@jbrowse/plugin-linear-genome-view 2.2.0 → 2.2.2

package/esm/LinearGenomeView/components/{OverviewRubberBand.js → OverviewRubberband.js}

@@ -1,47 +1,23 @@
 import React, { useRef, useEffect, useState } from 'react';
-import { Popover, Tooltip, Typography, alpha } from '@mui/material';
+import { Tooltip } from '@mui/material';
 import { makeStyles } from 'tss-react/mui';
 import { getSession, stringify } from '@jbrowse/core/util';
 import { observer } from 'mobx-react';
-import { HEADER_OVERVIEW_HEIGHT } from '..';
-const useStyles = makeStyles()(theme => {
-    const { tertiary, primary } = theme.palette;
-    const background = tertiary
-        ? alpha(tertiary.main, 0.7)
-        : alpha(primary.main, 0.7);
-    return {
-        rubberBand: {
-            height: '100%',
-            background,
-            position: 'absolute',
-            zIndex: 10,
-            textAlign: 'center',
-            overflow: 'hidden',
-        },
-        rubberBandControl: {
-            cursor: 'crosshair',
-            width: '100%',
-            minHeight: 8,
-        },
-        rubberBandText: {
-            color: tertiary ? tertiary.contrastText : primary.contrastText,
-        },
-        popover: {
-            mouseEvents: 'none',
-            cursor: 'crosshair',
-        },
-        paper: {
-            paddingLeft: theme.spacing(1),
-            paddingRight: theme.spacing(1),
-        },
-        guide: {
-            pointerEvents: 'none',
-            height: '100%',
-            width: 1,
-            position: 'absolute',
-            zIndex: 10,
-        },
-    };
+import RubberbandSpan from './RubberbandSpan';
+import { getRelativeX } from './util';
+const useStyles = makeStyles()({
+    rubberbandControl: {
+        cursor: 'crosshair',
+        width: '100%',
+        minHeight: 8,
+    },
+    guide: {
+        pointerEvents: 'none',
+        height: '100%',
+        width: 1,
+        position: 'absolute',
+        zIndex: 10,
+    },
 });
 const HoverTooltip = observer(({ model, open, guideX, overview, }) => {
     var _a;
@@ -58,21 +34,19 @@ const HoverTooltip = observer(({ model, open, guideX, overview, }) => {
                 left: guideX,
             } })));
 });
-function OverviewRubberBand({ model, overview, ControlComponent = React.createElement("div", null), }) {
+function OverviewRubberband({ model, overview, ControlComponent = React.createElement("div", null), }) {
     const { cytobandOffset } = model;
     const [startX, setStartX] = useState();
     const [currentX, setCurrentX] = useState();
     const [guideX, setGuideX] = useState();
     const controlsRef = useRef(null);
-    const rubberBandRef = useRef(null);
     const { classes } = useStyles();
     const mouseDragging = startX !== undefined;
     useEffect(() => {
         function globalMouseMove(event) {
             const ref = controlsRef.current;
             if (ref && mouseDragging) {
-                const relativeX = event.clientX - ref.getBoundingClientRect().left;
-                setCurrentX(relativeX);
+                setCurrentX(getRelativeX(event, ref));
             }
         }
         function globalMouseUp() {
@@ -122,14 +96,10 @@ function OverviewRubberBand({ model, overview, ControlComponent = React.createEl
     function mouseDown(event) {
         event.preventDefault();
         event.stopPropagation();
-        if (controlsRef.current) {
-            setStartX(event.clientX - controlsRef.current.getBoundingClientRect().left);
-        }
+        setStartX(getRelativeX(event, controlsRef.current));
     }
     function mouseMove(event) {
-        if (controlsRef.current) {
-            setGuideX(event.clientX - controlsRef.current.getBoundingClientRect().left);
-        }
+        setGuideX(getRelativeX(event, controlsRef.current));
     }
     function mouseOut() {
         setGuideX(undefined);
@@ -137,7 +107,7 @@ function OverviewRubberBand({ model, overview, ControlComponent = React.createEl
     if (startX === undefined) {
         return (React.createElement("div", { style: { position: 'relative' } },
             guideX !== undefined ? (React.createElement(HoverTooltip, { model: model, open: !mouseDragging, overview: overview, guideX: guideX })) : null,
-            React.createElement("div", { className: classes.rubberBandControl, role: "presentation", ref: controlsRef, onMouseDown: mouseDown, onMouseOut: mouseOut, onMouseMove: mouseMove }, ControlComponent)));
+            React.createElement("div", { className: classes.rubberbandControl, role: "presentation", ref: controlsRef, onMouseDown: mouseDown, onMouseOut: mouseOut, onMouseMove: mouseMove }, ControlComponent)));
     }
     let left = startX || 0;
     let width = 0;
@@ -157,33 +127,8 @@ function OverviewRubberBand({ model, overview, ControlComponent = React.createEl
         }
     }
     return (React.createElement("div", { style: { position: 'relative' } },
-        rubberBandRef.current ? (React.createElement(React.Fragment, null,
-            React.createElement(Popover, { className: classes.popover, classes: {
-                    paper: classes.paper,
-                }, open: true, anchorEl: rubberBandRef.current, anchorOrigin: {
-                    vertical: 'top',
-                    horizontal: 'left',
-                }, transformOrigin: {
-                    vertical: 'bottom',
-                    horizontal: 'right',
-                }, keepMounted: true, disableRestoreFocus: true },
-                React.createElement(Typography, null, leftBpOffset ? stringify(leftBpOffset) : '')),
-            React.createElement(Popover, { className: classes.popover, classes: {
-                    paper: classes.paper,
-                }, open: true, anchorEl: rubberBandRef.current, anchorOrigin: {
-                    vertical: 'top',
-                    horizontal: 'right',
-                }, transformOrigin: {
-                    vertical: 'bottom',
-                    horizontal: 'left',
-                }, keepMounted: true, disableRestoreFocus: true },
-                React.createElement(Typography, null, rightBpOffset ? stringify(rightBpOffset) : '')))) : null,
-        React.createElement("div", { ref: rubberBandRef, className: classes.rubberBand, style: {
-                left,
-                width: Math.abs(width),
-                height: HEADER_OVERVIEW_HEIGHT,
-            } }),
-        React.createElement("div", { "data-testid": "rubberBand_controls", className: classes.rubberBandControl, role: "presentation", ref: controlsRef, onMouseDown: mouseDown, onMouseOut: mouseOut, onMouseMove: mouseMove }, ControlComponent)));
+        leftBpOffset && rightBpOffset ? (React.createElement(RubberbandSpan, { leftBpOffset: leftBpOffset, rightBpOffset: rightBpOffset, width: width, left: left })) : null,
+        React.createElement("div", { "data-testid": "rubberband_controls", className: classes.rubberbandControl, role: "presentation", ref: controlsRef, onMouseDown: mouseDown, onMouseOut: mouseOut, onMouseMove: mouseMove }, ControlComponent)));
 }
-export default observer(OverviewRubberBand);
-//# sourceMappingURL=OverviewRubberBand.js.map
+export default observer(OverviewRubberband);
+//# sourceMappingURL=OverviewRubberband.js.map

package/esm/LinearGenomeView/components/OverviewRubberband.js.map

@@ -0,0 +1 @@
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package/{dist/LinearGenomeView/components/OverviewScaleBar.d.ts → esm/LinearGenomeView/components/OverviewScalebar.d.ts}

@@ -8,7 +8,7 @@ declare const Polygon: ({ model, overview, useOffset, }: {
     overview: Base1DViewModel;
     useOffset?: boolean | undefined;
 }) => JSX.Element | null;
-declare type LGV = LinearGenomeViewModel;
+type LGV = LinearGenomeViewModel;
 declare const Cytobands: ({ overview, block, assembly, }: {
     overview: Base1DViewModel;
     assembly?: ({
@@ -122,10 +122,10 @@ declare const Cytobands: ({ overview, block, assembly, }: {
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
     block: ContentBlock;
 }) => JSX.Element;
-declare function OverviewScaleBar({ model, children, }: {
+declare function OverviewScalebar({ model, children, }: {
     model: LGV;
     children: React.ReactNode;
 }): JSX.Element;
-declare const _default: typeof OverviewScaleBar;
+declare const _default: typeof OverviewScalebar;
 export default _default;
 export { Cytobands, Polygon };

package/esm/LinearGenomeView/components/{OverviewScaleBar.js → OverviewScalebar.js}

@@ -2,49 +2,50 @@ import React from 'react';
 import { Typography, useTheme, alpha } from '@mui/material';
 import { makeStyles } from 'tss-react/mui';
 import { observer } from 'mobx-react';
+// core
 import Base1DView from '@jbrowse/core/util/Base1DViewModel';
 import { getSession, getTickDisplayStr } from '@jbrowse/core/util';
 import { ContentBlock } from '@jbrowse/core/util/blockTypes';
 // locals
 import { HEADER_BAR_HEIGHT, HEADER_OVERVIEW_HEIGHT, } from '..';
 import { chooseGridPitch } from '../util';
-import OverviewRubberBand from './OverviewRubberBand';
+import OverviewRubberband from './OverviewRubberband';
 const wholeSeqSpacer = 2;
 const useStyles = makeStyles()(theme => ({
-    scaleBar: {
+    scalebar: {
         height: HEADER_OVERVIEW_HEIGHT,
     },
-    scaleBarBorder: {
+    scalebarBorder: {
         border: '1px solid',
     },
-    scaleBarContig: {
+    scalebarContig: {
         backgroundColor: theme.palette.background.default,
         position: 'absolute',
         top: 0,
         height: HEADER_OVERVIEW_HEIGHT,
     },
-    scaleBarContigForward: {
+    scalebarContigForward: {
         backgroundImage: `url("data:image/svg+xml,%3Csvg xmlns='http://www.w3.org/2000/svg' viewBox='0 0 15 9'%3E%3Cpath d='M-.1 0L6 4.5L-.1 9' fill='none' stroke='%23ddd'/%3E%3C/svg%3E")`,
         backgroundRepeat: 'repeat',
     },
-    scaleBarContigReverse: {
+    scalebarContigReverse: {
         backgroundImage: `url("data:image/svg+xml,%3Csvg xmlns='http://www.w3.org/2000/svg' viewBox='0 0 15 9'%3E%3Cpath d='M6 0L0 4.5L6 9' fill='none' stroke='%23ddd'/%3E%3C/svg%3E")`,
         backgroundRepeat: 'repeat',
     },
-    scaleBarRefName: {
+    scalebarRefName: {
         position: 'absolute',
         fontWeight: 'bold',
         pointerEvents: 'none',
         zIndex: 100,
     },
-    scaleBarLabel: {
+    scalebarLabel: {
         height: HEADER_OVERVIEW_HEIGHT,
         position: 'absolute',
         display: 'flex',
         justifyContent: 'center',
         pointerEvents: 'none',
     },
-    scaleBarVisibleRegion: {
+    scalebarVisibleRegion: {
         position: 'absolute',
         height: HEADER_OVERVIEW_HEIGHT,
         pointerEvents: 'none',
@@ -202,18 +203,18 @@ const OverviewBox = observer(({ scale, model, block, overview, }) => {
         React.createElement(Typography, { style: {
                 left: block.offsetPx + 3,
                 color: canDisplayCytobands ? 'black' : refNameColor,
-            }, className: classes.scaleBarRefName }, refName),
-        React.createElement("div", { className: cx(classes.scaleBarContig, canDisplayCytobands
+            }, className: classes.scalebarRefName }, refName),
+        React.createElement("div", { className: cx(classes.scalebarContig, canDisplayCytobands
                 ? undefined
                 : reversed
-                    ? classes.scaleBarContigReverse
-                    : classes.scaleBarContigForward, !canDisplayCytobands ? classes.scaleBarBorder : undefined), style: {
+                    ? classes.scalebarContigReverse
+                    : classes.scalebarContigForward, !canDisplayCytobands ? classes.scalebarBorder : undefined), style: {
                 left: block.offsetPx + cytobandOffset,
                 width: block.widthPx,
                 borderColor: refNameColor,
             } },
             !canDisplayCytobands
-                ? tickLabels.map((tickLabel, labelIdx) => (React.createElement(Typography, { key: `${JSON.stringify(block)}-${tickLabel}-${labelIdx}`, className: classes.scaleBarLabel, variant: "body2", style: {
+                ? tickLabels.map((tickLabel, labelIdx) => (React.createElement(Typography, { key: `${JSON.stringify(block)}-${tickLabel}-${labelIdx}`, className: classes.scalebarLabel, variant: "body2", style: {
                         left: ((labelIdx + 1) * majorPitch) / scale,
                         pointerEvents: 'none',
                         color: refNameColor,
@@ -222,14 +223,14 @@ const OverviewBox = observer(({ scale, model, block, overview, }) => {
             canDisplayCytobands ? (React.createElement("svg", { style: { width: '100%' } },
                 React.createElement(Cytobands, { overview: overview, assembly: assembly, block: block }))) : null)));
 });
-const ScaleBar = observer(({ model, scale, overview, }) => {
+const Scalebar = observer(({ model, scale, overview, }) => {
     const { classes } = useStyles();
     const theme = useTheme();
     const { dynamicBlocks, showCytobands, cytobandOffset } = model;
     const visibleRegions = dynamicBlocks.contentBlocks;
     const overviewVisibleRegions = overview.dynamicBlocks;
     const { tertiary, primary } = theme.palette;
-    const scaleBarColor = tertiary ? tertiary.light : primary.light;
+    const scalebarColor = tertiary ? tertiary.light : primary.light;
     if (!visibleRegions.length) {
         return null;
     }
@@ -243,17 +244,17 @@ const ScaleBar = observer(({ model, scale, overview, }) => {
         ...last,
         coord: last.reversed ? last.start : last.end,
     }) || 0;
-    const color = showCytobands ? '#f00' : scaleBarColor;
+    const color = showCytobands ? '#f00' : scalebarColor;
     const transparency = showCytobands ? 0.1 : 0.3;
-    return (React.createElement("div", { className: classes.scaleBar },
-        React.createElement("div", { className: classes.scaleBarVisibleRegion, style: {
+    return (React.createElement("div", { className: classes.scalebar },
+        React.createElement("div", { className: classes.scalebarVisibleRegion, style: {
                 width: lastOverviewPx - firstOverviewPx,
                 left: firstOverviewPx + cytobandOffset,
                 background: alpha(color, transparency),
                 borderColor: color,
             } }),
         overviewVisibleRegions.map((block, idx) => {
-            return !(block instanceof ContentBlock) ? (React.createElement("div", { key: `${JSON.stringify(block)}-${idx}`, className: classes.scaleBarContig, style: {
+            return !(block instanceof ContentBlock) ? (React.createElement("div", { key: `${JSON.stringify(block)}-${idx}`, className: classes.scalebarContig, style: {
                     width: block.widthPx,
                     left: block.offsetPx,
                     backgroundColor: '#999',
@@ -261,7 +262,7 @@ const ScaleBar = observer(({ model, scale, overview, }) => {
                 } })) : (React.createElement(OverviewBox, { scale: scale, block: block, model: model, overview: overview, key: `${JSON.stringify(block)}-${idx}` }));
         })));
 });
-function OverviewScaleBar({ model, children, }) {
+function OverviewScalebar({ model, children, }) {
     const { classes } = useStyles();
     const { totalBp, width, cytobandOffset, displayedRegions } = model;
     const overview = Base1DView.create({
@@ -274,12 +275,12 @@ function OverviewScaleBar({ model, children, }) {
     overview.showAllRegions();
     const scale = totalBp / (modWidth - (displayedRegions.length - 1) * wholeSeqSpacer);
     return (React.createElement("div", null,
-        React.createElement(OverviewRubberBand, { model: model, overview: overview, ControlComponent: React.createElement(ScaleBar, { model: model, overview: overview, scale: scale }) }),
+        React.createElement(OverviewRubberband, { model: model, overview: overview, ControlComponent: React.createElement(Scalebar, { model: model, overview: overview, scale: scale }) }),
         React.createElement("div", { className: classes.overview },
             React.createElement("svg", { height: HEADER_BAR_HEIGHT, className: classes.overviewSvg },
                 React.createElement(Polygon, { model: model, overview: overview })),
             children)));
 }
-export default observer(OverviewScaleBar);
+export default observer(OverviewScalebar);
 export { Cytobands, Polygon };
-//# sourceMappingURL=OverviewScaleBar.js.map
+//# sourceMappingURL=OverviewScalebar.js.map

package/esm/LinearGenomeView/components/OverviewScalebar.js.map

@@ -0,0 +1 @@
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package/esm/LinearGenomeView/components/RefNameAutocomplete.js

@@ -89,7 +89,7 @@ function RefNameAutocomplete({ model, onSelect, assemblyName, style, fetchResult
     }, [assemblyName, fetchResults, debouncedSearch, session, model]);
     const inputBoxVal = coarseVisibleLocStrings || value || '';
     // heuristic, text width + icon width
-    // + 45 accomodates help icon and search icon
+    // + 45 accommodates help icon and search icon
     const width = Math.min(Math.max(measureText(inputBoxVal, 16) + 45, minWidth), 550);
     // notes on implementation:
     // The selectOnFocus setting helps highlight the field when clicked

package/esm/LinearGenomeView/components/RefNameAutocomplete.js.map

@@ -1 +1 @@
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package/esm/LinearGenomeView/components/{RubberBand.d.ts → Rubberband.d.ts}

@@ -1,9 +1,9 @@
 import React from 'react';
 import { LinearGenomeViewModel } from '..';
-declare type LGV = LinearGenomeViewModel;
-declare function RubberBand({ model, ControlComponent, }: {
+type LGV = LinearGenomeViewModel;
+declare function Rubberband({ model, ControlComponent, }: {
     model: LGV;
     ControlComponent?: React.ReactElement;
 }): JSX.Element;
-declare const _default: typeof RubberBand;
+declare const _default: typeof Rubberband;
 export default _default;

package/esm/LinearGenomeView/components/Rubberband.js

@@ -0,0 +1,29 @@
+import React, { useRef } from 'react';
+import { observer } from 'mobx-react';
+import { makeStyles } from 'tss-react/mui';
+import { Menu } from '@jbrowse/core/ui';
+// locals
+import VerticalGuide from './VerticalGuide';
+import RubberbandSpan from './RubberbandSpan';
+import { useRangeSelect } from './hooks';
+const useStyles = makeStyles()({
+    rubberbandControl: {
+        cursor: 'crosshair',
+        width: '100%',
+        minHeight: 8,
+    },
+});
+function Rubberband({ model, ControlComponent = React.createElement("div", null), }) {
+    const ref = useRef(null);
+    const { classes } = useStyles();
+    const { guideX, rubberbandOn, leftBpOffset, rightBpOffset, numOfBpSelected, width, left, anchorPosition, handleMenuItemClick, open, handleClose, mouseMove, mouseDown, mouseOut, } = useRangeSelect(ref, model);
+    return (React.createElement(React.Fragment, null,
+        guideX !== undefined ? (React.createElement(VerticalGuide, { model: model, coordX: guideX })) : rubberbandOn ? (React.createElement(RubberbandSpan, { leftBpOffset: leftBpOffset, rightBpOffset: rightBpOffset, numOfBpSelected: numOfBpSelected, width: width, left: left })) : null,
+        anchorPosition ? (React.createElement(Menu, { anchorReference: "anchorPosition", anchorPosition: {
+                left: anchorPosition.clientX,
+                top: anchorPosition.clientY,
+            }, onMenuItemClick: handleMenuItemClick, open: open, onClose: handleClose, menuItems: model.rubberBandMenuItems() })) : null,
+        React.createElement("div", { "data-testid": "rubberband_controls", className: classes.rubberbandControl, ref: ref, onMouseDown: mouseDown, onMouseMove: mouseMove, onMouseOut: mouseOut }, ControlComponent)));
+}
+export default observer(Rubberband);
+//# sourceMappingURL=Rubberband.js.map

package/esm/LinearGenomeView/components/Rubberband.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"Rubberband.js","sourceRoot":"","sources":["../../../src/LinearGenomeView/components/Rubberband.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,MAAM,EAAE,MAAM,OAAO,CAAA;AACrC,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,IAAI,EAAE,MAAM,kBAAkB,CAAA;AAEvC,SAAS;AACT,OAAO,aAAa,MAAM,iBAAiB,CAAA;AAC3C,OAAO,cAAc,MAAM,kBAAkB,CAAA;AAC7C,OAAO,EAAE,cAAc,EAAE,MAAM,SAAS,CAAA;AAKxC,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC;IAC7B,iBAAiB,EAAE;QACjB,MAAM,EAAE,WAAW;QACnB,KAAK,EAAE,MAAM;QACb,SAAS,EAAE,CAAC;KACb;CACF,CAAC,CAAA;AAEF,SAAS,UAAU,CAAC,EAClB,KAAK,EACL,gBAAgB,GAAG,gCAAO,GAI3B;IACC,MAAM,GAAG,GAAG,MAAM,CAAiB,IAAI,CAAC,CAAA;IACxC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAE/B,MAAM,EACJ,MAAM,EACN,YAAY,EACZ,YAAY,EACZ,aAAa,EACb,eAAe,EACf,KAAK,EACL,IAAI,EACJ,cAAc,EACd,mBAAmB,EACnB,IAAI,EACJ,WAAW,EACX,SAAS,EACT,SAAS,EACT,QAAQ,GACT,GAAG,cAAc,CAAC,GAAG,EAAE,KAAK,CAAC,CAAA;IAE9B,OAAO,CACL;QACG,MAAM,KAAK,SAAS,CAAC,CAAC,CAAC,CACtB,oBAAC,aAAa,IAAC,KAAK,EAAE,KAAK,EAAE,MAAM,EAAE,MAAM,GAAI,CAChD,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,CACjB,oBAAC,cAAc,IACb,YAAY,EAAE,YAAY,EAC1B,aAAa,EAAE,aAAa,EAC5B,eAAe,EAAE,eAAe,EAChC,KAAK,EAAE,KAAK,EACZ,IAAI,EAAE,IAAI,GACV,CACH,CAAC,CAAC,CAAC,IAAI;QACP,cAAc,CAAC,CAAC,CAAC,CAChB,oBAAC,IAAI,IACH,eAAe,EAAC,gBAAgB,EAChC,cAAc,EAAE;gBACd,IAAI,EAAE,cAAc,CAAC,OAAO;gBAC5B,GAAG,EAAE,cAAc,CAAC,OAAO;aAC5B,EACD,eAAe,EAAE,mBAAmB,EACpC,IAAI,EAAE,IAAI,EACV,OAAO,EAAE,WAAW,EACpB,SAAS,EAAE,KAAK,CAAC,mBAAmB,EAAE,GACtC,CACH,CAAC,CAAC,CAAC,IAAI;QACR,4CACc,qBAAqB,EACjC,SAAS,EAAE,OAAO,CAAC,iBAAiB,EACpC,GAAG,EAAE,GAAG,EACR,WAAW,EAAE,SAAS,EACtB,WAAW,EAAE,SAAS,EACtB,UAAU,EAAE,QAAQ,IAEnB,gBAAgB,CACb,CACL,CACJ,CAAA;AACH,CAAC;AAED,eAAe,QAAQ,CAAC,UAAU,CAAC,CAAA"}

package/esm/LinearGenomeView/components/RubberbandSpan.d.ts

@@ -0,0 +1,14 @@
+/// <reference types="react" />
+interface Offset {
+    coord: number;
+    refName?: string;
+    oob?: boolean;
+}
+declare function RubberbandSpan({ leftBpOffset, rightBpOffset, numOfBpSelected, left, width, }: {
+    leftBpOffset: Offset;
+    rightBpOffset: Offset;
+    numOfBpSelected?: number;
+    left: number;
+    width: number;
+}): JSX.Element;
+export default RubberbandSpan;

package/esm/LinearGenomeView/components/RubberbandSpan.js

@@ -0,0 +1,65 @@
+import React, { useRef } from 'react';
+import { makeStyles } from 'tss-react/mui';
+import { Popover, Typography, alpha } from '@mui/material';
+import { stringify, toLocale } from '@jbrowse/core/util';
+const useStyles = makeStyles()(theme => {
+    const { primary, tertiary } = theme.palette;
+    const background = tertiary
+        ? alpha(tertiary.main, 0.7)
+        : alpha(primary.main, 0.7);
+    return {
+        rubberband: {
+            height: '100%',
+            background,
+            position: 'absolute',
+            zIndex: 10,
+            textAlign: 'center',
+            overflow: 'hidden',
+        },
+        rubberbandControl: {
+            cursor: 'crosshair',
+            width: '100%',
+            minHeight: 8,
+        },
+        rubberbandText: {
+            color: tertiary ? tertiary.contrastText : primary.contrastText,
+        },
+        popover: {
+            mouseEvents: 'none',
+            cursor: 'crosshair',
+        },
+        paper: {
+            paddingLeft: theme.spacing(1),
+            paddingRight: theme.spacing(1),
+        },
+    };
+});
+function RubberbandSpan({ leftBpOffset, rightBpOffset, numOfBpSelected, left, width, }) {
+    const ref = useRef(null);
+    const { classes } = useStyles();
+    return (React.createElement(React.Fragment, null,
+        ref.current ? (React.createElement(React.Fragment, null,
+            React.createElement(Popover, { className: classes.popover, classes: { paper: classes.paper }, open: true, anchorEl: ref.current, anchorOrigin: {
+                    vertical: 'top',
+                    horizontal: 'left',
+                }, transformOrigin: {
+                    vertical: 'bottom',
+                    horizontal: 'right',
+                }, keepMounted: true, disableRestoreFocus: true },
+                React.createElement(Typography, null, stringify(leftBpOffset))),
+            React.createElement(Popover, { className: classes.popover, classes: {
+                    paper: classes.paper,
+                }, open: true, anchorEl: ref.current, anchorOrigin: {
+                    vertical: 'top',
+                    horizontal: 'right',
+                }, transformOrigin: {
+                    vertical: 'bottom',
+                    horizontal: 'left',
+                }, keepMounted: true, disableRestoreFocus: true },
+                React.createElement(Typography, null, stringify(rightBpOffset))))) : null,
+        React.createElement("div", { ref: ref, className: classes.rubberband, style: { left, width } }, numOfBpSelected ? (React.createElement(Typography, { variant: "h6", className: classes.rubberbandText },
+            toLocale(numOfBpSelected),
+            " bp")) : null)));
+}
+export default RubberbandSpan;
+//# sourceMappingURL=RubberbandSpan.js.map

package/esm/LinearGenomeView/components/RubberbandSpan.js.map

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package/esm/LinearGenomeView/components/{ScaleBar.d.ts → Scalebar.d.ts}

@@ -1,10 +1,10 @@
 import React from 'react';
 import { LinearGenomeViewModel } from '..';
-declare type LGV = LinearGenomeViewModel;
-interface ScaleBarProps {
+type LGV = LinearGenomeViewModel;
+interface ScalebarProps {
     model: LGV;
     style?: React.CSSProperties;
     className?: string;
 }
-declare const _default: React.ForwardRefExoticComponent<ScaleBarProps & React.RefAttributes<HTMLDivElement>>;
+declare const _default: React.ForwardRefExoticComponent<ScalebarProps & React.RefAttributes<HTMLDivElement>>;
 export default _default;

package/esm/LinearGenomeView/components/{ScaleBar.js → Scalebar.js}

@@ -7,15 +7,15 @@ import { ContentBlock as ContentBlockComponent, ElidedBlock as ElidedBlockCompon
 import { makeTicks } from '../util';
 import { getTickDisplayStr } from '@jbrowse/core/util';
 const useStyles = makeStyles()(theme => ({
-    scaleBarContainer: {
+    scalebarContainer: {
         overflow: 'hidden',
         position: 'relative',
     },
-    scaleBarZoomContainer: {
+    scalebarZoomContainer: {
         position: 'relative',
         zIndex: 1,
     },
-    scaleBar: {
+    scalebar: {
         position: 'absolute',
         display: 'flex',
         pointerEvents: 'none',
@@ -65,7 +65,7 @@ const RenderedRefNameLabels = observer(({ model }) => {
             }, className: classes.refLabel, "data-testid": `refLabel-${block.refName}` }, block.refName)) : null;
     })));
 });
-const RenderedScaleBarLabels = observer(({ model }) => {
+const RenderedScalebarLabels = observer(({ model }) => {
     const { classes } = useStyles();
     const { bpPerPx, staticBlocks } = model;
     return (React.createElement(React.Fragment, null, staticBlocks.map((block, index) => {
@@ -90,23 +90,23 @@ const RenderedScaleBarLabels = observer(({ model }) => {
         return null;
     })));
 });
-const ScaleBar = React.forwardRef(({ model, style, className, ...other }, ref) => {
+const Scalebar = React.forwardRef(({ model, style, className, ...other }, ref) => {
     const { classes, cx } = useStyles();
     const offsetLeft = model.staticBlocks.offsetPx - model.offsetPx;
     return (React.createElement(Paper, { "data-resizer": "true" // used to avoid click-and-drag scrolls on trackscontainer
-        , className: cx(classes.scaleBarContainer, className), variant: "outlined", ref: ref, style: style, ...other },
-        React.createElement("div", { className: classes.scaleBarZoomContainer, style: {
+        , className: cx(classes.scalebarContainer, className), variant: "outlined", ref: ref, style: style, ...other },
+        React.createElement("div", { className: classes.scalebarZoomContainer, style: {
                 transform: model.scaleFactor !== 1
                     ? `scaleX(${model.scaleFactor})`
                     : undefined,
             } },
-            React.createElement("div", { className: classes.scaleBar, style: {
+            React.createElement("div", { className: classes.scalebar, style: {
                     left: offsetLeft - 1,
                     width: model.staticBlocks.totalWidthPx,
                     ...style,
                 } },
-                React.createElement(RenderedScaleBarLabels, { model: model }))),
+                React.createElement(RenderedScalebarLabels, { model: model }))),
         React.createElement(RenderedRefNameLabels, { model: model })));
 });
-export default observer(ScaleBar);
-//# sourceMappingURL=ScaleBar.js.map
+export default observer(Scalebar);
+//# sourceMappingURL=Scalebar.js.map