pharmaobservatory 0.1.2 → 0.1.4

data/lib/pharmaobservatory/models/cell_lines_list200_response_query_filters.rb

@@ -1,222 +0,0 @@
-=begin
-#Pharma Observatory Public REST API
-
-#Read-only REST API over the Pharma Observatory biomedical data platform. Reference: https://pharmaobservatory.com/api-reference
-
-The version of the OpenAPI document: 1.0.0
-
-Generated by: https://openapi-generator.tech
-Generator version: 7.13.0
-
-=end
-
-require 'date'
-require 'time'
-
-module PharmaObservatory
-  class CellLinesList200ResponseQueryFilters
-    attr_accessor :safety_status
-
-    # Attribute mapping from ruby-style variable name to JSON key.
-    def self.attribute_map
-      {
-        :'safety_status' => :'safety_status'
-      }
-    end
-
-    # Returns attribute mapping this model knows about
-    def self.acceptable_attribute_map
-      attribute_map
-    end
-
-    # Returns all the JSON keys this model knows about
-    def self.acceptable_attributes
-      acceptable_attribute_map.values
-    end
-
-    # Attribute type mapping.
-    def self.openapi_types
-      {
-        :'safety_status' => :'Array<String>'
-      }
-    end
-
-    # List of attributes with nullable: true
-    def self.openapi_nullable
-      Set.new([
-      ])
-    end
-
-    # Initializes the object
-    # @param [Hash] attributes Model attributes in the form of hash
-    def initialize(attributes = {})
-      if (!attributes.is_a?(Hash))
-        fail ArgumentError, "The input argument (attributes) must be a hash in `PharmaObservatory::CellLinesList200ResponseQueryFilters` initialize method"
-      end
-
-      # check to see if the attribute exists and convert string to symbol for hash key
-      acceptable_attribute_map = self.class.acceptable_attribute_map
-      attributes = attributes.each_with_object({}) { |(k, v), h|
-        if (!acceptable_attribute_map.key?(k.to_sym))
-          fail ArgumentError, "`#{k}` is not a valid attribute in `PharmaObservatory::CellLinesList200ResponseQueryFilters`. Please check the name to make sure it's valid. List of attributes: " + acceptable_attribute_map.keys.inspect
-        end
-        h[k.to_sym] = v
-      }
-
-      if attributes.key?(:'safety_status')
-        if (value = attributes[:'safety_status']).is_a?(Array)
-          self.safety_status = value
-        end
-      end
-    end
-
-    # Show invalid properties with the reasons. Usually used together with valid?
-    # @return Array for valid properties with the reasons
-    def list_invalid_properties
-      warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
-      invalid_properties = Array.new
-      invalid_properties
-    end
-
-    # Check to see if the all the properties in the model are valid
-    # @return true if the model is valid
-    def valid?
-      warn '[DEPRECATED] the `valid?` method is obsolete'
-      true
-    end
-
-    # Checks equality by comparing each attribute.
-    # @param [Object] Object to be compared
-    def ==(o)
-      return true if self.equal?(o)
-      self.class == o.class &&
-          safety_status == o.safety_status
-    end
-
-    # @see the `==` method
-    # @param [Object] Object to be compared
-    def eql?(o)
-      self == o
-    end
-
-    # Calculates hash code according to all attributes.
-    # @return [Integer] Hash code
-    def hash
-      [safety_status].hash
-    end
-
-    # Builds the object from hash
-    # @param [Hash] attributes Model attributes in the form of hash
-    # @return [Object] Returns the model itself
-    def self.build_from_hash(attributes)
-      return nil unless attributes.is_a?(Hash)
-      attributes = attributes.transform_keys(&:to_sym)
-      transformed_hash = {}
-      openapi_types.each_pair do |key, type|
-        if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
-          transformed_hash["#{key}"] = nil
-        elsif type =~ /\AArray<(.*)>/i
-          # check to ensure the input is an array given that the attribute
-          # is documented as an array but the input is not
-          if attributes[attribute_map[key]].is_a?(Array)
-            transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
-          end
-        elsif !attributes[attribute_map[key]].nil?
-          transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
-        end
-      end
-      new(transformed_hash)
-    end
-
-    # Deserializes the data based on type
-    # @param string type Data type
-    # @param string value Value to be deserialized
-    # @return [Object] Deserialized data
-    def self._deserialize(type, value)
-      case type.to_sym
-      when :Time
-        Time.parse(value)
-      when :Date
-        Date.parse(value)
-      when :String
-        value.to_s
-      when :Integer
-        value.to_i
-      when :Float
-        value.to_f
-      when :Boolean
-        if value.to_s =~ /\A(true|t|yes|y|1)\z/i
-          true
-        else
-          false
-        end
-      when :Object
-        # generic object (usually a Hash), return directly
-        value
-      when /\AArray<(?<inner_type>.+)>\z/
-        inner_type = Regexp.last_match[:inner_type]
-        value.map { |v| _deserialize(inner_type, v) }
-      when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
-        k_type = Regexp.last_match[:k_type]
-        v_type = Regexp.last_match[:v_type]
-        {}.tap do |hash|
-          value.each do |k, v|
-            hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
-          end
-        end
-      else # model
-        # models (e.g. Pet) or oneOf
-        klass = PharmaObservatory.const_get(type)
-        klass.respond_to?(:openapi_any_of) || klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
-      end
-    end
-
-    # Returns the string representation of the object
-    # @return [String] String presentation of the object
-    def to_s
-      to_hash.to_s
-    end
-
-    # to_body is an alias to to_hash (backward compatibility)
-    # @return [Hash] Returns the object in the form of hash
-    def to_body
-      to_hash
-    end
-
-    # Returns the object in the form of hash
-    # @return [Hash] Returns the object in the form of hash
-    def to_hash
-      hash = {}
-      self.class.attribute_map.each_pair do |attr, param|
-        value = self.send(attr)
-        if value.nil?
-          is_nullable = self.class.openapi_nullable.include?(attr)
-          next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
-        end
-
-        hash[param] = _to_hash(value)
-      end
-      hash
-    end
-
-    # Outputs non-array value in the form of hash
-    # For object, use to_hash. Otherwise, just return the value
-    # @param [Object] value Any valid value
-    # @return [Hash] Returns the value in the form of hash
-    def _to_hash(value)
-      if value.is_a?(Array)
-        value.compact.map { |v| _to_hash(v) }
-      elsif value.is_a?(Hash)
-        {}.tap do |hash|
-          value.each { |k, v| hash[k] = _to_hash(v) }
-        end
-      elsif value.respond_to? :to_hash
-        value.to_hash
-      else
-        value
-      end
-    end
-
-  end
-
-end

data/lib/pharmaobservatory/models/cell_lines_list200_response_rows_inner.rb

@@ -1,441 +0,0 @@
-=begin
-#Pharma Observatory Public REST API
-
-#Read-only REST API over the Pharma Observatory biomedical data platform. Reference: https://pharmaobservatory.com/api-reference
-
-The version of the OpenAPI document: 1.0.0
-
-Generated by: https://openapi-generator.tech
-Generator version: 7.13.0
-
-=end
-
-require 'date'
-require 'time'
-
-module PharmaObservatory
-  class CellLinesList200ResponseRowsInner
-    attr_accessor :scientist_model_id
-
-    attr_accessor :model_lot_id
-
-    attr_accessor :cell_type
-
-    attr_accessor :supplier
-
-    attr_accessor :sample_species
-
-    attr_accessor :safety_status
-
-    attr_accessor :safety_label
-
-    attr_accessor :confirmed_problematic
-
-    attr_accessor :cellosaurus_accession
-
-    attr_accessor :cellosaurus_url
-
-    attr_accessor :problematic_comment
-
-    # Attribute mapping from ruby-style variable name to JSON key.
-    def self.attribute_map
-      {
-        :'scientist_model_id' => :'scientist_model_id',
-        :'model_lot_id' => :'model_lot_id',
-        :'cell_type' => :'cell_type',
-        :'supplier' => :'supplier',
-        :'sample_species' => :'sample_species',
-        :'safety_status' => :'safety_status',
-        :'safety_label' => :'safety_label',
-        :'confirmed_problematic' => :'confirmed_problematic',
-        :'cellosaurus_accession' => :'cellosaurus_accession',
-        :'cellosaurus_url' => :'cellosaurus_url',
-        :'problematic_comment' => :'problematic_comment'
-      }
-    end
-
-    # Returns attribute mapping this model knows about
-    def self.acceptable_attribute_map
-      attribute_map
-    end
-
-    # Returns all the JSON keys this model knows about
-    def self.acceptable_attributes
-      acceptable_attribute_map.values
-    end
-
-    # Attribute type mapping.
-    def self.openapi_types
-      {
-        :'scientist_model_id' => :'String',
-        :'model_lot_id' => :'String',
-        :'cell_type' => :'String',
-        :'supplier' => :'String',
-        :'sample_species' => :'String',
-        :'safety_status' => :'String',
-        :'safety_label' => :'String',
-        :'confirmed_problematic' => :'Boolean',
-        :'cellosaurus_accession' => :'String',
-        :'cellosaurus_url' => :'String',
-        :'problematic_comment' => :'String'
-      }
-    end
-
-    # List of attributes with nullable: true
-    def self.openapi_nullable
-      Set.new([
-        :'cell_type',
-        :'cellosaurus_accession',
-        :'cellosaurus_url',
-        :'problematic_comment'
-      ])
-    end
-
-    # Initializes the object
-    # @param [Hash] attributes Model attributes in the form of hash
-    def initialize(attributes = {})
-      if (!attributes.is_a?(Hash))
-        fail ArgumentError, "The input argument (attributes) must be a hash in `PharmaObservatory::CellLinesList200ResponseRowsInner` initialize method"
-      end
-
-      # check to see if the attribute exists and convert string to symbol for hash key
-      acceptable_attribute_map = self.class.acceptable_attribute_map
-      attributes = attributes.each_with_object({}) { |(k, v), h|
-        if (!acceptable_attribute_map.key?(k.to_sym))
-          fail ArgumentError, "`#{k}` is not a valid attribute in `PharmaObservatory::CellLinesList200ResponseRowsInner`. Please check the name to make sure it's valid. List of attributes: " + acceptable_attribute_map.keys.inspect
-        end
-        h[k.to_sym] = v
-      }
-
-      if attributes.key?(:'scientist_model_id')
-        self.scientist_model_id = attributes[:'scientist_model_id']
-      else
-        self.scientist_model_id = nil
-      end
-
-      if attributes.key?(:'model_lot_id')
-        self.model_lot_id = attributes[:'model_lot_id']
-      else
-        self.model_lot_id = nil
-      end
-
-      if attributes.key?(:'cell_type')
-        self.cell_type = attributes[:'cell_type']
-      else
-        self.cell_type = nil
-      end
-
-      if attributes.key?(:'supplier')
-        self.supplier = attributes[:'supplier']
-      else
-        self.supplier = nil
-      end
-
-      if attributes.key?(:'sample_species')
-        self.sample_species = attributes[:'sample_species']
-      else
-        self.sample_species = nil
-      end
-
-      if attributes.key?(:'safety_status')
-        self.safety_status = attributes[:'safety_status']
-      else
-        self.safety_status = nil
-      end
-
-      if attributes.key?(:'safety_label')
-        self.safety_label = attributes[:'safety_label']
-      else
-        self.safety_label = nil
-      end
-
-      if attributes.key?(:'confirmed_problematic')
-        self.confirmed_problematic = attributes[:'confirmed_problematic']
-      else
-        self.confirmed_problematic = nil
-      end
-
-      if attributes.key?(:'cellosaurus_accession')
-        self.cellosaurus_accession = attributes[:'cellosaurus_accession']
-      else
-        self.cellosaurus_accession = nil
-      end
-
-      if attributes.key?(:'cellosaurus_url')
-        self.cellosaurus_url = attributes[:'cellosaurus_url']
-      else
-        self.cellosaurus_url = nil
-      end
-
-      if attributes.key?(:'problematic_comment')
-        self.problematic_comment = attributes[:'problematic_comment']
-      else
-        self.problematic_comment = nil
-      end
-    end
-
-    # Show invalid properties with the reasons. Usually used together with valid?
-    # @return Array for valid properties with the reasons
-    def list_invalid_properties
-      warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
-      invalid_properties = Array.new
-      if @scientist_model_id.nil?
-        invalid_properties.push('invalid value for "scientist_model_id", scientist_model_id cannot be nil.')
-      end
-
-      if @model_lot_id.nil?
-        invalid_properties.push('invalid value for "model_lot_id", model_lot_id cannot be nil.')
-      end
-
-      if @supplier.nil?
-        invalid_properties.push('invalid value for "supplier", supplier cannot be nil.')
-      end
-
-      if @sample_species.nil?
-        invalid_properties.push('invalid value for "sample_species", sample_species cannot be nil.')
-      end
-
-      if @safety_status.nil?
-        invalid_properties.push('invalid value for "safety_status", safety_status cannot be nil.')
-      end
-
-      if @safety_label.nil?
-        invalid_properties.push('invalid value for "safety_label", safety_label cannot be nil.')
-      end
-
-      if @confirmed_problematic.nil?
-        invalid_properties.push('invalid value for "confirmed_problematic", confirmed_problematic cannot be nil.')
-      end
-
-      invalid_properties
-    end
-
-    # Check to see if the all the properties in the model are valid
-    # @return true if the model is valid
-    def valid?
-      warn '[DEPRECATED] the `valid?` method is obsolete'
-      return false if @scientist_model_id.nil?
-      return false if @model_lot_id.nil?
-      return false if @supplier.nil?
-      return false if @sample_species.nil?
-      return false if @safety_status.nil?
-      return false if @safety_label.nil?
-      return false if @confirmed_problematic.nil?
-      true
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] scientist_model_id Value to be assigned
-    def scientist_model_id=(scientist_model_id)
-      if scientist_model_id.nil?
-        fail ArgumentError, 'scientist_model_id cannot be nil'
-      end
-
-      @scientist_model_id = scientist_model_id
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] model_lot_id Value to be assigned
-    def model_lot_id=(model_lot_id)
-      if model_lot_id.nil?
-        fail ArgumentError, 'model_lot_id cannot be nil'
-      end
-
-      @model_lot_id = model_lot_id
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] supplier Value to be assigned
-    def supplier=(supplier)
-      if supplier.nil?
-        fail ArgumentError, 'supplier cannot be nil'
-      end
-
-      @supplier = supplier
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] sample_species Value to be assigned
-    def sample_species=(sample_species)
-      if sample_species.nil?
-        fail ArgumentError, 'sample_species cannot be nil'
-      end
-
-      @sample_species = sample_species
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] safety_status Value to be assigned
-    def safety_status=(safety_status)
-      if safety_status.nil?
-        fail ArgumentError, 'safety_status cannot be nil'
-      end
-
-      @safety_status = safety_status
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] safety_label Value to be assigned
-    def safety_label=(safety_label)
-      if safety_label.nil?
-        fail ArgumentError, 'safety_label cannot be nil'
-      end
-
-      @safety_label = safety_label
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] confirmed_problematic Value to be assigned
-    def confirmed_problematic=(confirmed_problematic)
-      if confirmed_problematic.nil?
-        fail ArgumentError, 'confirmed_problematic cannot be nil'
-      end
-
-      @confirmed_problematic = confirmed_problematic
-    end
-
-    # Checks equality by comparing each attribute.
-    # @param [Object] Object to be compared
-    def ==(o)
-      return true if self.equal?(o)
-      self.class == o.class &&
-          scientist_model_id == o.scientist_model_id &&
-          model_lot_id == o.model_lot_id &&
-          cell_type == o.cell_type &&
-          supplier == o.supplier &&
-          sample_species == o.sample_species &&
-          safety_status == o.safety_status &&
-          safety_label == o.safety_label &&
-          confirmed_problematic == o.confirmed_problematic &&
-          cellosaurus_accession == o.cellosaurus_accession &&
-          cellosaurus_url == o.cellosaurus_url &&
-          problematic_comment == o.problematic_comment
-    end
-
-    # @see the `==` method
-    # @param [Object] Object to be compared
-    def eql?(o)
-      self == o
-    end
-
-    # Calculates hash code according to all attributes.
-    # @return [Integer] Hash code
-    def hash
-      [scientist_model_id, model_lot_id, cell_type, supplier, sample_species, safety_status, safety_label, confirmed_problematic, cellosaurus_accession, cellosaurus_url, problematic_comment].hash
-    end
-
-    # Builds the object from hash
-    # @param [Hash] attributes Model attributes in the form of hash
-    # @return [Object] Returns the model itself
-    def self.build_from_hash(attributes)
-      return nil unless attributes.is_a?(Hash)
-      attributes = attributes.transform_keys(&:to_sym)
-      transformed_hash = {}
-      openapi_types.each_pair do |key, type|
-        if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
-          transformed_hash["#{key}"] = nil
-        elsif type =~ /\AArray<(.*)>/i
-          # check to ensure the input is an array given that the attribute
-          # is documented as an array but the input is not
-          if attributes[attribute_map[key]].is_a?(Array)
-            transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
-          end
-        elsif !attributes[attribute_map[key]].nil?
-          transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
-        end
-      end
-      new(transformed_hash)
-    end
-
-    # Deserializes the data based on type
-    # @param string type Data type
-    # @param string value Value to be deserialized
-    # @return [Object] Deserialized data
-    def self._deserialize(type, value)
-      case type.to_sym
-      when :Time
-        Time.parse(value)
-      when :Date
-        Date.parse(value)
-      when :String
-        value.to_s
-      when :Integer
-        value.to_i
-      when :Float
-        value.to_f
-      when :Boolean
-        if value.to_s =~ /\A(true|t|yes|y|1)\z/i
-          true
-        else
-          false
-        end
-      when :Object
-        # generic object (usually a Hash), return directly
-        value
-      when /\AArray<(?<inner_type>.+)>\z/
-        inner_type = Regexp.last_match[:inner_type]
-        value.map { |v| _deserialize(inner_type, v) }
-      when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
-        k_type = Regexp.last_match[:k_type]
-        v_type = Regexp.last_match[:v_type]
-        {}.tap do |hash|
-          value.each do |k, v|
-            hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
-          end
-        end
-      else # model
-        # models (e.g. Pet) or oneOf
-        klass = PharmaObservatory.const_get(type)
-        klass.respond_to?(:openapi_any_of) || klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
-      end
-    end
-
-    # Returns the string representation of the object
-    # @return [String] String presentation of the object
-    def to_s
-      to_hash.to_s
-    end
-
-    # to_body is an alias to to_hash (backward compatibility)
-    # @return [Hash] Returns the object in the form of hash
-    def to_body
-      to_hash
-    end
-
-    # Returns the object in the form of hash
-    # @return [Hash] Returns the object in the form of hash
-    def to_hash
-      hash = {}
-      self.class.attribute_map.each_pair do |attr, param|
-        value = self.send(attr)
-        if value.nil?
-          is_nullable = self.class.openapi_nullable.include?(attr)
-          next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
-        end
-
-        hash[param] = _to_hash(value)
-      end
-      hash
-    end
-
-    # Outputs non-array value in the form of hash
-    # For object, use to_hash. Otherwise, just return the value
-    # @param [Object] value Any valid value
-    # @return [Hash] Returns the value in the form of hash
-    def _to_hash(value)
-      if value.is_a?(Array)
-        value.compact.map { |v| _to_hash(v) }
-      elsif value.is_a?(Hash)
-        {}.tap do |hash|
-          value.each { |k, v| hash[k] = _to_hash(v) }
-        end
-      elsif value.respond_to? :to_hash
-        value.to_hash
-      else
-        value
-      end
-    end
-
-  end
-
-end