@jbrowse/plugin-variants 3.7.0 → 4.0.0

package/dist/ChordVariantDisplay/index.js

@@ -1,25 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.default = ChordVariantDisplayF;
-const DisplayType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/DisplayType"));
-const plugin_circular_view_1 = require("@jbrowse/plugin-circular-view");
-const configSchema_1 = __importDefault(require("./models/configSchema"));
-const stateModelFactory_1 = __importDefault(require("./models/stateModelFactory"));
-function ChordVariantDisplayF(pluginManager) {
-    pluginManager.addDisplayType(() => {
-        const configSchema = (0, configSchema_1.default)(pluginManager);
-        const stateModel = (0, stateModelFactory_1.default)(configSchema);
-        return new DisplayType_1.default({
-            name: 'ChordVariantDisplay',
-            displayName: 'Chord variant display',
-            configSchema,
-            stateModel,
-            trackType: 'VariantTrack',
-            viewType: 'CircularView',
-            ReactComponent: plugin_circular_view_1.BaseChordDisplayComponent,
-        });
-    });
-}

package/dist/ChordVariantDisplay/models/configSchema.d.ts

@@ -1,12 +0,0 @@
-import type PluginManager from '@jbrowse/core/PluginManager';
-declare function stateModelFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    renderer: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IAnyModelType, [undefined]>;
-}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    onChordClick: {
-        type: string;
-        description: string;
-        defaultValue: boolean;
-        contextVariable: string[];
-    };
-}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>;
-export default stateModelFactory;

package/dist/ChordVariantDisplay/models/configSchema.js

@@ -1,15 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-const configuration_1 = require("@jbrowse/core/configuration");
-const plugin_circular_view_1 = require("@jbrowse/plugin-circular-view");
-const mobx_state_tree_1 = require("mobx-state-tree");
-function x() { }
-function stateModelFactory(pluginManager) {
-    return (0, configuration_1.ConfigurationSchema)('ChordVariantDisplay', {
-        renderer: mobx_state_tree_1.types.optional(pluginManager.pluggableConfigSchemaType('renderer'), { type: 'StructuralVariantChordRenderer' }),
-    }, {
-        baseConfiguration: plugin_circular_view_1.baseChordDisplayConfig,
-        explicitlyTyped: true,
-    });
-}
-exports.default = stateModelFactory;

package/dist/ChordVariantDisplay/models/stateModelFactory.d.ts

@@ -1,115 +0,0 @@
-import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
-import type { Feature } from '@jbrowse/core/util';
-declare const stateModelFactory: (configSchema: AnyConfigurationSchemaType) => import("mobx-state-tree").IModelType<{
-    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-    type: import("mobx-state-tree").ISimpleType<string>;
-    rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-} & {
-    bezierRadiusRatio: import("mobx-state-tree").IType<number | undefined, number, number>;
-    assemblyName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-    configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-        onChordClick: {
-            type: string;
-            description: string;
-            defaultValue: boolean;
-            contextVariable: string[];
-        };
-    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
-} & {
-    type: import("mobx-state-tree").ISimpleType<"ChordVariantDisplay">;
-    configuration: AnyConfigurationSchemaType;
-}, {
-    rendererTypeName: string;
-    error: unknown;
-    message: string | undefined;
-} & {
-    readonly RenderingComponent: React.FC<{
-        model: {
-            id: string;
-            type: string;
-            rpcDriverName: string | undefined;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            rendererTypeName: string;
-            error: unknown;
-            message: string | undefined;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-            type: import("mobx-state-tree").ISimpleType<string>;
-            rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-        }, {
-            rendererTypeName: string;
-            error: unknown;
-            message: string | undefined;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-        onHorizontalScroll?: () => void;
-        blockState?: Record<string, any>;
-    }>;
-    readonly DisplayBlurb: React.FC<{
-        model: {
-            id: string;
-            type: string;
-            rpcDriverName: string | undefined;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            rendererTypeName: string;
-            error: unknown;
-            message: string | undefined;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-            type: import("mobx-state-tree").ISimpleType<string>;
-            rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-        }, {
-            rendererTypeName: string;
-            error: unknown;
-            message: string | undefined;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    }> | null;
-    readonly adapterConfig: any;
-    readonly parentTrack: any;
-    renderProps(): any;
-    readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
-    readonly DisplayMessageComponent: undefined | React.FC<any>;
-    trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
-    readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
-    regionCannotBeRendered(): null;
-} & {
-    setMessage(arg?: string): void;
-    setError(error?: unknown): void;
-    setRpcDriverName(rpcDriverName: string): void;
-    reload(): void;
-} & {
-    filled: boolean;
-    reactElement: React.ReactElement | undefined;
-    data: undefined;
-    html: string | undefined;
-    message: string;
-    renderingComponent: undefined | import("@jbrowse/core/util").AnyReactComponentType;
-    refNameMap: Record<string, string> | undefined;
-} & {
-    onChordClick(feature: Feature): void;
-} & {
-    readonly blockDefinitions: import("@jbrowse/plugin-circular-view/src/CircularView/slices").Slice[];
-    renderProps(): any;
-    readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType | undefined;
-    readonly selectedFeatureId: string | undefined;
-} & {
-    renderStarted(): void;
-    renderSuccess({ message, data, reactElement, html, renderingComponent, }: {
-        message?: string;
-        data?: any;
-        html?: string;
-        reactElement?: React.ReactElement;
-        renderingComponent?: import("@jbrowse/core/util").AnyReactComponentType;
-    }): void;
-    renderError(error: unknown): void;
-    setRefNameMap(refNameMap: Record<string, string>): void;
-} & {
-    afterAttach(): void;
-} & {
-    renderSvg(opts: import("@jbrowse/plugin-circular-view/src/CircularView/model").ExportSvgOptions & {
-        theme?: import("@mui/material").ThemeOptions;
-    }): Promise<import("react/jsx-runtime").JSX.Element>;
-} & {
-    readonly rendererTypeName: any;
-    renderProps(): Record<string, unknown>;
-}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
-export default stateModelFactory;

package/dist/ChordVariantDisplay/models/stateModelFactory.js

@@ -1,35 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-const configuration_1 = require("@jbrowse/core/configuration");
-const util_1 = require("@jbrowse/core/util");
-const tracks_1 = require("@jbrowse/core/util/tracks");
-const plugin_circular_view_1 = require("@jbrowse/plugin-circular-view");
-const mobx_state_tree_1 = require("mobx-state-tree");
-const stateModelFactory = (configSchema) => {
-    return mobx_state_tree_1.types
-        .compose('ChordVariantDisplay', plugin_circular_view_1.BaseChordDisplayModel, mobx_state_tree_1.types.model({
-        type: mobx_state_tree_1.types.literal('ChordVariantDisplay'),
-        configuration: (0, configuration_1.ConfigurationReference)(configSchema),
-    }))
-        .views(self => ({
-        get rendererTypeName() {
-            return self.configuration.renderer.type;
-        },
-        renderProps() {
-            const view = (0, util_1.getContainingView)(self);
-            return {
-                ...(0, tracks_1.getParentRenderProps)(self),
-                rpcDriverName: self.rpcDriverName,
-                displayModel: self,
-                bezierRadius: view.radiusPx * self.bezierRadiusRatio,
-                radius: view.radiusPx,
-                blockDefinitions: self.blockDefinitions,
-                config: self.configuration.renderer,
-                onChordClick: (arg) => {
-                    self.onChordClick(arg);
-                },
-            };
-        },
-    }));
-};
-exports.default = stateModelFactory;

package/dist/LinearVariantDisplay/configSchema.d.ts

@@ -1,34 +0,0 @@
-import type PluginManager from '@jbrowse/core/PluginManager';
-import type { Instance } from 'mobx-state-tree';
-export default function configSchemaF(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    renderer: import("mobx-state-tree").IAnyModelType;
-}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    maxFeatureScreenDensity: {
-        type: string;
-        description: string;
-        defaultValue: number;
-    };
-    fetchSizeLimit: {
-        type: string;
-        defaultValue: number;
-        description: string;
-    };
-    height: {
-        type: string;
-        defaultValue: number;
-        description: string;
-    };
-    mouseover: {
-        type: string;
-        description: string;
-        defaultValue: string;
-        contextVariable: string[];
-    };
-    jexlFilters: {
-        type: string;
-        description: string;
-        defaultValue: never[];
-    };
-}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>, undefined>>;
-export type LinearVariantDisplayConfigModel = ReturnType<typeof configSchemaF>;
-export type LinearVariantDisplayConfig = Instance<LinearVariantDisplayConfigModel>;

package/dist/LinearVariantDisplay/configSchema.js

@@ -1,12 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.default = configSchemaF;
-const configuration_1 = require("@jbrowse/core/configuration");
-const plugin_linear_genome_view_1 = require("@jbrowse/plugin-linear-genome-view");
-function x() { }
-function configSchemaF(pluginManager) {
-    return (0, configuration_1.ConfigurationSchema)('LinearVariantDisplay', {}, {
-        baseConfiguration: (0, plugin_linear_genome_view_1.linearBasicDisplayConfigSchemaFactory)(pluginManager),
-        explicitlyTyped: true,
-    });
-}

package/dist/LinearVariantDisplay/index.d.ts

@@ -1,2 +0,0 @@
-import type PluginManager from '@jbrowse/core/PluginManager';
-export default function LinearVariantDisplayF(pluginManager: PluginManager): void;

package/dist/LinearVariantDisplay/index.js

@@ -1,24 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.default = LinearVariantDisplayF;
-const DisplayType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/DisplayType"));
-const plugin_linear_genome_view_1 = require("@jbrowse/plugin-linear-genome-view");
-const configSchema_1 = __importDefault(require("./configSchema"));
-const model_1 = __importDefault(require("./model"));
-function LinearVariantDisplayF(pluginManager) {
-    pluginManager.addDisplayType(() => {
-        const configSchema = (0, configSchema_1.default)(pluginManager);
-        return new DisplayType_1.default({
-            name: 'LinearVariantDisplay',
-            displayName: 'Variant display',
-            configSchema,
-            stateModel: (0, model_1.default)(configSchema),
-            trackType: 'VariantTrack',
-            viewType: 'LinearGenomeView',
-            ReactComponent: plugin_linear_genome_view_1.BaseLinearDisplayComponent,
-        });
-    });
-}

package/dist/LinearVariantDisplay/model.d.ts

@@ -1,278 +0,0 @@
-import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
-import type { Feature } from '@jbrowse/core/util';
-import type { Instance } from 'mobx-state-tree';
-export default function stateModelFactory(configSchema: AnyConfigurationSchemaType): import("mobx-state-tree").IModelType<{
-    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-    type: import("mobx-state-tree").ISimpleType<string>;
-    rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-} & {
-    heightPreConfig: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
-} & {
-    userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
-    userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
-} & {
-    blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
-        key: import("mobx-state-tree").ISimpleType<string>;
-        region: import("mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
-        reloadFlag: import("mobx-state-tree").IType<number | undefined, number, number>;
-        isLeftEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
-        isRightEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
-    }, {
-        stopToken: string | undefined;
-        filled: boolean;
-        reactElement: React.ReactElement | undefined;
-        features: Map<string, Feature> | undefined;
-        layout: any;
-        status: string;
-        error: unknown;
-        message: string | undefined;
-        maxHeightReached: boolean;
-        ReactComponent: ({ model, }: {
-            model: {
-                error?: unknown;
-                reload: () => void;
-                message: React.ReactNode;
-                filled?: boolean;
-                status?: string;
-                reactElement?: React.ReactElement;
-            };
-        }) => import("react/jsx-runtime").JSX.Element | undefined;
-        renderProps: any;
-    } & {
-        doReload(): void;
-        afterAttach(): void;
-        setStatus(message: string): void;
-        setLoading(newStopToken: string): void;
-        setMessage(messageText: string): void;
-        setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock").RenderedProps | undefined): void;
-        setError(error: unknown): void;
-        reload(): void;
-        beforeDestroy(): void;
-    }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-        maxFeatureScreenDensity: {
-            type: string;
-            description: string;
-            defaultValue: number;
-        };
-        fetchSizeLimit: {
-            type: string;
-            defaultValue: number;
-            description: string;
-        };
-        height: {
-            type: string;
-            defaultValue: number;
-            description: string;
-        };
-        mouseover: {
-            type: string;
-            description: string;
-            defaultValue: string;
-            contextVariable: string[];
-        };
-        jexlFilters: {
-            type: string;
-            description: string;
-            defaultValue: never[];
-        };
-    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
-} & {
-    type: import("mobx-state-tree").ISimpleType<"LinearBasicDisplay">;
-    trackShowLabels: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<boolean>>;
-    trackShowDescriptions: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<boolean>>;
-    trackDisplayMode: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-    trackMaxHeight: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
-    configuration: AnyConfigurationSchemaType;
-    jexlFilters: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IArrayType<import("mobx-state-tree").ISimpleType<string>>>;
-} & {
-    type: import("mobx-state-tree").ISimpleType<"LinearVariantDisplay">;
-    configuration: AnyConfigurationSchemaType;
-}, {
-    rendererTypeName: string;
-    error: unknown;
-    message: string | undefined;
-} & {
-    readonly RenderingComponent: React.FC<{
-        model: {
-            id: string;
-            type: string;
-            rpcDriverName: string | undefined;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            rendererTypeName: string;
-            error: unknown;
-            message: string | undefined;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-            type: import("mobx-state-tree").ISimpleType<string>;
-            rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-        }, {
-            rendererTypeName: string;
-            error: unknown;
-            message: string | undefined;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-        onHorizontalScroll?: () => void;
-        blockState?: Record<string, any>;
-    }>;
-    readonly DisplayBlurb: React.FC<{
-        model: {
-            id: string;
-            type: string;
-            rpcDriverName: string | undefined;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            rendererTypeName: string;
-            error: unknown;
-            message: string | undefined;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-            type: import("mobx-state-tree").ISimpleType<string>;
-            rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-        }, {
-            rendererTypeName: string;
-            error: unknown;
-            message: string | undefined;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    }> | null;
-    readonly adapterConfig: any;
-    readonly parentTrack: any;
-    renderProps(): any;
-    readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
-    readonly DisplayMessageComponent: undefined | React.FC<any>;
-    trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
-    readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
-    regionCannotBeRendered(): null;
-} & {
-    setMessage(arg?: string): void;
-    setError(error?: unknown): void;
-    setRpcDriverName(rpcDriverName: string): void;
-    reload(): void;
-} & {
-    scrollTop: number;
-} & {
-    readonly height: number;
-} & {
-    setScrollTop(scrollTop: number): void;
-    setHeight(displayHeight: number): number;
-    resizeHeight(distance: number): number;
-} & {
-    featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
-    featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
-    currStatsBpPerPx: number;
-} & {
-    readonly currentBytesRequested: number;
-    readonly currentFeatureScreenDensity: number;
-    readonly maxFeatureScreenDensity: any;
-    readonly featureDensityStatsReady: boolean;
-    readonly maxAllowableBytes: number;
-} & {
-    afterAttach(): void;
-} & {
-    setCurrStatsBpPerPx(n: number): void;
-    setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
-    getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
-    setFeatureDensityStatsP(arg: any): void;
-    setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
-    clearFeatureDensityStats(): void;
-} & {
-    readonly regionTooLarge: boolean;
-    readonly regionTooLargeReason: string;
-} & {
-    readonly statsReadyAndRegionNotTooLarge: boolean;
-    regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
-    regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
-} & {
-    mouseoverExtraInformation: string | undefined;
-    featureIdUnderMouse: undefined | string;
-    contextMenuFeature: undefined | Feature;
-} & {
-    readonly DisplayMessageComponent: undefined | React.FC<any>;
-    readonly blockType: "staticBlocks" | "dynamicBlocks";
-    readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
-} & {
-    readonly renderDelay: number;
-    readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
-    readonly selectedFeatureId: string | undefined;
-    copyInfoToClipboard(feature: Feature): void;
-} & {
-    readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
-    readonly featureUnderMouse: Feature | undefined;
-    readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, [number, number, number, number] | [number, number, number, number, {
-        label?: string;
-        description?: string;
-        refName: string;
-    }]>;
-    getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
-    getFeatureByID(blockKey: string, id: string): ([number, number, number, number] | [number, number, number, number, {
-        label?: string;
-        description?: string;
-        refName: string;
-    }]) | undefined;
-    searchFeatureByID(id: string): ([number, number, number, number] | [number, number, number, number, {
-        label?: string;
-        description?: string;
-        refName: string;
-    }]) | undefined;
-} & {
-    addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
-    deleteBlock(key: string): void;
-    selectFeature(feature: Feature): void;
-    navToFeature(feature: Feature): void;
-    clearFeatureSelection(): void;
-    setFeatureIdUnderMouse(feature?: string): void;
-    setContextMenuFeature(feature?: Feature): void;
-    setMouseoverExtraInformation(extra?: string): void;
-} & {
-    reload(): Promise<void>;
-} & {
-    trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
-    contextMenuItems(): import("@jbrowse/core/ui").MenuItem[];
-    renderProps(): any;
-} & {
-    renderSvg(opts: import("@jbrowse/plugin-linear-genome-view").ExportSvgDisplayOptions): Promise<import("react/jsx-runtime").JSX.Element>;
-    afterAttach(): void;
-} & {
-    readonly activeFilters: any;
-    readonly rendererTypeName: any;
-    readonly showLabels: any;
-    readonly showDescriptions: any;
-    readonly maxHeight: any;
-    readonly displayMode: any;
-} & {
-    readonly rendererConfig: {
-        [x: string]: any;
-    } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-        setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
-            [x: string]: any;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
-                [x: string]: any;
-            } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
-        } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
-    } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>;
-} & {
-    setJexlFilters(f?: string[]): void;
-    toggleShowLabels(): void;
-    toggleShowDescriptions(): void;
-    setDisplayMode(val: string): void;
-    setMaxHeight(val?: number): void;
-} & {
-    renderProps(): {
-        config: {
-            [x: string]: any;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
-                [x: string]: any;
-            } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-                setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
-                    [x: string]: any;
-                } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
-            } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
-        } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>;
-        filters: import("@jbrowse/core/pluggableElementTypes/renderers/util/serializableFilterChain").default;
-    };
-    trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
-} & {
-    selectFeature(feature: Feature): Promise<void>;
-}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
-export type LinearVariantDisplayStateModel = ReturnType<typeof stateModelFactory>;
-export type LinearVariantDisplayModel = Instance<LinearVariantDisplayStateModel>;

package/dist/LinearVariantDisplay/model.js

@@ -1,37 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-exports.default = stateModelFactory;
-const configuration_1 = require("@jbrowse/core/configuration");
-const util_1 = require("@jbrowse/core/util");
-const tracks_1 = require("@jbrowse/core/util/tracks");
-const plugin_linear_genome_view_1 = require("@jbrowse/plugin-linear-genome-view");
-const mobx_state_tree_1 = require("mobx-state-tree");
-function stateModelFactory(configSchema) {
-    return mobx_state_tree_1.types
-        .compose('LinearVariantDisplay', (0, plugin_linear_genome_view_1.linearBasicDisplayModelFactory)(configSchema), mobx_state_tree_1.types.model({
-        type: mobx_state_tree_1.types.literal('LinearVariantDisplay'),
-        configuration: (0, configuration_1.ConfigurationReference)(configSchema),
-    }))
-        .actions(self => ({
-        async selectFeature(feature) {
-            const session = (0, util_1.getSession)(self);
-            if ((0, util_1.isSessionModelWithWidgets)(session)) {
-                const { rpcManager } = session;
-                const sessionId = (0, tracks_1.getRpcSessionId)(self);
-                const track = (0, util_1.getContainingTrack)(self);
-                const view = (0, util_1.getContainingView)(self);
-                const adapterConfig = (0, configuration_1.getConf)(track, 'adapter');
-                const descriptions = await rpcManager.call(sessionId, 'CoreGetMetadata', {
-                    adapterConfig,
-                });
-                session.showWidget(session.addWidget('VariantFeatureWidget', 'variantFeature', {
-                    featureData: feature.toJSON(),
-                    view,
-                    track,
-                    descriptions,
-                }));
-            }
-            session.setSelection(feature);
-        },
-    }));
-}

package/dist/MultiLinearVariantDisplay/components/VariantDisplayComponent.d.ts

@@ -1,5 +0,0 @@
-import type { MultiLinearVariantDisplayModel } from '../model';
-declare const MultiLinearVariantDisplayComponent: (props: {
-    model: MultiLinearVariantDisplayModel;
-}) => import("react/jsx-runtime").JSX.Element;
-export default MultiLinearVariantDisplayComponent;

package/dist/MultiLinearVariantDisplay/components/VariantDisplayComponent.js

@@ -1,29 +0,0 @@
-"use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
-Object.defineProperty(exports, "__esModule", { value: true });
-const jsx_runtime_1 = require("react/jsx-runtime");
-const react_1 = require("react");
-const plugin_linear_genome_view_1 = require("@jbrowse/plugin-linear-genome-view");
-const mobx_react_1 = require("mobx-react");
-const MultiVariantCrosshairs_1 = __importDefault(require("../../shared/components/MultiVariantCrosshairs"));
-const MultiVariantLegendBar_1 = __importDefault(require("../../shared/components/MultiVariantLegendBar"));
-const MultiLinearVariantDisplayComponent = (0, mobx_react_1.observer)(function (props) {
-    const { model } = props;
-    const ref = (0, react_1.useRef)(null);
-    const [mouseY, setMouseY] = (0, react_1.useState)();
-    const [mouseX, setMouseX] = (0, react_1.useState)();
-    return ((0, jsx_runtime_1.jsxs)("div", { ref: ref, onMouseMove: event => {
-            var _a;
-            const rect = (_a = ref.current) === null || _a === void 0 ? void 0 : _a.getBoundingClientRect();
-            const top = (rect === null || rect === void 0 ? void 0 : rect.top) || 0;
-            const left = (rect === null || rect === void 0 ? void 0 : rect.left) || 0;
-            setMouseY(event.clientY - top);
-            setMouseX(event.clientX - left);
-        }, onMouseLeave: () => {
-            setMouseY(undefined);
-            setMouseX(undefined);
-        }, children: [(0, jsx_runtime_1.jsx)(plugin_linear_genome_view_1.BaseLinearDisplayComponent, { ...props }), (0, jsx_runtime_1.jsx)(MultiVariantLegendBar_1.default, { model: model }), mouseX && mouseY ? ((0, jsx_runtime_1.jsx)(MultiVariantCrosshairs_1.default, { mouseX: mouseX, mouseY: mouseY, model: model })) : null] }));
-});
-exports.default = MultiLinearVariantDisplayComponent;