@jbrowse/plugin-wiggle 2.1.0 → 2.1.3

package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js

@@ -1,244 +1,92 @@
 "use strict";
-var __extends = (this && this.__extends) || (function () {
-    var extendStatics = function (d, b) {
-        extendStatics = Object.setPrototypeOf ||
-            ({ __proto__: [] } instanceof Array && function (d, b) { d.__proto__ = b; }) ||
-            function (d, b) { for (var p in b) if (Object.prototype.hasOwnProperty.call(b, p)) d[p] = b[p]; };
-        return extendStatics(d, b);
-    };
-    return function (d, b) {
-        if (typeof b !== "function" && b !== null)
-            throw new TypeError("Class extends value " + String(b) + " is not a constructor or null");
-        extendStatics(d, b);
-        function __() { this.constructor = d; }
-        d.prototype = b === null ? Object.create(b) : (__.prototype = b.prototype, new __());
-    };
-})();
-var __assign = (this && this.__assign) || function () {
-    __assign = Object.assign || function(t) {
-        for (var s, i = 1, n = arguments.length; i < n; i++) {
-            s = arguments[i];
-            for (var p in s) if (Object.prototype.hasOwnProperty.call(s, p))
-                t[p] = s[p];
-        }
-        return t;
-    };
-    return __assign.apply(this, arguments);
-};
-var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
-    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
-    return new (P || (P = Promise))(function (resolve, reject) {
-        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
-        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
-        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
-        step((generator = generator.apply(thisArg, _arguments || [])).next());
-    });
-};
-var __generator = (this && this.__generator) || function (thisArg, body) {
-    var _ = { label: 0, sent: function() { if (t[0] & 1) throw t[1]; return t[1]; }, trys: [], ops: [] }, f, y, t, g;
-    return g = { next: verb(0), "throw": verb(1), "return": verb(2) }, typeof Symbol === "function" && (g[Symbol.iterator] = function() { return this; }), g;
-    function verb(n) { return function (v) { return step([n, v]); }; }
-    function step(op) {
-        if (f) throw new TypeError("Generator is already executing.");
-        while (_) try {
-            if (f = 1, y && (t = op[0] & 2 ? y["return"] : op[0] ? y["throw"] || ((t = y["return"]) && t.call(y), 0) : y.next) && !(t = t.call(y, op[1])).done) return t;
-            if (y = 0, t) op = [op[0] & 2, t.value];
-            switch (op[0]) {
-                case 0: case 1: t = op; break;
-                case 4: _.label++; return { value: op[1], done: false };
-                case 5: _.label++; y = op[1]; op = [0]; continue;
-                case 7: op = _.ops.pop(); _.trys.pop(); continue;
-                default:
-                    if (!(t = _.trys, t = t.length > 0 && t[t.length - 1]) && (op[0] === 6 || op[0] === 2)) { _ = 0; continue; }
-                    if (op[0] === 3 && (!t || (op[1] > t[0] && op[1] < t[3]))) { _.label = op[1]; break; }
-                    if (op[0] === 6 && _.label < t[1]) { _.label = t[1]; t = op; break; }
-                    if (t && _.label < t[2]) { _.label = t[2]; _.ops.push(op); break; }
-                    if (t[2]) _.ops.pop();
-                    _.trys.pop(); continue;
-            }
-            op = body.call(thisArg, _);
-        } catch (e) { op = [6, e]; y = 0; } finally { f = t = 0; }
-        if (op[0] & 5) throw op[1]; return { value: op[0] ? op[1] : void 0, done: true };
-    }
-};
-var __rest = (this && this.__rest) || function (s, e) {
-    var t = {};
-    for (var p in s) if (Object.prototype.hasOwnProperty.call(s, p) && e.indexOf(p) < 0)
-        t[p] = s[p];
-    if (s != null && typeof Object.getOwnPropertySymbols === "function")
-        for (var i = 0, p = Object.getOwnPropertySymbols(s); i < p.length; i++) {
-            if (e.indexOf(p[i]) < 0 && Object.prototype.propertyIsEnumerable.call(s, p[i]))
-                t[p[i]] = s[p[i]];
-        }
-    return t;
-};
-var __read = (this && this.__read) || function (o, n) {
-    var m = typeof Symbol === "function" && o[Symbol.iterator];
-    if (!m) return o;
-    var i = m.call(o), r, ar = [], e;
-    try {
-        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
-    }
-    catch (error) { e = { error: error }; }
-    finally {
-        try {
-            if (r && !r.done && (m = i["return"])) m.call(i);
-        }
-        finally { if (e) throw e.error; }
-    }
-    return ar;
-};
-var __spreadArray = (this && this.__spreadArray) || function (to, from, pack) {
-    if (pack || arguments.length === 2) for (var i = 0, l = from.length, ar; i < l; i++) {
-        if (ar || !(i in from)) {
-            if (!ar) ar = Array.prototype.slice.call(from, 0, i);
-            ar[i] = from[i];
-        }
-    }
-    return to.concat(ar || Array.prototype.slice.call(from));
-};
 Object.defineProperty(exports, "__esModule", { value: true });
-var BaseAdapter_1 = require("@jbrowse/core/data_adapters/BaseAdapter");
-var rxjs_1 = require("@jbrowse/core/util/rxjs");
-var util_1 = require("@jbrowse/core/util");
-var rxjs_2 = require("rxjs");
-var operators_1 = require("rxjs/operators");
+const BaseAdapter_1 = require("@jbrowse/core/data_adapters/BaseAdapter");
+const rxjs_1 = require("@jbrowse/core/util/rxjs");
+const util_1 = require("@jbrowse/core/util");
+const rxjs_2 = require("rxjs");
+const operators_1 = require("rxjs/operators");
 function getFilename(uri) {
-    var filename = uri.slice(uri.lastIndexOf('/') + 1);
+    const filename = uri.slice(uri.lastIndexOf('/') + 1);
     return filename.slice(0, filename.lastIndexOf('.'));
 }
-var MultiWiggleAdapter = /** @class */ (function (_super) {
-    __extends(MultiWiggleAdapter, _super);
-    function MultiWiggleAdapter() {
-        return _super !== null && _super.apply(this, arguments) || this;
+class MultiWiggleAdapter extends BaseAdapter_1.BaseFeatureDataAdapter {
+    async getAdapters() {
+        const getSubAdapter = this.getSubAdapter;
+        if (!getSubAdapter) {
+            throw new Error('no getSubAdapter available');
+        }
+        let subConfs = this.getConf('subadapters');
+        if (!(subConfs === null || subConfs === void 0 ? void 0 : subConfs.length)) {
+            const entries = this.getConf('bigWigs');
+            subConfs = entries.map(entry => ({
+                type: 'BigWigAdapter',
+                source: getFilename(entry),
+                bigWigLocation: {
+                    uri: entry,
+                },
+            }));
+        }
+        return Promise.all(
+        // eslint-disable-next-line @typescript-eslint/no-explicit-any
+        subConfs.map(async (conf) => {
+            const dataAdapter = (await getSubAdapter(conf))
+                .dataAdapter;
+            return {
+                source: conf.name || dataAdapter.id,
+                ...conf,
+                dataAdapter,
+            };
+        }));
     }
-    MultiWiggleAdapter.prototype.getAdapters = function () {
-        return __awaiter(this, void 0, void 0, function () {
-            var getSubAdapter, subConfs, entries;
-            var _this = this;
-            return __generator(this, function (_a) {
-                getSubAdapter = this.getSubAdapter;
-                if (!getSubAdapter) {
-                    throw new Error('no getSubAdapter available');
-                }
-                subConfs = this.getConf('subadapters');
-                if (!(subConfs === null || subConfs === void 0 ? void 0 : subConfs.length)) {
-                    entries = this.getConf('bigWigs');
-                    subConfs = entries.map(function (entry) { return ({
-                        type: 'BigWigAdapter',
-                        source: getFilename(entry),
-                        bigWigLocation: {
-                            uri: entry,
-                        },
-                    }); });
-                }
-                return [2 /*return*/, Promise.all(
-                    // eslint-disable-next-line @typescript-eslint/no-explicit-any
-                    subConfs.map(function (conf) { return __awaiter(_this, void 0, void 0, function () {
-                        var dataAdapter;
-                        return __generator(this, function (_a) {
-                            switch (_a.label) {
-                                case 0: return [4 /*yield*/, getSubAdapter(conf)];
-                                case 1:
-                                    dataAdapter = (_a.sent())
-                                        .dataAdapter;
-                                    return [2 /*return*/, __assign(__assign({ source: dataAdapter.id }, conf), { dataAdapter: dataAdapter })];
-                            }
-                        });
-                    }); }))];
-            });
-        });
-    };
     // note: can't really have dis-agreeing refNames
-    MultiWiggleAdapter.prototype.getRefNames = function (opts) {
-        return __awaiter(this, void 0, void 0, function () {
-            var adapters;
-            return __generator(this, function (_a) {
-                switch (_a.label) {
-                    case 0: return [4 /*yield*/, this.getAdapters()];
-                    case 1:
-                        adapters = _a.sent();
-                        return [2 /*return*/, adapters[0].dataAdapter.getRefNames(opts)];
-                }
-            });
-        });
-    };
-    MultiWiggleAdapter.prototype.getGlobalStats = function (opts) {
-        return __awaiter(this, void 0, void 0, function () {
-            var adapters, stats, scoreMin, scoreMax;
-            return __generator(this, function (_a) {
-                switch (_a.label) {
-                    case 0: return [4 /*yield*/, this.getAdapters()];
-                    case 1:
-                        adapters = _a.sent();
-                        return [4 /*yield*/, Promise.all(
-                            // @ts-ignore
-                            adapters.map(function (adp) { var _a, _b; return (_b = (_a = adp.dataAdapter).getGlobalStats) === null || _b === void 0 ? void 0 : _b.call(_a, opts); }))];
-                    case 2:
-                        stats = (_a.sent()).filter(function (f) { return !!f; });
-                        scoreMin = Math.min.apply(Math, __spreadArray([], __read(stats.map(function (s) { return s.scoreMin; })), false));
-                        scoreMax = Math.max.apply(Math, __spreadArray([], __read(stats.map(function (s) { return s.scoreMax; })), false));
-                        return [2 /*return*/, { scoreMin: scoreMin, scoreMax: scoreMax }];
-                }
-            });
-        });
-    };
-    MultiWiggleAdapter.prototype.getFeatures = function (region, opts) {
-        var _this = this;
-        if (opts === void 0) { opts = {}; }
-        return (0, rxjs_1.ObservableCreate)(function (observer) { return __awaiter(_this, void 0, void 0, function () {
-            var adapters;
-            return __generator(this, function (_a) {
-                switch (_a.label) {
-                    case 0: return [4 /*yield*/, this.getAdapters()];
-                    case 1:
-                        adapters = _a.sent();
-                        rxjs_2.merge.apply(void 0, __spreadArray([], __read(adapters.map(function (adp) {
-                            return adp.dataAdapter.getFeatures(region, opts).pipe((0, operators_1.map)(function (p) {
-                                // add source field if it does not exist
-                                return p.get('source')
-                                    ? p
-                                    : new util_1.SimpleFeature(__assign(__assign({}, p.toJSON()), { uniqueId: adp.source + '-' + p.id(), source: adp.source }));
-                            }));
-                        })), false)).subscribe(observer);
-                        return [2 /*return*/];
-                }
-            });
-        }); }, opts.signal);
-    };
+    async getRefNames(opts) {
+        const adapters = await this.getAdapters();
+        const allNames = await Promise.all(adapters.map(a => a.dataAdapter.getRefNames(opts)));
+        return [...new Set(allNames.flat())];
+    }
+    async getGlobalStats(opts) {
+        const adapters = await this.getAdapters();
+        const stats = (await Promise.all(
+        // @ts-ignore
+        adapters.map(adp => { var _a, _b; return (_b = (_a = adp.dataAdapter).getGlobalStats) === null || _b === void 0 ? void 0 : _b.call(_a, opts); }))).filter(f => !!f);
+        const scoreMin = Math.min(...stats.map(s => s.scoreMin));
+        const scoreMax = Math.max(...stats.map(s => s.scoreMax));
+        return { scoreMin, scoreMax };
+    }
+    getFeatures(region, opts = {}) {
+        return (0, rxjs_1.ObservableCreate)(async (observer) => {
+            const adapters = await this.getAdapters();
+            (0, rxjs_2.merge)(...adapters.map(adp => adp.dataAdapter.getFeatures(region, opts).pipe((0, operators_1.map)(p => 
+            // add source field if it does not exist
+            p.get('source')
+                ? p
+                : new util_1.SimpleFeature({
+                    ...p.toJSON(),
+                    uniqueId: adp.source + '-' + p.id(),
+                    source: adp.source,
+                }))))).subscribe(observer);
+        }, opts.signal);
+    }
     // always render bigwig instead of calculating a feature density for it
-    MultiWiggleAdapter.prototype.estimateRegionsStats = function (_regions) {
-        return __awaiter(this, void 0, void 0, function () {
-            return __generator(this, function (_a) {
-                return [2 /*return*/, { featureDensity: 0 }];
-            });
-        });
-    };
+    async estimateRegionsStats(_regions) {
+        return { featureDensity: 0 };
+    }
     // in another adapter type, this could be dynamic depending on region or
     // something, but it is static for this particular multi-wiggle adapter type
-    MultiWiggleAdapter.prototype.getSources = function () {
-        return __awaiter(this, void 0, void 0, function () {
-            var adapters;
-            return __generator(this, function (_a) {
-                switch (_a.label) {
-                    case 0: return [4 /*yield*/, this.getAdapters()];
-                    case 1:
-                        adapters = _a.sent();
-                        return [2 /*return*/, adapters.map(function (_a) {
-                                var dataAdapter = _a.dataAdapter, source = _a.source, rest = __rest(_a, ["dataAdapter", "source"]);
-                                return (__assign({ name: source }, rest));
-                            })];
-                }
-            });
-        });
-    };
-    MultiWiggleAdapter.prototype.freeResources = function () { };
-    MultiWiggleAdapter.capabilities = [
-        'hasResolution',
-        'hasLocalStats',
-        'hasGlobalStats',
-    ];
-    return MultiWiggleAdapter;
-}(BaseAdapter_1.BaseFeatureDataAdapter));
+    async getSources() {
+        const adapters = await this.getAdapters();
+        return adapters.map(({ dataAdapter, source, name, ...rest }) => ({
+            name: source,
+            __name: name,
+            ...rest,
+        }));
+    }
+    freeResources() { }
+}
 exports.default = MultiWiggleAdapter;
+MultiWiggleAdapter.capabilities = [
+    'hasResolution',
+    'hasLocalStats',
+    'hasGlobalStats',
+];
 //# sourceMappingURL=MultiWiggleAdapter.js.map

package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js.map

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package/dist/MultiWiggleAdapter/configSchema.js

@@ -1,6 +1,6 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-var configuration_1 = require("@jbrowse/core/configuration");
+const configuration_1 = require("@jbrowse/core/configuration");
 exports.default = (0, configuration_1.ConfigurationSchema)('MultiWiggleAdapter', {
     subadapters: {
         type: 'frozen',

package/dist/MultiWiggleAdapter/configSchema.js.map

@@ -1 +1 @@
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+{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/MultiWiggleAdapter/configSchema.ts"],"names":[],"mappings":";;AAAA,+DAAiE;AAEjE,kBAAe,IAAA,mCAAmB,EAChC,oBAAoB,EACpB;IACE,WAAW,EAAE;QACX,IAAI,EAAE,QAAQ;QACd,YAAY,EAAE,EAAE;KACjB;IACD,OAAO,EAAE;QACP,IAAI,EAAE,QAAQ;QACd,YAAY,EAAE,EAAE;KACjB;CACF,EACD,EAAE,eAAe,EAAE,IAAI,EAAE,CAC1B,CAAA"}

package/dist/MultiWiggleAdapter/index.js

@@ -26,22 +26,18 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var configSchema_1 = __importDefault(require("./configSchema"));
-var AdapterType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/AdapterType"));
-exports.default = (function (pluginManager) {
-    pluginManager.addAdapterType(function () {
-        return new AdapterType_1.default({
-            name: 'MultiWiggleAdapter',
-            configSchema: configSchema_1.default,
-            adapterCapabilities: [
-                'hasResolution',
-                'hasLocalStats',
-                'hasGlobalStats',
-            ],
-            getAdapterClass: function () {
-                return Promise.resolve().then(function () { return __importStar(require('./MultiWiggleAdapter')); }).then(function (r) { return r.default; });
-            },
-        });
-    });
-});
+const configSchema_1 = __importDefault(require("./configSchema"));
+const AdapterType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/AdapterType"));
+exports.default = (pluginManager) => {
+    pluginManager.addAdapterType(() => new AdapterType_1.default({
+        name: 'MultiWiggleAdapter',
+        configSchema: configSchema_1.default,
+        adapterCapabilities: [
+            'hasResolution',
+            'hasLocalStats',
+            'hasGlobalStats',
+        ],
+        getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./MultiWiggleAdapter'))).then(r => r.default),
+    }));
+};
 //# sourceMappingURL=index.js.map

package/dist/MultiWiggleAdapter/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/MultiWiggleAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,kEAAyC;AACzC,kGAAyE;AAGzE,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;QACd,IAAI,EAAE,oBAAoB;QAC1B,YAAY,EAAZ,sBAAY;QACZ,mBAAmB,EAAE;YACnB,eAAe;YACf,eAAe;YACf,gBAAgB;SACjB;QACD,eAAe,EAAE,GAAG,EAAE,CACpB,kDAAO,sBAAsB,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACtD,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}

package/dist/MultiWiggleAddTrackWidget/AddTrackWorkflow.js

@@ -1,15 +1,4 @@
 "use strict";
-var __assign = (this && this.__assign) || function () {
-    __assign = Object.assign || function(t) {
-        for (var s, i = 1, n = arguments.length; i < n; i++) {
-            s = arguments[i];
-            for (var p in s) if (Object.prototype.hasOwnProperty.call(s, p))
-                t[p] = s[p];
-        }
-        return t;
-    };
-    return __assign.apply(this, arguments);
-};
 var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
     if (k2 === undefined) k2 = k;
     var desc = Object.getOwnPropertyDescriptor(m, k);
@@ -33,29 +22,13 @@ var __importStar = (this && this.__importStar) || function (mod) {
     __setModuleDefault(result, mod);
     return result;
 };
-var __read = (this && this.__read) || function (o, n) {
-    var m = typeof Symbol === "function" && o[Symbol.iterator];
-    if (!m) return o;
-    var i = m.call(o), r, ar = [], e;
-    try {
-        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
-    }
-    catch (error) { e = { error: error }; }
-    finally {
-        try {
-            if (r && !r.done && (m = i["return"])) m.call(i);
-        }
-        finally { if (e) throw e.error; }
-    }
-    return ar;
-};
 Object.defineProperty(exports, "__esModule", { value: true });
-var react_1 = __importStar(require("react"));
-var material_1 = require("@mui/material");
-var mui_1 = require("tss-react/mui");
-var util_1 = require("@jbrowse/core/util");
-var tracks_1 = require("@jbrowse/core/util/tracks");
-var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
+const react_1 = __importStar(require("react"));
+const material_1 = require("@mui/material");
+const mui_1 = require("tss-react/mui");
+const util_1 = require("@jbrowse/core/util");
+const tracks_1 = require("@jbrowse/core/util/tracks");
+const useStyles = (0, mui_1.makeStyles)()(theme => ({
     textbox: {
         width: '100%',
     },
@@ -68,22 +41,20 @@ var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
         marginBottom: 100,
         display: 'block',
     },
-}); });
-function MultiWiggleWidget(_a) {
-    var model = _a.model;
-    var classes = useStyles().classes;
-    var _b = __read((0, react_1.useState)(''), 2), val = _b[0], setVal = _b[1];
-    var _c = __read((0, react_1.useState)('MultiWiggle ' + Date.now()), 2), trackName = _c[0], setTrackName = _c[1];
+}));
+function MultiWiggleWidget({ model }) {
+    const { classes } = useStyles();
+    const [val, setVal] = (0, react_1.useState)('');
+    const [trackName, setTrackName] = (0, react_1.useState)('MultiWiggle ' + Date.now());
     return (react_1.default.createElement(material_1.Paper, { className: classes.paper },
         react_1.default.createElement("ul", null,
             react_1.default.createElement("li", null, "Enter list of URLs for bigwig files in the textbox"),
             react_1.default.createElement("li", null, "Or, use the button below the text box to select files from your computer")),
-        react_1.default.createElement(material_1.TextField, { multiline: true, rows: 10, value: val, onChange: function (event) { return setVal(event.target.value); }, placeholder: 'Paste list of URLs here, or use file selector below', variant: "outlined", className: classes.textbox }),
+        react_1.default.createElement(material_1.TextField, { multiline: true, rows: 10, value: val, onChange: event => setVal(event.target.value), placeholder: 'Paste list of URLs here, or use file selector below', variant: "outlined", className: classes.textbox }),
         react_1.default.createElement(material_1.Button, { variant: "outlined", component: "label" },
             "Choose Files from your computer",
-            react_1.default.createElement("input", { type: "file", hidden: true, multiple: true, onChange: function (_a) {
-                    var target = _a.target;
-                    var res = Array.from((target === null || target === void 0 ? void 0 : target.files) || []).map(function (file) { return ({
+            react_1.default.createElement("input", { type: "file", hidden: true, multiple: true, onChange: ({ target }) => {
+                    const res = Array.from((target === null || target === void 0 ? void 0 : target.files) || []).map(file => ({
                         type: 'BigWigAdapter',
                         bigWigLocation: util_1.isElectron
                             ? {
@@ -92,34 +63,37 @@ function MultiWiggleWidget(_a) {
                             }
                             : (0, tracks_1.storeBlobLocation)({ blob: file }),
                         source: file.name,
-                    }); });
+                    }));
                     setVal(JSON.stringify(res, null, 2));
                 } })),
-        react_1.default.createElement(material_1.TextField, { value: trackName, onChange: function (event) { return setTrackName(event.target.value); }, helperText: "Track name" }),
-        react_1.default.createElement(material_1.Button, { variant: "contained", className: classes.submit, onClick: function () {
+        react_1.default.createElement(material_1.TextField, { value: trackName, onChange: event => setTrackName(event.target.value), helperText: "Track name" }),
+        react_1.default.createElement(material_1.Button, { variant: "contained", className: classes.submit, onClick: () => {
                 var _a;
-                var session = (0, util_1.getSession)(model);
-                var trackId = [
-                    "".concat(trackName.toLowerCase().replace(/ /g, '_'), "-").concat(Date.now()),
-                    "".concat(session.adminMode ? '' : '-sessionTrack'),
+                const session = (0, util_1.getSession)(model);
+                const trackId = [
+                    `${trackName.toLowerCase().replace(/ /g, '_')}-${Date.now()}`,
+                    `${session.adminMode ? '' : '-sessionTrack'}`,
                 ].join('');
                 // allow list of bigwigs in JSON format or line-by-line
-                var bigWigs;
+                let bigWigs;
                 try {
                     bigWigs = JSON.parse(val);
                 }
                 catch (e) {
                     bigWigs = val.split('\n');
                 }
-                var obj = typeof bigWigs[0] === 'string'
-                    ? { bigWigs: bigWigs }
+                const obj = typeof bigWigs[0] === 'string'
+                    ? { bigWigs }
                     : { subadapters: bigWigs };
                 session.addTrackConf({
-                    trackId: trackId,
+                    trackId,
                     type: 'MultiQuantitativeTrack',
                     name: trackName,
                     assemblyNames: [model.assembly],
-                    adapter: __assign({ type: 'MultiWiggleAdapter' }, obj),
+                    adapter: {
+                        type: 'MultiWiggleAdapter',
+                        ...obj,
+                    },
                 });
                 (_a = model.view) === null || _a === void 0 ? void 0 : _a.showTrack(trackId);
                 model.clearData();
@@ -130,7 +104,7 @@ function MultiWiggleWidget(_a) {
             react_1.default.createElement("li", null,
                 "The list of bigwig files in the text box can be a list of URLs, or a list of elements like",
                 ' ',
-                react_1.default.createElement("code", null, "[{\"type\":\"BigWigAdapter\",\"bigWigLocation\":{\"uri\":\"http://host/file.bw\"}, \"color\":\"green\",\"source\":\"name for subtrack\"}]"),
+                react_1.default.createElement("code", null, `[{"type":"BigWigAdapter","bigWigLocation":{"uri":"http://host/file.bw"}, "color":"green","source":"name for subtrack"}]`),
                 ' ',
                 "to apply e.g. the color attribute to the view"),
             react_1.default.createElement("li", null, "Adding local files will update the textbox with JSON contents that are ready to submit with the \"Submit\" button"))));

package/dist/MultiWiggleAddTrackWidget/AddTrackWorkflow.js.map

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package/dist/MultiWiggleAddTrackWidget/index.js

@@ -3,17 +3,15 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var pluggableElementTypes_1 = require("@jbrowse/core/pluggableElementTypes");
-var mobx_state_tree_1 = require("mobx-state-tree");
+const pluggableElementTypes_1 = require("@jbrowse/core/pluggableElementTypes");
+const mobx_state_tree_1 = require("mobx-state-tree");
 // locals
-var AddTrackWorkflow_1 = __importDefault(require("./AddTrackWorkflow"));
-exports.default = (function (pm) {
-    pm.addAddTrackWorkflowType(function () {
-        return new pluggableElementTypes_1.AddTrackWorkflowType({
-            name: 'Multi-wiggle track',
-            ReactComponent: AddTrackWorkflow_1.default,
-            stateModel: mobx_state_tree_1.types.model({}),
-        });
-    });
-});
+const AddTrackWorkflow_1 = __importDefault(require("./AddTrackWorkflow"));
+exports.default = (pm) => {
+    pm.addAddTrackWorkflowType(() => new pluggableElementTypes_1.AddTrackWorkflowType({
+        name: 'Multi-wiggle track',
+        ReactComponent: AddTrackWorkflow_1.default,
+        stateModel: mobx_state_tree_1.types.model({}),
+    }));
+};
 //# sourceMappingURL=index.js.map

package/dist/MultiWiggleAddTrackWidget/index.js.map

@@ -1 +1 @@
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