/commands/iterate.md +327 -0
  56. package/commands/list-phase-assumptions.md +217 -0
  57. package/commands/long-term-roadmap.md +202 -0
  58. package/commands/map-codebase.md +111 -0
  59. package/commands/migrate.md +159 -0
  60. package/commands/new-milestone.md +169 -0
  61. package/commands/pause-work.md +83 -0
  62. package/commands/plan-milestone-gaps.md +373 -0
  63. package/commands/plan-phase.md +655 -0
  64. package/commands/principles.md +328 -0
  65. package/commands/product-plan.md +319 -0
  66. package/commands/progress.md +481 -0
  67. package/commands/quick.md +167 -0
  68. package/commands/reapply-patches.md +154 -0
  69. package/commands/remove-phase.md +97 -0
  70. package/commands/requirement.md +96 -0
  71. package/commands/resume-project.md +113 -0
  72. package/commands/settings.md +1144 -0
  73. package/commands/survey.md +242 -0
  74. package/commands/sync.md +246 -0
  75. package/commands/tracker-setup.md +322 -0
  76. package/commands/update.md +202 -0
  77. package/commands/verify-phase.md +335 -0
  78. package/commands/verify-work.md +701 -0
  79. package/commands/wireup.md +29 -0
  80. package/dist/bin/gd.d.ts +3 -0
  81. package/dist/bin/gd.d.ts.map +1 -0
  82. package/dist/bin/gd.js +178 -0
  83. package/dist/bin/gd.js.map +1 -0
  84. package/dist/bin/grd-manifest.d.ts +3 -0
  85. package/dist/bin/grd-manifest.d.ts.map +1 -0
  86. package/dist/bin/grd-manifest.js +202 -0
  87. package/dist/bin/grd-manifest.js.map +1 -0
  88. package/dist/bin/grd-mcp-server.d.ts +3 -0
  89. package/dist/bin/grd-mcp-server.d.ts.map +1 -0
  90. package/dist/bin/grd-mcp-server.js +71 -0
  91. package/dist/bin/grd-mcp-server.js.map +1 -0
  92. package/dist/bin/grd-tools.d.ts +3 -0
  93. package/dist/bin/grd-tools.d.ts.map +1 -0
  94. package/dist/bin/grd-tools.js +1680 -0
  95. package/dist/bin/grd-tools.js.map +1 -0
  96. package/dist/bin/postinstall.d.ts +3 -0
  97. package/dist/bin/postinstall.d.ts.map +1 -0
  98. package/dist/bin/postinstall.js +61 -0
  99. package/dist/bin/postinstall.js.map +1 -0
  100. package/dist/lib/autopilot-milestone.d.ts +2 -0
  101. package/dist/lib/autopilot-milestone.d.ts.map +1 -0
  102. package/dist/lib/autopilot-milestone.js +94 -0
  103. package/dist/lib/autopilot-milestone.js.map +1 -0
  104. package/dist/lib/autopilot-pipeline.d.ts +2 -0
  105. package/dist/lib/autopilot-pipeline.d.ts.map +1 -0
  106. package/dist/lib/autopilot-pipeline.js +830 -0
  107. package/dist/lib/autopilot-pipeline.js.map +1 -0
  108. package/dist/lib/autopilot-waves.d.ts +2 -0
  109. package/dist/lib/autopilot-waves.d.ts.map +1 -0
  110. package/dist/lib/autopilot-waves.js +266 -0
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  112. package/dist/lib/autopilot.d.ts +2 -0
  113. package/dist/lib/autopilot.d.ts.map +1 -0
  114. package/dist/lib/autopilot.js +1314 -0
  115. package/dist/lib/autopilot.js.map +1 -0
  116. package/dist/lib/autoplan.d.ts +2 -0
  117. package/dist/lib/autoplan.d.ts.map +1 -0
  118. package/dist/lib/autoplan.js +198 -0
  119. package/dist/lib/autoplan.js.map +1 -0
  120. package/dist/lib/autoresearch.d.ts +2 -0
  121. package/dist/lib/autoresearch.d.ts.map +1 -0
  122. package/dist/lib/autoresearch.js +626 -0
  123. package/dist/lib/autoresearch.js.map +1 -0
  124. package/dist/lib/backend.d.ts +2 -0
  125. package/dist/lib/backend.d.ts.map +1 -0
  126. package/dist/lib/backend.js +1036 -0
  127. package/dist/lib/backend.js.map +1 -0
  128. package/dist/lib/benchmark.d.ts +99 -0
  129. package/dist/lib/benchmark.d.ts.map +1 -0
  130. package/dist/lib/benchmark.js +278 -0
  131. package/dist/lib/benchmark.js.map +1 -0
  132. package/dist/lib/citations.d.ts +2 -0
  133. package/dist/lib/citations.d.ts.map +1 -0
  134. package/dist/lib/citations.js +642 -0
  135. package/dist/lib/citations.js.map +1 -0
  136. package/dist/lib/cleanup.d.ts +2 -0
  137. package/dist/lib/cleanup.d.ts.map +1 -0
  138. package/dist/lib/cleanup.js +1222 -0
  139. package/dist/lib/cleanup.js.map +1 -0
  140. package/dist/lib/cli/adapters.d.ts +10 -0
  141. package/dist/lib/cli/adapters.d.ts.map +1 -0
  142. package/dist/lib/cli/adapters.js +27 -0
  143. package/dist/lib/cli/adapters.js.map +1 -0
  144. package/dist/lib/cli/agent.d.ts +17 -0
  145. package/dist/lib/cli/agent.d.ts.map +1 -0
  146. package/dist/lib/cli/agent.js +53 -0
  147. package/dist/lib/cli/agent.js.map +1 -0
  148. package/dist/lib/cli/index.d.ts +21 -0
  149. package/dist/lib/cli/index.d.ts.map +1 -0
  150. package/dist/lib/cli/index.js +264 -0
  151. package/dist/lib/cli/index.js.map +1 -0
  152. package/dist/lib/cli/output.d.ts +20 -0
  153. package/dist/lib/cli/output.d.ts.map +1 -0
  154. package/dist/lib/cli/output.js +22 -0
  155. package/dist/lib/cli/output.js.map +1 -0
  156. package/dist/lib/cli/scan-dispatch.d.ts +9 -0
  157. package/dist/lib/cli/scan-dispatch.d.ts.map +1 -0
  158. package/dist/lib/cli/scan-dispatch.js +107 -0
  159. package/dist/lib/cli/scan-dispatch.js.map +1 -0
  160. package/dist/lib/cli/tools.d.ts +16 -0
  161. package/dist/lib/cli/tools.d.ts.map +1 -0
  162. package/dist/lib/cli/tools.js +168 -0
  163. package/dist/lib/cli/tools.js.map +1 -0
  164. package/dist/lib/commands/_dashboard-parsers.d.ts +2 -0
  165. package/dist/lib/commands/_dashboard-parsers.d.ts.map +1 -0
  166. package/dist/lib/commands/_dashboard-parsers.js +192 -0
  167. package/dist/lib/commands/_dashboard-parsers.js.map +1 -0
  168. package/dist/lib/commands/analysis.d.ts +2 -0
  169. package/dist/lib/commands/analysis.d.ts.map +1 -0
  170. package/dist/lib/commands/analysis.js +1418 -0
  171. package/dist/lib/commands/analysis.js.map +1 -0
  172. package/dist/lib/commands/assumptions.d.ts +2 -0
  173. package/dist/lib/commands/assumptions.d.ts.map +1 -0
  174. package/dist/lib/commands/assumptions.js +166 -0
  175. package/dist/lib/commands/assumptions.js.map +1 -0
  176. package/dist/lib/commands/blame.d.ts +2 -0
  177. package/dist/lib/commands/blame.d.ts.map +1 -0
  178. package/dist/lib/commands/blame.js +133 -0
  179. package/dist/lib/commands/blame.js.map +1 -0
  180. package/dist/lib/commands/budget.d.ts +2 -0
  181. package/dist/lib/commands/budget.d.ts.map +1 -0
  182. package/dist/lib/commands/budget.js +100 -0
  183. package/dist/lib/commands/budget.js.map +1 -0
  184. package/dist/lib/commands/check-plans.d.ts +2 -0
  185. package/dist/lib/commands/check-plans.d.ts.map +1 -0
  186. package/dist/lib/commands/check-plans.js +190 -0
  187. package/dist/lib/commands/check-plans.js.map +1 -0
  188. package/dist/lib/commands/config.d.ts +2 -0
  189. package/dist/lib/commands/config.d.ts.map +1 -0
  190. package/dist/lib/commands/config.js +188 -0
  191. package/dist/lib/commands/config.js.map +1 -0
  192. package/dist/lib/commands/dashboard.d.ts +2 -0
  193. package/dist/lib/commands/dashboard.d.ts.map +1 -0
  194. package/dist/lib/commands/dashboard.js +466 -0
  195. package/dist/lib/commands/dashboard.js.map +1 -0
  196. package/dist/lib/commands/estimate.d.ts +2 -0
  197. package/dist/lib/commands/estimate.d.ts.map +1 -0
  198. package/dist/lib/commands/estimate.js +148 -0
  199. package/dist/lib/commands/estimate.js.map +1 -0
  200. package/dist/lib/commands/eval-diff.d.ts +2 -0
  201. package/dist/lib/commands/eval-diff.d.ts.map +1 -0
  202. package/dist/lib/commands/eval-diff.js +213 -0
  203. package/dist/lib/commands/eval-diff.js.map +1 -0
  204. package/dist/lib/commands/freshness.d.ts +2 -0
  205. package/dist/lib/commands/freshness.d.ts.map +1 -0
  206. package/dist/lib/commands/freshness.js +163 -0
  207. package/dist/lib/commands/freshness.js.map +1 -0
  208. package/dist/lib/commands/health.d.ts +2 -0
  209. package/dist/lib/commands/health.d.ts.map +1 -0
  210. package/dist/lib/commands/health.js +435 -0
  211. package/dist/lib/commands/health.js.map +1 -0
  212. package/dist/lib/commands/index.d.ts +2 -0
  213. package/dist/lib/commands/index.d.ts.map +1 -0
  214. package/dist/lib/commands/index.js +128 -0
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  216. package/dist/lib/commands/install.d.ts +56 -0
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  218. package/dist/lib/commands/install.js +214 -0
  219. package/dist/lib/commands/install.js.map +1 -0
  220. package/dist/lib/commands/knowhow-aggregator.d.ts +2 -0
  221. package/dist/lib/commands/knowhow-aggregator.d.ts.map +1 -0
  222. package/dist/lib/commands/knowhow-aggregator.js +279 -0
  223. package/dist/lib/commands/knowhow-aggregator.js.map +1 -0
  224. package/dist/lib/commands/knowledge-search.d.ts +2 -0
  225. package/dist/lib/commands/knowledge-search.d.ts.map +1 -0
  226. package/dist/lib/commands/knowledge-search.js +113 -0
  227. package/dist/lib/commands/knowledge-search.js.map +1 -0
  228. package/dist/lib/commands/long-term-roadmap.d.ts +2 -0
  229. package/dist/lib/commands/long-term-roadmap.d.ts.map +1 -0
  230. package/dist/lib/commands/long-term-roadmap.js +272 -0
  231. package/dist/lib/commands/long-term-roadmap.js.map +1 -0
  232. package/dist/lib/commands/patterns.d.ts +91 -0
  233. package/dist/lib/commands/patterns.d.ts.map +1 -0
  234. package/dist/lib/commands/patterns.js +391 -0
  235. package/dist/lib/commands/patterns.js.map +1 -0
  236. package/dist/lib/commands/phase-info.d.ts +2 -0
  237. package/dist/lib/commands/phase-info.d.ts.map +1 -0
  238. package/dist/lib/commands/phase-info.js +509 -0
  239. package/dist/lib/commands/phase-info.js.map +1 -0
  240. package/dist/lib/commands/plan-lint.d.ts +56 -0
  241. package/dist/lib/commands/plan-lint.d.ts.map +1 -0
  242. package/dist/lib/commands/plan-lint.js +481 -0
  243. package/dist/lib/commands/plan-lint.js.map +1 -0
  244. package/dist/lib/commands/plan-phase.d.ts +53 -0
  245. package/dist/lib/commands/plan-phase.d.ts.map +1 -0
  246. package/dist/lib/commands/plan-phase.js +288 -0
  247. package/dist/lib/commands/plan-phase.js.map +1 -0
  248. package/dist/lib/commands/progress.d.ts +2 -0
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  252. package/dist/lib/commands/quality.d.ts +2 -0
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  256. package/dist/lib/commands/rollback.d.ts +2 -0
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  260. package/dist/lib/commands/scan.d.ts +25 -0
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  264. package/dist/lib/commands/search.d.ts +2 -0
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  268. package/dist/lib/commands/select-candidate.d.ts +128 -0
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  272. package/dist/lib/commands/singularity.d.ts +2 -0
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@@ -0,0 +1,361 @@
1
+ 'use strict';
2
+
3
+ /**
4
+ * GRD Autopilot/Waves -- Wave-splitting algorithm, write-intent file analysis,
5
+ * and merge queue helpers. Extracted from lib/autopilot.ts as part of the
6
+ * post-gsd-2 decomposition.
7
+ *
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+ * No dependencies on other autopilot modules — these helpers are pure-ish
9
+ * (file I/O for atomic writes, but no orchestration logic).
10
+ */
11
+
12
+ import type {
13
+ DependencyGraph,
14
+ PlanArtifact,
15
+ ArtifactDAG,
16
+ ArtifactDAGValidation,
17
+ } from './types';
18
+
19
+ const {
20
+ buildDependencyGraph,
21
+ computeParallelGroups,
22
+ buildArtifactDAG,
23
+ validateArtifactDAG,
24
+ }: {
25
+ buildDependencyGraph: (
26
+ phases: Array<{ number: string; name: string; depends_on?: string | null }>
27
+ ) => DependencyGraph;
28
+ computeParallelGroups: (graph: DependencyGraph) => string[][];
29
+ buildArtifactDAG: (plans: PlanArtifact[]) => ArtifactDAG;
30
+ validateArtifactDAG: (dag: ArtifactDAG, plans: PlanArtifact[]) => ArtifactDAGValidation;
31
+ } = require('./deps');
32
+
33
+ const fs = require('fs');
34
+
35
+ // ─── Atomic File I/O ─────────────────────────────────────────────────────────
36
+
37
+ /**
38
+ * Write a file atomically using write-to-temp-then-rename.
39
+ * Prevents partial reads under concurrent access (POSIX rename is atomic).
40
+ */
41
+ function atomicWriteFileSync(filePath: string, data: string): void {
42
+ const tmpPath: string = `${filePath}.tmp`;
43
+ fs.writeFileSync(tmpPath, data);
44
+ fs.renameSync(tmpPath, filePath);
45
+ }
46
+
47
+ // ─── Merge Queue ────────────────────────────────────────────────────────────
48
+
49
+ interface MergeQueue {
50
+ enqueue<T>(fn: () => Promise<T>): Promise<T>;
51
+ }
52
+
53
+ function createMergeQueue(): MergeQueue {
54
+ let tail: Promise<unknown> = Promise.resolve();
55
+ return {
56
+ enqueue<T>(fn: () => Promise<T>): Promise<T> {
57
+ const result = tail.then(() => fn());
58
+ tail = result.then(
59
+ () => undefined,
60
+ () => undefined
61
+ );
62
+ return result;
63
+ },
64
+ };
65
+ }
66
+
67
+ // ─── Write-Intent Analysis ────────────────────────────────────────────────────
68
+
69
+ /**
70
+ * Parse the `files_modified` field from PLAN.md frontmatter content.
71
+ * Supports two YAML formats:
72
+ * - Dash-list: `files_modified:\n - lib/foo.ts\n - lib/bar.ts`
73
+ * - Inline array: `files_modified: [lib/foo.ts, lib/bar.ts]`
74
+ *
75
+ * @param frontmatterContent - Raw string between the `---` markers of a PLAN.md
76
+ * @returns Array of file path strings declared as write targets, or [] if not present
77
+ */
78
+ function parseWriteIntent(frontmatterContent: string): string[] {
79
+ if (!frontmatterContent || frontmatterContent.trim() === '') return [];
80
+
81
+ // Try inline array format: files_modified: [lib/foo.ts, lib/bar.ts]
82
+ const inlineMatch = frontmatterContent.match(/^files_modified:\s*\[([^\]]*)\]\s*$/m);
83
+ if (inlineMatch) {
84
+ const inner = inlineMatch[1].trim();
85
+ if (!inner) return [];
86
+ return inner
87
+ .split(',')
88
+ .map((s: string) => s.trim())
89
+ .filter(Boolean);
90
+ }
91
+
92
+ // Try dash-list format: capture indented lines until a non-indented line or end of string
93
+ const fmLines = frontmatterContent.split('\n');
94
+ const startIdx = fmLines.findIndex((l: string) => /^files_modified:\s*$/.test(l));
95
+ if (startIdx >= 0) {
96
+ const items: string[] = [];
97
+ for (let i = startIdx + 1; i < fmLines.length; i++) {
98
+ const line = fmLines[i];
99
+ if (/^\S/.test(line)) break; // next field
100
+ const dashMatch = line.match(/^[ \t]+-[ \t]+(.+)$/);
101
+ if (dashMatch) {
102
+ const val = dashMatch[1].trim();
103
+ if (val) items.push(val);
104
+ }
105
+ }
106
+ return items;
107
+ }
108
+
109
+ return [];
110
+ }
111
+
112
+ /**
113
+ * Comparison result from `compareWriteIntent()`.
114
+ */
115
+ interface WriteIntentComparison {
116
+ unexpected: string[]; // Files modified but not declared
117
+ untouched: string[]; // Files declared but not modified
118
+ matches: string[]; // Files both declared and modified
119
+ }
120
+
121
+ /**
122
+ * Compare declared write-intent files against actually-modified files.
123
+ * Pure function — no side effects.
124
+ *
125
+ * @param declared - File paths listed in `files_modified` frontmatter
126
+ * @param actual - File paths from `git diff --name-only`
127
+ * @returns Categorized comparison result
128
+ */
129
+ function compareWriteIntent(declared: string[], actual: string[]): WriteIntentComparison {
130
+ const declaredSet = new Set(declared);
131
+ const actualSet = new Set(actual);
132
+
133
+ const matches = declared.filter((f) => actualSet.has(f));
134
+ const untouched = declared.filter((f) => !actualSet.has(f));
135
+ const unexpected = actual.filter((f) => !declaredSet.has(f));
136
+
137
+ return { unexpected, untouched, matches };
138
+ }
139
+
140
+ /**
141
+ * Format write-intent comparison results as log lines with `[WRITE-INTENT-MISMATCH]` prefix.
142
+ * Returns empty array when no mismatches.
143
+ *
144
+ * @param planId - The plan identifier (e.g. "89-03")
145
+ * @param comparison - Result from `compareWriteIntent()`
146
+ * @returns Array of formatted log lines
147
+ */
148
+ function formatWriteIntentMismatch(planId: string, comparison: WriteIntentComparison): string[] {
149
+ const lines: string[] = [];
150
+ for (const f of comparison.unexpected) {
151
+ lines.push(`[WRITE-INTENT-MISMATCH] Plan ${planId}: unexpected file modified: ${f}`);
152
+ }
153
+ for (const f of comparison.untouched) {
154
+ lines.push(`[WRITE-INTENT-MISMATCH] Plan ${planId}: declared file not modified: ${f}`);
155
+ }
156
+ return lines;
157
+ }
158
+
159
+ // ─── Wave Splitting ───────────────────────────────────────────────────────────
160
+
161
+ /**
162
+ * Options for buildWaves() — controls write-intent conflict detection.
163
+ */
164
+ interface BuildWavesOptions {
165
+ /** Map of phaseNumber -> files_modified list, used for conflict detection. */
166
+ filesModified?: Record<string, string[]>;
167
+ /** When true, skip conflict detection entirely (--force-parallel). */
168
+ forceParallel?: boolean;
169
+ }
170
+
171
+ /**
172
+ * Group phases into dependency waves using Kahn's algorithm.
173
+ * Phases with no dependencies land in wave 0; phases depending on wave-0
174
+ * phases land in wave 1, etc.
175
+ *
176
+ * When `options.filesModified` is provided and `options.forceParallel` is not
177
+ * true, a post-processing step separates phases that share modified files into
178
+ * different waves (write-intent conflict detection).
179
+ */
180
+ function buildWaves(
181
+ phases: Array<{ number: string; name: string; depends_on?: string | null }>,
182
+ options?: BuildWavesOptions
183
+ ): string[][] {
184
+ const graph: DependencyGraph = buildDependencyGraph(phases);
185
+ const initialWaves: string[][] = computeParallelGroups(graph);
186
+
187
+ if (!options?.filesModified || options?.forceParallel) {
188
+ return initialWaves;
189
+ }
190
+
191
+ // Post-process waves to separate phases with overlapping files_modified.
192
+ // We process the initial waves in order and keep splitting any wave that
193
+ // contains two phases sharing at least one file — producing extra waves as
194
+ // needed. The outer loop repeats until a full pass produces no splits.
195
+ const filesModified = options.filesModified;
196
+
197
+ /**
198
+ * Split a single wave into one or more sub-waves such that no two phases in
199
+ * the same sub-wave declare the same modified file.
200
+ */
201
+ function splitWave(wave: string[]): string[][] {
202
+ const subWaves: string[][] = [];
203
+ const subWaveFiles: Set<string>[] = [];
204
+
205
+ for (const phaseId of wave) {
206
+ const files = filesModified[phaseId] || [];
207
+ // Find the first existing sub-wave that has no file conflict.
208
+ let placed = false;
209
+ for (let i = 0; i < subWaves.length; i++) {
210
+ const hasConflict = files.some((f: string) => subWaveFiles[i].has(f));
211
+ if (!hasConflict) {
212
+ subWaves[i].push(phaseId);
213
+ files.forEach((f: string) => subWaveFiles[i].add(f));
214
+ placed = true;
215
+ break;
216
+ }
217
+ }
218
+ if (!placed) {
219
+ // Open a new sub-wave for this phase.
220
+ subWaves.push([phaseId]);
221
+ subWaveFiles.push(new Set<string>(files));
222
+ }
223
+ }
224
+
225
+ return subWaves;
226
+ }
227
+
228
+ // Apply splitWave to every initial wave and flatten the results into the
229
+ // final wave list, preserving the overall wave order.
230
+ const result: string[][] = [];
231
+ for (const wave of initialWaves) {
232
+ const subWaves = splitWave(wave);
233
+ for (const sw of subWaves) {
234
+ result.push(sw);
235
+ }
236
+ }
237
+
238
+ return result;
239
+ }
240
+
241
+ // ─── buildWavesFromPlans ──────────────────────────────────────────────────────
242
+
243
+ /**
244
+ * Group phases into dependency waves, refined by artifact-level dependency information.
245
+ *
246
+ * Extends `buildWaves` with fine-grained artifact DAG constraints:
247
+ * 1. Computes baseline waves using `buildWaves(phases)`.
248
+ * 2. If plans have no provides/requires declarations, returns baseline unchanged.
249
+ * 3. Builds an ArtifactDAG from plans and validates it for cycles.
250
+ * 4. If the DAG is invalid (cycles detected), logs a warning and returns baseline.
251
+ * 5. For each baseline wave, checks if any two plans have artifact-level dependencies
252
+ * (one requires what the other provides) — if so, splits them into separate sub-waves.
253
+ *
254
+ * @param plans - Array of plan artifacts parsed from PLAN.md frontmatter
255
+ * @param phases - Phase objects from roadmap analysis (for buildWaves baseline)
256
+ * @returns Refined wave grouping respecting both phase-level and artifact-level deps
257
+ */
258
+ function buildWavesFromPlans(
259
+ plans: PlanArtifact[],
260
+ phases: Array<{ number: string; name: string; depends_on?: string | null }>
261
+ ): string[][] {
262
+ // Step 1: baseline from phase-level depends_on
263
+ const baseline = buildWaves(phases);
264
+
265
+ // Step 2: no artifact declarations — return baseline unchanged
266
+ const hasArtifacts = plans.some((p) => p.provides.length > 0 || p.requires.length > 0);
267
+ if (plans.length === 0 || !hasArtifacts) {
268
+ return baseline;
269
+ }
270
+
271
+ // Step 3: build artifact DAG
272
+ const dag = buildArtifactDAG(plans);
273
+
274
+ // Step 4: validate — if cycles present, warn and return baseline
275
+ const validation = validateArtifactDAG(dag, plans);
276
+ if (!validation.valid) {
277
+ process.stderr.write(
278
+ `[buildWavesFromPlans] WARNING: Artifact DAG has cycles — falling back to baseline waves.\n`
279
+ );
280
+ return baseline;
281
+ }
282
+
283
+ // Step 5: for each baseline wave, split plans that have artifact-level deps on each other
284
+ // Build a quick lookup: planId → set of artifacts it provides
285
+ const planProvides = new Map<string, Set<string>>();
286
+ for (const plan of plans) {
287
+ const planId = `${plan.phase}-${String(plan.plan).padStart(2, '0')}`;
288
+ planProvides.set(planId, new Set<string>(plan.provides));
289
+ }
290
+
291
+ // Build lookup: planId → set of artifacts it requires
292
+ const planRequires = new Map<string, Set<string>>();
293
+ for (const plan of plans) {
294
+ const planId = `${plan.phase}-${String(plan.plan).padStart(2, '0')}`;
295
+ planRequires.set(planId, new Set<string>(plan.requires));
296
+ }
297
+
298
+ /**
299
+ * Check whether planA artifact-depends on planB
300
+ * (planA requires something planB provides, or vice versa).
301
+ */
302
+ function hasArtifactDep(planA: string, planB: string): boolean {
303
+ const aRequires = planRequires.get(planA) ?? new Set<string>();
304
+ const bProvides = planProvides.get(planB) ?? new Set<string>();
305
+ const bRequires = planRequires.get(planB) ?? new Set<string>();
306
+ const aProvides = planProvides.get(planA) ?? new Set<string>();
307
+
308
+ for (const req of aRequires) {
309
+ if (bProvides.has(req)) return true;
310
+ }
311
+ for (const req of bRequires) {
312
+ if (aProvides.has(req)) return true;
313
+ }
314
+ return false;
315
+ }
316
+
317
+ /**
318
+ * Split a single wave into sub-waves so that no two plans in the same sub-wave
319
+ * have artifact-level dependencies on each other.
320
+ */
321
+ function splitWaveByArtifacts(wave: string[]): string[][] {
322
+ const subWaves: string[][] = [];
323
+
324
+ for (const planId of wave) {
325
+ let placed = false;
326
+ for (const subWave of subWaves) {
327
+ const conflict = subWave.some((existing) => hasArtifactDep(planId, existing));
328
+ if (!conflict) {
329
+ subWave.push(planId);
330
+ placed = true;
331
+ break;
332
+ }
333
+ }
334
+ if (!placed) {
335
+ subWaves.push([planId]);
336
+ }
337
+ }
338
+
339
+ return subWaves;
340
+ }
341
+
342
+ const refined: string[][] = [];
343
+ for (const wave of baseline) {
344
+ const subWaves = splitWaveByArtifacts(wave);
345
+ for (const sw of subWaves) {
346
+ refined.push(sw);
347
+ }
348
+ }
349
+
350
+ return refined;
351
+ }
352
+
353
+ module.exports = {
354
+ atomicWriteFileSync,
355
+ createMergeQueue,
356
+ parseWriteIntent,
357
+ compareWriteIntent,
358
+ formatWriteIntentMismatch,
359
+ buildWaves,
360
+ buildWavesFromPlans,
361
+ };