@jbrowse/plugin-wiggle 2.0.0 → 2.1.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BigWigAdapter/BigWigAdapter.d.ts +8 -7
- package/dist/BigWigAdapter/BigWigAdapter.js +73 -169
- package/dist/BigWigAdapter/BigWigAdapter.js.map +1 -1
- package/dist/BigWigAdapter/configSchema.js +6 -1
- package/dist/BigWigAdapter/configSchema.js.map +1 -1
- package/dist/BigWigAdapter/index.d.ts +3 -1
- package/dist/BigWigAdapter/index.js +37 -3
- package/dist/BigWigAdapter/index.js.map +1 -1
- package/dist/CreateMultiWiggleExtension/ConfirmDialog.d.ts +9 -0
- package/dist/CreateMultiWiggleExtension/ConfirmDialog.js +51 -0
- package/dist/CreateMultiWiggleExtension/ConfirmDialog.js.map +1 -0
- package/dist/CreateMultiWiggleExtension/index.d.ts +2 -0
- package/dist/CreateMultiWiggleExtension/index.js +77 -0
- package/dist/CreateMultiWiggleExtension/index.js.map +1 -0
- package/dist/DensityRenderer/DensityRenderer.d.ts +6 -0
- package/dist/DensityRenderer/DensityRenderer.js +14 -0
- package/dist/DensityRenderer/DensityRenderer.js.map +1 -0
- package/dist/DensityRenderer/configSchema.d.ts +2 -0
- package/dist/DensityRenderer/configSchema.js +10 -0
- package/dist/DensityRenderer/configSchema.js.map +1 -0
- package/dist/DensityRenderer/index.d.ts +3 -6
- package/dist/DensityRenderer/index.js +11 -150
- package/dist/DensityRenderer/index.js.map +1 -1
- package/dist/LinePlotRenderer/LinePlotRenderer.d.ts +4 -2
- package/dist/LinePlotRenderer/LinePlotRenderer.js +11 -177
- package/dist/LinePlotRenderer/LinePlotRenderer.js.map +1 -1
- package/dist/LinePlotRenderer/configSchema.d.ts +2 -0
- package/dist/LinePlotRenderer/configSchema.js +16 -0
- package/dist/LinePlotRenderer/configSchema.js.map +1 -0
- package/dist/LinePlotRenderer/index.d.ts +3 -3
- package/dist/LinePlotRenderer/index.js +11 -14
- package/dist/LinePlotRenderer/index.js.map +1 -1
- package/dist/LinearWiggleDisplay/components/SetColorDialog.d.ts +6 -2
- package/dist/LinearWiggleDisplay/components/SetColorDialog.js +21 -46
- package/dist/LinearWiggleDisplay/components/SetColorDialog.js.map +1 -1
- package/dist/LinearWiggleDisplay/components/SetMinMaxDialog.js +16 -32
- package/dist/LinearWiggleDisplay/components/SetMinMaxDialog.js.map +1 -1
- package/dist/LinearWiggleDisplay/components/Tooltip.d.ts +6 -11
- package/dist/LinearWiggleDisplay/components/Tooltip.js +21 -143
- package/dist/LinearWiggleDisplay/components/Tooltip.js.map +1 -1
- package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js +15 -26
- package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js.map +1 -1
- package/dist/LinearWiggleDisplay/components/YScaleBar.js +6 -18
- package/dist/LinearWiggleDisplay/components/YScaleBar.js.map +1 -1
- package/dist/LinearWiggleDisplay/index.d.ts +7 -3
- package/dist/LinearWiggleDisplay/index.js +23 -8
- package/dist/LinearWiggleDisplay/index.js.map +1 -1
- package/dist/LinearWiggleDisplay/models/configSchema.js +6 -6
- package/dist/LinearWiggleDisplay/models/configSchema.js.map +1 -1
- package/dist/LinearWiggleDisplay/models/model.d.ts +24 -5
- package/dist/LinearWiggleDisplay/models/model.js +392 -512
- package/dist/LinearWiggleDisplay/models/model.js.map +1 -1
- package/dist/MultiDensityRenderer/MultiDensityRenderer.d.ts +7 -0
- package/dist/MultiDensityRenderer/MultiDensityRenderer.js +42 -0
- package/dist/MultiDensityRenderer/MultiDensityRenderer.js.map +1 -0
- package/dist/MultiDensityRenderer/configSchema.d.ts +2 -0
- package/dist/MultiDensityRenderer/configSchema.js +10 -0
- package/dist/MultiDensityRenderer/configSchema.js.map +1 -0
- package/dist/MultiDensityRenderer/index.d.ts +3 -0
- package/dist/MultiDensityRenderer/index.js +17 -0
- package/dist/MultiDensityRenderer/index.js.map +1 -0
- package/dist/MultiLineRenderer/MultiLineRenderer.d.ts +7 -0
- package/dist/MultiLineRenderer/MultiLineRenderer.js +31 -0
- package/dist/MultiLineRenderer/MultiLineRenderer.js.map +1 -0
- package/dist/MultiLineRenderer/configSchema.d.ts +2 -0
- package/dist/MultiLineRenderer/configSchema.js +23 -0
- package/dist/MultiLineRenderer/configSchema.js.map +1 -0
- package/dist/MultiLineRenderer/index.d.ts +3 -0
- package/dist/MultiLineRenderer/index.js +17 -0
- package/dist/MultiLineRenderer/index.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +10 -0
- package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js +191 -0
- package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/components/SetMinMaxDialog.d.ts +11 -0
- package/dist/MultiLinearWiggleDisplay/components/SetMinMaxDialog.js +75 -0
- package/dist/MultiLinearWiggleDisplay/components/SetMinMaxDialog.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/components/Tooltip.d.ts +25 -0
- package/dist/MultiLinearWiggleDisplay/components/Tooltip.js +49 -0
- package/dist/MultiLinearWiggleDisplay/components/Tooltip.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +13 -0
- package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js +105 -0
- package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/components/YScaleBar.d.ts +7 -0
- package/dist/MultiLinearWiggleDisplay/components/YScaleBar.js +14 -0
- package/dist/MultiLinearWiggleDisplay/components/YScaleBar.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/components/util.d.ts +10 -0
- package/dist/MultiLinearWiggleDisplay/components/util.js +36 -0
- package/dist/MultiLinearWiggleDisplay/components/util.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/index.d.ts +3 -0
- package/dist/MultiLinearWiggleDisplay/index.js +23 -0
- package/dist/MultiLinearWiggleDisplay/index.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/models/configSchema.d.ts +2 -0
- package/dist/MultiLinearWiggleDisplay/models/configSchema.js +77 -0
- package/dist/MultiLinearWiggleDisplay/models/configSchema.js.map +1 -0
- package/dist/MultiLinearWiggleDisplay/models/model.d.ts +339 -0
- package/dist/MultiLinearWiggleDisplay/models/model.js +598 -0
- package/dist/MultiLinearWiggleDisplay/models/model.js.map +1 -0
- package/dist/MultiQuantitativeTrack/index.d.ts +3 -0
- package/dist/MultiQuantitativeTrack/index.js +19 -0
- package/dist/MultiQuantitativeTrack/index.js.map +1 -0
- package/dist/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +7 -0
- package/dist/MultiRowLineRenderer/MultiRowLineRenderer.js +39 -0
- package/dist/MultiRowLineRenderer/MultiRowLineRenderer.js.map +1 -0
- package/dist/MultiRowLineRenderer/configSchema.d.ts +2 -0
- package/dist/MultiRowLineRenderer/configSchema.js +23 -0
- package/dist/MultiRowLineRenderer/configSchema.js.map +1 -0
- package/dist/MultiRowLineRenderer/index.d.ts +3 -0
- package/dist/MultiRowLineRenderer/index.js +17 -0
- package/dist/MultiRowLineRenderer/index.js.map +1 -0
- package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +7 -0
- package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +68 -0
- package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js.map +1 -0
- package/dist/MultiRowXYPlotRenderer/configSchema.d.ts +2 -0
- package/dist/MultiRowXYPlotRenderer/configSchema.js +31 -0
- package/dist/MultiRowXYPlotRenderer/configSchema.js.map +1 -0
- package/dist/MultiRowXYPlotRenderer/index.d.ts +3 -0
- package/dist/MultiRowXYPlotRenderer/index.js +17 -0
- package/dist/MultiRowXYPlotRenderer/index.js.map +1 -0
- package/dist/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +29 -0
- package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js +92 -0
- package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js.map +1 -0
- package/dist/MultiWiggleAdapter/configSchema.d.ts +2 -0
- package/dist/MultiWiggleAdapter/configSchema.js +14 -0
- package/dist/MultiWiggleAdapter/configSchema.js.map +1 -0
- package/dist/MultiWiggleAdapter/index.d.ts +3 -0
- package/dist/MultiWiggleAdapter/index.js +43 -0
- package/dist/MultiWiggleAdapter/index.js.map +1 -0
- package/dist/MultiWiggleAddTrackWidget/AddTrackWorkflow.d.ts +5 -0
- package/dist/MultiWiggleAddTrackWidget/AddTrackWorkflow.js +113 -0
- package/dist/MultiWiggleAddTrackWidget/AddTrackWorkflow.js.map +1 -0
- package/dist/MultiWiggleAddTrackWidget/index.d.ts +3 -0
- package/dist/MultiWiggleAddTrackWidget/index.js +17 -0
- package/dist/MultiWiggleAddTrackWidget/index.js.map +1 -0
- package/dist/MultiWiggleRendering.d.ts +21 -0
- package/dist/MultiWiggleRendering.js +100 -0
- package/dist/MultiWiggleRendering.js.map +1 -0
- package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +7 -0
- package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.js +57 -0
- package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.js.map +1 -0
- package/dist/MultiXYPlotRenderer/configSchema.d.ts +2 -0
- package/dist/MultiXYPlotRenderer/configSchema.js +31 -0
- package/dist/MultiXYPlotRenderer/configSchema.js.map +1 -0
- package/dist/MultiXYPlotRenderer/index.d.ts +3 -0
- package/dist/MultiXYPlotRenderer/index.js +17 -0
- package/dist/MultiXYPlotRenderer/index.js.map +1 -0
- package/dist/QuantitativeTrack/index.d.ts +3 -0
- package/dist/QuantitativeTrack/index.js +19 -0
- package/dist/QuantitativeTrack/index.js.map +1 -0
- package/dist/Tooltip.d.ts +20 -0
- package/dist/Tooltip.js +96 -0
- package/dist/Tooltip.js.map +1 -0
- package/dist/WiggleBaseRenderer.d.ts +9 -10
- package/dist/WiggleBaseRenderer.js +34 -112
- package/dist/WiggleBaseRenderer.js.map +1 -1
- package/dist/WiggleRPC/rpcMethods.d.ts +17 -1
- package/dist/WiggleRPC/rpcMethods.js +108 -176
- package/dist/WiggleRPC/rpcMethods.js.map +1 -1
- package/dist/WiggleRendering.d.ts +1 -1
- package/dist/WiggleRendering.js +20 -73
- package/dist/WiggleRendering.js.map +1 -1
- package/dist/XYPlotRenderer/XYPlotRenderer.d.ts +4 -1
- package/dist/XYPlotRenderer/XYPlotRenderer.js +23 -223
- package/dist/XYPlotRenderer/XYPlotRenderer.js.map +1 -1
- package/dist/XYPlotRenderer/configSchema.d.ts +2 -0
- package/dist/XYPlotRenderer/configSchema.js +31 -0
- package/dist/XYPlotRenderer/configSchema.js.map +1 -0
- package/dist/XYPlotRenderer/index.d.ts +7 -3
- package/dist/XYPlotRenderer/index.js +15 -25
- package/dist/XYPlotRenderer/index.js.map +1 -1
- package/dist/configSchema.js +2 -7
- package/dist/configSchema.js.map +1 -1
- package/dist/drawxy.d.ts +50 -0
- package/dist/drawxy.js +292 -0
- package/dist/drawxy.js.map +1 -0
- package/dist/index.d.ts +79 -21
- package/dist/index.js +73 -124
- package/dist/index.js.map +1 -1
- package/dist/util.d.ts +34 -1
- package/dist/util.js +128 -33
- package/dist/util.js.map +1 -1
- package/esm/BigWigAdapter/BigWigAdapter.d.ts +8 -7
- package/esm/BigWigAdapter/BigWigAdapter.js +37 -18
- package/esm/BigWigAdapter/BigWigAdapter.js.map +1 -1
- package/esm/BigWigAdapter/configSchema.js +5 -0
- package/esm/BigWigAdapter/configSchema.js.map +1 -1
- package/esm/BigWigAdapter/index.d.ts +3 -1
- package/esm/BigWigAdapter/index.js +14 -1
- package/esm/BigWigAdapter/index.js.map +1 -1
- package/esm/CreateMultiWiggleExtension/ConfirmDialog.d.ts +9 -0
- package/esm/CreateMultiWiggleExtension/ConfirmDialog.js +26 -0
- package/esm/CreateMultiWiggleExtension/ConfirmDialog.js.map +1 -0
- package/esm/CreateMultiWiggleExtension/index.d.ts +2 -0
- package/esm/CreateMultiWiggleExtension/index.js +51 -0
- package/esm/CreateMultiWiggleExtension/index.js.map +1 -0
- package/esm/DensityRenderer/DensityRenderer.d.ts +6 -0
- package/esm/DensityRenderer/DensityRenderer.js +8 -0
- package/esm/DensityRenderer/DensityRenderer.js.map +1 -0
- package/esm/DensityRenderer/configSchema.d.ts +2 -0
- package/esm/DensityRenderer/configSchema.js +5 -0
- package/esm/DensityRenderer/configSchema.js.map +1 -0
- package/esm/DensityRenderer/index.d.ts +3 -6
- package/esm/DensityRenderer/index.js +11 -38
- package/esm/DensityRenderer/index.js.map +1 -1
- package/esm/LinePlotRenderer/LinePlotRenderer.d.ts +4 -2
- package/esm/LinePlotRenderer/LinePlotRenderer.js +7 -65
- package/esm/LinePlotRenderer/LinePlotRenderer.js.map +1 -1
- package/esm/LinePlotRenderer/configSchema.d.ts +2 -0
- package/esm/LinePlotRenderer/configSchema.js +11 -0
- package/esm/LinePlotRenderer/configSchema.js.map +1 -0
- package/esm/LinePlotRenderer/index.d.ts +3 -3
- package/esm/LinePlotRenderer/index.js +11 -11
- package/esm/LinePlotRenderer/index.js.map +1 -1
- package/esm/LinearWiggleDisplay/components/SetColorDialog.d.ts +6 -2
- package/esm/LinearWiggleDisplay/components/SetColorDialog.js +9 -16
- package/esm/LinearWiggleDisplay/components/SetColorDialog.js.map +1 -1
- package/esm/LinearWiggleDisplay/components/Tooltip.d.ts +6 -11
- package/esm/LinearWiggleDisplay/components/Tooltip.js +3 -76
- package/esm/LinearWiggleDisplay/components/Tooltip.js.map +1 -1
- package/esm/LinearWiggleDisplay/index.d.ts +7 -3
- package/esm/LinearWiggleDisplay/index.js +20 -3
- package/esm/LinearWiggleDisplay/index.js.map +1 -1
- package/esm/LinearWiggleDisplay/models/model.d.ts +24 -5
- package/esm/LinearWiggleDisplay/models/model.js +87 -133
- package/esm/LinearWiggleDisplay/models/model.js.map +1 -1
- package/esm/MultiDensityRenderer/MultiDensityRenderer.d.ts +7 -0
- package/esm/MultiDensityRenderer/MultiDensityRenderer.js +36 -0
- package/esm/MultiDensityRenderer/MultiDensityRenderer.js.map +1 -0
- package/esm/MultiDensityRenderer/configSchema.d.ts +2 -0
- package/esm/MultiDensityRenderer/configSchema.js +5 -0
- package/esm/MultiDensityRenderer/configSchema.js.map +1 -0
- package/esm/MultiDensityRenderer/index.d.ts +3 -0
- package/esm/MultiDensityRenderer/index.js +12 -0
- package/esm/MultiDensityRenderer/index.js.map +1 -0
- package/esm/MultiLineRenderer/MultiLineRenderer.d.ts +7 -0
- package/esm/MultiLineRenderer/MultiLineRenderer.js +25 -0
- package/esm/MultiLineRenderer/MultiLineRenderer.js.map +1 -0
- package/esm/MultiLineRenderer/configSchema.d.ts +2 -0
- package/esm/MultiLineRenderer/configSchema.js +18 -0
- package/esm/MultiLineRenderer/configSchema.js.map +1 -0
- package/esm/MultiLineRenderer/index.d.ts +3 -0
- package/esm/MultiLineRenderer/index.js +12 -0
- package/esm/MultiLineRenderer/index.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +10 -0
- package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js +162 -0
- package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/components/SetMinMaxDialog.d.ts +11 -0
- package/esm/MultiLinearWiggleDisplay/components/SetMinMaxDialog.js +46 -0
- package/esm/MultiLinearWiggleDisplay/components/SetMinMaxDialog.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/components/Tooltip.d.ts +25 -0
- package/esm/MultiLinearWiggleDisplay/components/Tooltip.js +43 -0
- package/esm/MultiLinearWiggleDisplay/components/Tooltip.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +13 -0
- package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js +99 -0
- package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/components/YScaleBar.d.ts +7 -0
- package/esm/MultiLinearWiggleDisplay/components/YScaleBar.js +9 -0
- package/esm/MultiLinearWiggleDisplay/components/YScaleBar.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/components/util.d.ts +10 -0
- package/esm/MultiLinearWiggleDisplay/components/util.js +31 -0
- package/esm/MultiLinearWiggleDisplay/components/util.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/index.d.ts +3 -0
- package/esm/MultiLinearWiggleDisplay/index.js +18 -0
- package/esm/MultiLinearWiggleDisplay/index.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/models/configSchema.d.ts +2 -0
- package/esm/MultiLinearWiggleDisplay/models/configSchema.js +74 -0
- package/esm/MultiLinearWiggleDisplay/models/configSchema.js.map +1 -0
- package/esm/MultiLinearWiggleDisplay/models/model.d.ts +339 -0
- package/esm/MultiLinearWiggleDisplay/models/model.js +570 -0
- package/esm/MultiLinearWiggleDisplay/models/model.js.map +1 -0
- package/esm/MultiQuantitativeTrack/index.d.ts +3 -0
- package/esm/MultiQuantitativeTrack/index.js +14 -0
- package/esm/MultiQuantitativeTrack/index.js.map +1 -0
- package/esm/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +7 -0
- package/esm/MultiRowLineRenderer/MultiRowLineRenderer.js +33 -0
- package/esm/MultiRowLineRenderer/MultiRowLineRenderer.js.map +1 -0
- package/esm/MultiRowLineRenderer/configSchema.d.ts +2 -0
- package/esm/MultiRowLineRenderer/configSchema.js +18 -0
- package/esm/MultiRowLineRenderer/configSchema.js.map +1 -0
- package/esm/MultiRowLineRenderer/index.d.ts +3 -0
- package/esm/MultiRowLineRenderer/index.js +12 -0
- package/esm/MultiRowLineRenderer/index.js.map +1 -0
- package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +7 -0
- package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +39 -0
- package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js.map +1 -0
- package/esm/MultiRowXYPlotRenderer/configSchema.d.ts +2 -0
- package/esm/MultiRowXYPlotRenderer/configSchema.js +26 -0
- package/esm/MultiRowXYPlotRenderer/configSchema.js.map +1 -0
- package/esm/MultiRowXYPlotRenderer/index.d.ts +3 -0
- package/esm/MultiRowXYPlotRenderer/index.js +12 -0
- package/esm/MultiRowXYPlotRenderer/index.js.map +1 -0
- package/esm/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +29 -0
- package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js +89 -0
- package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js.map +1 -0
- package/esm/MultiWiggleAdapter/configSchema.d.ts +2 -0
- package/esm/MultiWiggleAdapter/configSchema.js +12 -0
- package/esm/MultiWiggleAdapter/configSchema.js.map +1 -0
- package/esm/MultiWiggleAdapter/index.d.ts +3 -0
- package/esm/MultiWiggleAdapter/index.js +15 -0
- package/esm/MultiWiggleAdapter/index.js.map +1 -0
- package/esm/MultiWiggleAddTrackWidget/AddTrackWorkflow.d.ts +5 -0
- package/esm/MultiWiggleAddTrackWidget/AddTrackWorkflow.js +87 -0
- package/esm/MultiWiggleAddTrackWidget/AddTrackWorkflow.js.map +1 -0
- package/esm/MultiWiggleAddTrackWidget/index.d.ts +3 -0
- package/esm/MultiWiggleAddTrackWidget/index.js +12 -0
- package/esm/MultiWiggleAddTrackWidget/index.js.map +1 -0
- package/esm/MultiWiggleRendering.d.ts +21 -0
- package/esm/MultiWiggleRendering.js +75 -0
- package/esm/MultiWiggleRendering.js.map +1 -0
- package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +7 -0
- package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.js +28 -0
- package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.js.map +1 -0
- package/esm/MultiXYPlotRenderer/configSchema.d.ts +2 -0
- package/esm/MultiXYPlotRenderer/configSchema.js +26 -0
- package/esm/MultiXYPlotRenderer/configSchema.js.map +1 -0
- package/esm/MultiXYPlotRenderer/index.d.ts +3 -0
- package/esm/MultiXYPlotRenderer/index.js +12 -0
- package/esm/MultiXYPlotRenderer/index.js.map +1 -0
- package/esm/QuantitativeTrack/index.d.ts +3 -0
- package/esm/QuantitativeTrack/index.js +14 -0
- package/esm/QuantitativeTrack/index.js.map +1 -0
- package/esm/Tooltip.d.ts +20 -0
- package/esm/Tooltip.js +71 -0
- package/esm/Tooltip.js.map +1 -0
- package/esm/WiggleBaseRenderer.d.ts +9 -10
- package/esm/WiggleBaseRenderer.js +9 -6
- package/esm/WiggleBaseRenderer.js.map +1 -1
- package/esm/WiggleRPC/rpcMethods.d.ts +17 -1
- package/esm/WiggleRPC/rpcMethods.js +49 -7
- package/esm/WiggleRPC/rpcMethods.js.map +1 -1
- package/esm/WiggleRendering.d.ts +1 -1
- package/esm/WiggleRendering.js +4 -8
- package/esm/WiggleRendering.js.map +1 -1
- package/esm/XYPlotRenderer/XYPlotRenderer.d.ts +4 -1
- package/esm/XYPlotRenderer/XYPlotRenderer.js +16 -99
- package/esm/XYPlotRenderer/XYPlotRenderer.js.map +1 -1
- package/esm/XYPlotRenderer/configSchema.d.ts +2 -0
- package/esm/XYPlotRenderer/configSchema.js +26 -0
- package/esm/XYPlotRenderer/configSchema.js.map +1 -0
- package/esm/XYPlotRenderer/index.d.ts +7 -3
- package/esm/XYPlotRenderer/index.js +12 -22
- package/esm/XYPlotRenderer/index.js.map +1 -1
- package/esm/configSchema.js +0 -5
- package/esm/configSchema.js.map +1 -1
- package/esm/drawxy.d.ts +50 -0
- package/esm/drawxy.js +286 -0
- package/esm/drawxy.js.map +1 -0
- package/esm/index.d.ts +79 -21
- package/esm/index.js +49 -74
- package/esm/index.js.map +1 -1
- package/esm/util.d.ts +34 -1
- package/esm/util.js +108 -0
- package/esm/util.js.map +1 -1
- package/package.json +13 -8
- package/src/BigWigAdapter/BigWigAdapter.ts +53 -35
- package/src/BigWigAdapter/__snapshots__/BigWigAdapter.test.ts.snap +10 -10
- package/src/BigWigAdapter/configSchema.ts +5 -0
- package/src/BigWigAdapter/index.ts +19 -1
- package/src/CreateMultiWiggleExtension/ConfirmDialog.tsx +66 -0
- package/src/CreateMultiWiggleExtension/index.ts +57 -0
- package/src/DensityRenderer/DensityRenderer.test.js +8 -2
- package/src/DensityRenderer/DensityRenderer.ts +14 -0
- package/src/DensityRenderer/__snapshots__/DensityRenderer.test.js.snap +8 -0
- package/src/DensityRenderer/configSchema.ts +11 -0
- package/src/DensityRenderer/index.ts +14 -53
- package/src/LinePlotRenderer/LinePlotRenderer.ts +19 -0
- package/src/LinePlotRenderer/{index.js → configSchema.ts} +3 -4
- package/src/LinePlotRenderer/index.ts +16 -0
- package/src/LinearWiggleDisplay/components/SetColorDialog.tsx +17 -19
- package/src/LinearWiggleDisplay/components/Tooltip.tsx +6 -122
- package/src/LinearWiggleDisplay/index.ts +24 -3
- package/src/LinearWiggleDisplay/models/model.tsx +98 -174
- package/src/MultiDensityRenderer/MultiDensityRenderer.ts +39 -0
- package/src/MultiDensityRenderer/configSchema.ts +10 -0
- package/src/MultiDensityRenderer/index.ts +16 -0
- package/src/MultiLineRenderer/MultiLineRenderer.ts +29 -0
- package/src/MultiLineRenderer/configSchema.ts +24 -0
- package/src/MultiLineRenderer/index.ts +17 -0
- package/src/MultiLinearWiggleDisplay/components/SetColorDialog.tsx +322 -0
- package/src/MultiLinearWiggleDisplay/components/SetMinMaxDialog.tsx +113 -0
- package/src/MultiLinearWiggleDisplay/components/Tooltip.tsx +76 -0
- package/src/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.tsx +261 -0
- package/src/MultiLinearWiggleDisplay/components/YScaleBar.tsx +25 -0
- package/src/MultiLinearWiggleDisplay/components/declare.d.ts +1 -0
- package/src/MultiLinearWiggleDisplay/components/util.test.ts +69 -0
- package/src/MultiLinearWiggleDisplay/components/util.ts +33 -0
- package/src/MultiLinearWiggleDisplay/index.ts +20 -0
- package/src/MultiLinearWiggleDisplay/models/configSchema.ts +94 -0
- package/src/MultiLinearWiggleDisplay/models/model.tsx +721 -0
- package/src/MultiQuantitativeTrack/index.ts +26 -0
- package/src/MultiRowLineRenderer/MultiRowLineRenderer.ts +36 -0
- package/src/MultiRowLineRenderer/configSchema.ts +25 -0
- package/src/MultiRowLineRenderer/index.ts +16 -0
- package/src/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.ts +43 -0
- package/src/MultiRowXYPlotRenderer/configSchema.ts +33 -0
- package/src/MultiRowXYPlotRenderer/index.ts +16 -0
- package/src/MultiWiggleAdapter/MultiWiggleAdapter.ts +124 -0
- package/src/MultiWiggleAdapter/configSchema.ts +16 -0
- package/src/MultiWiggleAdapter/index.ts +20 -0
- package/src/MultiWiggleAdapter/test_data/volvox.bw +0 -0
- package/src/MultiWiggleAddTrackWidget/AddTrackWorkflow.tsx +130 -0
- package/src/MultiWiggleAddTrackWidget/index.ts +17 -0
- package/src/MultiWiggleRendering.tsx +125 -0
- package/src/MultiXYPlotRenderer/MultiXYPlotRenderer.ts +32 -0
- package/src/MultiXYPlotRenderer/configSchema.ts +31 -0
- package/src/MultiXYPlotRenderer/index.ts +17 -0
- package/src/QuantitativeTrack/index.ts +26 -0
- package/src/Tooltip.tsx +123 -0
- package/src/WiggleBaseRenderer.tsx +17 -10
- package/src/WiggleRPC/rpcMethods.ts +68 -17
- package/src/WiggleRendering.tsx +12 -18
- package/src/XYPlotRenderer/XYPlotRenderer.test.js +3 -1
- package/src/XYPlotRenderer/XYPlotRenderer.ts +19 -171
- package/src/XYPlotRenderer/__snapshots__/XYPlotRenderer.test.js.snap +8 -0
- package/src/XYPlotRenderer/configSchema.ts +32 -0
- package/src/XYPlotRenderer/index.ts +16 -27
- package/src/__snapshots__/WiggleRendering.test.js.snap +0 -2
- package/src/configSchema.ts +0 -5
- package/src/declare.d.ts +0 -1
- package/src/drawxy.ts +387 -0
- package/src/index.ts +75 -129
- package/src/util.ts +174 -0
- package/src/LinePlotRenderer/LinePlotRenderer.js +0 -91
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{"version":3,"file":"WiggleBaseRenderer.js","sourceRoot":"","sources":["../src/WiggleBaseRenderer.tsx"],"names":[],"mappings":"
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{"version":3,"file":"WiggleBaseRenderer.js","sourceRoot":"","sources":["../src/WiggleBaseRenderer.tsx"],"names":[],"mappings":";;;;;AAAA,4HAO0E;AAC1E,6CAAoE;AAmCpE,MAA8B,kBAAmB,SAAQ,6BAAmB;IAA5E;;QACE,gBAAW,GAAG,IAAI,CAAA;IAgDpB,CAAC;IA9CC,KAAK,CAAC,MAAM,CAAC,WAAmC;QAC9C,MAAM,QAAQ,GAAG,MAAM,IAAI,CAAC,WAAW,CAAC,WAAW,CAAC,CAAA;QACpD,MAAM,EAAE,MAAM,EAAE,OAAO,EAAE,OAAO,EAAE,GAAG,WAAW,CAAA;QAChD,MAAM,CAAC,MAAM,CAAC,GAAG,OAAO,CAAA;QACxB,MAAM,KAAK,GAAG,CAAC,MAAM,CAAC,GAAG,GAAG,MAAM,CAAC,KAAK,CAAC,GAAG,OAAO,CAAA;QAEnD,aAAa;QACb,MAAM,EAAE,eAAe,EAAE,GAAG,IAAI,EAAE,GAAG,MAAM,IAAA,6BAAsB,EAC/D,KAAK,EACL,MAAM,EACN,WAAW,EACX,GAAG,CAAC,EAAE,CACJ,IAAI,CAAC,IAAI,CAAC,GAAG,EAAE;YACb,GAAG,WAAW;YACd,QAAQ;SACT,CAAC,CACL,CAAA;QAED,MAAM,OAAO,GAAG,MAAM,KAAK,CAAC,MAAM,CAAC;YACjC,GAAG,WAAW;YACd,GAAG,IAAI;YACP,QAAQ;YACR,MAAM;YACN,KAAK;SACN,CAAC,CAAA;QAEF,OAAO;YACL,GAAG,OAAO;YACV,GAAG,IAAI;YACP,QAAQ,EAAE,CAAC,eAAe;gBACxB,CAAC,CAAC,IAAI,GAAG,CAAC,eAAe,CAAC,GAAG,CAAC,CAAC,CAAU,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC;gBAC3D,CAAC,CAAC,OAAO,CAAC,QAAQ,CAAyB;YAC7C,MAAM;YACN,KAAK;YACL,uBAAuB,EAAE,IAAI;SAC9B,CAAA;IACH,CAAC;CAUF;AAjDD,qCAiDC"}
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|
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|
|
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|
-
});
|
|
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|
-
};
|
|
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|
-
WiggleGetMultiRegionStats.prototype.execute = function (args, rpcDriverClassName) {
|
|
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|
-
return __awaiter(this, void 0, void 0, function () {
|
|
168
|
-
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|
|
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|
-
return __generator(this, function (_a) {
|
|
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|
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|
|
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|
-
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|
|
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|
-
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|
|
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|
-
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|
|
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|
-
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|
|
175
|
-
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|
|
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|
-
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|
|
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|
-
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|
|
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|
-
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|
|
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|
-
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|
|
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|
-
}
|
|
181
|
-
throw new Error('Data adapter not found');
|
|
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|
-
}
|
|
183
|
-
});
|
|
45
|
+
async deserializeArguments(args, rpcDriverClassName) {
|
|
46
|
+
const l = await super.deserializeArguments(args, rpcDriverClassName);
|
|
47
|
+
return {
|
|
48
|
+
...l,
|
|
49
|
+
filters: args.filters
|
|
50
|
+
? new serializableFilterChain_1.default({
|
|
51
|
+
filters: args.filters,
|
|
52
|
+
})
|
|
53
|
+
: undefined,
|
|
54
|
+
};
|
|
55
|
+
}
|
|
56
|
+
async serializeArguments(args, rpcDriverClassName) {
|
|
57
|
+
var _a, _b, _c;
|
|
58
|
+
const pm = this.pluginManager;
|
|
59
|
+
const assemblyManager = (_b = (_a = pm.rootModel) === null || _a === void 0 ? void 0 : _a.session) === null || _b === void 0 ? void 0 : _b.assemblyManager;
|
|
60
|
+
if (!assemblyManager) {
|
|
61
|
+
return args;
|
|
62
|
+
}
|
|
63
|
+
const renamedArgs = await (0, util_1.renameRegionsIfNeeded)(assemblyManager, {
|
|
64
|
+
...args,
|
|
65
|
+
filters: (_c = args.filters) === null || _c === void 0 ? void 0 : _c.toJSON().filters,
|
|
184
66
|
});
|
|
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|
-
|
|
186
|
-
|
|
187
|
-
|
|
67
|
+
return super.serializeArguments(renamedArgs, rpcDriverClassName);
|
|
68
|
+
}
|
|
69
|
+
async execute(args, rpcDriverClassName) {
|
|
70
|
+
const pm = this.pluginManager;
|
|
71
|
+
const deserializedArgs = await this.deserializeArguments(args, rpcDriverClassName);
|
|
72
|
+
const { regions, adapterConfig, sessionId } = deserializedArgs;
|
|
73
|
+
const { dataAdapter } = await (0, dataAdapterCache_1.getAdapter)(pm, sessionId, adapterConfig);
|
|
74
|
+
if (dataAdapter instanceof BaseAdapter_1.BaseFeatureDataAdapter) {
|
|
75
|
+
return dataAdapter.getMultiRegionStats(regions, deserializedArgs);
|
|
76
|
+
}
|
|
77
|
+
throw new Error('Data adapter not found');
|
|
78
|
+
}
|
|
79
|
+
}
|
|
188
80
|
exports.WiggleGetMultiRegionStats = WiggleGetMultiRegionStats;
|
|
81
|
+
class MultiWiggleGetSources extends RpcMethodType_1.default {
|
|
82
|
+
constructor() {
|
|
83
|
+
super(...arguments);
|
|
84
|
+
this.name = 'MultiWiggleGetSources';
|
|
85
|
+
}
|
|
86
|
+
// eslint-disable-next-line @typescript-eslint/no-explicit-any
|
|
87
|
+
async deserializeArguments(args, rpcDriverClassName) {
|
|
88
|
+
const l = await super.deserializeArguments(args, rpcDriverClassName);
|
|
89
|
+
return {
|
|
90
|
+
...l,
|
|
91
|
+
filters: args.filters
|
|
92
|
+
? new serializableFilterChain_1.default({
|
|
93
|
+
filters: args.filters,
|
|
94
|
+
})
|
|
95
|
+
: undefined,
|
|
96
|
+
};
|
|
97
|
+
}
|
|
98
|
+
async serializeArguments(args, rpcDriverClassName) {
|
|
99
|
+
var _a, _b, _c;
|
|
100
|
+
const pm = this.pluginManager;
|
|
101
|
+
const assemblyManager = (_b = (_a = pm.rootModel) === null || _a === void 0 ? void 0 : _a.session) === null || _b === void 0 ? void 0 : _b.assemblyManager;
|
|
102
|
+
if (!assemblyManager) {
|
|
103
|
+
return args;
|
|
104
|
+
}
|
|
105
|
+
const renamedArgs = await (0, util_1.renameRegionsIfNeeded)(assemblyManager, {
|
|
106
|
+
...args,
|
|
107
|
+
filters: (_c = args.filters) === null || _c === void 0 ? void 0 : _c.toJSON().filters,
|
|
108
|
+
});
|
|
109
|
+
return super.serializeArguments(renamedArgs, rpcDriverClassName);
|
|
110
|
+
}
|
|
111
|
+
async execute(args, rpcDriverClassName) {
|
|
112
|
+
const pm = this.pluginManager;
|
|
113
|
+
const deserializedArgs = await this.deserializeArguments(args, rpcDriverClassName);
|
|
114
|
+
const { regions, adapterConfig, sessionId } = deserializedArgs;
|
|
115
|
+
const { dataAdapter } = await (0, dataAdapterCache_1.getAdapter)(pm, sessionId, adapterConfig);
|
|
116
|
+
// @ts-ignore
|
|
117
|
+
return dataAdapter.getSources(regions, deserializedArgs);
|
|
118
|
+
}
|
|
119
|
+
}
|
|
120
|
+
exports.MultiWiggleGetSources = MultiWiggleGetSources;
|
|
189
121
|
//# sourceMappingURL=rpcMethods.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"rpcMethods.js","sourceRoot":"","sources":["../../src/WiggleRPC/rpcMethods.ts"],"names":[],"mappings":"
|
|
1
|
+
{"version":3,"file":"rpcMethods.js","sourceRoot":"","sources":["../../src/WiggleRPC/rpcMethods.ts"],"names":[],"mappings":";;;;;;AAAA,sGAA6E;AAC7E,yIAAgH;AAChH,mFAAyE;AAEzE,6CAAkE;AAElE,yEAAgF;AAGhF,MAAa,oBAAqB,SAAQ,uBAAa;IAAvD;;QACE,SAAI,GAAG,sBAAsB,CAAA;IAmC/B,CAAC;IAjCC,8DAA8D;IAC9D,KAAK,CAAC,oBAAoB,CAAC,IAAS,EAAE,kBAA0B;QAC9D,MAAM,CAAC,GAAG,MAAM,KAAK,CAAC,oBAAoB,CAAC,IAAI,EAAE,kBAAkB,CAAC,CAAA;QACpE,OAAO;YACL,GAAG,CAAC;YACJ,OAAO,EAAE,IAAI,CAAC,OAAO;gBACnB,CAAC,CAAC,IAAI,iCAAuB,CAAC;oBAC1B,OAAO,EAAE,IAAI,CAAC,OAAO;iBACtB,CAAC;gBACJ,CAAC,CAAC,SAAS;SACd,CAAA;IACH,CAAC;IAED,KAAK,CAAC,OAAO,CACX,IAKC,EACD,kBAA0B;QAE1B,MAAM,EAAE,GAAG,IAAI,CAAC,aAAa,CAAA;QAC7B,MAAM,gBAAgB,GAAG,MAAM,IAAI,CAAC,oBAAoB,CACtD,IAAI,EACJ,kBAAkB,CACnB,CAAA;QACD,MAAM,EAAE,aAAa,EAAE,SAAS,EAAE,GAAG,gBAAgB,CAAA;QACrD,MAAM,EAAE,WAAW,EAAE,GAAG,MAAM,IAAA,6BAAU,EAAC,EAAE,EAAE,SAAS,EAAE,aAAa,CAAC,CAAA;QAEtE,aAAa;QACb,OAAO,WAAW,CAAC,cAAc,CAAC,gBAAgB,CAAC,CAAA;IACrD,CAAC;CACF;AApCD,oDAoCC;AAED,MAAa,yBAA0B,SAAQ,uBAAa;IAA5D;;QACE,SAAI,GAAG,2BAA2B,CAAA;IAyDpC,CAAC;IAvDC,8DAA8D;IAC9D,KAAK,CAAC,oBAAoB,CAAC,IAAS,EAAE,kBAA0B;QAC9D,MAAM,CAAC,GAAG,MAAM,KAAK,CAAC,oBAAoB,CAAC,IAAI,EAAE,kBAAkB,CAAC,CAAA;QACpE,OAAO;YACL,GAAG,CAAC;YACJ,OAAO,EAAE,IAAI,CAAC,OAAO;gBACnB,CAAC,CAAC,IAAI,iCAAuB,CAAC;oBAC1B,OAAO,EAAE,IAAI,CAAC,OAAO;iBACtB,CAAC;gBACJ,CAAC,CAAC,SAAS;SACd,CAAA;IACH,CAAC;IAED,KAAK,CAAC,kBAAkB,CACtB,IAAsE,EACtE,kBAA0B;;QAE1B,MAAM,EAAE,GAAG,IAAI,CAAC,aAAa,CAAA;QAC7B,MAAM,eAAe,GAAG,MAAA,MAAA,EAAE,CAAC,SAAS,0CAAE,OAAO,0CAAE,eAAe,CAAA;QAC9D,IAAI,CAAC,eAAe,EAAE;YACpB,OAAO,IAAI,CAAA;SACZ;QAED,MAAM,WAAW,GAAG,MAAM,IAAA,4BAAqB,EAAC,eAAe,EAAE;YAC/D,GAAG,IAAI;YACP,OAAO,EAAE,MAAA,IAAI,CAAC,OAAO,0CAAE,MAAM,GAAG,OAAO;SACxC,CAAC,CAAA;QAEF,OAAO,KAAK,CAAC,kBAAkB,CAAC,WAAW,EAAE,kBAAkB,CAAC,CAAA;IAClE,CAAC;IAED,KAAK,CAAC,OAAO,CACX,IAOC,EACD,kBAA0B;QAE1B,MAAM,EAAE,GAAG,IAAI,CAAC,aAAa,CAAA;QAC7B,MAAM,gBAAgB,GAAG,MAAM,IAAI,CAAC,oBAAoB,CACtD,IAAI,EACJ,kBAAkB,CACnB,CAAA;QACD,MAAM,EAAE,OAAO,EAAE,aAAa,EAAE,SAAS,EAAE,GAAG,gBAAgB,CAAA;QAC9D,MAAM,EAAE,WAAW,EAAE,GAAG,MAAM,IAAA,6BAAU,EAAC,EAAE,EAAE,SAAS,EAAE,aAAa,CAAC,CAAA;QAEtE,IAAI,WAAW,YAAY,oCAAsB,EAAE;YACjD,OAAO,WAAW,CAAC,mBAAmB,CAAC,OAAO,EAAE,gBAAgB,CAAC,CAAA;SAClE;QACD,MAAM,IAAI,KAAK,CAAC,wBAAwB,CAAC,CAAA;IAC3C,CAAC;CACF;AA1DD,8DA0DC;AAED,MAAa,qBAAsB,SAAQ,uBAAa;IAAxD;;QACE,SAAI,GAAG,uBAAuB,CAAA;IAuDhC,CAAC;IArDC,8DAA8D;IAC9D,KAAK,CAAC,oBAAoB,CAAC,IAAS,EAAE,kBAA0B;QAC9D,MAAM,CAAC,GAAG,MAAM,KAAK,CAAC,oBAAoB,CAAC,IAAI,EAAE,kBAAkB,CAAC,CAAA;QACpE,OAAO;YACL,GAAG,CAAC;YACJ,OAAO,EAAE,IAAI,CAAC,OAAO;gBACnB,CAAC,CAAC,IAAI,iCAAuB,CAAC;oBAC1B,OAAO,EAAE,IAAI,CAAC,OAAO;iBACtB,CAAC;gBACJ,CAAC,CAAC,SAAS;SACd,CAAA;IACH,CAAC;IAED,KAAK,CAAC,kBAAkB,CACtB,IAAsE,EACtE,kBAA0B;;QAE1B,MAAM,EAAE,GAAG,IAAI,CAAC,aAAa,CAAA;QAC7B,MAAM,eAAe,GAAG,MAAA,MAAA,EAAE,CAAC,SAAS,0CAAE,OAAO,0CAAE,eAAe,CAAA;QAC9D,IAAI,CAAC,eAAe,EAAE;YACpB,OAAO,IAAI,CAAA;SACZ;QAED,MAAM,WAAW,GAAG,MAAM,IAAA,4BAAqB,EAAC,eAAe,EAAE;YAC/D,GAAG,IAAI;YACP,OAAO,EAAE,MAAA,IAAI,CAAC,OAAO,0CAAE,MAAM,GAAG,OAAO;SACxC,CAAC,CAAA;QAEF,OAAO,KAAK,CAAC,kBAAkB,CAAC,WAAW,EAAE,kBAAkB,CAAC,CAAA;IAClE,CAAC;IAED,KAAK,CAAC,OAAO,CACX,IAOC,EACD,kBAA0B;QAE1B,MAAM,EAAE,GAAG,IAAI,CAAC,aAAa,CAAA;QAC7B,MAAM,gBAAgB,GAAG,MAAM,IAAI,CAAC,oBAAoB,CACtD,IAAI,EACJ,kBAAkB,CACnB,CAAA;QACD,MAAM,EAAE,OAAO,EAAE,aAAa,EAAE,SAAS,EAAE,GAAG,gBAAgB,CAAA;QAC9D,MAAM,EAAE,WAAW,EAAE,GAAG,MAAM,IAAA,6BAAU,EAAC,EAAE,EAAE,SAAS,EAAE,aAAa,CAAC,CAAA;QAEtE,aAAa;QACb,OAAO,WAAW,CAAC,UAAU,CAAC,OAAO,EAAE,gBAAgB,CAAC,CAAA;IAC1D,CAAC;CACF;AAxDD,sDAwDC"}
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
/// <reference types="react" />
|
|
2
2
|
import { Region } from '@jbrowse/core/util/types';
|
|
3
|
-
import { Feature } from '@jbrowse/core/util
|
|
3
|
+
import { Feature } from '@jbrowse/core/util';
|
|
4
4
|
declare function WiggleRendering(props: {
|
|
5
5
|
regions: Region[];
|
|
6
6
|
features: Map<string, Feature>;
|
package/dist/WiggleRendering.js
CHANGED
|
@@ -1,15 +1,4 @@
|
|
|
1
1
|
"use strict";
|
|
2
|
-
var __assign = (this && this.__assign) || function () {
|
|
3
|
-
__assign = Object.assign || function(t) {
|
|
4
|
-
for (var s, i = 1, n = arguments.length; i < n; i++) {
|
|
5
|
-
s = arguments[i];
|
|
6
|
-
for (var p in s) if (Object.prototype.hasOwnProperty.call(s, p))
|
|
7
|
-
t[p] = s[p];
|
|
8
|
-
}
|
|
9
|
-
return t;
|
|
10
|
-
};
|
|
11
|
-
return __assign.apply(this, arguments);
|
|
12
|
-
};
|
|
13
2
|
var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
|
|
14
3
|
if (k2 === undefined) k2 = k;
|
|
15
4
|
var desc = Object.getOwnPropertyDescriptor(m, k);
|
|
@@ -33,82 +22,40 @@ var __importStar = (this && this.__importStar) || function (mod) {
|
|
|
33
22
|
__setModuleDefault(result, mod);
|
|
34
23
|
return result;
|
|
35
24
|
};
|
|
36
|
-
var __read = (this && this.__read) || function (o, n) {
|
|
37
|
-
var m = typeof Symbol === "function" && o[Symbol.iterator];
|
|
38
|
-
if (!m) return o;
|
|
39
|
-
var i = m.call(o), r, ar = [], e;
|
|
40
|
-
try {
|
|
41
|
-
while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
|
|
42
|
-
}
|
|
43
|
-
catch (error) { e = { error: error }; }
|
|
44
|
-
finally {
|
|
45
|
-
try {
|
|
46
|
-
if (r && !r.done && (m = i["return"])) m.call(i);
|
|
47
|
-
}
|
|
48
|
-
finally { if (e) throw e.error; }
|
|
49
|
-
}
|
|
50
|
-
return ar;
|
|
51
|
-
};
|
|
52
|
-
var __values = (this && this.__values) || function(o) {
|
|
53
|
-
var s = typeof Symbol === "function" && Symbol.iterator, m = s && o[s], i = 0;
|
|
54
|
-
if (m) return m.call(o);
|
|
55
|
-
if (o && typeof o.length === "number") return {
|
|
56
|
-
next: function () {
|
|
57
|
-
if (o && i >= o.length) o = void 0;
|
|
58
|
-
return { value: o && o[i++], done: !o };
|
|
59
|
-
}
|
|
60
|
-
};
|
|
61
|
-
throw new TypeError(s ? "Object is not iterable." : "Symbol.iterator is not defined.");
|
|
62
|
-
};
|
|
63
25
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
64
|
-
|
|
65
|
-
|
|
66
|
-
|
|
26
|
+
const mobx_react_1 = require("mobx-react");
|
|
27
|
+
const react_1 = __importStar(require("react"));
|
|
28
|
+
const ui_1 = require("@jbrowse/core/ui");
|
|
67
29
|
function WiggleRendering(props) {
|
|
68
|
-
|
|
69
|
-
|
|
70
|
-
|
|
30
|
+
const { regions, features, bpPerPx, width, height, onMouseLeave = () => { }, onMouseMove = () => { }, onFeatureClick = () => { }, } = props;
|
|
31
|
+
const [region] = regions;
|
|
32
|
+
const ref = (0, react_1.useRef)(null);
|
|
71
33
|
function getFeatureUnderMouse(eventClientX) {
|
|
72
|
-
var e_1, _a;
|
|
73
34
|
// calculates feature under mouse
|
|
74
|
-
|
|
35
|
+
let offset = 0;
|
|
75
36
|
if (ref.current) {
|
|
76
37
|
offset = ref.current.getBoundingClientRect().left;
|
|
77
38
|
}
|
|
78
|
-
|
|
79
|
-
|
|
80
|
-
|
|
81
|
-
|
|
82
|
-
|
|
83
|
-
|
|
84
|
-
|
|
85
|
-
|
|
86
|
-
|
|
87
|
-
|
|
88
|
-
}
|
|
89
|
-
}
|
|
90
|
-
}
|
|
91
|
-
catch (e_1_1) { e_1 = { error: e_1_1 }; }
|
|
92
|
-
finally {
|
|
93
|
-
try {
|
|
94
|
-
if (_c && !_c.done && (_a = _b.return)) _a.call(_b);
|
|
39
|
+
const offsetX = eventClientX - offset;
|
|
40
|
+
const px = region.reversed ? width - offsetX : offsetX;
|
|
41
|
+
const clientBp = region.start + bpPerPx * px;
|
|
42
|
+
let featureUnderMouse;
|
|
43
|
+
for (const feature of features.values()) {
|
|
44
|
+
// bpPerPx added to the end to accomodate "reduced features" (one feature per px)
|
|
45
|
+
if (clientBp <= feature.get('end') + bpPerPx &&
|
|
46
|
+
clientBp >= feature.get('start')) {
|
|
47
|
+
featureUnderMouse = feature;
|
|
48
|
+
break;
|
|
95
49
|
}
|
|
96
|
-
finally { if (e_1) throw e_1.error; }
|
|
97
50
|
}
|
|
98
51
|
return featureUnderMouse;
|
|
99
52
|
}
|
|
100
|
-
return (react_1.default.createElement("div", { ref: ref, "data-testid": "wiggle-rendering-test", onMouseMove:
|
|
101
|
-
var featureUnderMouse = getFeatureUnderMouse(event.clientX);
|
|
102
|
-
onMouseMove(event, featureUnderMouse ? featureUnderMouse.id() : undefined);
|
|
103
|
-
}, onClick: function (event) {
|
|
104
|
-
var featureUnderMouse = getFeatureUnderMouse(event.clientX);
|
|
105
|
-
onFeatureClick(event, featureUnderMouse ? featureUnderMouse.id() : undefined);
|
|
106
|
-
}, onMouseLeave: function (event) { return onMouseLeave(event); }, role: "presentation", className: "WiggleRendering", style: {
|
|
53
|
+
return (react_1.default.createElement("div", { ref: ref, "data-testid": "wiggle-rendering-test", onMouseMove: event => { var _a; return onMouseMove(event, (_a = getFeatureUnderMouse(event.clientX)) === null || _a === void 0 ? void 0 : _a.id()); }, onClick: event => { var _a; return onFeatureClick(event, (_a = getFeatureUnderMouse(event.clientX)) === null || _a === void 0 ? void 0 : _a.id()); }, onMouseLeave: event => onMouseLeave(event), style: {
|
|
107
54
|
overflow: 'visible',
|
|
108
55
|
position: 'relative',
|
|
109
|
-
height
|
|
56
|
+
height,
|
|
110
57
|
} },
|
|
111
|
-
react_1.default.createElement(ui_1.PrerenderedCanvas,
|
|
58
|
+
react_1.default.createElement(ui_1.PrerenderedCanvas, { ...props })));
|
|
112
59
|
}
|
|
113
60
|
exports.default = (0, mobx_react_1.observer)(WiggleRendering);
|
|
114
61
|
//# sourceMappingURL=WiggleRendering.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"WiggleRendering.js","sourceRoot":"","sources":["../src/WiggleRendering.tsx"],"names":[],"mappings":"
|
|
1
|
+
{"version":3,"file":"WiggleRendering.js","sourceRoot":"","sources":["../src/WiggleRendering.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;AAAA,2CAAqC;AACrC,+CAAqC;AAIrC,yCAAoD;AAEpD,SAAS,eAAe,CAAC,KAUxB;IACC,MAAM,EACJ,OAAO,EACP,QAAQ,EACR,OAAO,EACP,KAAK,EACL,MAAM,EACN,YAAY,GAAG,GAAG,EAAE,GAAE,CAAC,EACvB,WAAW,GAAG,GAAG,EAAE,GAAE,CAAC,EACtB,cAAc,GAAG,GAAG,EAAE,GAAE,CAAC,GAC1B,GAAG,KAAK,CAAA;IACT,MAAM,CAAC,MAAM,CAAC,GAAG,OAAO,CAAA;IACxB,MAAM,GAAG,GAAG,IAAA,cAAM,EAAiB,IAAI,CAAC,CAAA;IAExC,SAAS,oBAAoB,CAAC,YAAoB;QAChD,iCAAiC;QACjC,IAAI,MAAM,GAAG,CAAC,CAAA;QACd,IAAI,GAAG,CAAC,OAAO,EAAE;YACf,MAAM,GAAG,GAAG,CAAC,OAAO,CAAC,qBAAqB,EAAE,CAAC,IAAI,CAAA;SAClD;QACD,MAAM,OAAO,GAAG,YAAY,GAAG,MAAM,CAAA;QACrC,MAAM,EAAE,GAAG,MAAM,CAAC,QAAQ,CAAC,CAAC,CAAC,KAAK,GAAG,OAAO,CAAC,CAAC,CAAC,OAAO,CAAA;QACtD,MAAM,QAAQ,GAAG,MAAM,CAAC,KAAK,GAAG,OAAO,GAAG,EAAE,CAAA;QAC5C,IAAI,iBAAiB,CAAA;QACrB,KAAK,MAAM,OAAO,IAAI,QAAQ,CAAC,MAAM,EAAE,EAAE;YACvC,iFAAiF;YACjF,IACE,QAAQ,IAAI,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,GAAG,OAAO;gBACxC,QAAQ,IAAI,OAAO,CAAC,GAAG,CAAC,OAAO,CAAC,EAChC;gBACA,iBAAiB,GAAG,OAAO,CAAA;gBAC3B,MAAK;aACN;SACF;QACD,OAAO,iBAAiB,CAAA;IAC1B,CAAC;IACD,OAAO,CACL,uCACE,GAAG,EAAE,GAAG,iBACI,uBAAuB,EACnC,WAAW,EAAE,KAAK,CAAC,EAAE,WACnB,OAAA,WAAW,CAAC,KAAK,EAAE,MAAA,oBAAoB,CAAC,KAAK,CAAC,OAAO,CAAC,0CAAE,EAAE,EAAE,CAAC,CAAA,EAAA,EAE/D,OAAO,EAAE,KAAK,CAAC,EAAE,WACf,OAAA,cAAc,CAAC,KAAK,EAAE,MAAA,oBAAoB,CAAC,KAAK,CAAC,OAAO,CAAC,0CAAE,EAAE,EAAE,CAAC,CAAA,EAAA,EAElE,YAAY,EAAE,KAAK,CAAC,EAAE,CAAC,YAAY,CAAC,KAAK,CAAC,EAC1C,KAAK,EAAE;YACL,QAAQ,EAAE,SAAS;YACnB,QAAQ,EAAE,UAAU;YACpB,MAAM;SACP;QAED,8BAAC,sBAAiB,OAAK,KAAK,GAAI,CAC5B,CACP,CAAA;AACH,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,eAAe,CAAC,CAAA"}
|
|
@@ -1,4 +1,7 @@
|
|
|
1
|
+
import { Feature } from '@jbrowse/core/util';
|
|
1
2
|
import WiggleBaseRenderer, { RenderArgsDeserializedWithFeatures } from '../WiggleBaseRenderer';
|
|
2
3
|
export default class XYPlotRenderer extends WiggleBaseRenderer {
|
|
3
|
-
draw(ctx: CanvasRenderingContext2D, props: RenderArgsDeserializedWithFeatures): Promise<
|
|
4
|
+
draw(ctx: CanvasRenderingContext2D, props: RenderArgsDeserializedWithFeatures): Promise<{
|
|
5
|
+
reducedFeatures: Feature[];
|
|
6
|
+
}>;
|
|
4
7
|
}
|