@jbrowse/plugin-wiggle 2.1.0 → 2.1.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BigWigAdapter/BigWigAdapter.js +74 -200
- package/dist/BigWigAdapter/BigWigAdapter.js.map +1 -1
- package/dist/BigWigAdapter/configSchema.js +1 -1
- package/dist/BigWigAdapter/configSchema.js.map +1 -1
- package/dist/BigWigAdapter/index.js +14 -16
- package/dist/BigWigAdapter/index.js.map +1 -1
- package/dist/CreateMultiWiggleExtension/ConfirmDialog.js +12 -29
- package/dist/CreateMultiWiggleExtension/ConfirmDialog.js.map +1 -1
- package/dist/CreateMultiWiggleExtension/index.js +23 -57
- package/dist/CreateMultiWiggleExtension/index.js.map +1 -1
- package/dist/DensityRenderer/DensityRenderer.js +6 -66
- package/dist/DensityRenderer/DensityRenderer.js.map +1 -1
- package/dist/DensityRenderer/configSchema.js +3 -3
- package/dist/DensityRenderer/configSchema.js.map +1 -1
- package/dist/DensityRenderer/index.js +11 -13
- package/dist/DensityRenderer/index.js.map +1 -1
- package/dist/LinePlotRenderer/LinePlotRenderer.js +11 -78
- package/dist/LinePlotRenderer/LinePlotRenderer.js.map +1 -1
- package/dist/LinePlotRenderer/configSchema.js +3 -3
- package/dist/LinePlotRenderer/configSchema.js.map +1 -1
- package/dist/LinePlotRenderer/index.js +11 -13
- package/dist/LinePlotRenderer/index.js.map +1 -1
- package/dist/LinearWiggleDisplay/components/SetColorDialog.js +18 -35
- package/dist/LinearWiggleDisplay/components/SetColorDialog.js.map +1 -1
- package/dist/LinearWiggleDisplay/components/SetMinMaxDialog.js +16 -32
- package/dist/LinearWiggleDisplay/components/SetMinMaxDialog.js.map +1 -1
- package/dist/LinearWiggleDisplay/components/Tooltip.js +15 -26
- package/dist/LinearWiggleDisplay/components/Tooltip.js.map +1 -1
- package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js +15 -26
- package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js.map +1 -1
- package/dist/LinearWiggleDisplay/components/YScaleBar.js +6 -18
- package/dist/LinearWiggleDisplay/components/YScaleBar.js.map +1 -1
- package/dist/LinearWiggleDisplay/index.js +12 -12
- package/dist/LinearWiggleDisplay/index.js.map +1 -1
- package/dist/LinearWiggleDisplay/models/configSchema.js +6 -6
- package/dist/LinearWiggleDisplay/models/configSchema.js.map +1 -1
- package/dist/LinearWiggleDisplay/models/model.js +378 -451
- package/dist/LinearWiggleDisplay/models/model.js.map +1 -1
- package/dist/MultiDensityRenderer/MultiDensityRenderer.js +32 -125
- package/dist/MultiDensityRenderer/MultiDensityRenderer.js.map +1 -1
- package/dist/MultiDensityRenderer/configSchema.js +3 -3
- package/dist/MultiDensityRenderer/configSchema.js.map +1 -1
- package/dist/MultiDensityRenderer/index.js +11 -13
- package/dist/MultiDensityRenderer/index.js.map +1 -1
- package/dist/MultiLineRenderer/MultiLineRenderer.js +21 -114
- package/dist/MultiLineRenderer/MultiLineRenderer.js.map +1 -1
- package/dist/MultiLineRenderer/configSchema.js +4 -4
- package/dist/MultiLineRenderer/configSchema.js.map +1 -1
- package/dist/MultiLineRenderer/index.js +11 -13
- package/dist/MultiLineRenderer/index.js.map +1 -1
- package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js +72 -120
- package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js.map +1 -1
- package/dist/MultiLinearWiggleDisplay/components/SetMinMaxDialog.js +16 -32
- package/dist/MultiLinearWiggleDisplay/components/SetMinMaxDialog.js.map +1 -1
- package/dist/MultiLinearWiggleDisplay/components/Tooltip.js +21 -50
- package/dist/MultiLinearWiggleDisplay/components/Tooltip.js.map +1 -1
- package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +2 -2
- package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js +53 -92
- package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js.map +1 -1
- package/dist/MultiLinearWiggleDisplay/components/YScaleBar.js +6 -18
- package/dist/MultiLinearWiggleDisplay/components/YScaleBar.js.map +1 -1
- package/dist/MultiLinearWiggleDisplay/components/util.js +16 -18
- package/dist/MultiLinearWiggleDisplay/components/util.js.map +1 -1
- package/dist/MultiLinearWiggleDisplay/index.js +9 -9
- package/dist/MultiLinearWiggleDisplay/index.js.map +1 -1
- package/dist/MultiLinearWiggleDisplay/models/configSchema.js +8 -8
- package/dist/MultiLinearWiggleDisplay/models/configSchema.js.map +1 -1
- package/dist/MultiLinearWiggleDisplay/models/model.js +489 -566
- package/dist/MultiLinearWiggleDisplay/models/model.js.map +1 -1
- package/dist/MultiQuantitativeTrack/index.js +8 -8
- package/dist/MultiQuantitativeTrack/index.js.map +1 -1
- package/dist/MultiRowLineRenderer/MultiRowLineRenderer.js +29 -121
- package/dist/MultiRowLineRenderer/MultiRowLineRenderer.js.map +1 -1
- package/dist/MultiRowLineRenderer/configSchema.js +4 -4
- package/dist/MultiRowLineRenderer/configSchema.js.map +1 -1
- package/dist/MultiRowLineRenderer/index.js +11 -13
- package/dist/MultiRowLineRenderer/index.js.map +1 -1
- package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +35 -131
- package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js.map +1 -1
- package/dist/MultiRowXYPlotRenderer/configSchema.js +4 -4
- package/dist/MultiRowXYPlotRenderer/configSchema.js.map +1 -1
- package/dist/MultiRowXYPlotRenderer/index.js +11 -13
- package/dist/MultiRowXYPlotRenderer/index.js.map +1 -1
- package/dist/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +1 -0
- package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js +80 -232
- package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js.map +1 -1
- package/dist/MultiWiggleAdapter/configSchema.js +1 -1
- package/dist/MultiWiggleAdapter/configSchema.js.map +1 -1
- package/dist/MultiWiggleAdapter/index.js +14 -18
- package/dist/MultiWiggleAdapter/index.js.map +1 -1
- package/dist/MultiWiggleAddTrackWidget/AddTrackWorkflow.js +30 -56
- package/dist/MultiWiggleAddTrackWidget/AddTrackWorkflow.js.map +1 -1
- package/dist/MultiWiggleAddTrackWidget/index.js +10 -12
- package/dist/MultiWiggleAddTrackWidget/index.js.map +1 -1
- package/dist/MultiWiggleRendering.js +45 -109
- package/dist/MultiWiggleRendering.js.map +1 -1
- package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.js +24 -120
- package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.js.map +1 -1
- package/dist/MultiXYPlotRenderer/configSchema.js +4 -4
- package/dist/MultiXYPlotRenderer/configSchema.js.map +1 -1
- package/dist/MultiXYPlotRenderer/index.js +11 -13
- package/dist/MultiXYPlotRenderer/index.js.map +1 -1
- package/dist/QuantitativeTrack/index.js +8 -8
- package/dist/QuantitativeTrack/index.js.map +1 -1
- package/dist/Tooltip.js +26 -54
- package/dist/Tooltip.js.map +1 -1
- package/dist/WiggleBaseRenderer.d.ts +6 -6
- package/dist/WiggleBaseRenderer.js +34 -125
- package/dist/WiggleBaseRenderer.js.map +1 -1
- package/dist/WiggleRPC/rpcMethods.d.ts +2 -2
- package/dist/WiggleRPC/rpcMethods.js +101 -244
- package/dist/WiggleRPC/rpcMethods.js.map +1 -1
- package/dist/WiggleRendering.js +20 -69
- package/dist/WiggleRendering.js.map +1 -1
- package/dist/XYPlotRenderer/XYPlotRenderer.js +24 -121
- package/dist/XYPlotRenderer/XYPlotRenderer.js.map +1 -1
- package/dist/XYPlotRenderer/configSchema.js +4 -4
- package/dist/XYPlotRenderer/configSchema.js.map +1 -1
- package/dist/XYPlotRenderer/index.js +11 -13
- package/dist/XYPlotRenderer/index.js.map +1 -1
- package/dist/configSchema.js +2 -2
- package/dist/configSchema.js.map +1 -1
- package/dist/drawxy.js +192 -311
- package/dist/drawxy.js.map +1 -1
- package/dist/index.js +44 -62
- package/dist/index.js.map +1 -1
- package/dist/util.js +105 -168
- package/dist/util.js.map +1 -1
- package/esm/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +1 -0
- package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js +5 -3
- package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js.map +1 -1
- package/esm/WiggleBaseRenderer.d.ts +6 -6
- package/esm/WiggleBaseRenderer.js +4 -3
- package/esm/WiggleBaseRenderer.js.map +1 -1
- package/esm/WiggleRPC/rpcMethods.d.ts +2 -2
- package/esm/WiggleRPC/rpcMethods.js.map +1 -1
- package/package.json +2 -3
- package/src/MultiWiggleAdapter/MultiWiggleAdapter.ts +7 -3
- package/src/WiggleBaseRenderer.tsx +4 -3
- package/src/WiggleRPC/rpcMethods.ts +8 -2
- package/src/declare.d.ts +0 -2
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const bbi_1 = require("@gmod/bbi");
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const BaseAdapter_1 = require("@jbrowse/core/data_adapters/BaseAdapter");
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const io_1 = require("@jbrowse/core/util/io");
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const util_1 = require("@jbrowse/core/util");
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const stats_1 = require("@jbrowse/core/util/stats");
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class BigWigAdapter extends BaseAdapter_1.BaseFeatureDataAdapter {
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async setupPre(opts) {
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getFeatures(region, opts = {}) {
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const source = this.getConf('source');
|
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const { bigwig } = await this.setup(opts);
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|
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var _a = opts.bpPerPx, bpPerPx = _a === void 0 ? 0 : _a, signal = opts.signal, _b = opts.resolution, resolution = _b === void 0 ? 1 : _b, _c = opts.statusCallback, statusCallback = _c === void 0 ? function () { } : _c;
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|
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|
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|
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|
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|
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const uniqueId = `${source}:${region.refName}:${data.start}-${data.end}`;
|
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|
|
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|
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|
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|
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|
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|
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|
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|
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|
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|
|
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|
+
});
|
|
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|
+
}
|
|
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|
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|
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|
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}, signal);
|
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|
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];
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|
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return BigWigAdapter;
|
|
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|
-
}(BaseAdapter_1.BaseFeatureDataAdapter));
|
|
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|
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async estimateRegionsStats(_regions) {
|
|
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|
+
return { featureDensity: 0 };
|
|
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|
+
}
|
|
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|
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|
|
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|
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}
|
|
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|
exports.default = BigWigAdapter;
|
|
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|
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BigWigAdapter.capabilities = [
|
|
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|
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|
|
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|
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'hasLocalStats',
|
|
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|
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'hasGlobalStats',
|
|
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|
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];
|
|
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|
//# sourceMappingURL=BigWigAdapter.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"BigWigAdapter.js","sourceRoot":"","sources":["../../src/BigWigAdapter/BigWigAdapter.ts"],"names":[],"mappings":"
|
|
1
|
+
{"version":3,"file":"BigWigAdapter.js","sourceRoot":"","sources":["../../src/BigWigAdapter/BigWigAdapter.ts"],"names":[],"mappings":";;AAAA,mCAAkC;AAClC,yEAGgD;AAEhD,8CAAoD;AACpD,6CAA0D;AAC1D,kDAA0D;AAC1D,oDAAgF;AAMhF,MAAqB,aAAc,SAAQ,oCAAsB;IAUvD,KAAK,CAAC,QAAQ,CAAC,IAAkB;QACvC,MAAM,EAAE,cAAc,GAAG,GAAG,EAAE,GAAE,CAAC,EAAE,GAAG,IAAI,IAAI,EAAE,CAAA;QAChD,MAAM,MAAM,GAAG,IAAI,YAAM,CAAC;YACxB,UAAU,EAAE,IAAA,iBAAY,EACtB,IAAI,CAAC,OAAO,CAAC,gBAAgB,CAAC,EAC9B,IAAI,CAAC,aAAa,CACnB;SACF,CAAC,CAAA;QACF,MAAM,MAAM,GAAG,MAAM,IAAA,mBAAY,EAC/B,2BAA2B,EAC3B,cAAc,EACd,GAAG,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,CAC7B,CAAA;QACD,OAAO,EAAE,MAAM,EAAE,MAAM,EAAE,CAAA;IAC3B,CAAC;IAED,KAAK,CAAC,KAAK,CAAC,IAAkB;QAC5B,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE;YAChB,IAAI,CAAC,MAAM,GAAG,IAAI,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE;gBAC1C,IAAI,CAAC,MAAM,GAAG,SAAS,CAAA;gBACvB,MAAM,CAAC,CAAA;YACT,CAAC,CAAC,CAAA;SACH;QACD,OAAO,IAAI,CAAC,MAAM,CAAA;IACpB,CAAC;IAEM,KAAK,CAAC,WAAW,CAAC,IAAkB;QACzC,MAAM,EACJ,MAAM,EAAE,EAAE,UAAU,EAAE,GACvB,GAAG,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;QAC1B,OAAO,MAAM,CAAC,IAAI,CAAC,UAAU,CAAC,CAAA;IAChC,CAAC;IAEM,KAAK,CAAC,WAAW,CAAC,KAAa;;QACpC,MAAM,EACJ,MAAM,EAAE,EAAE,YAAY,EAAE,GACzB,GAAG,MAAM,IAAI,CAAC,KAAK,EAAE,CAAA;QACtB,OAAO,MAAA,YAAY,CAAC,KAAK,CAAC,0CAAE,IAAI,CAAA;IAClC,CAAC;IAEM,KAAK,CAAC,cAAc,CAAC,IAAkB;QAC5C,MAAM,EACJ,MAAM,EAAE,EAAE,YAAY,EAAE,GACzB,GAAG,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;QAC1B,OAAO,IAAA,oBAAY,EAAC,YAAuC,CAAC,CAAA;IAC9D,CAAC;IAEM,WAAW,CAAC,MAAc,EAAE,OAAsB,EAAE;QACzD,MAAM,EAAE,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE,GAAG,MAAM,CAAA;QACtC,MAAM,EACJ,OAAO,GAAG,CAAC,EACX,MAAM,EACN,UAAU,GAAG,CAAC,EACd,cAAc,GAAG,GAAG,EAAE,GAAE,CAAC,GAC1B,GAAG,IAAI,CAAA;QACR,OAAO,IAAA,uBAAgB,EAAU,KAAK,EAAC,QAAQ,EAAC,EAAE;YAChD,cAAc,CAAC,yBAAyB,CAAC,CAAA;YACzC,MAAM,MAAM,GAAG,IAAI,CAAC,OAAO,CAAC,QAAQ,CAAC,CAAA;YACrC,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;YACzC,MAAM,KAAK,GAAG,MAAM,MAAM,CAAC,WAAW,CAAC,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE;gBAC1D,GAAG,IAAI;gBACP,YAAY,EAAE,OAAO,GAAG,UAAU;aACnC,CAAC,CAAA;YAEF,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,KAAK,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;gBACrC,MAAM,IAAI,GAAG,KAAK,CAAC,CAAC,CAAC,CAAA;gBACrB,IAAI,MAAM,EAAE;oBACV,aAAa;oBACb,IAAI,CAAC,MAAM,GAAG,MAAM,CAAA;iBACrB;gBACD,MAAM,QAAQ,GAAG,GAAG,MAAM,IAAI,MAAM,CAAC,OAAO,IAAI,IAAI,CAAC,KAAK,IAAI,IAAI,CAAC,GAAG,EAAE,CAAA;gBACxE,aAAa;gBACb,IAAI,CAAC,OAAO,GAAG,OAAO,CAAA;gBACtB,IAAI,CAAC,QAAQ,GAAG,QAAQ,CAAA;gBACxB,QAAQ,CAAC,IAAI,CAAC;oBACZ,aAAa;oBACb,GAAG,EAAE,CAAC,GAAW,EAAE,EAAE,CAAE,IAAgC,CAAC,GAAG,CAAC;oBAC5D,EAAE,EAAE,GAAG,EAAE,CAAC,QAAQ;oBAClB,aAAa;oBACb,MAAM,EAAE,GAAG,EAAE,CAAC,IAAI;iBACnB,CAAC,CAAA;aACH;YACD,QAAQ,CAAC,QAAQ,EAAE,CAAA;QACrB,CAAC,EAAE,MAAM,CAAC,CAAA;IACZ,CAAC;IAED,uEAAuE;IACvE,KAAK,CAAC,oBAAoB,CAAC,QAAkB;QAC3C,OAAO,EAAE,cAAc,EAAE,CAAC,EAAE,CAAA;IAC9B,CAAC;IAEM,aAAa,KAAU,CAAC;;AArGjC,gCAsGC;AAlGe,0BAAY,GAAG;IAC3B,eAAe;IACf,eAAe;IACf,gBAAgB;CACjB,CAAA"}
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
"use strict";
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
|
-
|
|
3
|
+
const configuration_1 = require("@jbrowse/core/configuration");
|
|
4
4
|
exports.default = (0, configuration_1.ConfigurationSchema)('BigWigAdapter', {
|
|
5
5
|
bigWigLocation: {
|
|
6
6
|
type: 'fileLocation',
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/BigWigAdapter/configSchema.ts"],"names":[],"mappings":";;AAAA
|
|
1
|
+
{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/BigWigAdapter/configSchema.ts"],"names":[],"mappings":";;AAAA,+DAAiE;AAEjE,kBAAe,IAAA,mCAAmB,EAChC,eAAe,EACf;IACE,cAAc,EAAE;QACd,IAAI,EAAE,cAAc;QACpB,YAAY,EAAE;YACZ,GAAG,EAAE,gBAAgB;YACrB,YAAY,EAAE,aAAa;SAC5B;KACF;IACD,MAAM,EAAE;QACN,IAAI,EAAE,QAAQ;QACd,YAAY,EAAE,EAAE;QAChB,WAAW,EAAE,sBAAsB;KACpC;CACF,EACD,EAAE,eAAe,EAAE,IAAI,EAAE,CAC1B,CAAA"}
|
|
@@ -26,20 +26,18 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
|
26
26
|
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
27
27
|
};
|
|
28
28
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
29
|
-
|
|
30
|
-
|
|
31
|
-
exports.default = (
|
|
32
|
-
pluginManager.addAdapterType(
|
|
33
|
-
|
|
34
|
-
|
|
35
|
-
|
|
36
|
-
|
|
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|
-
|
|
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|
-
|
|
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|
-
|
|
40
|
-
|
|
41
|
-
|
|
42
|
-
|
|
43
|
-
});
|
|
44
|
-
});
|
|
29
|
+
const AdapterType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/AdapterType"));
|
|
30
|
+
const configSchema_1 = __importDefault(require("./configSchema"));
|
|
31
|
+
exports.default = (pluginManager) => {
|
|
32
|
+
pluginManager.addAdapterType(() => new AdapterType_1.default({
|
|
33
|
+
name: 'BigWigAdapter',
|
|
34
|
+
configSchema: configSchema_1.default,
|
|
35
|
+
adapterCapabilities: [
|
|
36
|
+
'hasResolution',
|
|
37
|
+
'hasLocalStats',
|
|
38
|
+
'hasGlobalStats',
|
|
39
|
+
],
|
|
40
|
+
getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./BigWigAdapter'))).then(r => r.default),
|
|
41
|
+
}));
|
|
42
|
+
};
|
|
45
43
|
//# sourceMappingURL=index.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BigWigAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AACA,
|
|
1
|
+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BigWigAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AACA,kGAAyE;AACzE,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;QACd,IAAI,EAAE,eAAe;QACrB,YAAY,EAAZ,sBAAY;QACZ,mBAAmB,EAAE;YACnB,eAAe;YACf,eAAe;YACf,gBAAgB;SACjB;QACD,eAAe,EAAE,GAAG,EAAE,CAAC,kDAAO,iBAAiB,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACtE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
|
|
@@ -22,31 +22,14 @@ var __importStar = (this && this.__importStar) || function (mod) {
|
|
|
22
22
|
__setModuleDefault(result, mod);
|
|
23
23
|
return result;
|
|
24
24
|
};
|
|
25
|
-
var __read = (this && this.__read) || function (o, n) {
|
|
26
|
-
var m = typeof Symbol === "function" && o[Symbol.iterator];
|
|
27
|
-
if (!m) return o;
|
|
28
|
-
var i = m.call(o), r, ar = [], e;
|
|
29
|
-
try {
|
|
30
|
-
while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
|
|
31
|
-
}
|
|
32
|
-
catch (error) { e = { error: error }; }
|
|
33
|
-
finally {
|
|
34
|
-
try {
|
|
35
|
-
if (r && !r.done && (m = i["return"])) m.call(i);
|
|
36
|
-
}
|
|
37
|
-
finally { if (e) throw e.error; }
|
|
38
|
-
}
|
|
39
|
-
return ar;
|
|
40
|
-
};
|
|
41
25
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
42
|
-
|
|
43
|
-
|
|
44
|
-
|
|
45
|
-
|
|
46
|
-
|
|
47
|
-
|
|
48
|
-
|
|
49
|
-
return (react_1.default.createElement(material_1.Dialog, { open: true, onClose: function () { return onClose(false); } },
|
|
26
|
+
const react_1 = __importStar(require("react"));
|
|
27
|
+
const material_1 = require("@mui/material");
|
|
28
|
+
const configuration_1 = require("@jbrowse/core/configuration");
|
|
29
|
+
const ConfirmDialog = ({ tracks, onClose, }) => {
|
|
30
|
+
const [val, setVal] = (0, react_1.useState)('MultiWiggle ' + Date.now());
|
|
31
|
+
const allQuant = tracks.every(t => t.type === 'QuantitativeTrack');
|
|
32
|
+
return (react_1.default.createElement(material_1.Dialog, { open: true, onClose: () => onClose(false) },
|
|
50
33
|
react_1.default.createElement(material_1.DialogTitle, null, "Confirm multi-wiggle track create"),
|
|
51
34
|
react_1.default.createElement(material_1.DialogContent, null,
|
|
52
35
|
react_1.default.createElement(material_1.Typography, null,
|
|
@@ -54,15 +37,15 @@ var ConfirmDialog = function (_a) {
|
|
|
54
37
|
? 'Not every track looks like a QuantitativeTrack. This could have unexpected behavior, confirm if it looks ok.'
|
|
55
38
|
: null,
|
|
56
39
|
"Listing:"),
|
|
57
|
-
react_1.default.createElement("ul", null, tracks.map(
|
|
40
|
+
react_1.default.createElement("ul", null, tracks.map(track => (react_1.default.createElement("li", { key: track.trackId },
|
|
58
41
|
(0, configuration_1.readConfObject)(track, 'name'),
|
|
59
42
|
" - ",
|
|
60
|
-
track.type))
|
|
61
|
-
react_1.default.createElement(material_1.TextField, { value: val, onChange:
|
|
43
|
+
track.type)))),
|
|
44
|
+
react_1.default.createElement(material_1.TextField, { value: val, onChange: event => setVal(event.target.value), helperText: "Track name" }),
|
|
62
45
|
react_1.default.createElement(material_1.Typography, null, "Confirm creation of track?")),
|
|
63
46
|
react_1.default.createElement(material_1.DialogActions, null,
|
|
64
|
-
react_1.default.createElement(material_1.Button, { onClick:
|
|
65
|
-
react_1.default.createElement(material_1.Button, { onClick:
|
|
47
|
+
react_1.default.createElement(material_1.Button, { onClick: () => onClose(false), color: "primary" }, "Cancel"),
|
|
48
|
+
react_1.default.createElement(material_1.Button, { onClick: () => onClose(true, { name: val }), color: "primary", variant: "contained", autoFocus: true }, "Submit"))));
|
|
66
49
|
};
|
|
67
50
|
exports.default = ConfirmDialog;
|
|
68
51
|
//# sourceMappingURL=ConfirmDialog.js.map
|
|
@@ -1 +1 @@
|
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{"version":3,"file":"ConfirmDialog.js","sourceRoot":"","sources":["../../src/CreateMultiWiggleExtension/ConfirmDialog.tsx"],"names":[],"mappings":"
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{"version":3,"file":"ConfirmDialog.js","sourceRoot":"","sources":["../../src/CreateMultiWiggleExtension/ConfirmDialog.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuC;AACvC,4CAQsB;AACtB,+DAGoC;AAEpC,MAAM,aAAa,GAAG,CAAC,EACrB,MAAM,EACN,OAAO,GAIR,EAAE,EAAE;IACH,MAAM,CAAC,GAAG,EAAE,MAAM,CAAC,GAAG,IAAA,gBAAQ,EAAC,cAAc,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,CAAA;IAC3D,MAAM,QAAQ,GAAG,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,mBAAmB,CAAC,CAAA;IAClE,OAAO,CACL,8BAAC,iBAAM,IAAC,IAAI,QAAC,OAAO,EAAE,GAAG,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;QACxC,8BAAC,sBAAW,4CAAgD;QAC5D,8BAAC,wBAAa;YACZ,8BAAC,qBAAU;gBACR,CAAC,QAAQ;oBACR,CAAC,CAAC,8GAA8G;oBAChH,CAAC,CAAC,IAAI;2BAEG;YACb,0CACG,MAAM,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE,CAAC,CACnB,sCAAI,GAAG,EAAE,KAAK,CAAC,OAAO;gBACnB,IAAA,8BAAc,EAAC,KAAK,EAAE,MAAM,CAAC;;gBAAK,KAAK,CAAC,IAAI,CAC1C,CACN,CAAC,CACC;YACL,8BAAC,oBAAS,IACR,KAAK,EAAE,GAAG,EACV,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,MAAM,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,EAC7C,UAAU,EAAC,YAAY,GACvB;YACF,8BAAC,qBAAU,qCAAwC,CACrC;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IAAC,OAAO,EAAE,GAAG,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC,EAAE,KAAK,EAAC,SAAS,aAE7C;YACT,8BAAC,iBAAM,IACL,OAAO,EAAE,GAAG,EAAE,CAAC,OAAO,CAAC,IAAI,EAAE,EAAE,IAAI,EAAE,GAAG,EAAE,CAAC,EAC3C,KAAK,EAAC,SAAS,EACf,OAAO,EAAC,WAAW,EACnB,SAAS,mBAGF,CACK,CACT,CACV,CAAA;AACH,CAAC,CAAA;AAED,kBAAe,aAAa,CAAA"}
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{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/CreateMultiWiggleExtension/index.ts"],"names":[],"mappings":"
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