galaaz 0.4.10 → 0.5.0
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- checksums.yaml +4 -4
- data/README.md +2048 -531
- data/Rakefile +3 -2
- data/bin/gknit +152 -6
- data/bin/gknit-draft +105 -0
- data/bin/gknit-draft.rb +28 -0
- data/bin/gknit_Rscript +127 -0
- data/bin/grun +27 -1
- data/bin/gstudio +47 -4
- data/bin/{gstudio.rb → gstudio_irb.rb} +0 -0
- data/bin/gstudio_pry.rb +7 -0
- data/blogs/galaaz_ggplot/galaaz_ggplot.html +10 -195
- data/blogs/galaaz_ggplot/galaaz_ggplot.md +404 -0
- data/blogs/galaaz_ggplot/galaaz_ggplot_files/figure-html/midwest_rb.png +0 -0
- data/blogs/galaaz_ggplot/galaaz_ggplot_files/figure-html/scatter_plot_rb.png +0 -0
- data/blogs/gknit/gknit.Rmd +5 -3
- data/blogs/gknit/gknit.pdf +0 -0
- data/blogs/gknit/lst.rds +0 -0
- data/blogs/manual/lst.rds +0 -0
- data/blogs/manual/manual.Rmd +826 -53
- data/blogs/manual/manual.html +2338 -695
- data/blogs/manual/manual.md +2032 -539
- data/blogs/manual/manual.pdf +0 -0
- data/blogs/manual/manual.tex +1804 -594
- data/blogs/manual/manual_files/figure-html/bubble-1.png +0 -0
- data/blogs/manual/manual_files/figure-html/diverging_bar.png +0 -0
- data/blogs/manual/manual_files/figure-latex/bubble-1.png +0 -0
- data/blogs/manual/manual_files/figure-latex/diverging_bar.pdf +0 -0
- data/blogs/manual/model.rb +41 -0
- data/blogs/nse_dplyr/nse_dplyr.Rmd +226 -73
- data/blogs/nse_dplyr/nse_dplyr.html +254 -336
- data/blogs/nse_dplyr/nse_dplyr.md +353 -158
- data/blogs/oh_my/oh_my.html +274 -386
- data/blogs/oh_my/oh_my.md +208 -205
- data/blogs/ruby_plot/ruby_plot.html +20 -205
- data/blogs/ruby_plot/ruby_plot.md +14 -15
- data/blogs/ruby_plot/ruby_plot_files/figure-html/dose_len.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facet_by_delivery.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facet_by_dose.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facets_by_delivery_color.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facets_by_delivery_color2.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facets_with_decorations.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facets_with_jitter.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facets_with_points.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-html/final_box_plot.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-html/final_violin_plot.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-html/violin_with_jitter.png +0 -0
- data/examples/Bibliography/master.bib +50 -0
- data/examples/Bibliography/stats.bib +72 -0
- data/examples/islr/x_y_rnorm.jpg +0 -0
- data/examples/latex_templates/Test-acm_article/Makefile +16 -0
- data/examples/latex_templates/Test-acm_article/Test-acm_article.Rmd +65 -0
- data/examples/latex_templates/Test-acm_article/acm_proc_article-sp.cls +1670 -0
- data/examples/latex_templates/Test-acm_article/sensys-abstract.cls +703 -0
- data/examples/latex_templates/Test-acm_article/sigproc.bib +59 -0
- data/examples/latex_templates/Test-acs_article/Test-acs_article.Rmd +260 -0
- data/examples/latex_templates/Test-acs_article/Test-acs_article.pdf +0 -0
- data/examples/latex_templates/Test-acs_article/acs-Test-acs_article.bib +11 -0
- data/examples/latex_templates/Test-acs_article/acs-my_output.bib +11 -0
- data/examples/latex_templates/Test-acs_article/acstest.bib +17 -0
- data/examples/latex_templates/Test-aea_article/AEA.cls +1414 -0
- data/{blogs/gknit/marshal.dump → examples/latex_templates/Test-aea_article/BibFile.bib} +0 -0
- data/examples/latex_templates/Test-aea_article/Test-aea_article.Rmd +108 -0
- data/examples/latex_templates/Test-aea_article/Test-aea_article.pdf +0 -0
- data/examples/latex_templates/Test-aea_article/aea.bst +1269 -0
- data/examples/latex_templates/Test-aea_article/multicol.sty +853 -0
- data/examples/latex_templates/Test-aea_article/references.bib +0 -0
- data/examples/latex_templates/Test-aea_article/setspace.sty +546 -0
- data/examples/latex_templates/Test-amq_article/Test-amq_article.Rmd +256 -0
- data/examples/latex_templates/Test-amq_article/Test-amq_article.pdf +0 -0
- data/examples/latex_templates/Test-amq_article/Test-amq_article.pdfsync +3397 -0
- data/examples/latex_templates/Test-amq_article/pics/Figure2.pdf +0 -0
- data/examples/latex_templates/Test-ams_article/Test-ams_article.Rmd +215 -0
- data/examples/latex_templates/Test-ams_article/amstest.bib +436 -0
- data/examples/latex_templates/Test-asa_article/Test-asa_article.Rmd +153 -0
- data/examples/latex_templates/Test-asa_article/Test-asa_article.pdf +0 -0
- data/examples/latex_templates/Test-asa_article/agsm.bst +1353 -0
- data/examples/latex_templates/Test-asa_article/bibliography.bib +233 -0
- data/examples/latex_templates/Test-ieee_article/IEEEtran.bst +2409 -0
- data/examples/latex_templates/Test-ieee_article/IEEEtran.cls +6346 -0
- data/examples/latex_templates/Test-ieee_article/Test-ieee_article.Rmd +175 -0
- data/examples/latex_templates/Test-ieee_article/Test-ieee_article.pdf +0 -0
- data/examples/latex_templates/Test-ieee_article/mybibfile.bib +20 -0
- data/examples/latex_templates/Test-rjournal_article/RJournal.sty +335 -0
- data/examples/latex_templates/Test-rjournal_article/RJreferences.bib +18 -0
- data/examples/latex_templates/Test-rjournal_article/RJwrapper.pdf +0 -0
- data/examples/latex_templates/Test-rjournal_article/Test-rjournal_article.Rmd +52 -0
- data/examples/latex_templates/Test-springer_article/Test-springer_article.Rmd +65 -0
- data/examples/latex_templates/Test-springer_article/Test-springer_article.pdf +0 -0
- data/examples/latex_templates/Test-springer_article/bibliography.bib +26 -0
- data/examples/latex_templates/Test-springer_article/spbasic.bst +1658 -0
- data/examples/latex_templates/Test-springer_article/spmpsci.bst +1512 -0
- data/examples/latex_templates/Test-springer_article/spphys.bst +1443 -0
- data/examples/latex_templates/Test-springer_article/svglov3.clo +113 -0
- data/examples/latex_templates/Test-springer_article/svjour3.cls +1431 -0
- data/examples/rmarkdown/svm-rmarkdown-anon-ms-example/svm-rmarkdown-anon-ms-example.Rmd +73 -0
- data/examples/rmarkdown/svm-rmarkdown-anon-ms-example/svm-rmarkdown-anon-ms-example.pdf +0 -0
- data/examples/rmarkdown/svm-rmarkdown-article-example/svm-rmarkdown-article-example.Rmd +382 -0
- data/examples/rmarkdown/svm-rmarkdown-article-example/svm-rmarkdown-article-example.pdf +0 -0
- data/examples/rmarkdown/svm-rmarkdown-beamer-example/svm-rmarkdown-beamer-example.Rmd +164 -0
- data/examples/rmarkdown/svm-rmarkdown-beamer-example/svm-rmarkdown-beamer-example.pdf +0 -0
- data/examples/rmarkdown/svm-rmarkdown-cv/svm-rmarkdown-cv.Rmd +92 -0
- data/examples/rmarkdown/svm-rmarkdown-cv/svm-rmarkdown-cv.pdf +0 -0
- data/examples/rmarkdown/svm-rmarkdown-syllabus-example/attend-grade-relationships.csv +482 -0
- data/examples/rmarkdown/svm-rmarkdown-syllabus-example/svm-rmarkdown-syllabus-example.Rmd +280 -0
- data/examples/rmarkdown/svm-rmarkdown-syllabus-example/svm-rmarkdown-syllabus-example.pdf +0 -0
- data/examples/rmarkdown/svm-xaringan-example/svm-xaringan-example.Rmd +386 -0
- data/lib/R_interface/r.rb +1 -1
- data/lib/R_interface/r_libs.R +1 -1
- data/lib/R_interface/r_methods.rb +10 -0
- data/lib/R_interface/rpkg.rb +1 -0
- data/lib/R_interface/rsupport.rb +4 -6
- data/lib/gknit.rb +2 -0
- data/lib/gknit/draft.rb +105 -0
- data/lib/gknit/knitr_engine.rb +0 -33
- data/lib/util/exec_ruby.rb +1 -27
- data/specs/figures/bg.jpeg +0 -0
- data/specs/figures/bg.png +0 -0
- data/specs/figures/dose_len.png +0 -0
- data/specs/figures/no_args.jpeg +0 -0
- data/specs/figures/no_args.png +0 -0
- data/specs/figures/width_height.jpeg +0 -0
- data/specs/figures/width_height.png +0 -0
- data/specs/figures/width_height_units1.jpeg +0 -0
- data/specs/figures/width_height_units1.png +0 -0
- data/specs/figures/width_height_units2.jpeg +0 -0
- data/specs/figures/width_height_units2.png +0 -0
- data/specs/r_dataframe.spec.rb +11 -11
- data/specs/ruby_expression.spec.rb +1 -0
- data/specs/tmp.rb +41 -20
- data/version.rb +1 -1
- metadata +73 -35
- data/blogs/galaaz_ggplot/galaaz_ggplot.aux +0 -41
- data/blogs/galaaz_ggplot/galaaz_ggplot.out +0 -10
- data/blogs/galaaz_ggplot/galaaz_ggplot_files/figure-latex/midwest_rb.pdf +0 -0
- data/blogs/galaaz_ggplot/galaaz_ggplot_files/figure-latex/scatter_plot_rb.pdf +0 -0
- data/blogs/gknit/gknit.md +0 -1430
- data/blogs/gknit/gknit.tex +0 -1358
- data/blogs/manual/graph.rb +0 -29
- data/blogs/nse_dplyr/nse_dplyr.tex +0 -1373
- data/blogs/ruby_plot/ruby_plot.Rmd_external_figs +0 -662
- data/blogs/ruby_plot/ruby_plot_files/figure-html/dose_len.svg +0 -57
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facet_by_delivery.svg +0 -106
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facet_by_dose.svg +0 -110
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facets_by_delivery_color.svg +0 -174
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facets_by_delivery_color2.svg +0 -236
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facets_with_jitter.svg +0 -296
- data/blogs/ruby_plot/ruby_plot_files/figure-html/facets_with_points.svg +0 -236
- data/blogs/ruby_plot/ruby_plot_files/figure-html/final_box_plot.svg +0 -218
- data/blogs/ruby_plot/ruby_plot_files/figure-html/final_violin_plot.svg +0 -128
- data/blogs/ruby_plot/ruby_plot_files/figure-html/violin_with_jitter.svg +0 -150
- data/blogs/ruby_plot/ruby_plot_files/figure-latex/dose_len.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-latex/facet_by_delivery.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-latex/facet_by_dose.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-latex/facets_by_delivery_color.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-latex/facets_by_delivery_color2.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-latex/facets_with_decorations.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-latex/facets_with_jitter.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-latex/facets_with_points.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-latex/final_box_plot.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-latex/final_violin_plot.png +0 -0
- data/blogs/ruby_plot/ruby_plot_files/figure-latex/violin_with_jitter.png +0 -0
- data/examples/paper/paper.rb +0 -36
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---
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output:
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pdf_document:
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keep_tex: true
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fig_caption: yes
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latex_engine: pdflatex
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template: /home/rbotafogo/desenv/galaaz/sty/svm-r-markdown-templates/svm-latex-syllabus.tex
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geometry: margin=1in
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title: "POSC 0000: A Class with an R Markdown Syllabus"
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author: Steven V. Miller
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date: "Fall 2016"
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email: "svmille@clemson.edu"
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web: "svmiller.com/teaching"
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officehours: "W 09:00-11:30 a.m."
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office: "230A Brackett Hall"
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classroom: "*online*"
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classhours: "TR 02:00-03:45 p.m."
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fontfamily: mathpazo
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fontsize: 11pt
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header-includes:
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- \linespread{1.05}
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---
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```{ruby install, echo=FALSE}
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R.install_and_loads 'RefManageR'
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R.install_and_loads 'kfigr'
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```
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```{r setup, include=FALSE}
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knitr::opts_chunk$set(cache=FALSE, dev='pdf')
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mon <- as.Date("2016-08-15")
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# fri <- as.Date("2016-01-08")
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advdate <- function(obj, adv) {
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tmon <- obj + 7*(adv-1)
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tfri <- obj + 4 + 7*(adv-1)
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tmon <- format(tmon, format="%m/%d")
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tfri <- format(tfri, format="%m/%d")
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zadv <- sprintf("%02d", adv)
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tmp <- paste("Week ",zadv,sep='',", ", tmon," - ",tfri)
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return(tmp)
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}
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library(RefManageR)
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# library(knitcitations)
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# library(rcrossref)
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bib <- ReadBib("/home/rbotafogo/desenv/galaaz/examples/Bibliography/master.bib")
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myopts <- BibOptions(bib.style = "authoryear", style="latex", first.inits=FALSE, max.names = 20)
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```
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# Course Description
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You'll learn stuff in this class, I hope. Lorem ipsum dolor sit amet, consectetur adipiscing elit.
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Maecenas scelerisque elit sapien, eu consequat dui blandit in. Vestibulum dignissim feugiat
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mauris, at pretium turpis blandit nec. Aliquam porta scelerisque tortor, eget imperdiet quam
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dapibus et. Sed ut sollicitudin orci, id elementum arcu. Sed arcu quam, vestibulum molestie
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mattis sed, ultricies sed est. Phasellus eu nunc et urna volutpat pharetra. Donec interdum ante
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vitae odio malesuada blandit. Fusce at condimentum libero, eu elementum arcu. Aenean posuere
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id lorem in varius. Sed bibendum neque pretium dolor faucibus, in cursus ipsum suscipit.
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Lorem ipsum dolor sit amet, consectetur adipiscing elit. Aliquam erat volutpat. Phasellus
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mollis egestas risus, non maximus nisl euismod sit amet. Vestibulum laoreet et urna vitae
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rutrum. Donec quis dui elit.
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# Course Objectives
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1. You'll learn this
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2. And also that
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3. Perhaps some of this too.
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# Required Readings
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```{r, echo = FALSE, results="asis"}
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# bib["vasquez2009twp", "wagner2007ws"]
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```
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# Course Policy
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I will detail the policy for this course below. Basically, don't cheat and try to learn
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stuff. Don't be that guy.
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## Grading Policy
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- **20%** of your grade will be determined by a midterm during normal class hours.
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- **20%** of your grade will be determined by a term paper that documents your appreciation
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of Foghat's "Slow Ride", the most important song ever written. "Slow Ride" is what Mozart
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wishes *Don Giovanni* could have been.
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- **10%** of your grade will be determined by your attendance and participation in class.
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Generally, ask questions and answer them.
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- **20%** of your grade will be determined by a 20-page term paper on when exactly
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"The Love Boat" jumped the proverbial shark. You will address whether this shark-jumping
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can be attributed to Ted McGinley, the introduction of Jill Whelan as "Vicki", or some
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other cause.
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- **30%** of your grade will be determined by a final exam.
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## Attendance Policy
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```{r, include=FALSE}
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options(scipen=999)
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Attend <- read.csv("attend-grade-relationships.csv")
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M1 <- lm(rgrade ~ perattend, Attend)
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M2 <- lm(rgrade ~ perattend, data=subset(Attend, perattend >= 75))
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library(broom)
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M1df <- tidy(M1)
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library(ggplot2)
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library(kfigr)
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```
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> *Showing up is 80 percent of life* -- Woody Allen, [via Marshall Brickman](http://quoteinvestigator.com/2013/06/10/showing-up/#note-6553-1)
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Students should be weary of skipping class. I deduct *all* participation points for a class
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after five unexcused absences and this can have important implications for a student's
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overall grade in the class. There is already a strong positive correlation between the
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percentage of classes a student has attended in the course and the student's final grade for
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the semester (*r* = `r round(cor(Attend$perattend, Attend$rgrade, use="complete.obs"), 3)`) for
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all `r nrow(Attend)` students I have taught since Fall 2014.
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A simple linear regression of a student's final grade on percentage of classes attended for
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the semester for all classes I have taught since Fall 2014 suggests an increase of one percent
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in attendance for the semester leads to an estimated increase of `r round(M1$coefficients[2], 3)`
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in the student's final grade. Whereas one missed classes constitutes about a five-percent
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decrease in percentage attendance for the semester, one missed class means an estimated
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decrease of `r round(M1$coefficients[2], 3)*5` in the overall grade. The effect of attendance
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on the final grade for the class is precise (*t* = `r round(M1df$statistic[2], 3)`) and the
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likelihood that there is no actual relationship between attendance and final grade for the
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semester is almost zero. This simple linear model with just one predictor (attendance) provides
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a good fit as well (R$^2$ = `r round(summary(M1)$r.squared, 3)`). See
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`r figr("attendplot", TRUE, type="Figure")` in this document.
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```{r attendplot, dev = "png", echo = FALSE, results="asis", cache=FALSE, fig.cap="A Scatterplot of the Relationship between Class Attendance and Final Grade", fig.height=4, fig.pos="H"}
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Graph <- ggplot(Attend, aes(x = perattend, y = rgrade))
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Graph + geom_point() + labs(x="Percent Attendance in Class", y="Final Grade in Class (0-100)") +
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geom_smooth(method=lm)
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```
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A student might object that attendance is partly endogenous to a grade since past classes deducted
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all participation points after five unexcused absences. This is true, but the findings
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hold even when I subset the data to cases where attendance is greater than 75% (i.e.
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roughly the threshold below which I deduct all participation points). Students who just meet
|
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the threshold for full participation points nevertheless get an estimated decrease of
|
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`r round(M2$coefficients[2], 3)*5` in their overall grade for each missed class. This effect
|
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is also precise (*t* = `r round(M2df$statistic[2], 3)`). Put another way, we would have
|
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observed this effect in my data if there were no *true* effect of attendance on grades
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about `r round(summary(M2)$coefficients[2,4]*100000)` times in 100,000 "trials"
|
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(i.e. *p* = `r round(summary(M2)$coefficients[2,4], 5)`), on average. That probability is
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effectively zero. *Attend class*.
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+
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## Late Arrival of the Professor Policy
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My current university, from what I have been told, asks professors to have policies written
|
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into their syllabus about what students should do if the professor is more than 15 minutes
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late to class. This seems like an anachronism. I will inform students via e-mail in advance
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of class if class is cancelled for the day. I will also contact our department secretary if
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something happened on the way to work. Failing that, assume the worst happened to me. I ask
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the students make sure that my story gets the proper treatment on an *Investigation
|
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Discovery* show. I also ask that my story be narrated by Keith Morrison.
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## E-mail Policy
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I am usually quick to respond to student e-mails. However, student e-mails tend to do several
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things that try my patience. I have a new policy, effective Fall 2016, that outlines why I
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will not respond to certain e-mails students send. Multiple rationales follow.
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1. The student could answer his/her own inquiry by reading the syllabus.
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2. The student missed class for which there was no exam. I do not need to know the exact
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reason for a missed class. Students with excusable absences are responsible for giving me
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a note *in hard copy* that documents the reason for the missed class. An e-mail is
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unnecessary unless the impromptu absence involved missing a midterm or final.
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3. The student wants to know what topics s/he missed during a class s/he skipped. The answer
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is always "you missed what was on the syllabus."
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4. The student is protesting a grade without reference to specific points of objection.
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See the policy on protesting a grade in the syllabus. These e-mails tend to be expressive
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utility on the part of the student and do not require a response from me. Students interested
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in improving their knowledge of material should see me during office hours.
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5. The students wants to know how many classes s/he missed at some point during the semester.
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I assume the student has a better answer to that question than me until the end of the semester.
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6. The student is requesting an extension on an assignment for which the syllabus already
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established the deadline. The answer is always "no".
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7. The student is ["grade grubbing"](https://www.math.uh.edu/~tomforde/GradeGrubbing.html)
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or asking to round up a grade. The answer is always "no".
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8. The student is asking for an extra credit opportunity, a request that amounts to more
|
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grading for the professor. The answer is "no".
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+
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## Make-Up Exam Policy
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There are **NO** make-ups for missed exams. Don't bother asking.
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+
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## Academic Dishonesty Policy
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+
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Don’t cheat. Don’t be that guy. Yes, you. You know exactly what I’m talking about too.
|
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+
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## Disabilities Policy
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Federal law mandates the provision of services at the university-level to qualified
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students with disabilities. Make sure to include all that relevant information here.
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+
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\newpage
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+
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# Class Schedule
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Students must read the following before Tuesday's class session. Important: class readings
|
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are subject to change, contingent on mitigating circumstances and the progress we make as
|
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a class. Students are encouraged to attend lectures and check the course website for updates.
|
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+
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## `r advdate(mon, 1)`: Syllabus Day
|
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+
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*No class Thursday (Political scientists usually have a conference to start the semester).*
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+
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Read *all* associated documents on course website.
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+
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- [Taking Good Notes](http://svmiller.com/blog/2014/09/taking-good-notes/)
|
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+
- [Dos and Dont's of Writing for Students](http://svmiller.com/blog/2015/06/dos-and-donts-of-writing-for-students/)
|
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+
- [Assorted Tips for Students on Writing Research Papers](http://svmiller.com/blog/2015/12/assorted-tips-students-research-papers/)
|
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- [Exam Grading Policy](https://www.dropbox.com/s/apihjs7di81aqcv/svm-exam-grading-policy.pdf?dl=0)
|
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- [Fun with Attendance and Grades (i.e. Students Should Attend Class)](http://svmiller.com/blog/2016/05/fun-with-attendance-grades/)
|
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+
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+
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## `r advdate(mon, 2)`: The First Topic Where We Read John Vasquez
|
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+
|
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```{r, echo = FALSE, results="asis"}
|
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# bib[author = "vasquez"]
|
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|
+
```
|
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+
|
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## `r advdate(mon, 3)`: Read the Nos. 90-97 Items in My Bib
|
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+
|
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|
+
```{r, echo = FALSE, results="asis", eval=F}
|
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+
bib[90:97]
|
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|
+
```
|
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+
|
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|
+
*Your "Slow Ride" appreciation paper is due in Thursday's class*.
|
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|
+
|
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|
+
## `r advdate(mon, 4)`: Read Bib Item No. 120
|
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|
+
|
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|
+
```{r, echo = FALSE, results="asis", eval=F}
|
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+
bib[120]
|
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|
+
```
|
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|
+
|
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+
|
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+
|
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|
+
## `r advdate(mon, 5)`: The Fourth Topic with Bib Item No. 510
|
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|
+
|
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|
+
```{r, echo = FALSE, results="asis", eval=F}
|
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|
+
bib[510]
|
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|
+
```
|
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|
+
|
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|
+
## `r advdate(mon, 6)`: Keep
|
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|
+
## `r advdate(mon, 7)`: Going
|
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|
+
## `r advdate(mon, 8)`: Down
|
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|
+
|
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|
+
## `r advdate(mon, 9)`: the
|
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|
+
|
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|
+
## `r advdate(mon, 10)`: Line
|
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|
+
|
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|
+
## `r advdate(mon, 11)`: Until
|
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|
+
|
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|
+
## `r advdate(mon, 12)`: You
|
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|
+
|
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|
+
## `r advdate(mon, 13)`: Are
|
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|
+
|
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|
+
## `r advdate(mon, 14)`: Done
|
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|
+
|
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|
+
## `r advdate(mon, 15)`: with
|
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|
+
|
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|
+
|
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|
+
## `r advdate(mon, 16)`: your
|
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|
+
|
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|
+
|
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|
+
## `r advdate(mon, 17)`: Syllabus
|
Binary file
|
@@ -0,0 +1,386 @@
|
|
1
|
+
---
|
2
|
+
title: "Steve's Xaringan Presentation"
|
3
|
+
subtitle: "POSC 0000 -- It Would Be Cool If This Were an Actual Class Presentation"
|
4
|
+
author: "Steven V. Miller<br /> <br /> <br /> Department of Political Science"
|
5
|
+
institute: Department of Political Science
|
6
|
+
output:
|
7
|
+
xaringan::moon_reader:
|
8
|
+
css: ["default", "~/desenv/galaaz/sty/svm-xaringan-style.css"]
|
9
|
+
lib_dir: libs
|
10
|
+
nature:
|
11
|
+
highlightStyle: github
|
12
|
+
highlightLines: true
|
13
|
+
countIncrementalSlides: false
|
14
|
+
---
|
15
|
+
|
16
|
+
```{r setup, include=FALSE}
|
17
|
+
options(htmltools.dir.version = FALSE)
|
18
|
+
knitr::opts_chunk$set(dev = 'svg')
|
19
|
+
options(device = function(file, width, height) {
|
20
|
+
svg(tempfile(), width = width, height = height)
|
21
|
+
})
|
22
|
+
library(tidyverse)
|
23
|
+
library(stevemisc)
|
24
|
+
```
|
25
|
+
|
26
|
+
|
27
|
+
|
28
|
+
# Install Xaringan First
|
29
|
+
|
30
|
+
Install the **xaringan** package from [Github](https://github.com/yihui/xaringan):
|
31
|
+
|
32
|
+
```{r eval=FALSE, tidy=FALSE}
|
33
|
+
devtools::install_github("yihui/xaringan")
|
34
|
+
```
|
35
|
+
|
36
|
+
|
37
|
+
You are recommended to use the [RStudio IDE](https://www.rstudio.com/products/rstudio/), but you do not have to.
|
38
|
+
|
39
|
+
- Create a new R Markdown document from the menu `File -> New File -> R Markdown -> From Template -> Ninja Presentation`;<sup>1</sup>
|
40
|
+
- Click the `Knit` button to compile it.
|
41
|
+
|
42
|
+
---
|
43
|
+
|
44
|
+
# remark.js Maximizes the Presentation Value
|
45
|
+
|
46
|
+
Press `h` or `?` to see controls you have in remark.js.
|
47
|
+
|
48
|
+
Hit `Esc` to exit that screen.
|
49
|
+
|
50
|
+
|
51
|
+
|
52
|
+
---
|
53
|
+
|
54
|
+
class: center, middle
|
55
|
+
|
56
|
+
# You can do this to your slides if you want
|
57
|
+
## Add `class: center, middle` to the start of your slide.
|
58
|
+
### Perhaps you want the appearance of a secondary title slide, which is what this will do.
|
59
|
+
|
60
|
+
For example, check this out...
|
61
|
+
|
62
|
+
---
|
63
|
+
|
64
|
+
class: center, middle
|
65
|
+
|
66
|
+
# Pop Music and Political Science
|
67
|
+
## POSC 0000 -- It Would Be Cool If This Were an Actual Class Presentation
|
68
|
+
### I am not funny and you will be forgiven for thinking of me as impossibly uncool.
|
69
|
+
|
70
|
+
|
71
|
+
|
72
|
+
---
|
73
|
+
|
74
|
+
# Sheena Easton and Total Conflict
|
75
|
+
|
76
|
+
Sheena Easton describes the following scenario for her baby:
|
77
|
+
|
78
|
+
- Takes the morning train
|
79
|
+
- Works from nine 'til five
|
80
|
+
- Takes another train home again
|
81
|
+
- Finds Sheena Easton waiting for him
|
82
|
+
|
83
|
+
--
|
84
|
+
|
85
|
+
Sheena Easton and her baby are playing a **zero-sum (total conflict)** game.
|
86
|
+
|
87
|
+
- Akin to Holmes-Moriarty game (see: von Neumann and Morgenstern), or "matching pennies."
|
88
|
+
- Useful for modeling strategic counterterrorism dilemmas between a government and terrorist group.
|
89
|
+
|
90
|
+
|
91
|
+
---
|
92
|
+
|
93
|
+
# A Total Conflict Between Sheena Easton and Her Baby
|
94
|
+
|
95
|
+
| | Sheena Easton Stays Home | Sheena Easton Goes to Baby's Work |
|
96
|
+
|-------------------------|---------------------|------------------|
|
97
|
+
| **Baby Home Again** | -100, **100** | **100**, 0 |
|
98
|
+
| **Baby Stays at Work** | **50**, 0 | -100, **100** |
|
99
|
+
|
100
|
+
--
|
101
|
+
|
102
|
+
<br />
|
103
|
+
|
104
|
+
Notice we have no pure strategies, and no Nash equilibrium.
|
105
|
+
|
106
|
+
- Sheena Easton wants to proverbially "match pennies."
|
107
|
+
- Her baby has diametrically opposed preferences, fearing for his safety.
|
108
|
+
|
109
|
+
Solution: mixed strategy.
|
110
|
+
|
111
|
+
---
|
112
|
+
background-image: url(https://media.giphy.com/media/dqZSIfquVhSg0/giphy.gif)
|
113
|
+
background-position: 50% 50%
|
114
|
+
background-size: 100%
|
115
|
+
class: center, bottom, fullscale
|
116
|
+
|
117
|
+
# Run...
|
118
|
+
|
119
|
+
---
|
120
|
+
|
121
|
+
# Congressman Astley's Re-election Platform
|
122
|
+
|
123
|
+
Assume Congressman Astley presides over a competitive district in which he seeks reappointment. He promises he's:
|
124
|
+
|
125
|
+
- Never gonna give you up.
|
126
|
+
- Never gonna let you down.
|
127
|
+
- Never gonna run around and desert you.
|
128
|
+
- Never gonna make you cry.
|
129
|
+
- Never gonna say goodbye.
|
130
|
+
- Never gonna tell a lie and hurt you.
|
131
|
+
|
132
|
+
Are these promises (if credible) sufficient to secure re-election?
|
133
|
+
|
134
|
+
---
|
135
|
+
|
136
|
+
```{r, eval = T, echo = F, fig.width=11, fig.height = 8, message=F, dev='svg', fig.cap = "SDFSFDSFS"}
|
137
|
+
|
138
|
+
df <- data.frame(x = rnorm(1000))
|
139
|
+
x <- df$x
|
140
|
+
|
141
|
+
ggplot(df, aes(x)) +
|
142
|
+
theme_steve_web() +
|
143
|
+
stat_function(fun = dnorm, colour = "black") +
|
144
|
+
scale_x_continuous(limits = c(-4, 4),
|
145
|
+
breaks = c(-4, 0, 4),
|
146
|
+
labels = c("Complete\nEmotional\nNeglect",
|
147
|
+
"Never Gonna Give You Up\nLet You Down\nRun Around and Desert You\n(Preference of Median Voter)",
|
148
|
+
"Maximum\nEmotional\nSupport")) +
|
149
|
+
geom_vline(xintercept = 0) +
|
150
|
+
geom_vline(xintercept = 1, linetype="dashed") +
|
151
|
+
geom_vline(xintercept = -2, linetype = "dashed") +
|
152
|
+
geom_vline(xintercept = -.5, linetype = "dotted") +
|
153
|
+
scale_y_continuous(limits = c(0, .5), breaks = NULL, label=NULL) +
|
154
|
+
xlab("A Unidimensional Continuum of the Policy Space of Emotional Support") +
|
155
|
+
ylab("") +
|
156
|
+
stat_function(fun = dnorm,
|
157
|
+
xlim = c(-4,-2),
|
158
|
+
size=0,
|
159
|
+
geom = "area", fill="#f8766d", alpha=1) +
|
160
|
+
stat_function(fun = dnorm,
|
161
|
+
xlim = c(1, 4),
|
162
|
+
size=0,
|
163
|
+
geom = "area", fill="#619cff", alpha=1) +
|
164
|
+
stat_function(fun = dnorm,
|
165
|
+
xlim = c(-.5, 1),
|
166
|
+
size=0,
|
167
|
+
geom = "area", fill="#619cff", alpha=.4) +
|
168
|
+
stat_function(fun = dnorm,
|
169
|
+
xlim = c(-2, -.5),
|
170
|
+
size=0,
|
171
|
+
geom = "area", fill="#f8766d", alpha=.4) +
|
172
|
+
annotate("text", label="Astley's rival is promising\nfar less in the (public?) good\nof emotional support",
|
173
|
+
size = 3.5, family="Open Sans",
|
174
|
+
x = -2.1, y = .4,
|
175
|
+
hjust = 1) +
|
176
|
+
annotate("text",
|
177
|
+
label="Congressman Astley is pledging\nmore emotional support\n(i.e. never gonna make you cry/say goodbye/tell a lie/hurt you)\nthan most his constituents want",
|
178
|
+
size = 3.5, family="Open Sans",
|
179
|
+
x = 1.1, y = .4,
|
180
|
+
hjust = 0) +
|
181
|
+
annotate("text",
|
182
|
+
label="Preferences\ncloser to\nAstley's\nrival",
|
183
|
+
size = 3.5, family="Open Sans",
|
184
|
+
x = -1.2, y = .45,
|
185
|
+
hjust = .5) +
|
186
|
+
annotate("text",
|
187
|
+
label="Preferences\ncloser to\nCongressman\nAstley",
|
188
|
+
size = 3.5, family="Open Sans",
|
189
|
+
x = .5, y = .45,
|
190
|
+
hjust = .5) +
|
191
|
+
labs(title = "Median Voter Theorem Suggests Congressman Astley Secures Re-election Against His Rival",
|
192
|
+
subtitle = "Assuming a unidimensional policy space and single-peaked preferences, Congressman Astley is closer to the median voter than his rival and wins the election.") +
|
193
|
+
geom_hline(yintercept = 0) +
|
194
|
+
geom_vline(xintercept = -4)
|
195
|
+
|
196
|
+
|
197
|
+
|
198
|
+
|
199
|
+
```
|
200
|
+
|
201
|
+
---
|
202
|
+
background-image: url(https://media.giphy.com/media/Vuw9m5wXviFIQ/giphy.gif)
|
203
|
+
background-position: 50% 50%
|
204
|
+
background-size: 100%
|
205
|
+
class: center, bottom, fullscale
|
206
|
+
|
207
|
+
# Re-election Dance
|
208
|
+
|
209
|
+
|
210
|
+
|
211
|
+
---
|
212
|
+
|
213
|
+
# Caribbean Queen and Operation Urgent Fury
|
214
|
+
|
215
|
+
.pull-left[
|
216
|
+
|
217
|
+
Billy Ocean released "Caribbean Queen" in 1984.
|
218
|
+
|
219
|
+
- Emphasized sharing the same dream
|
220
|
+
- Hearts beating as one
|
221
|
+
|
222
|
+
"Caribbean Queen" is about the poor execution of Operation Urgent Fury.
|
223
|
+
|
224
|
+
- Coordination problems plagued its execution from the start.
|
225
|
+
- Echoed JCS chairman David Jones' frustrations with military establishment.
|
226
|
+
]
|
227
|
+
|
228
|
+
.pull-right[
|
229
|
+
|
230
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+
![](http://wearethemighty.wpengine.netdna-cdn.com/wp-content/uploads/2016/05/GrenadaNewsCartoon.jpg)
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*This seriously happened, btw..*
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]
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Billy Ocean is advocating for what became the Goldwater-Nichols Act.
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- Wanted to take advantage of **economies of scale**, resolve **coordination problems** in U.S. military.
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+
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---
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background-image: url(https://i.makeagif.com/media/9-05-2015/auHafh.gif)
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background-position: 50% 50%
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background-size: 100%
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class: center, bottom, fullscale
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# The military establishment was the tiger we wanted to tame all along.
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+
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+
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---
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+
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# The Good Day Hypothesis
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We know the following about Ice Cube's day.
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1. The Lakers beat the Supersonics.
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2. No helicopter looked for a murder.
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3. Consumed Fatburger at 2 a.m.
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4. Goodyear blimp: "Ice Cube's a pimp."
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+
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--
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+
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This leads to two different hypotheses:
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- $H_0$: Ice Cube's day is statistically indistinguishable from a typical day.
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- $H_1$: Ice Cube is having a good day.
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+
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These hypotheses are tested using archival data from Ice Cube's life to estimate an item response model of the "goodness" of Ice Cube's days.
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+
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---
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+
```{r, eval = T, echo = F, fig.width=11, fig.height = 8, message=F, dev='svg', fig.cap = "SDFSFDSFS"}
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interval1 <- -qnorm((1-0.9)/2) # 90% multiplier
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interval2 <- -qnorm((1-0.95)/2) # 95% multiplier
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+
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+
tribble(
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~variable, ~est, ~se,
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"Latent Estimate of\nIce Cube's Day", 1.6, .231
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+
) %>%
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+
ggplot(.) + theme_steve_web() +
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+
geom_hline(yintercept = .5, color = "red", lty=2) +
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+
geom_linerange(aes(x = variable, ymin = est - se*interval1,
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+
ymax = est + se*interval1),
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+
lwd = 1, position = position_dodge(width = 1/2)) +
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geom_pointrange(aes(x = variable, y = est, ymin = est - se*interval2,
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+
ymax = est + se*interval2),
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+
lwd = 1/2, position = position_dodge(width = 1/2),
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+
fill = "WHITE") +
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+
coord_flip() + xlab("") + ylab("Latent Estimate") +
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+
labs(title = "Latent Estimates from Ice Cube's Archives Lend Support to the 'Good Day' Hypothesis",
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subtitle = "Latent estimates are drawn from an item response model of indicators of the quality of Ice Cube's days. These include whether he had to use his A.K.",
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caption = "Data: Ice Cube's Archives, obviously fictional. Red value of .5 indicate likelihood of 'good day.'")
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+
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293
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+
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+
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+
```
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+
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---
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+
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background-image: url(https://media.giphy.com/media/cgh25bl5dgK3u/giphy.gif)
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background-position: 50% 50%
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+
background-size: 100%
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+
class: center, bottom, fullscale
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+
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+
---
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305
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+
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+
class: center, middle
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+
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+
# You Can Do Other Stuff in Xaringan Too
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309
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+
## POSC 0000 -- It Would Be Cool If This Were an Actual Class Presentation
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+
### I might use it mostly for the ability to put GIFs in class presentations, but it's flexible enough to do almost anything.
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+
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+
---
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313
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+
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314
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+
Show some R code and execute it if you'd like.
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+
|
316
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+
```{r}
|
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+
pi
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318
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+
|
319
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+
3+5
|
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|
+
|
321
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+
rnorm(10)
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|
+
|
323
|
+
```
|
324
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+
|
325
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+
|
326
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+
---
|
327
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+
|
328
|
+
Here's a simple ultimatum game, a la Fearon (1995). Done via `DiagrammeR`.
|
329
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+
|
330
|
+
```{r, echo=F, eval=T}
|
331
|
+
library(DiagrammeR)
|
332
|
+
grViz("
|
333
|
+
digraph {
|
334
|
+
# Multiple level nodes
|
335
|
+
node [shape = square, color=CornflowerBlue]
|
336
|
+
A [label = 'A'];
|
337
|
+
0 [label = '0', shape = none];
|
338
|
+
B [label = 'B'];
|
339
|
+
1 [label = '1', shape = none];
|
340
|
+
Accept [label = '1 - x, x', shape = none];
|
341
|
+
N;
|
342
|
+
Awins [shape = none, label = '1 - k, k'];
|
343
|
+
Bwins [shape = none, label = '-k, 1 - k']
|
344
|
+
|
345
|
+
|
346
|
+
|
347
|
+
# Connect nodes with edges and labels
|
348
|
+
A -> 0 [arrowhead= none]
|
349
|
+
A -> B
|
350
|
+
A -> 1 [arrowhead = none]
|
351
|
+
B -> Accept [headlabel = 'Accept', labeldistance = 5, labelangle=75]
|
352
|
+
B -> N [label = ' Reject']
|
353
|
+
N -> Awins [headlabel = 'A wins (1 - p)', labeldistance=4.5 ,
|
354
|
+
labelangle=75]
|
355
|
+
N -> Bwins [label = 'B wins (p)']
|
356
|
+
}
|
357
|
+
|
358
|
+
[1]: 'A'
|
359
|
+
[2]: '0'
|
360
|
+
[3]: paste0('Model 3\\n Split 3')
|
361
|
+
[4]: paste0('Model 6\\n Split 4')
|
362
|
+
")
|
363
|
+
|
364
|
+
```
|
365
|
+
|
366
|
+
---
|
367
|
+
|
368
|
+
# Conclusion
|
369
|
+
|
370
|
+
Xaringan is a nifty Rstudio add-on/package for creating HTML presentations.
|
371
|
+
|
372
|
+
- I think I'm still more inclined toward Beamer but Xaringan has tons of flexibility.
|
373
|
+
- Have an interactive component to your presentation (e.g. `leaflet` or a Shiny app)? You probably want Xaringan.
|
374
|
+
|
375
|
+
Plus, you can put GIFs into your presentation with Xaringan. That's nifty. Maybe students will like that.
|
376
|
+
|
377
|
+
|
378
|
+
|
379
|
+
---
|
380
|
+
|
381
|
+
background-image: url(https://i.imgur.com/IHeUeZ9.gif)
|
382
|
+
background-position: 50% 50%
|
383
|
+
background-size: 100%
|
384
|
+
class: center, bottom, fullscale
|
385
|
+
|
386
|
+
Questions? Hate mail? Stay out of my mentions @stevenvmiller
|