pharmaobservatory 0.1.2 → 0.1.4

data/lib/pharmaobservatory/models/biomarkers_cgi200_response_attribution_inner.rb

@@ -1,289 +0,0 @@
-=begin
-#Pharma Observatory Public REST API
-
-#Read-only REST API over the Pharma Observatory biomedical data platform. Reference: https://pharmaobservatory.com/api-reference
-
-The version of the OpenAPI document: 1.0.0
-
-Generated by: https://openapi-generator.tech
-Generator version: 7.13.0
-
-=end
-
-require 'date'
-require 'time'
-
-module PharmaObservatory
-  class BiomarkersCgi200ResponseAttributionInner
-    attr_accessor :name
-
-    attr_accessor :license
-
-    attr_accessor :href
-
-    # Attribute mapping from ruby-style variable name to JSON key.
-    def self.attribute_map
-      {
-        :'name' => :'name',
-        :'license' => :'license',
-        :'href' => :'href'
-      }
-    end
-
-    # Returns attribute mapping this model knows about
-    def self.acceptable_attribute_map
-      attribute_map
-    end
-
-    # Returns all the JSON keys this model knows about
-    def self.acceptable_attributes
-      acceptable_attribute_map.values
-    end
-
-    # Attribute type mapping.
-    def self.openapi_types
-      {
-        :'name' => :'String',
-        :'license' => :'String',
-        :'href' => :'String'
-      }
-    end
-
-    # List of attributes with nullable: true
-    def self.openapi_nullable
-      Set.new([
-      ])
-    end
-
-    # Initializes the object
-    # @param [Hash] attributes Model attributes in the form of hash
-    def initialize(attributes = {})
-      if (!attributes.is_a?(Hash))
-        fail ArgumentError, "The input argument (attributes) must be a hash in `PharmaObservatory::BiomarkersCgi200ResponseAttributionInner` initialize method"
-      end
-
-      # check to see if the attribute exists and convert string to symbol for hash key
-      acceptable_attribute_map = self.class.acceptable_attribute_map
-      attributes = attributes.each_with_object({}) { |(k, v), h|
-        if (!acceptable_attribute_map.key?(k.to_sym))
-          fail ArgumentError, "`#{k}` is not a valid attribute in `PharmaObservatory::BiomarkersCgi200ResponseAttributionInner`. Please check the name to make sure it's valid. List of attributes: " + acceptable_attribute_map.keys.inspect
-        end
-        h[k.to_sym] = v
-      }
-
-      if attributes.key?(:'name')
-        self.name = attributes[:'name']
-      else
-        self.name = nil
-      end
-
-      if attributes.key?(:'license')
-        self.license = attributes[:'license']
-      else
-        self.license = nil
-      end
-
-      if attributes.key?(:'href')
-        self.href = attributes[:'href']
-      else
-        self.href = nil
-      end
-    end
-
-    # Show invalid properties with the reasons. Usually used together with valid?
-    # @return Array for valid properties with the reasons
-    def list_invalid_properties
-      warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
-      invalid_properties = Array.new
-      if @name.nil?
-        invalid_properties.push('invalid value for "name", name cannot be nil.')
-      end
-
-      if @license.nil?
-        invalid_properties.push('invalid value for "license", license cannot be nil.')
-      end
-
-      if @href.nil?
-        invalid_properties.push('invalid value for "href", href cannot be nil.')
-      end
-
-      invalid_properties
-    end
-
-    # Check to see if the all the properties in the model are valid
-    # @return true if the model is valid
-    def valid?
-      warn '[DEPRECATED] the `valid?` method is obsolete'
-      return false if @name.nil?
-      return false if @license.nil?
-      return false if @href.nil?
-      true
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] name Value to be assigned
-    def name=(name)
-      if name.nil?
-        fail ArgumentError, 'name cannot be nil'
-      end
-
-      @name = name
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] license Value to be assigned
-    def license=(license)
-      if license.nil?
-        fail ArgumentError, 'license cannot be nil'
-      end
-
-      @license = license
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] href Value to be assigned
-    def href=(href)
-      if href.nil?
-        fail ArgumentError, 'href cannot be nil'
-      end
-
-      @href = href
-    end
-
-    # Checks equality by comparing each attribute.
-    # @param [Object] Object to be compared
-    def ==(o)
-      return true if self.equal?(o)
-      self.class == o.class &&
-          name == o.name &&
-          license == o.license &&
-          href == o.href
-    end
-
-    # @see the `==` method
-    # @param [Object] Object to be compared
-    def eql?(o)
-      self == o
-    end
-
-    # Calculates hash code according to all attributes.
-    # @return [Integer] Hash code
-    def hash
-      [name, license, href].hash
-    end
-
-    # Builds the object from hash
-    # @param [Hash] attributes Model attributes in the form of hash
-    # @return [Object] Returns the model itself
-    def self.build_from_hash(attributes)
-      return nil unless attributes.is_a?(Hash)
-      attributes = attributes.transform_keys(&:to_sym)
-      transformed_hash = {}
-      openapi_types.each_pair do |key, type|
-        if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
-          transformed_hash["#{key}"] = nil
-        elsif type =~ /\AArray<(.*)>/i
-          # check to ensure the input is an array given that the attribute
-          # is documented as an array but the input is not
-          if attributes[attribute_map[key]].is_a?(Array)
-            transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
-          end
-        elsif !attributes[attribute_map[key]].nil?
-          transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
-        end
-      end
-      new(transformed_hash)
-    end
-
-    # Deserializes the data based on type
-    # @param string type Data type
-    # @param string value Value to be deserialized
-    # @return [Object] Deserialized data
-    def self._deserialize(type, value)
-      case type.to_sym
-      when :Time
-        Time.parse(value)
-      when :Date
-        Date.parse(value)
-      when :String
-        value.to_s
-      when :Integer
-        value.to_i
-      when :Float
-        value.to_f
-      when :Boolean
-        if value.to_s =~ /\A(true|t|yes|y|1)\z/i
-          true
-        else
-          false
-        end
-      when :Object
-        # generic object (usually a Hash), return directly
-        value
-      when /\AArray<(?<inner_type>.+)>\z/
-        inner_type = Regexp.last_match[:inner_type]
-        value.map { |v| _deserialize(inner_type, v) }
-      when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
-        k_type = Regexp.last_match[:k_type]
-        v_type = Regexp.last_match[:v_type]
-        {}.tap do |hash|
-          value.each do |k, v|
-            hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
-          end
-        end
-      else # model
-        # models (e.g. Pet) or oneOf
-        klass = PharmaObservatory.const_get(type)
-        klass.respond_to?(:openapi_any_of) || klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
-      end
-    end
-
-    # Returns the string representation of the object
-    # @return [String] String presentation of the object
-    def to_s
-      to_hash.to_s
-    end
-
-    # to_body is an alias to to_hash (backward compatibility)
-    # @return [Hash] Returns the object in the form of hash
-    def to_body
-      to_hash
-    end
-
-    # Returns the object in the form of hash
-    # @return [Hash] Returns the object in the form of hash
-    def to_hash
-      hash = {}
-      self.class.attribute_map.each_pair do |attr, param|
-        value = self.send(attr)
-        if value.nil?
-          is_nullable = self.class.openapi_nullable.include?(attr)
-          next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
-        end
-
-        hash[param] = _to_hash(value)
-      end
-      hash
-    end
-
-    # Outputs non-array value in the form of hash
-    # For object, use to_hash. Otherwise, just return the value
-    # @param [Object] value Any valid value
-    # @return [Hash] Returns the value in the form of hash
-    def _to_hash(value)
-      if value.is_a?(Array)
-        value.compact.map { |v| _to_hash(v) }
-      elsif value.is_a?(Hash)
-        {}.tap do |hash|
-          value.each { |k, v| hash[k] = _to_hash(v) }
-        end
-      elsif value.respond_to? :to_hash
-        value.to_hash
-      else
-        value
-      end
-    end
-
-  end
-
-end

data/lib/pharmaobservatory/models/biomarkers_cgi200_response_rows_inner.rb

@@ -1,431 +0,0 @@
-=begin
-#Pharma Observatory Public REST API
-
-#Read-only REST API over the Pharma Observatory biomedical data platform. Reference: https://pharmaobservatory.com/api-reference
-
-The version of the OpenAPI document: 1.0.0
-
-Generated by: https://openapi-generator.tech
-Generator version: 7.13.0
-
-=end
-
-require 'date'
-require 'time'
-
-module PharmaObservatory
-  class BiomarkersCgi200ResponseRowsInner
-    attr_accessor :biomarker
-
-    attr_accessor :variant_count
-
-    attr_accessor :drug
-
-    attr_accessor :canonical_drug_id
-
-    attr_accessor :response
-
-    attr_accessor :disease
-
-    attr_accessor :source
-
-    attr_accessor :source_label
-
-    attr_accessor :score
-
-    # Attribute mapping from ruby-style variable name to JSON key.
-    def self.attribute_map
-      {
-        :'biomarker' => :'biomarker',
-        :'variant_count' => :'variant_count',
-        :'drug' => :'drug',
-        :'canonical_drug_id' => :'canonical_drug_id',
-        :'response' => :'response',
-        :'disease' => :'disease',
-        :'source' => :'source',
-        :'source_label' => :'source_label',
-        :'score' => :'score'
-      }
-    end
-
-    # Returns attribute mapping this model knows about
-    def self.acceptable_attribute_map
-      attribute_map
-    end
-
-    # Returns all the JSON keys this model knows about
-    def self.acceptable_attributes
-      acceptable_attribute_map.values
-    end
-
-    # Attribute type mapping.
-    def self.openapi_types
-      {
-        :'biomarker' => :'String',
-        :'variant_count' => :'Integer',
-        :'drug' => :'String',
-        :'canonical_drug_id' => :'String',
-        :'response' => :'String',
-        :'disease' => :'String',
-        :'source' => :'String',
-        :'source_label' => :'String',
-        :'score' => :'Float'
-      }
-    end
-
-    # List of attributes with nullable: true
-    def self.openapi_nullable
-      Set.new([
-        :'canonical_drug_id',
-      ])
-    end
-
-    # Initializes the object
-    # @param [Hash] attributes Model attributes in the form of hash
-    def initialize(attributes = {})
-      if (!attributes.is_a?(Hash))
-        fail ArgumentError, "The input argument (attributes) must be a hash in `PharmaObservatory::BiomarkersCgi200ResponseRowsInner` initialize method"
-      end
-
-      # check to see if the attribute exists and convert string to symbol for hash key
-      acceptable_attribute_map = self.class.acceptable_attribute_map
-      attributes = attributes.each_with_object({}) { |(k, v), h|
-        if (!acceptable_attribute_map.key?(k.to_sym))
-          fail ArgumentError, "`#{k}` is not a valid attribute in `PharmaObservatory::BiomarkersCgi200ResponseRowsInner`. Please check the name to make sure it's valid. List of attributes: " + acceptable_attribute_map.keys.inspect
-        end
-        h[k.to_sym] = v
-      }
-
-      if attributes.key?(:'biomarker')
-        self.biomarker = attributes[:'biomarker']
-      else
-        self.biomarker = nil
-      end
-
-      if attributes.key?(:'variant_count')
-        self.variant_count = attributes[:'variant_count']
-      else
-        self.variant_count = nil
-      end
-
-      if attributes.key?(:'drug')
-        self.drug = attributes[:'drug']
-      else
-        self.drug = nil
-      end
-
-      if attributes.key?(:'canonical_drug_id')
-        self.canonical_drug_id = attributes[:'canonical_drug_id']
-      else
-        self.canonical_drug_id = nil
-      end
-
-      if attributes.key?(:'response')
-        self.response = attributes[:'response']
-      else
-        self.response = nil
-      end
-
-      if attributes.key?(:'disease')
-        self.disease = attributes[:'disease']
-      else
-        self.disease = nil
-      end
-
-      if attributes.key?(:'source')
-        self.source = attributes[:'source']
-      else
-        self.source = nil
-      end
-
-      if attributes.key?(:'source_label')
-        self.source_label = attributes[:'source_label']
-      else
-        self.source_label = nil
-      end
-
-      if attributes.key?(:'score')
-        self.score = attributes[:'score']
-      else
-        self.score = nil
-      end
-    end
-
-    # Show invalid properties with the reasons. Usually used together with valid?
-    # @return Array for valid properties with the reasons
-    def list_invalid_properties
-      warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
-      invalid_properties = Array.new
-      if @biomarker.nil?
-        invalid_properties.push('invalid value for "biomarker", biomarker cannot be nil.')
-      end
-
-      if @variant_count.nil?
-        invalid_properties.push('invalid value for "variant_count", variant_count cannot be nil.')
-      end
-
-      if @drug.nil?
-        invalid_properties.push('invalid value for "drug", drug cannot be nil.')
-      end
-
-      if @response.nil?
-        invalid_properties.push('invalid value for "response", response cannot be nil.')
-      end
-
-      if @disease.nil?
-        invalid_properties.push('invalid value for "disease", disease cannot be nil.')
-      end
-
-      if @source.nil?
-        invalid_properties.push('invalid value for "source", source cannot be nil.')
-      end
-
-      if @source_label.nil?
-        invalid_properties.push('invalid value for "source_label", source_label cannot be nil.')
-      end
-
-      if @score.nil?
-        invalid_properties.push('invalid value for "score", score cannot be nil.')
-      end
-
-      invalid_properties
-    end
-
-    # Check to see if the all the properties in the model are valid
-    # @return true if the model is valid
-    def valid?
-      warn '[DEPRECATED] the `valid?` method is obsolete'
-      return false if @biomarker.nil?
-      return false if @variant_count.nil?
-      return false if @drug.nil?
-      return false if @response.nil?
-      return false if @disease.nil?
-      return false if @source.nil?
-      return false if @source_label.nil?
-      return false if @score.nil?
-      true
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] biomarker Value to be assigned
-    def biomarker=(biomarker)
-      if biomarker.nil?
-        fail ArgumentError, 'biomarker cannot be nil'
-      end
-
-      @biomarker = biomarker
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] variant_count Value to be assigned
-    def variant_count=(variant_count)
-      if variant_count.nil?
-        fail ArgumentError, 'variant_count cannot be nil'
-      end
-
-      @variant_count = variant_count
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] drug Value to be assigned
-    def drug=(drug)
-      if drug.nil?
-        fail ArgumentError, 'drug cannot be nil'
-      end
-
-      @drug = drug
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] response Value to be assigned
-    def response=(response)
-      if response.nil?
-        fail ArgumentError, 'response cannot be nil'
-      end
-
-      @response = response
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] disease Value to be assigned
-    def disease=(disease)
-      if disease.nil?
-        fail ArgumentError, 'disease cannot be nil'
-      end
-
-      @disease = disease
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] source Value to be assigned
-    def source=(source)
-      if source.nil?
-        fail ArgumentError, 'source cannot be nil'
-      end
-
-      @source = source
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] source_label Value to be assigned
-    def source_label=(source_label)
-      if source_label.nil?
-        fail ArgumentError, 'source_label cannot be nil'
-      end
-
-      @source_label = source_label
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] score Value to be assigned
-    def score=(score)
-      if score.nil?
-        fail ArgumentError, 'score cannot be nil'
-      end
-
-      @score = score
-    end
-
-    # Checks equality by comparing each attribute.
-    # @param [Object] Object to be compared
-    def ==(o)
-      return true if self.equal?(o)
-      self.class == o.class &&
-          biomarker == o.biomarker &&
-          variant_count == o.variant_count &&
-          drug == o.drug &&
-          canonical_drug_id == o.canonical_drug_id &&
-          response == o.response &&
-          disease == o.disease &&
-          source == o.source &&
-          source_label == o.source_label &&
-          score == o.score
-    end
-
-    # @see the `==` method
-    # @param [Object] Object to be compared
-    def eql?(o)
-      self == o
-    end
-
-    # Calculates hash code according to all attributes.
-    # @return [Integer] Hash code
-    def hash
-      [biomarker, variant_count, drug, canonical_drug_id, response, disease, source, source_label, score].hash
-    end
-
-    # Builds the object from hash
-    # @param [Hash] attributes Model attributes in the form of hash
-    # @return [Object] Returns the model itself
-    def self.build_from_hash(attributes)
-      return nil unless attributes.is_a?(Hash)
-      attributes = attributes.transform_keys(&:to_sym)
-      transformed_hash = {}
-      openapi_types.each_pair do |key, type|
-        if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
-          transformed_hash["#{key}"] = nil
-        elsif type =~ /\AArray<(.*)>/i
-          # check to ensure the input is an array given that the attribute
-          # is documented as an array but the input is not
-          if attributes[attribute_map[key]].is_a?(Array)
-            transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
-          end
-        elsif !attributes[attribute_map[key]].nil?
-          transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
-        end
-      end
-      new(transformed_hash)
-    end
-
-    # Deserializes the data based on type
-    # @param string type Data type
-    # @param string value Value to be deserialized
-    # @return [Object] Deserialized data
-    def self._deserialize(type, value)
-      case type.to_sym
-      when :Time
-        Time.parse(value)
-      when :Date
-        Date.parse(value)
-      when :String
-        value.to_s
-      when :Integer
-        value.to_i
-      when :Float
-        value.to_f
-      when :Boolean
-        if value.to_s =~ /\A(true|t|yes|y|1)\z/i
-          true
-        else
-          false
-        end
-      when :Object
-        # generic object (usually a Hash), return directly
-        value
-      when /\AArray<(?<inner_type>.+)>\z/
-        inner_type = Regexp.last_match[:inner_type]
-        value.map { |v| _deserialize(inner_type, v) }
-      when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
-        k_type = Regexp.last_match[:k_type]
-        v_type = Regexp.last_match[:v_type]
-        {}.tap do |hash|
-          value.each do |k, v|
-            hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
-          end
-        end
-      else # model
-        # models (e.g. Pet) or oneOf
-        klass = PharmaObservatory.const_get(type)
-        klass.respond_to?(:openapi_any_of) || klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
-      end
-    end
-
-    # Returns the string representation of the object
-    # @return [String] String presentation of the object
-    def to_s
-      to_hash.to_s
-    end
-
-    # to_body is an alias to to_hash (backward compatibility)
-    # @return [Hash] Returns the object in the form of hash
-    def to_body
-      to_hash
-    end
-
-    # Returns the object in the form of hash
-    # @return [Hash] Returns the object in the form of hash
-    def to_hash
-      hash = {}
-      self.class.attribute_map.each_pair do |attr, param|
-        value = self.send(attr)
-        if value.nil?
-          is_nullable = self.class.openapi_nullable.include?(attr)
-          next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
-        end
-
-        hash[param] = _to_hash(value)
-      end
-      hash
-    end
-
-    # Outputs non-array value in the form of hash
-    # For object, use to_hash. Otherwise, just return the value
-    # @param [Object] value Any valid value
-    # @return [Hash] Returns the value in the form of hash
-    def _to_hash(value)
-      if value.is_a?(Array)
-        value.compact.map { |v| _to_hash(v) }
-      elsif value.is_a?(Hash)
-        {}.tap do |hash|
-          value.each { |k, v| hash[k] = _to_hash(v) }
-        end
-      elsif value.respond_to? :to_hash
-        value.to_hash
-      else
-        value
-      end
-    end
-
-  end
-
-end